ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags15i03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U73216.1|TAU73216 Triticum aestivum cold acclimation protein WCOR413 (Wcor413) mRNA, complete cds Length = 896 Score = 583 bits (294), Expect = e-163 Identities = 389/421 (92%) Strand = Plus / Minus Query: 291 ctacaggaaccacatcacgatggcccagaccgggtagatgaagagcaggaggatgccgat 350 ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 696 ctacaggaaccacatgacgacggcccagaccgggtagatgaagaggaggaggatgccgat 637 Query: 351 ggtgttggaccatccattggccttctggaaggcctccttgaggcctcctgacgccttgat 410 |||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 636 ggtgttggaccagccattgggcttctggaaggcctccttgaggccccccgacgccttgat 577 Query: 411 gtgctcgtggagcaggtagcacccgatgaccaggcatacggcgacgccgatgatgagcca 470 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 576 gtgctcgtggagcaggtagcacccgatgaccaggcacacgccgacgccgatgatgagcca 517 Query: 471 cgagcccctgaaggtgtccgcgaagatgctgggggcgaccgccgtcaggaggatcagaga 530 ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| Sbjct: 516 ggagcccctgaaggtgtccgcgaagatggcgggggcgaccaccgtgaggaggatcagaga 457 Query: 531 gccaggcagctctagccaatcagggaagtggcgcggaaagaatagccgcaggaccacaac 590 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 456 gccaggcagctccagccaatcagggaagtggcgtggaaagaacagccgcaggacgacaac 397 Query: 591 aacgaacgcgatccagctaccaatctccccccttataaaggagaagagcagagaaggcat 650 ||||||||| ||||| ||||||||| |||||||| ||| |||||||||| ||||| Sbjct: 396 aacgaacgcaatccaagcaccaatctctccccttatgaagccgaagagcagaccgggcat 337 Query: 651 ggtgaagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagttcgtctt 710 ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 336 ggtgaagaaaatgtaagggaccaagaggcccgtcagcatgttggtcttccagttcgtctt 277 Query: 711 g 711 | Sbjct: 276 g 276 Score = 73.8 bits (37), Expect = 7e-10 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 86 aacagagcagacgtttttattgat-gttatgtacgcacagatcaaggaaacaaattaagc 144 |||||||||||||||||||||||| | ||||||| |||||||| |||||||||| |||| Sbjct: 887 aacagagcagacgtttttattgatggctatgtacccacagatccaggaaacaaactaaga 828 Query: 145 agtggcaccaaat 157 ||| |||||||| Sbjct: 827 cgtgacaccaaat 815
>gb|AY057118.1| Triticum aestivum cold acclimation protein WCOR413-like protein beta form mRNA, complete cds Length = 993 Score = 168 bits (85), Expect = 2e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 477 cctgaaggtgtccgcgaagatgctgggggcgaccgccgtcaggaggatcagagagccagg 536 ||||||| ||| ||||||| ||||||||||||| |||| || || |||||||||||||| Sbjct: 511 cctgaagtggtcggcgaagaggctgggggcgaccaccgtgagaagaatcagagagccagg 452 Query: 537 cagctctagccaatcagggaagtggcgcggaaagaatagccgcaggaccacaacaacgaa 596 ||||| |||||||||||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 451 cagctttagccaatcagggaagtgacgcgggaagaagagccgcaggatgaatacaacgaa 392 Query: 597 cgcgatccagctaccaatctccccccttataaaggagaagagcagagaaggcatggtgaa 656 || |||||| ||||| ||| ||||||| | ||||| |||| | ||||| |||||| Sbjct: 391 tgcaatccaggcaccaacctctccccttacgagagagaacagcacaccaggcagggtgaa 332 Query: 657 gaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||| ||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 331 gaatatgtaagggaccaagagtccggtcagcatgttggtcttccagtt 284 Score = 133 bits (67), Expect = 9e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 314 cccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggcct 373 ||||||| ||||| | ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 668 cccagactgggtaaacgaagagcaggacgatgccgatggtgttggacacgccattggcct 609 Query: 374 tctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagcacc 433 || |||||||||| ||| |||||||||| || |||||||||| || ||||||||||||| Sbjct: 608 tcctgaaggcctccctgaagcctcctgacaccctgatgtgctcttgaagcaggtagcacc 549 Query: 434 cgatgaccaggcata 448 ||||| | ||||||| Sbjct: 548 cgatggcgaggcata 534 Score = 44.1 bits (22), Expect = 0.62 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 98 gtttttattgatg-ttatgtacgcacagatcaaggaaacaaa 138 |||||||||||| |||||||| |||| |||||||||||||| Sbjct: 950 gtttttattgataattatgtacccacaaatcaaggaaacaaa 909 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 ttatgtacgcacagatcaaggaaacaaa 138 |||||||| |||| |||||||||||||| Sbjct: 902 ttatgtacccacaaatcaaggaaacaaa 875
>gb|BT017742.1| Zea mays clone EL01N0449E04.c mRNA sequence Length = 1064 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| | Sbjct: 715 ggcccagacagggtagatgaagagcaggaggatgccgatggagttggacacaccattgcc 656 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||||||||||| || |||||||||||||| Sbjct: 655 cttcctgaaggcgttcctgaatccacctgacgccttgatgtgttcttggagcaggtagca 596 Query: 432 cccgatgaccaggcata 448 ||||| || ||||||| Sbjct: 595 tccgatcacaaggcata 579 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 475 cccctgaaggtgtccgcgaagatgctgggggcgaccgccgtcaggaggatcagagagcca 534 ||||||||| |||||||||| | ||| ||||||||| | || || ||||| | || ||| Sbjct: 558 cccctgaagctgtccgcgaacaggctaggggcgaccactgtgagcaggatgatggaacca 499 Query: 535 ggcagctctagccaatcagggaagtggcgcggaaagaatagccgcag 581 || ||||||| |||||| |||||||| || ||||||||||| ||||| Sbjct: 498 ggaagctctaaccaatctgggaagtgtcgtggaaagaatagacgcag 452 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 645 aggcatggtgaagaaaatgtatgggaccaagagacccgtcagcatgttggtctt 698 ||||| ||||||||||||||| || ||||||||| | ||||||||||||||||| Sbjct: 388 aggcagggtgaagaaaatgtaaggaaccaagagagctgtcagcatgttggtctt 335
>gb|AY181208.1| Zea mays cold acclimation protein COR413-PM1 mRNA, complete cds Length = 1126 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| | Sbjct: 687 ggcccagacagggtagatgaagagcaggaggatgccgatggagttggacacaccattgcc 628 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||||||||||| || |||||||||||||| Sbjct: 627 cttcctgaaggcgttcctgaatccacctgacgccttgatgtgttcttggagcaggtagca 568 Query: 432 cccgatgaccaggcata 448 ||||| || ||||||| Sbjct: 567 tccgatcacaaggcata 551 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 475 cccctgaaggtgtccgcgaagatgctgggggcgaccgccgtcaggaggatcagagagcca 534 ||||||||| |||||||||| | ||| ||||||||| | || || ||||| | || ||| Sbjct: 530 cccctgaagctgtccgcgaacaggctaggggcgaccactgtgagcaggatgatggaacca 471 Query: 535 ggcagctctagccaatcagggaagtggcgcggaaagaatagccgcag 581 || ||||||| |||||| |||||||| || ||||||||||| ||||| Sbjct: 470 ggaagctctaaccaatctgggaagtgtcgtggaaagaatagacgcag 424 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 645 aggcatggtgaagaaaatgtatgggaccaagagacccgtcagcatgttggtctt 698 ||||| ||||||||||||||| || ||||||||| | ||||||||||||||||| Sbjct: 360 aggcagggtgaagaaaatgtaaggaaccaagagagctgtcagcatgttggtctt 307
>gb|AY106041.1| Zea mays PCO103483 mRNA sequence Length = 1220 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| | Sbjct: 875 ggcccagacagggtagatgaagagcaggaggatgccgatggagttggacacaccattgcc 816 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||||||||||| || |||||||||||||| Sbjct: 815 cttcctgaaggcgttcctgaatccacctgacgccttgatgtgttcttggagcaggtagca 756 Query: 432 cccgatgaccaggcata 448 ||||| || ||||||| Sbjct: 755 tccgatcacaaggcata 739 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 475 cccctgaaggtgtccgcgaagatgctgggggcgaccgccgtcaggaggatcagagagcca 534 ||||||||| |||||||||| | ||| ||||||||| | || || ||||| | || ||| Sbjct: 718 cccctgaagctgtccgcgaacaggctaggggcgaccactgtgagcaggatgatggaacca 659 Query: 535 ggcagctctagccaatcagggaagtggcgcggaaagaatagccgcag 581 || ||||||| |||||| |||||||| || ||||||||||| ||||| Sbjct: 658 ggaagctctaaccaatctgggaagtgtcgtggaaagaatagacgcag 612 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 645 aggcatggtgaagaaaatgtatgggaccaagagacccgtcagcatgttggtctt 698 ||||| ||||||||||||||| || ||||||||| | ||||||||||||||||| Sbjct: 548 aggcagggtgaagaaaatgtaaggaaccaagagagctgtcagcatgttggtctt 495
>ref|XM_469914.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1118 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 746 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 687 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 686 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 627 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 626 tccaatgatgaggcata 610 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 409 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 360 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 532 ccaggcagctctagccaatcagggaagtggcgcggaaagaa 572 ||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 532 ccaggcagctctaaccaatcagggaaatggcgaggaaagaa 492
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 31488963 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 31488904 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 31488903 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 31488844 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 31488843 tccaatgatgaggcata 31488827 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 31488138 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 31488089
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Plus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 103633 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 103692 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 103693 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 103752 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 103753 tccaatgatgaggcata 103769 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 104458 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 104507
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Plus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 6837 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 6896 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 6897 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 6956 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 6957 tccaatgatgaggcata 6973 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 7662 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 7711
>gb|AF283006.1| Oryza sativa (japonica cultivar-group) cold acclimation protein WCOR413-like protein mRNA, complete cds Length = 1057 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 719 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 660 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 659 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 600 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 599 tccaatgatgaggcata 583 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 382 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 333 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 532 ccaggcagctctagccaatcagggaagtggcgcggaaagaa 572 ||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 505 ccaggcagctctaaccaatcagggaaatggcgaggaaagaa 465
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 31579479 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 31579420 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 31579419 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 31579360 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 31579359 tccaatgatgaggcata 31579343 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 31578654 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 31578605
>dbj|AK066036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049B03, full insert sequence Length = 1116 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 743 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 684 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 683 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 624 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 623 tccaatgatgaggcata 607 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 406 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 357 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 532 ccaggcagctctagccaatcagggaagtggcgcggaaagaa 572 ||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 529 ccaggcagctctaaccaatcagggaaatggcgaggaaagaa 489
>dbj|AK060906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F05, full insert sequence Length = 1031 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 715 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 656 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 655 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 596 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 595 tccaatgatgaggcata 579 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 378 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 329 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 532 ccaggcagctctagccaatcagggaagtggcgcggaaagaa 572 ||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 501 ccaggcagctctaaccaatcagggaaatggcgaggaaagaa 461
>dbj|AK060000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G09, full insert sequence Length = 1061 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 312 ggcccagaccgggtagatgaagagcaggaggatgccgatggtgttggaccatccattggc 371 ||||||||| |||||||||||||||| ||||||||| ||| |||||||| ||| ||| | Sbjct: 763 ggcccagacagggtagatgaagagcaagaggatgccaatgctgttggacactccgttgcc 704 Query: 372 cttctggaaggcctccttgaggcctcctgacgccttgatgtgctcgtggagcaggtagca 431 |||| |||||| | | ||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 703 cttcctgaaggcgttcctgaatccacctgacgccctgatgtgctcttgaagcaggtagca 644 Query: 432 cccgatgaccaggcata 448 || |||| ||||||| Sbjct: 643 tccaatgatgaggcata 627 Score = 69.9 bits (35), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 655 aagaaaatgtatgggaccaagagacccgtcagcatgttggtcttncagtt 704 ||||||||||| |||||||||||| | ||||||||||||||||| ||||| Sbjct: 426 aagaaaatgtaagggaccaagagagcggtcagcatgttggtcttccagtt 377 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 532 ccaggcagctctagccaatcagggaagtggcgcggaaagaa 572 ||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 549 ccaggcagctctaaccaatcagggaaatggcgaggaaagaa 509
>gb|AY112320.1| Zea mays CL360_-2 mRNA sequence Length = 661 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 398 ctgacgccttgatgtgctcgtggagcaggtagcacccgat 437 |||||||| |||||||||| |||||||||||||| ||||| Sbjct: 262 ctgacgccctgatgtgctcttggagcaggtagcatccgat 223 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 315 ccagaccgggtagatgaagagcaggaggatgcc 347 |||||| |||||||||||||| ||||||||||| Sbjct: 345 ccagacagggtagatgaagagtaggaggatgcc 313 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 538 agctctagccaatcagggaagtggcgcgg 566 ||||||| |||||| |||||||||||||| Sbjct: 128 agctctaaccaatctgggaagtggcgcgg 100
>gb|AC122091.6| Rattus norvegicus 9 BAC CH230-375L16 (Children's Hospital Oakland Research Institute) complete sequence Length = 231967 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 acagatcaaggaaacaaattaagcag 146 |||||||| ||||||||||||||||| Sbjct: 137253 acagatcatggaaacaaattaagcag 137278
>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland Research Institute) complete sequence Length = 217001 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 121 acagatcaaggaaacaaattaagcag 146 |||||||| ||||||||||||||||| Sbjct: 185443 acagatcatggaaacaaattaagcag 185418
>gb|AC163735.5| Pan troglodytes BAC clone CH251-576O12 from chromosome unknown, complete sequence Length = 214676 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 654 gaagaaaatgtatgggaccaag 675 |||||||||||||||||||||| Sbjct: 85878 gaagaaaatgtatgggaccaag 85857
>gb|AC130464.3| Homo sapiens chromosome 16 clone CTA-88D1, complete sequence Length = 162516 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 654 gaagaaaatgtatgggaccaag 675 |||||||||||||||||||||| Sbjct: 60249 gaagaaaatgtatgggaccaag 60228
>emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 in linkage group 4, complete sequence Length = 216208 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gtagatgaagagcaggaggatg 345 |||||||||||||||||||||| Sbjct: 35040 gtagatgaagagcaggaggatg 35061 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gtagatgaagagcaggaggatg 345 |||||||||||||||||||||| Sbjct: 34183 gtagatgaagagcaggaggatg 34204 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gtagatgaagagcaggaggatg 345 |||||||||||||||||||||| Sbjct: 32508 gtagatgaagagcaggaggatg 32529 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gtagatgaagagcaggaggatg 345 |||||||||||||||||||||| Sbjct: 31038 gtagatgaagagcaggaggatg 31059 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35279 tagatgaagagcaggaggatg 35299 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35245 tagatgaagagcaggaggatg 35265 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35211 tagatgaagagcaggaggatg 35231 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35177 tagatgaagagcaggaggatg 35197 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35143 tagatgaagagcaggaggatg 35163 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35109 tagatgaagagcaggaggatg 35129 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 35075 tagatgaagagcaggaggatg 35095 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34590 tagatgaagagcaggaggatg 34610 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34558 tagatgaagagcaggaggatg 34578 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34524 tagatgaagagcaggaggatg 34544 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34490 tagatgaagagcaggaggatg 34510 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34456 tagatgaagagcaggaggatg 34476 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34422 tagatgaagagcaggaggatg 34442 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34388 tagatgaagagcaggaggatg 34408 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34354 tagatgaagagcaggaggatg 34374 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34320 tagatgaagagcaggaggatg 34340 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34286 tagatgaagagcaggaggatg 34306 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34252 tagatgaagagcaggaggatg 34272 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 34218 tagatgaagagcaggaggatg 34238 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33733 tagatgaagagcaggaggatg 33753 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33699 tagatgaagagcaggaggatg 33719 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33665 tagatgaagagcaggaggatg 33685 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33631 tagatgaagagcaggaggatg 33651 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33597 tagatgaagagcaggaggatg 33617 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33563 tagatgaagagcaggaggatg 33583 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33529 tagatgaagagcaggaggatg 33549 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33495 tagatgaagagcaggaggatg 33515 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33461 tagatgaagagcaggaggatg 33481 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33427 tagatgaagagcaggaggatg 33447 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33393 tagatgaagagcaggaggatg 33413 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33359 tagatgaagagcaggaggatg 33379 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33325 tagatgaagagcaggaggatg 33345 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33291 tagatgaagagcaggaggatg 33311 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33257 tagatgaagagcaggaggatg 33277 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33223 tagatgaagagcaggaggatg 33243 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33189 tagatgaagagcaggaggatg 33209 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33155 tagatgaagagcaggaggatg 33175 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33121 tagatgaagagcaggaggatg 33141 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33087 tagatgaagagcaggaggatg 33107 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33053 tagatgaagagcaggaggatg 33073 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 33019 tagatgaagagcaggaggatg 33039 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32985 tagatgaagagcaggaggatg 33005 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32951 tagatgaagagcaggaggatg 32971 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32917 tagatgaagagcaggaggatg 32937 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32883 tagatgaagagcaggaggatg 32903 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32849 tagatgaagagcaggaggatg 32869 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32815 tagatgaagagcaggaggatg 32835 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32781 tagatgaagagcaggaggatg 32801 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32747 tagatgaagagcaggaggatg 32767 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32713 tagatgaagagcaggaggatg 32733 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32679 tagatgaagagcaggaggatg 32699 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32645 tagatgaagagcaggaggatg 32665 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32611 tagatgaagagcaggaggatg 32631 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32577 tagatgaagagcaggaggatg 32597 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32543 tagatgaagagcaggaggatg 32563 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32059 tagatgaagagcaggaggatg 32079 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 32025 tagatgaagagcaggaggatg 32045 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31991 tagatgaagagcaggaggatg 32011 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31957 tagatgaagagcaggaggatg 31977 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31923 tagatgaagagcaggaggatg 31943 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31889 tagatgaagagcaggaggatg 31909 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31855 tagatgaagagcaggaggatg 31875 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31821 tagatgaagagcaggaggatg 31841 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31753 tagatgaagagcaggaggatg 31773 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31719 tagatgaagagcaggaggatg 31739 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31685 tagatgaagagcaggaggatg 31705 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31651 tagatgaagagcaggaggatg 31671 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31617 tagatgaagagcaggaggatg 31637 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31583 tagatgaagagcaggaggatg 31603 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31549 tagatgaagagcaggaggatg 31569 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31515 tagatgaagagcaggaggatg 31535 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31481 tagatgaagagcaggaggatg 31501 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31447 tagatgaagagcaggaggatg 31467 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31413 tagatgaagagcaggaggatg 31433 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31379 tagatgaagagcaggaggatg 31399 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31345 tagatgaagagcaggaggatg 31365 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31311 tagatgaagagcaggaggatg 31331 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31277 tagatgaagagcaggaggatg 31297 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31243 tagatgaagagcaggaggatg 31263 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31209 tagatgaagagcaggaggatg 31229 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31175 tagatgaagagcaggaggatg 31195 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31141 tagatgaagagcaggaggatg 31161 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31107 tagatgaagagcaggaggatg 31127 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 31073 tagatgaagagcaggaggatg 31093 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 30589 tagatgaagagcaggaggatg 30609 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 30557 tagatgaagagcaggaggatg 30577 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 30523 tagatgaagagcaggaggatg 30543 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 30489 tagatgaagagcaggaggatg 30509 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaagagcaggaggatg 345 ||||||||||||||||||||| Sbjct: 30455 tagatgaagagcaggaggatg 30475
>ref|XM_477694.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttttattgatgttatgtacgcaca 123 |||||||||||| |||||||||||| Sbjct: 1064 tttttattgatggtatgtacgcaca 1040
>gb|AC157554.7| Mus musculus chromosome 15, clone RP24-324P21, complete sequence Length = 217353 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gatgaagagcaggaggatgcc 347 ||||||||||||||||||||| Sbjct: 203991 gatgaagagcaggaggatgcc 204011
>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence Length = 193320 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 gaagagcaggaggatgccgatggtg 354 ||||||||||||||||| ||||||| Sbjct: 50432 gaagagcaggaggatgcggatggtg 50408
>ref|NG_004771.2| Mus musculus prolactin pseudogene (RP23-135A24.2-001) on chromosome 13 Length = 7870 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 624 tataaaggagaagagcagagaaggc 648 |||||||||||| |||||||||||| Sbjct: 2151 tataaaggagaaaagcagagaaggc 2175
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 gggcgaccgccgtcaggagga 523 ||||||||||||||||||||| Sbjct: 920705 gggcgaccgccgtcaggagga 920685
>emb|AL732408.4| Mouse DNA sequence from clone RP23-135A24 on chromosome 13 Contains a prolactin (Prl) pseudogene and the 3' end of the Plfr gene for proliferin related protein, complete sequence Length = 29333 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 624 tataaaggagaagagcagagaaggc 648 |||||||||||| |||||||||||| Sbjct: 7988 tataaaggagaaaagcagagaaggc 7964
>emb|CR607186.1| full-length cDNA clone CS0DJ014YA23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 995 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gccttgatgtgctcgtggagc 423 ||||||||||||||||||||| Sbjct: 324 gccttgatgtgctcgtggagc 304
>dbj|AK158603.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230025B05 product:brain expressed myelocytomatosis oncogene, full insert sequence Length = 842 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 834 agacgtttttattgatgttat 814
>dbj|AK013780.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900074D10 product:brain expressed myelocytomatosis oncogene, full insert sequence Length = 1060 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 830 agacgtttttattgatgttat 810
>dbj|AK013473.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900002K07 product:B-MYC TRANSFORMING PROTEIN (FRAGMENT) homolog [Rattus norvegicus], full insert sequence Length = 889 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 834 agacgtttttattgatgttat 814
>dbj|AK012810.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810025H07 product:B-MYC TRANSFORMING PROTEIN (FRAGMENT) homolog [Rattus norvegicus], full insert sequence Length = 834 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 826 agacgtttttattgatgttat 806
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 acatgcatgagaagaacttgc 52 ||||||||||||||||||||| Sbjct: 5586502 acatgcatgagaagaacttgc 5586522
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttttattgatgttatgtacgcaca 123 |||||||||||| |||||||||||| Sbjct: 13313900 tttttattgatggtatgtacgcaca 13313876
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone BACR03B07, complete sequence Length = 170089 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 330 gaagagcaggaggatgccgatggtg 354 ||||||||||||||||| ||||||| Sbjct: 157578 gaagagcaggaggatgcggatggtg 157602
>gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, complete sequence Length = 153792 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ccttctggaaggcctccttgaggcctcct 399 ||||| ||||||||||||||| ||||||| Sbjct: 45724 ccttcaggaaggcctccttgatgcctcct 45696
>ref|NM_023326.2| Mus musculus brain expressed myelocytomatosis oncogene (Bmyc), mRNA Length = 861 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 784 agacgtttttattgatgttat 764
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gccttctggaaggcctccttg 390 ||||||||||||||||||||| Sbjct: 4033176 gccttctggaaggcctccttg 4033156
>gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167113 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 622 cttataaaggagaagagcagagaaggcat 650 |||| |||||| ||||||||||||||||| Sbjct: 121707 cttagaaaggaaaagagcagagaaggcat 121735
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_B01 Length = 105736 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttttattgatgttatgtacgcaca 123 |||||||||||| |||||||||||| Sbjct: 28338 tttttattgatggtatgtacgcaca 28314
>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0025D09 Length = 142593 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttttattgatgttatgtacgcaca 123 |||||||||||| |||||||||||| Sbjct: 101763 tttttattgatggtatgtacgcaca 101739
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 acatgcatgagaagaacttgc 52 ||||||||||||||||||||| Sbjct: 11633 acatgcatgagaagaacttgc 11613
>gb|BC061001.1| Mus musculus brain expressed myelocytomatosis oncogene, mRNA (cDNA clone MGC:74100 IMAGE:6595436), complete cds Length = 967 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 883 agacgtttttattgatgttat 863
>emb|BX649340.3| Mouse DNA sequence from clone RP23-225D24 on chromosome 2, complete sequence Length = 99083 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 5243 agacgtttttattgatgttat 5223
>dbj|AK105945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C04, full insert sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttttattgatgttatgtacgcaca 123 |||||||||||| |||||||||||| Sbjct: 1064 tttttattgatggtatgtacgcaca 1040
>gb|AC005710.2|AC005710 Drosophila melanogaster, chromosome 2R, region 60E1-60E2, P1 clone DS04938, complete sequence Length = 57955 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 gaagagcaggaggatgccgatggtg 354 ||||||||||||||||| ||||||| Sbjct: 34733 gaagagcaggaggatgcggatggtg 34709
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 330 gaagagcaggaggatgccgatggtg 354 ||||||||||||||||| ||||||| Sbjct: 119731 gaagagcaggaggatgcggatggtg 119755
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 acatgcatgagaagaacttgc 52 ||||||||||||||||||||| Sbjct: 5586491 acatgcatgagaagaacttgc 5586511
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 acatgcatgagaagaacttgc 52 ||||||||||||||||||||| Sbjct: 139307 acatgcatgagaagaacttgc 139327
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 acatgcatgagaagaacttgc 52 ||||||||||||||||||||| Sbjct: 66383 acatgcatgagaagaacttgc 66363
>gb|BC060207.1| Mus musculus cDNA clone IMAGE:6824373, containing frame-shift errors Length = 861 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 784 agacgtttttattgatgttat 764
>gb|BC056436.1| Mus musculus cDNA clone IMAGE:6824373, containing frame-shift errors Length = 861 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 784 agacgtttttattgatgttat 764
>emb|Z38066.1|MMCMYCX2 M.musculus DNA for c-myc, exon 2 Length = 873 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agacgtttttattgatgttat 114 ||||||||||||||||||||| Sbjct: 855 agacgtttttattgatgttat 835
>emb|AL671866.8| Mouse DNA sequence from clone RP23-59L24 on chromosome 4, complete sequence Length = 230447 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 627 aaaggagaagagcagagaagg 647 ||||||||||||||||||||| Sbjct: 24981 aaaggagaagagcagagaagg 25001
>ref|NM_004341.3| Homo sapiens carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (CAD), mRNA Length = 7108 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggccttctggaaggcctcct 388 |||||||||||||||||||| Sbjct: 2499 ggccttctggaaggcctcct 2480
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 acggcgacgccgatgatgag 467 |||||||||||||||||||| Sbjct: 94108 acggcgacgccgatgatgag 94089
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 aaaggagaagagcagagaag 646 |||||||||||||||||||| Sbjct: 52699 aaaggagaagagcagagaag 52680
>ref|XM_525720.1| PREDICTED: Pan troglodytes LOC470338 (LOC470338), mRNA Length = 6741 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggccttctggaaggcctcct 388 |||||||||||||||||||| Sbjct: 2370 ggccttctggaaggcctcct 2351
>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence Length = 80662 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tctggaaggcctccttgagg 393 |||||||||||||||||||| Sbjct: 42349 tctggaaggcctccttgagg 42330
>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence Length = 177843 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 acgtttttattgatgttatg 115 |||||||||||||||||||| Sbjct: 49005 acgtttttattgatgttatg 49024
>gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, complete sequence Length = 140039 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 aaaggagaagagcagagaag 646 |||||||||||||||||||| Sbjct: 116596 aaaggagaagagcagagaag 116577
>ref|XM_322125.1| Neurospora crassa OR74A hypothetical protein (NCU00040.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tgatgtgctcgtggagcagg 426 |||||||||||||||||||| Sbjct: 109 tgatgtgctcgtggagcagg 90
>ref|XM_951058.1| Neurospora crassa OR74A hypothetical protein (NCU00040.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tgatgtgctcgtggagcagg 426 |||||||||||||||||||| Sbjct: 109 tgatgtgctcgtggagcagg 90
>gb|AC122006.3| Mus musculus BAC clone RP24-344B12 from chromosome 16, complete sequence Length = 156395 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 ggagaagagcagagaaggca 649 |||||||||||||||||||| Sbjct: 81925 ggagaagagcagagaaggca 81906
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence Length = 186155 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 635 agagcagagaaggcatggtg 654 |||||||||||||||||||| Sbjct: 80421 agagcagagaaggcatggtg 80402
>gb|BC101998.1| Homo sapiens cDNA clone IMAGE:40023295 Length = 1031 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 467 agatgaagagcaggaggatg 486
>emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chromosome 12, complete sequence Length = 219782 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gtggcaccaaatggaaacat 165 |||||||||||||||||||| Sbjct: 72664 gtggcaccaaatggaaacat 72645
>gb|BC007652.1| Homo sapiens cDNA clone IMAGE:3609599 Length = 1192 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 453 agatgaagagcaggaggatg 472
>emb|AL591849.7| Human DNA sequence from clone RP11-321G1 on chromosome Xq22.3-24 Contains the 3' end of a novel gene, gene LOC92129 and the 5' end of the CLUDN2 gene for claudin 2, complete sequence Length = 54578 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 30154 agatgaagagcaggaggatg 30135
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 acggcgacgccgatgatgag 467 |||||||||||||||||||| Sbjct: 23575 acggcgacgccgatgatgag 23594
>emb|AL121830.25|HSJ718D20 Human DNA sequence from clone RP4-718D20 on chromosome 20 Contains part of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 87394 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gggtagatgaagagcaggaggatg 345 |||||||||||||| ||||||||| Sbjct: 47166 gggtagatgaagaggaggaggatg 47143
>gb|AC130892.6| Homo sapiens X BAC RP13-1002M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 32001 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gaggatcagagagccaggca 538 |||||||||||||||||||| Sbjct: 11760 gaggatcagagagccaggca 11741
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence Length = 196383 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 635 agagcagagaaggcatggtg 654 |||||||||||||||||||| Sbjct: 157474 agagcagagaaggcatggtg 157455
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aaggaaacaaattaagcagt 147 |||||||||||||||||||| Sbjct: 42766 aaggaaacaaattaagcagt 42785
>gb|BC065510.1| Homo sapiens carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, mRNA (cDNA clone MGC:74758 IMAGE:5551082), complete cds Length = 7151 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggccttctggaaggcctcct 388 |||||||||||||||||||| Sbjct: 2499 ggccttctggaaggcctcct 2480
>emb|AJ719628.1| Gallus gallus mRNA for hypothetical protein, clone 4l8 Length = 3775 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atgaagagcaggaggatgcc 347 |||||||||||||||||||| Sbjct: 2926 atgaagagcaggaggatgcc 2945
>ref|NM_001006224.1| Gallus gallus tripartite motif-containing 37 (TRIM37), mRNA Length = 3775 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atgaagagcaggaggatgcc 347 |||||||||||||||||||| Sbjct: 2926 atgaagagcaggaggatgcc 2945
>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167398 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 aacaaattaagcagtggcaccaaa 156 ||||||| |||||||||||||||| Sbjct: 152946 aacaaatcaagcagtggcaccaaa 152923
>gb|AC104460.2| Homo sapiens chromosome 1 clone RP11-438O11, complete sequence Length = 162514 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tccattggccttctggaagg 382 |||||||||||||||||||| Sbjct: 94786 tccattggccttctggaagg 94805
>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds Length = 171266 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 aacaaattaagcagtggcaccaaa 156 ||||||| |||||||||||||||| Sbjct: 156819 aacaaatcaagcagtggcaccaaa 156796
>ref|XM_936957.1| PREDICTED: Homo sapiens hypothetical protein BC007652, transcript variant 3 (LOC92129), mRNA Length = 1174 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 461 agatgaagagcaggaggatg 480
>ref|XM_943090.1| PREDICTED: Homo sapiens hypothetical protein BC007652, transcript variant 4 (LOC92129), mRNA Length = 1030 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 324 agatgaagagcaggaggatg 343
>ref|XM_372239.4| PREDICTED: Homo sapiens hypothetical protein BC007652, transcript variant 1 (LOC92129), mRNA Length = 1174 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 461 agatgaagagcaggaggatg 480
>ref|XM_932453.1| PREDICTED: Homo sapiens hypothetical protein BC007652, transcript variant 2 (LOC92129), mRNA Length = 1030 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agatgaagagcaggaggatg 345 |||||||||||||||||||| Sbjct: 324 agatgaagagcaggaggatg 343
>gb|AC097634.2| Homo sapiens chromosome 3 clone RP11-154H23, complete sequence Length = 193553 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 aaaggagaagagcagagaag 646 |||||||||||||||||||| Sbjct: 184032 aaaggagaagagcagagaag 184013
>gb|AC008969.6| Homo sapiens chromosome 19 clone CTD-2368P22, complete sequence Length = 98561 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 aggatcagagagccaggcag 539 |||||||||||||||||||| Sbjct: 31030 aggatcagagagccaggcag 31049
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gccggcagctcatcacttcaatcc 74 ||||||||||||||||| |||||| Sbjct: 2063145 gccggcagctcatcactacaatcc 2063122
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence Length = 220437 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 635 agagcagagaaggcatggtg 654 |||||||||||||||||||| Sbjct: 38937 agagcagagaaggcatggtg 38956
>gb|AC163035.2| Mus musculus BAC clone RP23-301L2 from chromosome 6, complete sequence Length = 196798 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 631 gagaagagcagagaaggcatggtg 654 |||||||| ||||||||||||||| Sbjct: 32668 gagaagagaagagaaggcatggtg 32691
>gb|AC010326.7| Homo sapiens chromosome 19 clone CTD-2583A14, complete sequence Length = 133852 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 aggatcagagagccaggcag 539 |||||||||||||||||||| Sbjct: 127758 aggatcagagagccaggcag 127777
>gb|AC128966.4| Rattus norvegicus BAC CH230-194D11 (Children's Hospital Oakland Research Institute) complete sequence Length = 214096 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 acagatcaaggaaacaaattaagcagtg 148 |||||||| ||||||||||||| ||||| Sbjct: 49661 acagatcatggaaacaaattaaacagtg 49688
>gb|AF184243.1|AF184243 Homo sapiens augmenter of liver regeneration gene, promoter region and partial cds Length = 2990 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tctggaaggcctccttgagg 393 |||||||||||||||||||| Sbjct: 1778 tctggaaggcctccttgagg 1759
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aaggaaacaaattaagcagt 147 |||||||||||||||||||| Sbjct: 23325269 aaggaaacaaattaagcagt 23325288
>gb|AC013413.6| Homo sapiens BAC clone RP11-538J11 from 2, complete sequence Length = 118847 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggccttctggaaggcctcct 388 |||||||||||||||||||| Sbjct: 14510 ggccttctggaaggcctcct 14491
>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence Length = 201971 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ccttgatgtgctcgtggagc 423 |||||||||||||||||||| Sbjct: 156836 ccttgatgtgctcgtggagc 156855
>gb|AY212269.1| Homo sapiens hepatic stimulator substance gene, 5' flanking region and 5' UTR Length = 4948 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tctggaaggcctccttgagg 393 |||||||||||||||||||| Sbjct: 3690 tctggaaggcctccttgagg 3671
>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence Length = 167400 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 agcagagaaggcatggtgaa 656 |||||||||||||||||||| Sbjct: 60943 agcagagaaggcatggtgaa 60962
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gagcaggaggatgccgatgg 352 |||||||||||||||||||| Sbjct: 649678 gagcaggaggatgccgatgg 649697
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gagcaggaggatgccgatgg 352 |||||||||||||||||||| Sbjct: 311856 gagcaggaggatgccgatgg 311875
>emb|CT027664.2| Medicago truncatula chromosome 5 clone mth2-160e5, COMPLETE SEQUENCE Length = 146823 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atgcatgagaagaacttgcc 53 |||||||||||||||||||| Sbjct: 65788 atgcatgagaagaacttgcc 65769
>gb|AC147235.3| Mus musculus BAC clone RP23-353B7 from 6, complete sequence Length = 193668 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 631 gagaagagcagagaaggcatggtg 654 |||||||| ||||||||||||||| Sbjct: 60087 gagaagagaagagaaggcatggtg 60064
>gb|AC068908.21| Mus musculus BAC Clone 389o18 RPCI-23, complete sequence Length = 198576 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 635 agagcagagaaggcatggtg 654 |||||||||||||||||||| Sbjct: 90100 agagcagagaaggcatggtg 90081
>gb|AC172106.1| Mus musculus BAC clone RP23-395K8 from chromosome 16, complete sequence Length = 191119 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 ggagaagagcagagaaggca 649 |||||||||||||||||||| Sbjct: 4249 ggagaagagcagagaaggca 4268
>dbj|D78586.1|HUMMUPCAD Human CAD mRNA for multifunctional protein CAD, complete cds Length = 6972 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggccttctggaaggcctcct 388 |||||||||||||||||||| Sbjct: 2363 ggccttctggaaggcctcct 2344 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,477,928 Number of Sequences: 3902068 Number of extensions: 5477928 Number of successful extensions: 110645 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109936 Number of HSP's gapped (non-prelim): 696 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
