>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                            
Query: 268      tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 327
                |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 20852658 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 20852717

                                
Query: 328      gttgtcctctttcttc 343
                ||||  ||||||||||
Sbjct: 20852718 gttggtctctttcttc 20852733

>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                         
Query: 268   tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 327
             |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 54388 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 54447

                             
Query: 328   gttgtcctctttcttc 343
             ||||  ||||||||||
Sbjct: 54448 gttggtctctttcttc 54463

>dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O07, full
            insert sequence
          Length = 2150

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                        
Query: 268  tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 327
            |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 1807 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 1748

                            
Query: 328  gttgtcctctttcttc 343
            ||||  ||||||||||
Sbjct: 1747 gttggtctctttcttc 1732

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                            
Query: 268      tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 327
                |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 20778872 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 20778931

                                
Query: 328      gttgtcctctttcttc 343
                ||||  ||||||||||
Sbjct: 20778932 gttggtctctttcttc 20778947

>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                          
Query: 268    tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 327
              |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 106337 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 106278

                              
Query: 328    gttgtcctctttcttc 343
              ||||  ||||||||||
Sbjct: 106277 gttggtctctttcttc 106262

>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence
          Length = 205684

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     tgtcaacttgacacagcagag 64
              |||||||||||||||||||||
Sbjct: 153870 tgtcaacttgacacagcagag 153850

>gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosome 12, complete sequence
          Length = 168486

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     tgtcaacttgacacagcagag 64
              |||||||||||||||||||||
Sbjct: 126834 tgtcaacttgacacagcagag 126854

>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete
              sequence
          Length = 190466

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    aggcaggaagacatcccatgc 227
              |||||||||||||||||||||
Sbjct: 137993 aggcaggaagacatcccatgc 138013

>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence
          Length = 216271

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 72386 gtgtcaacttgacacagcag 72405

>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence
          Length = 131587

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 61024 gtgtcaacttgacacagcag 61005

>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region:
             complement C4 (C4) and cytochrome P450 hydroxylase A
             (CYP21OH-A) genes, complete cds; slp pseudogene, complete
             sequence; NG6, SKI, and complement factor B (Bf) genes,
             complete cds; and complement factor C2 (C2) gene, partial
             cds
          Length = 149886

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 11601 gtgtcaacttgacacagcag 11620

>gb|AC122302.4| Mus musculus BAC clone RP23-276E10 from chromosome 12, complete sequence
          Length = 172985

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 162397 gtgtcaacttgacacagcag 162416

>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence
          Length = 216751

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 122695 gtgtcaacttgacacagcag 122676

>emb|CT025689.6| Mouse DNA sequence from clone RP24-236L7 on chromosome 14, complete
             sequence
          Length = 177482

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 95338 gtgtcaacttgacacagcag 95357

>gb|AC127231.4| Mus musculus BAC clone RP24-554M18 from chromosome 18, complete
             sequence
          Length = 140817

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 90872 gtgtcaacttgacacagcag 90853

>gb|AC121804.3| Mus musculus BAC clone RP23-442I5 from chromosome 12, complete sequence
          Length = 199938

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    agtgtcaacttgacacagca 61
             ||||||||||||||||||||
Sbjct: 83176 agtgtcaacttgacacagca 83157

>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 236028 gtgtcaacttgacacagcag 236047

>gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 71492 gtgtcaacttgacacagcag 71473

>gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, complete sequence
          Length = 201487

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 177511 gtgtcaacttgacacagcag 177492

>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    ataaactaaaccaagcataa 121
              ||||||||||||||||||||
Sbjct: 286089 ataaactaaaccaagcataa 286070

>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      cttacaaaatgagaaattcc 22
              ||||||||||||||||||||
Sbjct: 143280 cttacaaaatgagaaattcc 143299

>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 179613

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     cttacaaaatgagaaattcc 22
             ||||||||||||||||||||
Sbjct: 96810 cttacaaaatgagaaattcc 96829

>gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, complete sequence
          Length = 203171

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    atagaaacaacaaatgccct 309
              ||||||||||||||||||||
Sbjct: 151666 atagaaacaacaaatgccct 151647

>gb|AC159885.2| Mus musculus BAC clone RP24-432B19 from chromosome 12, complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 159396 gtgtcaacttgacacagcag 159415

>gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome 6, complete sequence
          Length = 192598

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 85639 gtgtcaacttgacacagcag 85620

>gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2, complete sequence
          Length = 206589

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   atagaaacaacaaatgccct 309
             ||||||||||||||||||||
Sbjct: 84409 atagaaacaacaaatgccct 84390

>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds
          Length = 17522

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   gtgtcaacttgacacagcag 62
            ||||||||||||||||||||
Sbjct: 8249 gtgtcaacttgacacagcag 8230

>emb|AL929373.15| Mouse DNA sequence from clone RP23-31K16 on chromosome 4, complete
             sequence
          Length = 169690

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 89630 gtgtcaacttgacacagcag 89649

>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete
              sequence
          Length = 365612

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      cttacaaaatgagaaattcc 22
              ||||||||||||||||||||
Sbjct: 276172 cttacaaaatgagaaattcc 276191

>gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone rp23-430i3, complete
              sequence
          Length = 183540

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 145151 gtgtcaacttgacacagcag 145132

>gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, complete sequence
          Length = 232792

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 231809 gtgtcaacttgacacagcag 231828

>emb|BX005053.5| Mouse DNA sequence from clone RP23-35D18 on chromosome 4, complete
              sequence
          Length = 186734

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 177016 gtgtcaacttgacacagcag 176997

>gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, complete sequence
          Length = 176663

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 150579 gtgtcaacttgacacagcag 150560

>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete
             sequence
          Length = 111957

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gtgtcaacttgacacagcag 62
             ||||||||||||||||||||
Sbjct: 75080 gtgtcaacttgacacagcag 75099

>gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, complete sequence
          Length = 206973

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 135006 gtgtcaacttgacacagcag 134987

>gb|AC149220.3| Mus musculus BAC clone RP23-412J12 from 7, complete sequence
          Length = 172077

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtgtcaacttgacacagcag 62
              ||||||||||||||||||||
Sbjct: 106018 gtgtcaacttgacacagcag 105999


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,424,893
Number of Sequences: 3902068
Number of extensions: 3424893
Number of successful extensions: 96551
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96398
Number of HSP's gapped (non-prelim): 153
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)