ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15g20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_482151.1| Oryza sativa (japonica cultivar-group), mRNA 149 2e-32
2ref|XM_507217.1| PREDICTED Oryza sativa (japonica cultivar-group... 149 2e-32
3dbj|AK070379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 2e-32
4dbj|AK059323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 4e-30
5gb|AY110378.1| Zea mays CL14316_2 mRNA sequence 125 2e-25
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
10dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
11gb|AY110094.1| Zea mays CL14316_-3 mRNA sequence 62 3e-06
12gb|AY267693.1| Bigelowiella natans nitrate reductase mRNA, compl... 60 1e-05
13ref|NM_104749.2| Arabidopsis thaliana B5 #5 AT1G60660 (B5 #5) mR... 56 2e-04
14gb|AY133575.1| Arabidopsis thaliana At1g60660/F8A5_18 mRNA, comp... 56 2e-04
15gb|AY049297.1| Arabidopsis thaliana At1g60660/F8A5_18 mRNA, comp... 56 2e-04
16gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete s... 56 2e-04
17ref|NM_124258.2| Arabidopsis thaliana ATB5-B AT5G48810 (ATB5-B) ... 42 2.5
18gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, c... 42 2.5
19emb|AL391988.14| Human DNA sequence from clone RP11-129M16 on ch... 42 2.5
20gb|AY063073.1| Arabidopsis thaliana putative cytochrome b5 prote... 42 2.5
21gb|AF370256.1| Arabidopsis thaliana putative cytochrome b5 prote... 42 2.5
22emb|AJ001370.1|OEJ001370 Olea europaea cytochrome b5 gene-2 42 2.5
23emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chr... 42 2.5
24emb|BX829982.1|CNS0A1B1 Arabidopsis thaliana Full-length cDNA Co... 42 2.5
25emb|BX841663.1|CNS09YKX Arabidopsis thaliana Full-length cDNA Co... 42 2.5
26gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromos... 42 2.5
27gb|AY086738.1| Arabidopsis thaliana clone 27167 mRNA, complete s... 42 2.5
28dbj|AB007802.1| Arabidopsis thaliana mRNA for cytochrome b5, com... 42 2.5
29gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 42 2.5
30gb|AC005880.3|AC005880 citb_43_a_11, complete sequence 42 2.5
31gb|BC058676.1| Mus musculus cache domain containing 1, mRNA (cDN... 40 10.0
32gb|BC080313.1| Mus musculus cache domain containing 1, mRNA (cDN... 40 10.0
33gb|BC057356.1| Mus musculus cache domain containing 1, mRNA (cDN... 40 10.0
34gb|AC155304.4| Mus musculus BAC clone RP24-212I6 from chromosome... 40 10.0
35ref|NM_198037.1| Mus musculus cache domain containing 1 (Cachd1)... 40 10.0
36gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 10.0
37ref|XM_596512.2| PREDICTED: Bos taurus similar to Doublecortin d... 40 10.0
38gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosom... 40 10.0
39ref|XM_455476.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08723g ... 40 10.0
40ref|XR_003347.1| PREDICTED: Mus musculus similar to pescadillo h... 40 10.0
41ref|XM_991872.1| PREDICTED: Mus musculus cache domain containing... 40 10.0
42ref|XM_991843.1| PREDICTED: Mus musculus cache domain containing... 40 10.0
43ref|XM_991907.1| PREDICTED: Mus musculus cache domain containing... 40 10.0
44gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC... 40 10.0
45emb|CR728646.2|CNS0GP64 Tetraodon nigroviridis full-length cDNA 40 10.0
46emb|AL359755.9| Human DNA sequence from clone RP13-104H2 on chro... 40 10.0
47gb|AY300015.1| Brassica juncea cytoplasmic male sterility-associ... 40 10.0
48emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 10.0
49emb|BX927153.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 10.0
50emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, stra... 40 10.0
51gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosom... 40 10.0
52emb|BX957290.7| Zebrafish DNA sequence from clone CH211-134G9 in... 40 10.0
53gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, com... 40 10.0
54dbj|AB234906.1| Verbena x hybrida mRNA for anthocyanidin synthas... 40 10.0
55gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, compl... 40 10.0
56gb|AC022139.5| Homo sapiens chromosome 5 clone CTD-2255L15, comp... 40 10.0
57gb|AC159911.7| Mus musculus 10 BAC RP23-465M5 (Roswell Park Canc... 40 10.0
58dbj|AK004514.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 10.0
59gb|DQ019482.1| Lilium longiflorum clone LP26 cytochome b5-like m... 40 10.0
60dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 10.0
61gb|AC008278.3|AC008278 Homo sapiens BAC clone RP11-422A6 from 2,... 40 10.0
62emb|BX248502.17| Zebrafish DNA sequence from clone DKEY-284M10 i... 40 10.0
63emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome 40 10.0
64emb|AL592225.17| Mouse DNA sequence from clone RP23-278M14 on ch... 40 10.0
65emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chro... 40 10.0
66gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 10.0
67gb|J05042.1|RABCOLVIII Rabbit type VIII collagen alpha-1 chain m... 40 10.0

>ref|XM_482151.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 843

 Score =  149 bits (75), Expect = 2e-32
 Identities = 186/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 gccgatgcagaaatcctcgatgatgtcgaagactcgtgtgccatgctgcgggccgaaaaa 348
           ||||||||||||||| || ||||| || |||||||    |||||| || ||||| |||||
Sbjct: 568 gccgatgcagaaatcttcaatgatctcaaagactctgaagccatgttgagggccaaaaaa 509

                                                                       
Query: 349 tccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgttcctc 408
           ||| ||||||||||| |  |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 508 tccttctgtcgaatcaccaccagcattgtttaggatggcatctccccctggatgttcctc 449

                                                                       
Query: 409 cacgtatggagttacatcataaaccttgtccttgattatgatccaacaatccttccttgt 468
           ||| || |  || ||||| |||||||| |||||||| |||| ||| |||||| |||||||
Sbjct: 448 cacataagaggtgacatcgtaaaccttatccttgatgatgacccagcaatccgtccttgt 389

                                                      
Query: 469 gttgtgagttgacacctctttctttgtatagctcgtagatgtc 511
           |||||| | ||| | |||||  |||||||||||| || |||||
Sbjct: 388 gttgtgtgctgagatctcttcttttgtatagctcctaaatgtc 346



to top

>ref|XM_507217.1| PREDICTED Oryza sativa (japonica cultivar-group), P0434E03.7 mRNA
          Length = 870

 Score =  149 bits (75), Expect = 2e-32
 Identities = 186/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 gccgatgcagaaatcctcgatgatgtcgaagactcgtgtgccatgctgcgggccgaaaaa 348
           ||||||||||||||| || ||||| || |||||||    |||||| || ||||| |||||
Sbjct: 509 gccgatgcagaaatcttcaatgatctcaaagactctgaagccatgttgagggccaaaaaa 450

                                                                       
Query: 349 tccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgttcctc 408
           ||| ||||||||||| |  |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 449 tccttctgtcgaatcaccaccagcattgtttaggatggcatctccccctggatgttcctc 390

                                                                       
Query: 409 cacgtatggagttacatcataaaccttgtccttgattatgatccaacaatccttccttgt 468
           ||| || |  || ||||| |||||||| |||||||| |||| ||| |||||| |||||||
Sbjct: 389 cacataagaggtgacatcgtaaaccttatccttgatgatgacccagcaatccgtccttgt 330

                                                      
Query: 469 gttgtgagttgacacctctttctttgtatagctcgtagatgtc 511
           |||||| | ||| | |||||  |||||||||||| || |||||
Sbjct: 329 gttgtgtgctgagatctcttcttttgtatagctcctaaatgtc 287



to top

>dbj|AK070379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054P20, full
           insert sequence
          Length = 870

 Score =  149 bits (75), Expect = 2e-32
 Identities = 186/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 gccgatgcagaaatcctcgatgatgtcgaagactcgtgtgccatgctgcgggccgaaaaa 348
           ||||||||||||||| || ||||| || |||||||    |||||| || ||||| |||||
Sbjct: 509 gccgatgcagaaatcttcaatgatctcaaagactctgaagccatgttgagggccaaaaaa 450

                                                                       
Query: 349 tccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgttcctc 408
           ||| ||||||||||| |  |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 449 tccttctgtcgaatcaccaccagcattgtttaggatggcatctccccctggatgttcctc 390

                                                                       
Query: 409 cacgtatggagttacatcataaaccttgtccttgattatgatccaacaatccttccttgt 468
           ||| || |  || ||||| |||||||| |||||||| |||| ||| |||||| |||||||
Sbjct: 389 cacataagaggtgacatcgtaaaccttatccttgatgatgacccagcaatccgtccttgt 330

                                                      
Query: 469 gttgtgagttgacacctctttctttgtatagctcgtagatgtc 511
           |||||| | ||| | |||||  |||||||||||| || |||||
Sbjct: 329 gttgtgtgctgagatctcttcttttgtatagctcctaaatgtc 287



to top

>dbj|AK059323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H10, full
           insert sequence
          Length = 842

 Score =  141 bits (71), Expect = 4e-30
 Identities = 185/223 (82%)
 Strand = Plus / Minus

                                                                       
Query: 289 gccgatgcagaaatcctcgatgatgtcgaagactcgtgtgccatgctgcgggccgaaaaa 348
           ||||||||||||||| || ||||| || |||||||    |||||| || ||||| |||||
Sbjct: 568 gccgatgcagaaatcttcaatgatctcaaagactctgaagccatgttgagggccaaaaaa 509

                                                                       
Query: 349 tccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgttcctc 408
           ||| ||||||||||| |  |||||||||||||| |||||||| || ||||||| ||||||
Sbjct: 508 tccttctgtcgaatcaccaccagcattgtttaggatggcatctccccctggatattcctc 449

                                                                       
Query: 409 cacgtatggagttacatcataaaccttgtccttgattatgatccaacaatccttccttgt 468
           ||| || |  || ||||| |||||||| |||||||| |||| ||| |||||| |||||||
Sbjct: 448 cacataagaggtgacatcgtaaaccttatccttgatgatgacccagcaatccgtccttgt 389

                                                      
Query: 469 gttgtgagttgacacctctttctttgtatagctcgtagatgtc 511
           |||||| | ||| | |||||  |||||||||||| || |||||
Sbjct: 388 gttgtgtgctgagatctcttcttttgtatagctcctaaatgtc 346



to top

>gb|AY110378.1| Zea mays CL14316_2 mRNA sequence
          Length = 844

 Score =  125 bits (63), Expect = 2e-25
 Identities = 148/180 (82%)
 Strand = Plus / Plus

                                                                       
Query: 290 ccgatgcagaaatcctcgatgatgtcgaagactcgtgtgccatgctgcgggccgaaaaat 349
           ||||||||||||||||||||||| |||||||| |  ||||||||||| || ||       
Sbjct: 403 ccgatgcagaaatcctcgatgatatcgaagaccctagtgccatgctgtggcccnnnnnng 462

                                                                       
Query: 350 ccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgttcctcc 409
           ||||| || |||||      |||||| |||||||||||||| || |||||||||||||| 
Sbjct: 463 ccctccgtggaatcannnnnagcattatttagaatggcatctccgcctggatgttcctct 522

                                                                       
Query: 410 acgtatggagttacatcataaaccttgtccttgattatgatccaacaatccttccttgtg 469
           || || ||||| |||||||| |||||||||||||| ||||||||||| |||| |||||||
Sbjct: 523 acataaggagtgacatcatagaccttgtccttgataatgatccaacagtcctcccttgtg 582



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                            
Query: 430      aaccttgtccttgattatgatccaacaatccttccttgtgttgtgagttgacacctcttt 489
                |||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 10079839 aaccttgtccttgactatgatccaacaatccttccttgtgttgtgagtcgatacctcttt 10079898

                             
Query: 490      ctttgtatagctc 502
                |||||||||||||
Sbjct: 10079899 ctttgtatagctc 10079911



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                            
Query: 344      aaaaatccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgt 403
                |||||||||||||| ||||| |  || ||||||||||||||  |||||||||||||||||
Sbjct: 10079634 aaaaatccctctgttgaatcaccaccggcattgtttagaatttcatcaccacctggatgt 10079693

                        
Query: 404      tcctccac 411
                ||||||||
Sbjct: 10079694 tcctccac 10079701



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 268      tcatcatcagtcttccaatttgccgatgcagaaatcctcgatgatgtcgaagactc 323
                |||||||||||| | || |||||||||||||||||| |||||||| ||||||||||
Sbjct: 10078838 tcatcatcagtccttcagtttgccgatgcagaaatcttcgatgatctcgaagactc 10078893



to top

>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0466E03
          Length = 138343

 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                          
Query: 430    aaccttgtccttgattatgatccaacaatccttccttgtgttgtgagttgacacctcttt 489
              |||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 109143 aaccttgtccttgactatgatccaacaatccttccttgtgttgtgagtcgatacctcttt 109202

                           
Query: 490    ctttgtatagctc 502
              |||||||||||||
Sbjct: 109203 ctttgtatagctc 109215



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                          
Query: 344    aaaaatccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgt 403
              |||||||||||||| ||||| |  || ||||||||||||||  |||||||||||||||||
Sbjct: 108938 aaaaatccctctgttgaatcaccaccggcattgtttagaatttcatcaccacctggatgt 108997

                      
Query: 404    tcctccac 411
              ||||||||
Sbjct: 108998 tcctccac 109005



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                      
Query: 268    tcatcatcagtcttccaatttgccgatgcagaaatcctcgatgatgtcgaagactc 323
              |||||||||||| | || |||||||||||||||||| |||||||| ||||||||||
Sbjct: 108142 tcatcatcagtccttcagtttgccgatgcagaaatcttcgatgatctcgaagactc 108197



to top

>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1253_E02
          Length = 166645

 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                         
Query: 430   aaccttgtccttgattatgatccaacaatccttccttgtgttgtgagttgacacctcttt 489
             |||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 39517 aaccttgtccttgactatgatccaacaatccttccttgtgttgtgagtcgatacctcttt 39576

                          
Query: 490   ctttgtatagctc 502
             |||||||||||||
Sbjct: 39577 ctttgtatagctc 39589



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 344   aaaaatccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgt 403
             |||||||||||||| ||||| |  || ||||||||||||||  |||||||||||||||||
Sbjct: 39312 aaaaatccctctgttgaatcaccaccggcattgtttagaatttcatcaccacctggatgt 39371

                     
Query: 404   tcctccac 411
             ||||||||
Sbjct: 39372 tcctccac 39379



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 268   tcatcatcagtcttccaatttgccgatgcagaaatcctcgatgatgtcgaagactc 323
             |||||||||||| | || |||||||||||||||||| |||||||| ||||||||||
Sbjct: 38516 tcatcatcagtccttcagtttgccgatgcagaaatcttcgatgatctcgaagactc 38571



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                            
Query: 344      aaaaatccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgt 403
                |||||||| ||||||||||| |  |||||||||||||| |||||||| || |||||||||
Sbjct: 18215641 aaaaatccttctgtcgaatcaccaccagcattgtttaggatggcatctccccctggatgt 18215700

                        
Query: 404      tcctccac 411
                ||||||||
Sbjct: 18215701 tcctccac 18215708



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                            
Query: 430      aaccttgtccttgattatgatccaacaatccttccttgtgttgtgagttgacacctcttt 489
                |||||| |||||||| |||| ||| |||||| ||||||||||||| | ||| | ||||| 
Sbjct: 18215834 aaccttatccttgatgatgacccagcaatccgtccttgtgttgtgtgctgagatctcttc 18215893

                                      
Query: 490      ctttgtatagctcgtagatgtc 511
                 |||||||||||| || |||||
Sbjct: 18215894 ttttgtatagctcctaaatgtc 18215915



to top

>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0434E03
          Length = 142414

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 344   aaaaatccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatgt 403
             |||||||| ||||||||||| |  |||||||||||||| |||||||| || |||||||||
Sbjct: 37953 aaaaatccttctgtcgaatcaccaccagcattgtttaggatggcatctccccctggatgt 38012

                     
Query: 404   tcctccac 411
             ||||||||
Sbjct: 38013 tcctccac 38020



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 430   aaccttgtccttgattatgatccaacaatccttccttgtgttgtgagttgacacctcttt 489
             |||||| |||||||| |||| ||| |||||| ||||||||||||| | ||| | ||||| 
Sbjct: 38146 aaccttatccttgatgatgacccagcaatccgtccttgtgttgtgtgctgagatctcttc 38205

                                   
Query: 490   ctttgtatagctcgtagatgtc 511
              |||||||||||| || |||||
Sbjct: 38206 ttttgtatagctcctaaatgtc 38227



to top

>gb|AY110094.1| Zea mays CL14316_-3 mRNA sequence
          Length = 606

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 91/113 (80%)
 Strand = Plus / Plus

                                                                       
Query: 290 ccgatgcagaaatcctcgatgatgtcgaagactcgtgtgccatgctgcgggccgaaaaat 349
           ||||||||||||||||||||||| |||||||| |  ||||| || || || ||       
Sbjct: 445 ccgatgcagaaatcctcgatgatatcgaagaccctagtgccgtgttgtggcccnnnnnng 504

                                                                
Query: 350 ccctctgtcgaatcgctgccagcattgtttagaatggcatcaccacctggatg 402
           |||||||| ||||| |  |||||||| |||||||||||||| || ||||||||
Sbjct: 505 ccctctgtggaatcaccaccagcattatttagaatggcatctccgcctggatg 557



to top

>gb|AY267693.1| Bigelowiella natans nitrate reductase mRNA, complete cds; nuclear
           gene for plastid product
          Length = 872

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 390 caccacctggatgttcctccacgtatggagttacatcataaaccttgtccttgattatga 449
           |||| |||||||||| ||| | |||||  ||  |||||||||||||||||||||| || |
Sbjct: 454 caccccctggatgtttctcaaggtatgatgtcgcatcataaaccttgtccttgatgataa 395

                     
Query: 450 tccaacaatc 459
           ||||||||||
Sbjct: 394 tccaacaatc 385



to top

>ref|NM_104749.2| Arabidopsis thaliana B5 #5 AT1G60660 (B5 #5) mRNA, complete cds
          Length = 601

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 380 agaatggcatcaccacctggatgttcctccacgtatggagttacatcataaaccttgtcc 439
           ||||| || |||||||| |||||||| || || || | ||| | |||||| || || || 
Sbjct: 323 agaatagcgtcaccaccaggatgttcttcaacataagaagtaatatcatagactttatct 264

                                           
Query: 440 ttgattatgatccaacaatccttccttgtgtt 471
           |||||||||||||||||||| |||||| ||||
Sbjct: 263 ttgattatgatccaacaatcgttccttttgtt 232



to top

>gb|AY133575.1| Arabidopsis thaliana At1g60660/F8A5_18 mRNA, complete cds
          Length = 366

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 380 agaatggcatcaccacctggatgttcctccacgtatggagttacatcataaaccttgtcc 439
           ||||| || |||||||| |||||||| || || || | ||| | |||||| || || || 
Sbjct: 263 agaatagcgtcaccaccaggatgttcttcaacataagaagtaatatcatagactttatct 204

                                           
Query: 440 ttgattatgatccaacaatccttccttgtgtt 471
           |||||||||||||||||||| |||||| ||||
Sbjct: 203 ttgattatgatccaacaatcgttccttttgtt 172



to top

>gb|AY049297.1| Arabidopsis thaliana At1g60660/F8A5_18 mRNA, complete cds
          Length = 601

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 380 agaatggcatcaccacctggatgttcctccacgtatggagttacatcataaaccttgtcc 439
           ||||| || |||||||| |||||||| || || || | ||| | |||||| || || || 
Sbjct: 323 agaatagcgtcaccaccaggatgttcttcaacataagaagtaatatcatagactttatct 264

                                           
Query: 440 ttgattatgatccaacaatccttccttgtgtt 471
           |||||||||||||||||||| |||||| ||||
Sbjct: 263 ttgattatgatccaacaatcgttccttttgtt 232



to top

>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence
          Length = 120787

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                         
Query: 380   agaatggcatcaccacctggatgttcctccacgtatggagttacatcataaaccttgtcc 439
             ||||| || |||||||| |||||||| || || || | ||| | |||||| || || || 
Sbjct: 66682 agaatagcgtcaccaccaggatgttcttcaacataagaagtaatatcatagactttatct 66741

                                             
Query: 440   ttgattatgatccaacaatccttccttgtgtt 471
             |||||||||||||||||||| |||||| ||||
Sbjct: 66742 ttgattatgatccaacaatcgttccttttgtt 66773



to top

>ref|NM_124258.2| Arabidopsis thaliana ATB5-B AT5G48810 (ATB5-B) mRNA, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 204 acatcataaaccttgccgtcgatgacgatccaacaatcctt 164



to top

>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence
          Length = 184795

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 131   atcagaaccacacagctgggg 151
             |||||||||||||||||||||
Sbjct: 17163 atcagaaccacacagctgggg 17143



to top

>emb|AL391988.14| Human DNA sequence from clone RP11-129M16 on chromosome 10 Contains the
             3' end of the SLC18A2 gene for member 2 solute carrier
             family 18 (vesicular monoamine) and the 3' end of gene
             LOC118987, complete sequence
          Length = 104711

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 387   catcaccacctggatgttcct 407
             |||||||||||||||||||||
Sbjct: 45082 catcaccacctggatgttcct 45102



to top

>gb|AY063073.1| Arabidopsis thaliana putative cytochrome b5 protein (At5g48810)
           mRNA, complete cds
          Length = 454

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 98  acatcataaaccttgccgtcgatgacgatccaacaatcctt 58



to top

>gb|AF370256.1| Arabidopsis thaliana putative cytochrome b5 protein (At5g48810)
           mRNA, complete cds
          Length = 702

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 184 acatcataaaccttgccgtcgatgacgatccaacaatcctt 144



to top

>emb|AJ001370.1|OEJ001370 Olea europaea cytochrome b5 gene-2
          Length = 752

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 387 catcaccacctggatgttcctccacgtatggagttacatcataaacctt 435
           ||||||| || ||||| || |||| | |||| |||||||||||||||||
Sbjct: 215 catcacctccaggatgatcatccatgaatggggttacatcataaacctt 167



to top

>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete
             sequence
          Length = 101598

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 429   aaaccttgtccttgattatga 449
             |||||||||||||||||||||
Sbjct: 74934 aaaccttgtccttgattatga 74914



to top

>emb|BX829982.1|CNS0A1B1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB51ZC06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 622

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 152 acatcataaaccttgccgtcgatgacgatccaacaatcctt 112



to top

>emb|BX841663.1|CNS09YKX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS59ZH11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 620

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 165 acatcataaaccttgccgtcgatgacgatccaacaatcctt 125



to top

>gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromosome unknown, complete
             sequence
          Length = 240555

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 429   aaaccttgtccttgattatga 449
             |||||||||||||||||||||
Sbjct: 81714 aaaccttgtccttgattatga 81694



to top

>gb|AY086738.1| Arabidopsis thaliana clone 27167 mRNA, complete sequence
          Length = 706

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 204 acatcataaaccttgccgtcgatgacgatccaacaatcctt 164



to top

>dbj|AB007802.1| Arabidopsis thaliana mRNA for cytochrome b5, complete cds
          Length = 631

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 422 acatcataaaccttgtccttgattatgatccaacaatcctt 462
           ||||||||||||||| | | ||| | |||||||||||||||
Sbjct: 125 acatcataaaccttgccgtcgatgacgatccaacaatcctt 85



to top

>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 202     tcatcttcaggaaattgcaga 222
               |||||||||||||||||||||
Sbjct: 1735867 tcatcttcaggaaattgcaga 1735887



to top

>gb|AC005880.3|AC005880 citb_43_a_11, complete sequence
          Length = 146388

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 387   catcaccacctggatgttcct 407
             |||||||||||||||||||||
Sbjct: 83908 catcaccacctggatgttcct 83928



to top

>gb|BC058676.1| Mus musculus cache domain containing 1, mRNA (cDNA clone MGC:76350
            IMAGE:6834428), complete cds
          Length = 4981

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 578  gagtgctcccagcacaagaagcac 601
            ||||||||||||||| ||||||||
Sbjct: 4573 gagtgctcccagcaccagaagcac 4596



to top

>gb|BC080313.1| Mus musculus cache domain containing 1, mRNA (cDNA clone
            IMAGE:6854599), partial cds
          Length = 4067

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 578  gagtgctcccagcacaagaagcac 601
            ||||||||||||||| ||||||||
Sbjct: 2857 gagtgctcccagcaccagaagcac 2880



to top

>gb|BC057356.1| Mus musculus cache domain containing 1, mRNA (cDNA clone
            IMAGE:6834152), partial cds
          Length = 4063

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 578  gagtgctcccagcacaagaagcac 601
            ||||||||||||||| ||||||||
Sbjct: 2859 gagtgctcccagcaccagaagcac 2882



to top

>gb|AC155304.4| Mus musculus BAC clone RP24-212I6 from chromosome 8, complete
           sequence
          Length = 165128

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 gttcgttgtcatcatcttca 210
           ||||||||||||||||||||
Sbjct: 624 gttcgttgtcatcatcttca 605



to top

>ref|NM_198037.1| Mus musculus cache domain containing 1 (Cachd1), mRNA
          Length = 4981

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 578  gagtgctcccagcacaagaagcac 601
            ||||||||||||||| ||||||||
Sbjct: 4573 gagtgctcccagcaccagaagcac 4596



to top

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 330    catgctgcgggccgaaaaatccct 353
              ||||||||| ||||||||||||||
Sbjct: 277040 catgctgcgtgccgaaaaatccct 277017



to top

>ref|XM_596512.2| PREDICTED: Bos taurus similar to Doublecortin domain-containing
            protein 2 (RU2S protein) (LOC518323), mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  gttttgttcgttgtcatcat 205
            ||||||||||||||||||||
Sbjct: 1410 gttttgttcgttgtcatcat 1391



to top

>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence
          Length = 198036

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 181   aaacggttttgttcgttgtcatcatctt 208
             |||| |||||||| ||||||||||||||
Sbjct: 86188 aaacagttttgtttgttgtcatcatctt 86161



to top

>ref|XM_455476.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08723g predicted mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 tgttcgttgtcatcatcttc 209
           ||||||||||||||||||||
Sbjct: 485 tgttcgttgtcatcatcttc 466



to top

>ref|XR_003347.1| PREDICTED: Mus musculus similar to pescadillo homolog 1, containing
            BRCT domain (LOC546077), mRNA
          Length = 2141

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  gttcgttgtcatcatcttca 210
            ||||||||||||||||||||
Sbjct: 1445 gttcgttgtcatcatcttca 1426



to top

>ref|XM_991872.1| PREDICTED: Mus musculus cache domain containing 1, transcript
           variant 2 (Cachd1), mRNA
          Length = 1830

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 578 gagtgctcccagcacaagaagcac 601
           ||||||||||||||| ||||||||
Sbjct: 632 gagtgctcccagcaccagaagcac 655



to top

>ref|XM_991843.1| PREDICTED: Mus musculus cache domain containing 1, transcript
           variant 1 (Cachd1), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 578 gagtgctcccagcacaagaagcac 601
           ||||||||||||||| ||||||||
Sbjct: 622 gagtgctcccagcaccagaagcac 645



to top

>ref|XM_991907.1| PREDICTED: Mus musculus cache domain containing 1, transcript variant
            3 (Cachd1), mRNA
          Length = 5321

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 578  gagtgctcccagcacaagaagcac 601
            ||||||||||||||| ||||||||
Sbjct: 4123 gagtgctcccagcaccagaagcac 4146



to top

>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence,
             complete sequence
          Length = 96540

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     taaataaatctgagaaatgtatct 24
             |||||||||||||||||| |||||
Sbjct: 85131 taaataaatctgagaaatatatct 85108



to top

>emb|CR728646.2|CNS0GP64 Tetraodon nigroviridis full-length cDNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 583 ctcccagcacaagaagcaca 602
           ||||||||||||||||||||
Sbjct: 65  ctcccagcacaagaagcaca 84



to top

>emb|AL359755.9| Human DNA sequence from clone RP13-104H2 on chromosome X Contains
             voltage-dependent anion channel 1-like pseudogene
             (VDAC1LP), complete sequence
          Length = 91026

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    acactgctactagtatgaat 109
             ||||||||||||||||||||
Sbjct: 55500 acactgctactagtatgaat 55481



to top

>gb|AY300015.1| Brassica juncea cytoplasmic male sterility-associated cytochrome
            oxidase subunit I (coxI-2) gene, complete cds;
            mitochondrial gene for mitochondrial product
          Length = 6244

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 538  cctttccttcacctttgttt 557
            ||||||||||||||||||||
Sbjct: 1187 cctttccttcacctttgttt 1206



to top

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    tgttcgttgtcatcatcttc 209
              ||||||||||||||||||||
Sbjct: 813838 tgttcgttgtcatcatcttc 813857



to top

>emb|BX927153.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 6/10
          Length = 349584

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 298    gaaatcctcgatgatgtcgaagac 321
              |||||||||||||| |||||||||
Sbjct: 271477 gaaatcctcgatgaagtcgaagac 271454



to top

>emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 6/11
          Length = 346161

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 544    cttcacctttgtttttggat 563
              ||||||||||||||||||||
Sbjct: 174280 cttcacctttgtttttggat 174261



to top

>gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosome 8, complete sequence
          Length = 182428

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gttcgttgtcatcatcttca 210
              ||||||||||||||||||||
Sbjct: 169530 gttcgttgtcatcatcttca 169511



to top

>emb|BX957290.7| Zebrafish DNA sequence from clone CH211-134G9 in linkage group 10,
              complete sequence
          Length = 164388

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 524    cctggaacgtgcatcctttccttcacct 551
              |||||||  |||||||||||||||||||
Sbjct: 124714 cctggaatttgcatcctttccttcacct 124687



to top

>gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, complete sequence
          Length = 133544

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   gctgggggccctggagcagt 164
             ||||||||||||||||||||
Sbjct: 57963 gctgggggccctggagcagt 57944



to top

>dbj|AB234906.1| Verbena x hybrida mRNA for anthocyanidin synthase, complete cds,
            cultivar: Tapien Pink
          Length = 1375

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  ctcctcatcatcagtcttcc 283
            ||||||||||||||||||||
Sbjct: 1125 ctcctcatcatcagtcttcc 1106



to top

>gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, complete sequence
          Length = 133225

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tgggttcacacttgggagct 250
              ||||||||||||||||||||
Sbjct: 108605 tgggttcacacttgggagct 108624



to top

>gb|AC022139.5| Homo sapiens chromosome 5 clone CTD-2255L15, complete sequence
          Length = 112978

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  tgggttcacacttgggagct 250
            ||||||||||||||||||||
Sbjct: 7840 tgggttcacacttgggagct 7859



to top

>gb|AC159911.7| Mus musculus 10 BAC RP23-465M5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203420

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 610    atatgaggatgataatttccatgg 633
              |||||||||||| |||||||||||
Sbjct: 128523 atatgaggatgaaaatttccatgg 128546



to top

>dbj|AK004514.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1190007F10
           product:unclassifiable, full insert sequence
          Length = 289

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 578 gagtgctcccagcacaagaagcac 601
           ||||||||||||||| ||||||||
Sbjct: 79  gagtgctcccagcaccagaagcac 102



to top

>gb|DQ019482.1| Lilium longiflorum clone LP26 cytochome b5-like mRNA, partial
           sequence
          Length = 692

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 387 catcaccacctggatgttcctccacgtatggagttacatcataaaccttgtccttgatta 446
           |||||||||| ||||| |||||||   |||| || |||||||| |||||| |   ||| |
Sbjct: 174 catcaccaccaggatggtcctccataaatggggtgacatcatacaccttgccagagatga 115

                           
Query: 447 tgatccaacaatcctt 462
           ||| ||||||||||||
Sbjct: 114 tgagccaacaatcctt 99



to top

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 298     gaaatcctcgatgatgtcgaagac 321
               |||||||||||||| |||||||||
Sbjct: 2046869 gaaatcctcgatgaagtcgaagac 2046846



to top

>gb|AC008278.3|AC008278 Homo sapiens BAC clone RP11-422A6 from 2, complete sequence
          Length = 136868

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 610   atatgaggatgataatttcc 629
             ||||||||||||||||||||
Sbjct: 14175 atatgaggatgataatttcc 14194



to top

>emb|BX248502.17| Zebrafish DNA sequence from clone DKEY-284M10 in linkage group 8,
              complete sequence
          Length = 215273

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 652    gaacaatgtataattgactg 671
              ||||||||||||||||||||
Sbjct: 127357 gaacaatgtataattgactg 127376



to top

>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 538    cctttccttcacctttgttt 557
              ||||||||||||||||||||
Sbjct: 356772 cctttccttcacctttgttt 356753



to top

>emb|AL592225.17| Mouse DNA sequence from clone RP23-278M14 on chromosome 1, complete
              sequence
          Length = 183397

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 539    ctttccttcacctttgtttt 558
              ||||||||||||||||||||
Sbjct: 179638 ctttccttcacctttgtttt 179657



to top

>emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chromosome 4, complete
              sequence
          Length = 184644

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 578    gagtgctcccagcacaagaagcac 601
              ||||||||||||||| ||||||||
Sbjct: 140759 gagtgctcccagcaccagaagcac 140782



to top

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 508     tgtcgttcgatttccccctg 527
               ||||||||||||||||||||
Sbjct: 2412353 tgtcgttcgatttccccctg 2412372



to top

>gb|J05042.1|RABCOLVIII Rabbit type VIII collagen alpha-1 chain mRNA, complete cds
          Length = 2415

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  cacagctgggggccctggag 160
            ||||||||||||||||||||
Sbjct: 1899 cacagctgggggccctggag 1880


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,976,531
Number of Sequences: 3902068
Number of extensions: 6976531
Number of successful extensions: 136863
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136529
Number of HSP's gapped (non-prelim): 330
length of query: 727
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 704
effective length of database: 17,143,297,704
effective search space: 12068881583616
effective search space used: 12068881583616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top