>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)|
           [Contains: Micronuclear linker histone-alpha;
           Micronuclear linker histone-beta; Micronuclear linker
           histone-delta; Micronuclear linker histone-gamma]
          Length = 633

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = -1

Query: 452 KRKASSXXXXXXXXDFVKTNSATKGKTTAQKKRKASSXXXXXXXXDFVKTNSATKGK--- 282
           KR +SS           K++S+   K+++ + RKASS           + +S++KG+   
Sbjct: 266 KRSSSSKNKKSSSSKNKKSSSSKGRKSSSSRGRKASSSKNRKSSKSKDRKSSSSKGRKSS 325

Query: 281 -TTAQKKRKVSS 249
            ++   KRK SS
Sbjct: 326 SSSKSNKRKASS 337



 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -1

Query: 452 KRKASSXXXXXXXXDFVKTNSATKGKTTAQKKRKASSXXXXXXXXDFVKTNSATKGKTTA 273
           +RKASS           +  S +KG+  +   ++ SS           K +S++K K ++
Sbjct: 226 RRKASSSKDQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSS 285

Query: 272 QKKRKVSS 249
             K + SS
Sbjct: 286 SSKGRKSS 293

>GALS_SALTY (P41030) HTH-type transcriptional regulator galS (Mgl repressor and|
           galactose ultrainduction factor)
          Length = 340

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +1

Query: 34  SEVHTHHSVSAWKDKIKITITHCFLTFILIQHNVNGKQRAHLV 162
           +++ T  ++      + IT THCF+  ++ +H+V  +Q A L+
Sbjct: 296 AKIATELALQGAAGTLDITATHCFMPTLVRRHSVAWRQNAVLI 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,624,948
Number of Sequences: 219361
Number of extensions: 680742
Number of successful extensions: 1314
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)