ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15g13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
2ref|XM_480355.1| Oryza sativa (japonica cultivar-group), mRNA 210 4e-51
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 113 8e-22
4dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic D... 113 8e-22
5gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, com... 42 2.3
6ref|XM_446957.1| Candida glabrata CBS138, CAGL0H03751g partial mRNA 42 2.3
7emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 42 2.3
8gb|AY427798.1| Breda virus strain Breda 1, complete genome 42 2.3
9gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome... 40 9.3
10ref|XM_477701.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
11gb|AC154025.12| Mus musculus 6 BAC RP24-539J4 (Roswell Park Canc... 40 9.3
12gb|BC037075.1| Mus musculus RIKEN cDNA 2700062C07 gene, mRNA (cD... 40 9.3
13gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 9.3
14ref|NM_026529.2| Mus musculus RIKEN cDNA 2700062C07 gene (270006... 40 9.3
15emb|CT027659.2| Macaca mulatta chromosome 9 BAC CH250-288D8, com... 40 9.3
16ref|XM_385766.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 9.3
17gb|AC004382.1|HUAC004382 Homo sapiens Chromosome 16 BAC clone CI... 40 9.3
18gb|AC104688.2| Homo sapiens BAC clone RP11-123O1 from 7, complet... 40 9.3
19emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on ... 40 9.3
20emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.3
21emb|CR937026.1|PT085P01 Pan troglodytes chromosome 11 BAC PTB-08... 40 9.3
22gb|AC112136.6| Homo sapiens 3 BAC RP11-360A12 (Roswell Park Canc... 40 9.3
23gb|AY118521.1| Drosophila melanogaster LD17982 full insert cDNA 40 9.3
24ref|NM_136045.2| Drosophila melanogaster CG10414-RA (CG10414), mRNA 40 9.3
25dbj|AK140270.1| Mus musculus adult male corpora quadrigemina cDN... 40 9.3
26ref|NM_001024905.1| Rattus norvegicus similar to RIKEN cDNA 2700... 40 9.3
27gb|BC097984.1| Rattus norvegicus similar to RIKEN cDNA 2700062C0... 40 9.3
28gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 9.3
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
31gb|AC009052.8| Homo sapiens chromosome 16 clone RP11-250E14, com... 40 9.3
32dbj|AB056821.1| Macaca fascicularis brain cDNA clone:QflA-15882,... 40 9.3
33ref|XM_577090.1| PREDICTED: Rattus norvegicus similar to Proteas... 40 9.3
34dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
35dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
36dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
37dbj|AK108097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
38gb|AC007137.20|AC007137 Drosophila melanogaster, chromosome 2L, ... 40 9.3
39gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68... 40 9.3
40dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.3
41dbj|AP000908.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.3
42gb|U73443.1|MMU73443 Homo sapiens 5HT3 serotonin receptor gene, ... 40 9.3 
>dbj|AK101717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060O03, full
            insert sequence
          Length = 3342

 Score =  212 bits (107), Expect = 1e-51
 Identities = 323/394 (81%), Gaps = 6/394 (1%)
 Strand = Plus / Minus

                                                                        
Query: 280  atcatatagacatggtcatgggaaggatcttctgggacgccgcctgcggcttgatctccc 339
            ||||||||||||||||||| ||||| || |||||   ||  |  ||||| || || ||||
Sbjct: 3069 atcatatagacatggtcattggaagaattttctgacccgttggttgcggtttaatttccc 3010

                                                                        
Query: 340  acgaggccttctcggccgactctccggggagaacgaaaggcagcgagatctccttgatca 399
            |||| ||||| ||  | |||||| | ||||||| ||||||||  || |||||||||||||
Sbjct: 3009 acgaagccttttcatcagactcttcagggagaatgaaaggcaatgaaatctccttgatca 2950

                                                                        
Query: 400  tcaggtcgccgcagaaggggcactcgctcgccacggcgtcgtccagctgtgacctcagct 459
            |||| |||||||||||||||||||||||||| || || || |||||||| ||||||| ||
Sbjct: 2949 tcagatcgccgcagaaggggcactcgctcgctacagcatcatccagctgggacctcaact 2890

                                                                        
Query: 460  tgtcgactgatggcgtactactgacagtaggttcaccgttcccggtcccgccattgtctt 519
            |||| | || || ||    ||||| | ||| |||||| |||  | | |||||||| || |
Sbjct: 2889 tgtcaattggtgtcg---cactgataatagattcaccattcatgtttccgccattttcct 2833

                                                                        
Query: 520  ttgctgctttcctgtccatcaagcttagctgcttctgaaggttcagtattctctcagctt 579
            ||||||||||||||||||| | ||| ||| |||| || |||| ||||||| | |||||||
Sbjct: 2832 ttgctgctttcctgtccattaggctaagccgcttttggaggtccagtattttttcagctt 2773

                                                                        
Query: 580  gtacttggctg---gtgcagcgagttacatgggcgatcaaacaattcgcatggaaggcat 636
            ||  |||||||    | || ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 2772 gtgtttggctgctattacaacgagttacatgtgcgatcaaacaattcgcatgaaaggcat 2713

                                              
Query: 637  gtccgcagggaaacacatanaagggggccatgtg 670
            |||| || ||||||||||| ||||||||||||||
Sbjct: 2712 gtccacaaggaaacacataaaagggggccatgtg 2679
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>ref|XM_480355.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3003

 Score =  210 bits (106), Expect = 4e-51
 Identities = 322/393 (81%), Gaps = 6/393 (1%)
 Strand = Plus / Minus

                                                                        
Query: 281  tcatatagacatggtcatgggaaggatcttctgggacgccgcctgcggcttgatctccca 340
            |||||||||||||||||| ||||| || |||||   ||  |  ||||| || || |||||
Sbjct: 3003 tcatatagacatggtcattggaagaattttctgacccgttggttgcggtttaatttccca 2944

                                                                        
Query: 341  cgaggccttctcggccgactctccggggagaacgaaaggcagcgagatctccttgatcat 400
            ||| ||||| ||  | |||||| | ||||||| ||||||||  || ||||||||||||||
Sbjct: 2943 cgaagccttttcatcagactcttcagggagaatgaaaggcaatgaaatctccttgatcat 2884

                                                                        
Query: 401  caggtcgccgcagaaggggcactcgctcgccacggcgtcgtccagctgtgacctcagctt 460
            ||| |||||||||||||||||||||||||| || || || |||||||| ||||||| |||
Sbjct: 2883 cagatcgccgcagaaggggcactcgctcgctacagcatcatccagctgggacctcaactt 2824

                                                                        
Query: 461  gtcgactgatggcgtactactgacagtaggttcaccgttcccggtcccgccattgtcttt 520
            ||| | || || ||    ||||| | ||| |||||| |||  | | |||||||| || ||
Sbjct: 2823 gtcaattggtgtcg---cactgataatagattcaccattcatgtttccgccattttcctt 2767

                                                                        
Query: 521  tgctgctttcctgtccatcaagcttagctgcttctgaaggttcagtattctctcagcttg 580
            |||||||||||||||||| | ||| ||| |||| || |||| ||||||| | ||||||||
Sbjct: 2766 tgctgctttcctgtccattaggctaagccgcttttggaggtccagtattttttcagcttg 2707

                                                                        
Query: 581  tacttggctg---gtgcagcgagttacatgggcgatcaaacaattcgcatggaaggcatg 637
            |  |||||||    | || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2706 tgtttggctgctattacaacgagttacatgtgcgatcaaacaattcgcatgaaaggcatg 2647

                                             
Query: 638  tccgcagggaaacacatanaagggggccatgtg 670
            ||| || ||||||||||| ||||||||||||||
Sbjct: 2646 tccacaaggaaacacataaaagggggccatgtg 2614
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  113 bits (57), Expect = 8e-22
 Identities = 147/177 (83%)
 Strand = Plus / Minus

                                                                           
Query: 280     atcatatagacatggtcatgggaaggatcttctgggacgccgcctgcggcttgatctccc 339
               ||||||||||||||||||| ||||| || |||||   ||  |  ||||| || || ||||
Sbjct: 4574122 atcatatagacatggtcattggaagaattttctgacccgttggttgcggtttaatttccc 4574063

                                                                           
Query: 340     acgaggccttctcggccgactctccggggagaacgaaaggcagcgagatctccttgatca 399
               |||| ||||| ||  | |||||| | ||||||| ||||||||  || |||||||||||||
Sbjct: 4574062 acgaagccttttcatcagactcttcagggagaatgaaaggcaatgaaatctccttgatca 4574003

                                                                        
Query: 400     tcaggtcgccgcagaaggggcactcgctcgccacggcgtcgtccagctgtgacctca 456
               |||| |||||||||||||||||||||||||| || || || |||||||| |||||||
Sbjct: 4574002 tcagatcgccgcagaaggggcactcgctcgctacagcatcatccagctgggacctca 4573946



 Score =  109 bits (55), Expect = 1e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                           
Query: 597     cgagttacatgggcgatcaaacaattcgcatggaaggcatgtccgcagggaaacacatan 656
               ||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||| 
Sbjct: 4573633 cgagttacatgtgcgatcaaacaattcgcatgaaaggcatgtccacaaggaaacacataa 4573574

                             
Query: 657     aagggggccatgtg 670
               ||||||||||||||
Sbjct: 4573573 aagggggccatgtg 4573560



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                           
Query: 507     ccgccattgtcttttgctgctttcctgtccatcaagcttagctgcttctgaaggttcagt 566
               |||||||| || |||||||||||||||||||| | ||| ||| |||| || |||| ||||
Sbjct: 4573822 ccgccattttcctttgctgctttcctgtccattaggctaagccgcttttggaggtccagt 4573763

                  
Query: 567     att 569
               |||
Sbjct: 4573762 att 4573760
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>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1120_C08
          Length = 150300

 Score =  113 bits (57), Expect = 8e-22
 Identities = 147/177 (83%)
 Strand = Plus / Minus

                                                                         
Query: 280   atcatatagacatggtcatgggaaggatcttctgggacgccgcctgcggcttgatctccc 339
             ||||||||||||||||||| ||||| || |||||   ||  |  ||||| || || ||||
Sbjct: 97970 atcatatagacatggtcattggaagaattttctgacccgttggttgcggtttaatttccc 97911

                                                                         
Query: 340   acgaggccttctcggccgactctccggggagaacgaaaggcagcgagatctccttgatca 399
             |||| ||||| ||  | |||||| | ||||||| ||||||||  || |||||||||||||
Sbjct: 97910 acgaagccttttcatcagactcttcagggagaatgaaaggcaatgaaatctccttgatca 97851

                                                                      
Query: 400   tcaggtcgccgcagaaggggcactcgctcgccacggcgtcgtccagctgtgacctca 456
             |||| |||||||||||||||||||||||||| || || || |||||||| |||||||
Sbjct: 97850 tcagatcgccgcagaaggggcactcgctcgctacagcatcatccagctgggacctca 97794



 Score =  109 bits (55), Expect = 1e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                         
Query: 597   cgagttacatgggcgatcaaacaattcgcatggaaggcatgtccgcagggaaacacatan 656
             ||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||| 
Sbjct: 97481 cgagttacatgtgcgatcaaacaattcgcatgaaaggcatgtccacaaggaaacacataa 97422

                           
Query: 657   aagggggccatgtg 670
             ||||||||||||||
Sbjct: 97421 aagggggccatgtg 97408



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 507   ccgccattgtcttttgctgctttcctgtccatcaagcttagctgcttctgaaggttcagt 566
             |||||||| || |||||||||||||||||||| | ||| ||| |||| || |||| ||||
Sbjct: 97670 ccgccattttcctttgctgctttcctgtccattaggctaagccgcttttggaggtccagt 97611

                
Query: 567   att 569
             |||
Sbjct: 97610 att 97608
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>gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, complete sequence
          Length = 169209

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    tacatctttcaaaaaccaatg 89
             |||||||||||||||||||||
Sbjct: 84245 tacatctttcaaaaaccaatg 84225
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>ref|XM_446957.1| Candida glabrata CBS138, CAGL0H03751g partial mRNA
          Length = 3066

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 544 ttagctgcttctgaaggttca 564
           |||||||||||||||||||||
Sbjct: 577 ttagctgcttctgaaggttca 597
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 544    ttagctgcttctgaaggttca 564
              |||||||||||||||||||||
Sbjct: 346593 ttagctgcttctgaaggttca 346573
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>gb|AY427798.1| Breda virus strain Breda 1, complete genome
          Length = 28475

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 66   aattacatctttcaaaaacca 86
            |||||||||||||||||||||
Sbjct: 2563 aattacatctttcaaaaacca 2543
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>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete sequence
          Length = 198672

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    ctgctttcctgtccatcaag 542
              ||||||||||||||||||||
Sbjct: 131617 ctgctttcctgtccatcaag 131636
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>ref|XM_477701.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 cagccgtcacaacaaaatcc 244
           ||||||||||||||||||||
Sbjct: 628 cagccgtcacaacaaaatcc 609
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>gb|AC154025.12| Mus musculus 6 BAC RP24-539J4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 165821

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 198    aaacagccaacaaatacagaaact 221
              |||||||||||||| |||||||||
Sbjct: 134322 aaacagccaacaaacacagaaact 134299
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>gb|BC037075.1| Mus musculus RIKEN cDNA 2700062C07 gene, mRNA (cDNA clone MGC:46767
           IMAGE:5038294), complete cds
          Length = 1097

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 aagaaagaaacacttctctc 191
           ||||||||||||||||||||
Sbjct: 636 aagaaagaaacacttctctc 655
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 317     cgccgcctgcggcttgatct 336
               ||||||||||||||||||||
Sbjct: 2574427 cgccgcctgcggcttgatct 2574408
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>ref|NM_026529.2| Mus musculus RIKEN cDNA 2700062C07 gene (2700062C07Rik), mRNA
          Length = 1097

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 aagaaagaaacacttctctc 191
           ||||||||||||||||||||
Sbjct: 636 aagaaagaaacacttctctc 655
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>emb|CT027659.2| Macaca mulatta chromosome 9 BAC CH250-288D8, complete sequence
          Length = 175570

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   cagccaacaaatacagaaac 220
             ||||||||||||||||||||
Sbjct: 51241 cagccaacaaatacagaaac 51260
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>ref|XM_385766.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05590.1)
            partial mRNA
          Length = 2553

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  tcttttgctgctttcctgtc 535
            ||||||||||||||||||||
Sbjct: 1559 tcttttgctgctttcctgtc 1540
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>gb|AC004382.1|HUAC004382 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-152E5, complete sequence
          Length = 217873

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    caaatacagaaactgcacag 227
              ||||||||||||||||||||
Sbjct: 104542 caaatacagaaactgcacag 104561
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>gb|AC104688.2| Homo sapiens BAC clone RP11-123O1 from 7, complete sequence
          Length = 47088

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aagaaagaaacacttctctc 191
             ||||||||||||||||||||
Sbjct: 44043 aagaaagaaacacttctctc 44062
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>emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on chromosome Xq25 Contains the
              3' end of the HS6ST2 gene for heparan sulfate
              6-O-sulfotransferase 2, a novel gene and the 3' end of a
              novel gene, complete sequence
          Length = 184975

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     attacatctttcaaaaaccaatgg 90
              |||||||||| |||||||||||||
Sbjct: 100920 attacatcttgcaaaaaccaatgg 100943
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    cgccgcctgcggcttgatct 336
              ||||||||||||||||||||
Sbjct: 754469 cgccgcctgcggcttgatct 754450
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>emb|CR937026.1|PT085P01 Pan troglodytes chromosome 11 BAC PTB-085P01, complete sequence
          Length = 218832

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   cagccaacaaatacagaaac 220
             ||||||||||||||||||||
Sbjct: 81772 cagccaacaaatacagaaac 81753
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>gb|AC112136.6| Homo sapiens 3 BAC RP11-360A12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 43707

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   atgcatgatgaagaaagaaa 181
             ||||||||||||||||||||
Sbjct: 29052 atgcatgatgaagaaagaaa 29033
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>gb|AY118521.1| Drosophila melanogaster LD17982 full insert cDNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 8   aatacgcatttgtaaccgcaactg 31
           |||||||||||||| |||||||||
Sbjct: 664 aatacgcatttgtagccgcaactg 641
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>ref|NM_136045.2| Drosophila melanogaster CG10414-RA (CG10414), mRNA
          Length = 2424

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 8   aatacgcatttgtaaccgcaactg 31
           |||||||||||||| |||||||||
Sbjct: 664 aatacgcatttgtagccgcaactg 641
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>dbj|AK140270.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230377D21 product:hypothetical
            protein, full insert sequence
          Length = 2464

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 523  ctgctttcctgtccatcaag 542
            ||||||||||||||||||||
Sbjct: 1061 ctgctttcctgtccatcaag 1042
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>ref|NM_001024905.1| Rattus norvegicus similar to RIKEN cDNA 2700062C07 (MGC116121),
           mRNA
          Length = 1107

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 aagaaagaaacacttctctc 191
           ||||||||||||||||||||
Sbjct: 633 aagaaagaaacacttctctc 652
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>gb|BC097984.1| Rattus norvegicus similar to RIKEN cDNA 2700062C07, mRNA (cDNA
           clone MGC:116121 IMAGE:7444421), complete cds
          Length = 1107

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 aagaaagaaacacttctctc 191
           ||||||||||||||||||||
Sbjct: 633 aagaaagaaacacttctctc 652
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    cgccgcctgcggcttgatct 336
              ||||||||||||||||||||
Sbjct: 485396 cgccgcctgcggcttgatct 485377
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      cagccgtcacaacaaaatcc 244
                ||||||||||||||||||||
Sbjct: 13351519 cagccgtcacaacaaaatcc 13351500
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 425      gctcgccacggcgtcgtcca 444
                ||||||||||||||||||||
Sbjct: 30420538 gctcgccacggcgtcgtcca 30420557
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>gb|AC009052.8| Homo sapiens chromosome 16 clone RP11-250E14, complete sequence
          Length = 200557

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    caaatacagaaactgcacag 227
              ||||||||||||||||||||
Sbjct: 152482 caaatacagaaactgcacag 152501
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>dbj|AB056821.1| Macaca fascicularis brain cDNA clone:QflA-15882, similar to human
            valosin-containing protein (p97)/p47 (VCIP135), mRNA,
            NM_025054.1
          Length = 3156

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  agccaacaaatacagaaact 221
            ||||||||||||||||||||
Sbjct: 2841 agccaacaaatacagaaact 2822
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>ref|XM_577090.1| PREDICTED: Rattus norvegicus similar to Proteasome subunit beta
           type 3 (Proteasome theta chain) (Proteasome chain 13)
           (Proteasome component C10-II) (LOC363591), mRNA
          Length = 702

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 tcatgggaaggatcttctgg 314
           ||||||||||||||||||||
Sbjct: 220 tcatgggaaggatcttctgg 201
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>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017G10
          Length = 166700

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   gctcgccacggcgtcgtcca 444
             ||||||||||||||||||||
Sbjct: 57899 gctcgccacggcgtcgtcca 57918
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>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1123_B01
          Length = 105736

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   cagccgtcacaacaaaatcc 244
             ||||||||||||||||||||
Sbjct: 65957 cagccgtcacaacaaaatcc 65938
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>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0025D09
          Length = 142593

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    cagccgtcacaacaaaatcc 244
              ||||||||||||||||||||
Sbjct: 139382 cagccgtcacaacaaaatcc 139363
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>dbj|AK108097.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A09, full
           insert sequence
          Length = 859

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 gctcgccacggcgtcgtcca 444
           ||||||||||||||||||||
Sbjct: 174 gctcgccacggcgtcgtcca 155
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>gb|AC007137.20|AC007137 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone
             BACR25C02, complete sequence
          Length = 171454

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     aatacgcatttgtaaccgcaactg 31
             |||||||||||||| |||||||||
Sbjct: 48204 aatacgcatttgtagccgcaactg 48227
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>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete
              sequence
          Length = 260027

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      aatacgcatttgtaaccgcaactg 31
              |||||||||||||| |||||||||
Sbjct: 194329 aatacgcatttgtagccgcaactg 194352
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>dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2238L14, complete
              sequence
          Length = 124167

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    atgaagaaagaaacacttct 188
              ||||||||||||||||||||
Sbjct: 105919 atgaagaaagaaacacttct 105938
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>dbj|AP000908.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-711K22, complete
             sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   atgaagaaagaaacacttct 188
             ||||||||||||||||||||
Sbjct: 24289 atgaagaaagaaacacttct 24308
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>gb|U73443.1|MMU73443 Homo sapiens 5HT3 serotonin receptor gene, partial cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 atgaagaaagaaacacttct 188
           ||||||||||||||||||||
Sbjct: 559 atgaagaaagaaacacttct 578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,008,810
Number of Sequences: 3902068
Number of extensions: 5008810
Number of successful extensions: 86648
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86467
Number of HSP's gapped (non-prelim): 181
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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