ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15g12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 611 bits (308), Expect = e-172 Identities = 362/383 (94%) Strand = Plus / Minus Query: 1 ggcttccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttgg 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 521 ggcttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatgg 462 Query: 61 ccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcacca 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 461 ccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcacca 402 Query: 121 tcattacagaaacgggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttgg 180 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 401 tcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttgg 342 Query: 181 ccacggaaaacattgtccacgttgtcacagacagaattcctgcntccaatggtgcagtac 240 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 341 ccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtac 282 Query: 241 tgagtgacatntggttcaccggattcagggagaagattcagtttaggatagtcactanga 300 || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 281 tgcgtgacatctggttcaccggattcagggagaagattcagtttaggatagtcactaggg 222 Query: 301 cattttgaaccgcttatgattttacaaccacaancacctgcacanactgnacgggaacca 360 ||||||| ||| |||||||||||||||| |||| ||||||| || |||| |||||||||| Sbjct: 221 cattttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaacca 162 Query: 361 ccggcgaaacngcaagtgttgta 383 || |||||| |||||||||||| Sbjct: 161 cccgcgaaatggcaagtgttgta 139
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 607 bits (306), Expect = e-170 Identities = 360/381 (94%) Strand = Plus / Minus Query: 3 cttccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggcc 62 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 526 cttcgatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggcc 467 Query: 63 atagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatc 122 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 466 atagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatc 407 Query: 123 attacagaaacgggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggcc 182 |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 406 attacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggcc 347 Query: 183 acggaaaacattgtccacgttgtcacagacagaattcctgcntccaatggtgcagtactg 242 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 346 acggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactg 287 Query: 243 agtgacatntggttcaccggattcagggagaagattcagtttaggatagtcactangaca 302 |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | || Sbjct: 286 agtgacatctggttcaccggattcagggagaagattaagtttaggatagtcactagggca 227 Query: 303 ttttgaaccgcttatgattttacaaccacaancacctgcacanactgnacgggaaccacc 362 ||||| ||| |||||||||||||||| |||| ||||||| || |||| |||||||||||| Sbjct: 226 ttttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacc 167 Query: 363 ggcgaaacngcaagtgttgta 383 ||||||| |||||||||||| Sbjct: 166 cgcgaaacggcaagtgttgta 146
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 533 bits (269), Expect = e-148 Identities = 320/339 (94%) Strand = Plus / Minus Query: 3 cttccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggcc 62 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 346 cttcgatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggcc 287 Query: 63 atagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatc 122 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 286 atagaaatcatgcacaagaaggcatgattaggattcaacagactgaatgactgcaccatc 227 Query: 123 attacagaaacgggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggcc 182 |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 226 attacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggcc 167 Query: 183 acggaaaacattgtccacgttgtcacagacagaattcctgcntccaatggtgcagtactg 242 | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 166 atggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactg 107 Query: 243 agtgacatntggttcaccggattcagggagaagattcagtttaggatagtcactangaca 302 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | || Sbjct: 106 agtgacatcgggttcaccggattcagggagaagattaagtttaggatagtcactagggca 47 Query: 303 ttttgaaccgcttatgattttacaaccacaancacctgc 341 ||||| ||| |||||||||||||||| |||| ||||||| Sbjct: 46 ttttggaccacttatgattttacaacgacaagcacctgc 8
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 440 bits (222), Expect = e-120 Identities = 330/369 (89%) Strand = Plus / Minus Query: 15 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 74 |||||||||||||||| || || | ||||||| | |||||||||||||||||||||||| Sbjct: 373 tgatggtatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatg 314 Query: 75 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 134 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 313 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 254 Query: 135 ggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggccacggaaaacatt 194 ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 253 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 194 Query: 195 gtccacgttgtcacagacagaattcctgcntccaatggtgcagtactgagtgacatntgg 254 ||||| |||||||||||| ||| |||||| |||||| |||||||||| ||| ||| ||| Sbjct: 193 gtccaggttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttgg 134 Query: 255 ttcaccggattcagggagaagattcagtttaggatagtcactangacattttgaaccgct 314 ||||||||||||||||||||||||||| ||||||||||| ||| |||| ||| ||||| Sbjct: 133 ttcaccggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgct 74 Query: 315 tatgattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngca 374 ||||||||||||||||||| || ||| || |||| ||||||||||||||||||| ||| Sbjct: 73 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggca 14 Query: 375 agtgttgta 383 | |||||| Sbjct: 13 ggcgttgta 5
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 440 bits (222), Expect = e-120 Identities = 330/369 (89%) Strand = Plus / Minus Query: 15 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 74 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 459 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 400 Query: 75 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 134 | |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 399 cccaagaaggcatgattaggcttcaagagactgaatgacttcaccatcattacagaaacg 340 Query: 135 ggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggccacggaaaacatt 194 ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 339 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 280 Query: 195 gtccacgttgtcacagacagaattcctgcntccaatggtgcagtactgagtgacatntgg 254 ||||| |||||||||||| ||| |||||| |||||| |||||||||| ||| ||| ||| Sbjct: 279 gtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttgg 220 Query: 255 ttcaccggattcagggagaagattcagtttaggatagtcactangacattttgaaccgct 314 ||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||| ||||| Sbjct: 219 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 160 Query: 315 tatgattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngca 374 ||||||||||||||||||| || ||| || |||| ||||||||||| ||||||| ||| Sbjct: 159 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 100 Query: 375 agtgttgta 383 | |||||| Sbjct: 99 ggcgttgta 91
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 440 bits (222), Expect = e-120 Identities = 330/369 (89%) Strand = Plus / Minus Query: 15 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 74 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 75 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 134 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 135 ggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggccacggaaaacatt 194 ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 195 gtccacgttgtcacagacagaattcctgcntccaatggtgcagtactgagtgacatntgg 254 ||||| |||||||||||| ||| ||| || |||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 255 ttcaccggattcagggagaagattcagtttaggatagtcactangacattttgaaccgct 314 ||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||| ||||| Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 315 tatgattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngca 374 ||||||||||||||||||| || ||| || |||| ||||||||||| ||||||| ||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 375 agtgttgta 383 | |||||| Sbjct: 172 ggcgttgta 164
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 440 bits (222), Expect = e-120 Identities = 330/369 (89%) Strand = Plus / Minus Query: 15 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 74 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 75 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 134 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 135 ggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggccacggaaaacatt 194 ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 195 gtccacgttgtcacagacagaattcctgcntccaatggtgcagtactgagtgacatntgg 254 ||||| |||||||||||| ||| ||| || |||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 255 ttcaccggattcagggagaagattcagtttaggatagtcactangacattttgaaccgct 314 ||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||| ||||| Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 315 tatgattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngca 374 ||||||||||||||||||| || ||| || |||| ||||||||||| ||||||| ||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 375 agtgttgta 383 | |||||| Sbjct: 172 ggcgttgta 164
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 440 bits (222), Expect = e-120 Identities = 330/369 (89%) Strand = Plus / Minus Query: 15 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 74 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 75 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 134 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 135 ggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggccacggaaaacatt 194 ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 195 gtccacgttgtcacagacagaattcctgcntccaatggtgcagtactgagtgacatntgg 254 ||||| |||||||||||| ||| ||| || |||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 255 ttcaccggattcagggagaagattcagtttaggatagtcactangacattttgaaccgct 314 ||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||| ||||| Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 315 tatgattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngca 374 ||||||||||||||||||| || ||| || |||| ||||||||||| ||||||| ||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 375 agtgttgta 383 | |||||| Sbjct: 172 ggcgttgta 164
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 357 bits (180), Expect = 2e-95 Identities = 253/280 (90%) Strand = Plus / Minus Query: 90 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcncatgcgttgct 149 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 150 gcanagtcccatgtcgaatttcatctcttggccacggaaaacattgtccacgttgtcaca 209 ||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 210 gacagaattcctgcntccaatggtgcagtactgagtgacatntggttcaccggattcagg 269 ||| ||| |||||| |||||| |||||||||| ||| ||| |||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 270 gagaagattcagtttaggatagtcactangacattttgaaccgcttatgattttacaacc 329 |||||||||||| ||||||||||| ||| ||||| ||| |||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 330 acaancacctgcacanactgnacgggaaccaccggcgaaa 369 |||| || ||| || |||| |||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaa 135
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 351 bits (177), Expect = 1e-93 Identities = 187/191 (97%) Strand = Plus / Minus Query: 1 ggcttccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttgg 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2221 ggcttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttgg 2162 Query: 61 ccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcacca 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2161 ccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcacca 2102 Query: 121 tcattacagaaacgggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttgg 180 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2101 tcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttgg 2042 Query: 181 ccacggaaaac 191 ||||||||||| Sbjct: 2041 ccacggaaaac 2031 Score = 172 bits (87), Expect = 5e-40 Identities = 115/126 (91%) Strand = Plus / Minus Query: 258 accggattcagggagaagattcagtttaggatagtcactangacattttgaaccgcttat 317 |||||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 318 gattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngcaagt 377 ||||||||||| |||| ||||||| || |||| |||||||||||| ||||||| |||||| Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 378 gttgta 383 |||||| Sbjct: 1656 gttgta 1651 Score = 111 bits (56), Expect = 2e-21 Identities = 66/70 (94%) Strand = Plus / Minus Query: 191 cattgtccacgttgtcacagacagaattcctgcntccaatggtgcagtactgagtgacat 250 ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 251 ntggttcacc 260 ||||||||| Sbjct: 1877 ctggttcacc 1868
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 252 bits (127), Expect = 7e-64 Identities = 164/177 (92%) Strand = Plus / Minus Query: 15 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 74 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171 Query: 75 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 134 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111 Query: 135 ggcncatgcgttgctgcanagtcccatgtcgaatttcatctcttggccacggaaaac 191 ||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054 Score = 125 bits (63), Expect = 1e-25 Identities = 109/126 (86%) Strand = Plus / Minus Query: 258 accggattcagggagaagattcagtttaggatagtcactangacattttgaaccgcttat 317 |||||||||||||||||||||||| ||||||||||| ||| |||| ||| |||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 318 gattttacaaccacaancacctgcacanactgnacgggaaccaccggcgaaacngcaagt 377 |||||||||||||||| || ||| || |||| ||||||||||||||||||| ||| | Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 378 gttgta 383 |||||| Sbjct: 1677 gttgta 1672
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 157 bits (79), Expect = 3e-35 Identities = 198/239 (82%) Strand = Plus / Minus Query: 53 gaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatga 112 ||||| ||||| ||||||||||||||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 113 ctgcaccatcattacagaaacgggcncatgcgttgctgcanagtcccatgtcgaatttca 172 | ||||| | ||||||||||| | ||| | ||| |||| ||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 173 tctcttggccacggaaaacattgtccacgttgtcacagacagaattcctgcntccaatgg 232 ||||||||||| | | ||||||||||| ||||||||| || ||| || ||| ||| |||| Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 233 tgcagtactgagtgacatntggttcaccggattcagggagaagattcagtttaggatag 291 ||||||||| |||||||| ||||||||||||||| | ||||||| |||||||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatag 258
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 73.8 bits (37), Expect = 4e-10 Identities = 110/135 (81%) Strand = Plus / Minus Query: 51 acgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaat 110 |||||| ||||||||||||| | |||| ||| |||||||||||| | ||||| || | Sbjct: 549 acgaccatggccatagaaataaggcacgagagtgcatgattaggccccgacagatggatt 490 Query: 111 gactgcaccatcattacagaaacgggcncatgcgttgctgcanagtcccatgtcgaattt 170 ||| ||||| | |||||||||||| | ||||||||| |||| | | |||||||| || Sbjct: 489 gacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcatgtcgatgtt 430 Query: 171 catctcttggccacg 185 ||||||||||||||| Sbjct: 429 catctcttggccacg 415
>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and glucosyltransferase S Length = 10125 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tacagctgatggtatcaaga 28 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 aacagactgaatgactgcac 118 |||||||||||||||||||| Sbjct: 61583 aacagactgaatgactgcac 61602
>tpg|BK000650.1| TPA: TPA_exp: Mus musculus otopetrin 1 isoform a and isoform b (Otop1) gene, complete cds; alternatively spliced Length = 28272 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ttgtccacgttgtcacagac 212 |||||||||||||||||||| Sbjct: 14605 ttgtccacgttgtcacagac 14624
>gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone rp23-426e16, complete sequence Length = 194175 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ttgtccacgttgtcacagac 212 |||||||||||||||||||| Sbjct: 78067 ttgtccacgttgtcacagac 78086
>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete cds, and gtfK gene, 5' end Length = 4941 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tacagctgatggtatcaaga 28 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,252,329 Number of Sequences: 3902068 Number of extensions: 2252329 Number of successful extensions: 36227 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36204 Number of HSP's gapped (non-prelim): 22 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
