Clone Information

BLAST Search Result

Clone Name	rbags15g04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase ...	184	3e-46
2	MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subu...	120	3e-27
3	MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subu...	120	3e-27
4	MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subu...	119	6e-27
5	MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subu...	119	8e-27
6	MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subuni...	115	1e-25
7	MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subu...	110	4e-24
8	UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex co...	107	4e-23
9	UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex co...	105	9e-23
10	UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex co...	102	7e-22
11	MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subu...	92	1e-18
12	MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subu...	89	1e-17
13	MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase ...	85	2e-16
14	MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha sub...	71	2e-12
15	UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex co...	71	3e-12
16	MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subu...	70	7e-12
17	UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex co...	64	4e-10
18	MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha sub...	59	2e-08
19	YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III	57	6e-08
20	MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase ...	57	6e-08
21	Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4....	56	1e-07
22	MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha sub...	55	1e-07
23	MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha sub...	55	2e-07
24	MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subun...	55	2e-07
25	MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha sub...	55	2e-07
26	MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha sub...	54	3e-07
27	MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha sub...	54	5e-07
28	Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)	54	5e-07
29	Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)	51	3e-06
30	MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase...	50	4e-06
31	MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase...	46	1e-04
32	UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core...	44	4e-04
33	Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)	40	0.004
34	UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex co...	39	0.017
35	Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4....	37	0.038
36	Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (...	37	0.038
37	SPG21_XENLA (Q5FVD6) Maspardin (Spastic paraplegia 21 autosomal ...	30	4.6
38	YNS2_YEAST (P53877) Hypothetical 61.8 kDa Trp-Asp repeats-contai...	30	6.1
39	DJLA_HAEIN (P44607) DnaJ-like protein djlA	30	6.1
40	TR95_MOUSE (Q6PGF3) Thyroid hormone receptor-associated protein ...	30	6.1
41	SPG21_RAT (Q5XIC4) Maspardin (Spastic paraplegia 21 autosomal re...	30	7.9
42	OR10A_DROME (Q9VYZ1) Putative odorant receptor 10a	30	7.9
43	SPG21_PONPY (Q5RES2) Maspardin (Spastic paraplegia 21 autosomal ...	30	7.9
44	SPG21_MOUSE (Q9CQC8) Maspardin (Spastic paraplegia 21 autosomal ...	30	7.9
45	SPG21_HUMAN (Q9NZD8) Maspardin (Spastic paraplegia 21 autosomal ...	30	7.9
46	SPG21_BOVIN (Q8MJJ1) Maspardin (Spastic paraplegia 21 autosomal ...	30	7.9
47	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	30	7.9

>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 531

 Score =  184 bits (466), Expect = 3e-46
 Identities = 88/125 (70%), Positives = 109/125 (87%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           VYAVAK DCLDDL++AIM E++KL+YRV++ DV RARNQLKSS+ LH+DG++ + EDIGR
Sbjct: 407 VYAVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGR 466

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRT 279
           Q L YGRRIP  ELFARIDAVD ST++RVAN++I+D+DIAI+A+GPI+ LPDYN FRRRT
Sbjct: 467 QLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRT 526

Query: 278 YMLRY 264
           Y  RY
Sbjct: 527 YWNRY 531

to top

>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score =  120 bits (301), Expect = 3e-27
 Identities = 60/114 (52%), Positives = 79/114 (69%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +Y V +   + D+   +  E  +L   VTE +V RA+N LK+++ L LDGST + EDIGR
Sbjct: 365 LYMVCEQATVADMLHVVQNEWKRLCTDVTESEVARAKNLLKTNMLLQLDGSTPICEDIGR 424

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYN 297
           Q L Y RRIPIPEL ARIDAVD  T+RRV  ++I D+  AIAA+GPI+ LPD+N
Sbjct: 425 QMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSPAIAALGPIERLPDFN 478

to top

>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score =  120 bits (301), Expect = 3e-27
 Identities = 62/124 (50%), Positives = 82/124 (66%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +Y V +   + D+   + +E  +L   VTE +V RARN LK+++ L LDGST + EDIGR
Sbjct: 365 LYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGR 424

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRT 279
           Q L Y RRIPIPEL ARIDAV+  TIR V  ++I+++  AIAA+GPIK LPD+   R   
Sbjct: 425 QMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNM 484

Query: 278 YMLR 267
             LR
Sbjct: 485 CWLR 488

to top

>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 490

 Score =  119 bits (299), Expect = 6e-27
 Identities = 58/114 (50%), Positives = 80/114 (70%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +Y V +P  + D+   + +E  +L   VTE +V RA+N LK+++ L LDGST + EDIGR
Sbjct: 366 IYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNLLKTNMLLQLDGSTPICEDIGR 425

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYN 297
           Q L Y RRIPIPEL ARIDAV+   IR V  ++I+D+  A+AA+GPI+ LPD+N
Sbjct: 426 QMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSPAVAAVGPIEQLPDFN 479

to top

>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 489

 Score =  119 bits (298), Expect = 8e-27
 Identities = 59/113 (52%), Positives = 80/113 (70%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +Y V +P  + D+   + +E  +L   VTE +V RARN LK+++ L LDGST + EDIGR
Sbjct: 365 LYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGR 424

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
           Q L Y RRIPIPEL ARIDAV+  TIR V  ++I+++  AIAA+GPI+ LPD+
Sbjct: 425 QMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDF 477

to top

>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score =  115 bits (288), Expect = 1e-25
 Identities = 57/114 (50%), Positives = 79/114 (69%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +Y V +   + D+  A+ +E  +L   V+E +V RA+N LK+++ L LDGST + EDIGR
Sbjct: 365 LYMVCEQATVADMLHAVQKEWMRLCTAVSESEVARAKNLLKTNMLLQLDGSTPICEDIGR 424

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYN 297
           Q L Y RRIPIPEL ARIDAVD   +R V  ++I+ +  AIAA+GPI+ LPD+N
Sbjct: 425 QMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSPAIAALGPIERLPDFN 478

to top

>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (BeMPP1)
          Length = 465

 Score =  110 bits (275), Expect = 4e-24
 Identities = 57/118 (48%), Positives = 80/118 (67%)
 Frame = -2

Query: 617 DCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGR 438
           D LDDLA   ++E  +L+   +E +V  A+ QLK+S+ L LDG+T V E+IGRQ L YGR
Sbjct: 348 DNLDDLAHFTVREWMRLATAPSEGEVAIAKQQLKTSLLLALDGTTPVAEEIGRQMLAYGR 407

Query: 437 RIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
           R+   E+   +DAV    ++RVAN FI+D+D+AI A+GP++ LPDYN  R    +LRY
Sbjct: 408 RLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRIRSAMNLLRY 465

to top

>UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score =  107 bits (266), Expect = 4e-23
 Identities = 51/116 (43%), Positives = 75/116 (64%)
 Frame = -2

Query: 611 LDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRI 432
           +DD+ F +  +  +L    TE +V R +N L++++  HLDG+T V EDIGR  L YGRRI
Sbjct: 365 IDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRI 424

Query: 431 PIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
           P+ E  +RI  VD S +R + +++I+DQ  A+A  GPI+ LPDYN  R   + LR+
Sbjct: 425 PLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480

to top

>UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score =  105 bits (263), Expect = 9e-23
 Identities = 50/116 (43%), Positives = 74/116 (63%)
 Frame = -2

Query: 611 LDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRI 432
           +DD+ F +  +  +L    TE +V+R +N L++++  HLDG+T V EDIGR  L YGRRI
Sbjct: 365 IDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRI 424

Query: 431 PIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
           P+ E  +RI  VD   +R V +++ +DQ  A+A  GPI+ LPDYN  R   + LR+
Sbjct: 425 PLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480

to top

>UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score =  102 bits (255), Expect = 7e-22
 Identities = 49/116 (42%), Positives = 73/116 (62%)
 Frame = -2

Query: 611 LDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRI 432
           +DD+ F +  +  +L    TE +V R +N L++++  HLDG+T V EDIGR  L YGRRI
Sbjct: 365 IDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRI 424

Query: 431 PIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
           P+ E  +RI  VD   +R + +++ +DQ  A+A  GPI+ LPDYN  R   + LR+
Sbjct: 425 PLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480

to top

>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (Ubiquinol-cytochrome-c reductase complex core protein
           I) (EC 1.10.2.2)
          Length = 476

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
 Frame = -2

Query: 638 VYAVA-KPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           +Y V  K D +DDL    ++E ++L   V+E +V RA+ QLK+SI L LDG+TAV EDIG
Sbjct: 351 IYLVTDKLDRVDDLVHFSLREWTRLCSNVSEAEVERAKAQLKASILLSLDGTTAVAEDIG 410

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
           RQ +  GRR+   E+   IDAV    +   AN+ I+DQDIAI+A+G I+ L DY
Sbjct: 411 RQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDY 464

to top

>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 466

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 47/116 (40%), Positives = 72/116 (62%)
 Frame = -2

Query: 611 LDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRI 432
           LDD     ++E +++S   TE +V RA++QLK+ + L LDG+TAV EDIGRQ +  G+R+
Sbjct: 351 LDDTLHFTLKEWTRMSIAPTEGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRM 410

Query: 431 PIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
              ++   +DAV    I+RVA ++++D+D A+AA G I  L DY   R     + Y
Sbjct: 411 TPAQIENAVDAVSVDDIKRVAQKYLWDKDFALAAFGNIDGLKDYGRIRNDMSSMLY 466

to top

>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 457

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 48/116 (41%), Positives = 72/116 (62%)
 Frame = -2

Query: 611 LDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRI 432
           +DDL    +Q  ++L+   T  +V RA+ QL++S+ L LD +TA+ EDIGRQ L  GRR+
Sbjct: 343 IDDLVHFTLQNWARLTV-ATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRM 401

Query: 431 PIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
              E+  RI  +    + RVA+  I+D+DIA++A+G I+ L DYN  R    M R+
Sbjct: 402 SPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 457

to top

>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 482

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 37/101 (36%), Positives = 63/101 (62%)
 Frame = -2

Query: 626 AKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLI 447
           A P  ++ +A  +    +    R+TE++V RA+NQLKSS+ ++L+     +ED+GRQ L+
Sbjct: 339 AAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLM 398

Query: 446 YGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMG 324
           +GR+IP+ E+ ++I+ + P  I RVA   IF  ++  A  G
Sbjct: 399 HGRKIPVNEMISKIEDLKPDDISRVA-EMIFTGNVNNAGNG 438

to top

>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 494

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = -2

Query: 635 YAVAKPDCL-----DDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVE 471
           YA+A+P        +++    M+E+ ++S  ++EE+  RA+NQLK    L LDG+T + +
Sbjct: 348 YAIAEPGKSYGHEWENILHYAMRELIRVSRNISEEEFERAKNQLKLQTMLQLDGTTNIAD 407

Query: 470 DIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQ 348
           DIGRQ L +G R+P+   F ++DA+    + RV  R +  Q
Sbjct: 408 DIGRQVLSFGARVPLASFFEQLDAISREDLIRVGPRVLLRQ 448

to top

>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 462

 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 35/104 (33%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = -2

Query: 590 IMQEMSKL-SYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELF 414
           I++E  ++ S ++++ +V RA+ QLK+++ L LDGSTA+VEDIGRQ +  G+R+   E+F
Sbjct: 356 ILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVF 415

Query: 413 ARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRR 282
            ++D +    I   AN  + ++ +++ A+G   T+P+ ++   +
Sbjct: 416 EQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSYIEEK 459

to top

>UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 457

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
 Frame = -2

Query: 611 LDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSI-QLHLDGSTAVVED---IGRQQLIY 444
           +DDL    +++ ++L+  VT+ +V RA++ LK  + QL+  G+   V D   +G + LI 
Sbjct: 340 IDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNP--VNDANLLGAEVLIK 397

Query: 443 GRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 264
           G ++ + E F +IDA+    ++  A + ++DQDIAIA  G I+ L DY   R    M+R+
Sbjct: 398 GSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 457

to top

>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 577

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 27/65 (41%), Positives = 45/65 (69%)
 Frame = -2

Query: 551 EEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRV 372
           E +V RA+NQL+SS+ ++L+     +ED+GRQ  ++GR+IP+ E+  RI+ +    +RRV
Sbjct: 465 ELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRV 524

Query: 371 ANRFI 357
           A R +
Sbjct: 525 AKRVV 529

to top

>YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III|
          Length = 471

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
 Frame = -2

Query: 638 VYAVAKPDCLDD---LAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVED 468
           +Y VA    L+D   +  ++  E   L+   TEE+V  A+NQ ++++  +L+ +T     
Sbjct: 344 IYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGF 403

Query: 467 IGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
             ++ L  G    + EL A+I  VD   +R   +R ++D+D+A   +G  +  P+Y
Sbjct: 404 NAKELLYTGNLRQLSELEAQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNY 459

to top

>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 494

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
 Frame = -2

Query: 611 LDDLAFA----IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQ-QLI 447
           LDD A      I++E+      VT E+  RA+NQLKSS+ ++L+     +ED+GRQ Q  
Sbjct: 366 LDDAAHLAAPLIIRELCNTVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQ 425

Query: 446 YGRRIPIPELFARIDAVDPSTIRRVANRFI 357
            G  I   E+  +IDA+ PS + RVA R +
Sbjct: 426 NGLYITPKEMIEKIDALTPSDLSRVARRVL 455

to top

>Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4.99.-)|
          Length = 459

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 31/109 (28%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLS-YRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           VYA  +P  + D+      E+  ++ + +T++++ RA  QL+ S  L L+ + A++  IG
Sbjct: 340 VYAGCRPSQVHDVLKICRDELDHVAEHGLTDDEIGRAVGQLQGSTVLGLEDTGALMNRIG 399

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIK 315
           + +L +G ++ + ++ ARI +V P  +R VA R +  +  +++ +GP+K
Sbjct: 400 KSELCWGEQMSVDDMLARIASVTPDDVRAVA-RDVLGRRPSLSVIGPLK 447

to top

>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 474

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 35/112 (31%), Positives = 54/112 (48%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           + A   P     L   +  E   ++  +++E+V RA+NQLKSS+ ++L+     VEDIGR
Sbjct: 334 ISASCVPSFNPHLCNVLAGEFVHMARNLSDEEVARAKNQLKSSLLMNLESQVITVEDIGR 393

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPD 303
           Q L   +R+   EL   I AV    + RVA   +      +A    +  L D
Sbjct: 394 QVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGEDLTKLTD 445

to top

>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 525

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 60/113 (53%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           ++A A P  + ++   I +E   +S  V   ++ RA+ QL S + ++L+    + ED+GR
Sbjct: 392 IHASADPRQVREMVEIITKEFILMSGTVDAVELERAKTQLTSMLMMNLESRPVIFEDVGR 451

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
           Q L    R    EL   I  V P  ++RVA++ +  +  A+AA+G +  LP Y
Sbjct: 452 QVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKP-AVAALGDLTDLPTY 503

to top

>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           ++A A P  + ++   I +E   +   V   ++ RA+ QL S + ++L+    + ED+GR
Sbjct: 391 IHASADPRQVREMVEIITKEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGR 450

Query: 458 QQL-IYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
           Q L  + R++P  EL   I  V P  I+RVA++ +  +  A+AA+G +  LP Y
Sbjct: 451 QVLATHSRKLP-HELCTLIRNVKPEDIKRVASKMLRGKP-AVAALGDLTDLPTY 502

to top

>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           ++A A P  + ++   I +E   +   V   ++ RA+ QL S + ++L+    + ED+GR
Sbjct: 391 IHASADPRQVREMVEIITKEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGR 450

Query: 458 QQL-IYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
           Q L  + R++P  EL   I  V P  I+RVA++ +  +  A+AA+G +  LP Y
Sbjct: 451 QVLATHSRKLP-HELCTLIRNVKPEDIKRVASKMLRGKP-AVAALGDLTDLPTY 502

to top

>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (Ubiquinol-cytochrome-c reductase subunit II) (EC
           1.10.2.2)
          Length = 504

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 30/87 (34%), Positives = 45/87 (51%)
 Frame = -2

Query: 557 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 378
           V +  + RA+   KS+I ++L+      EDIGRQ L YG R P+      IDAV    I 
Sbjct: 410 VDQVQLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIA 469

Query: 377 RVANRFIFDQDIAIAAMGPIKTLPDYN 297
            V  + I    + +A+ G + +LP Y+
Sbjct: 470 SVVQKLI-SSPLTMASYGDVLSLPSYD 495

to top

>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 525

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 34/113 (30%), Positives = 59/113 (52%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           ++A A P  + ++   I +E   +   V   ++ RA+ QL S + ++L+    + ED+GR
Sbjct: 392 IHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGR 451

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 300
           Q L    R    EL   I  V P  ++RVA++ +  +  A+AA+G +  LP Y
Sbjct: 452 QVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKP-AVAALGDLTDLPTY 503

to top

>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)|
          Length = 412

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 32/106 (30%), Positives = 59/106 (55%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +YA    D L+ L   I  E+ K++ +V+ E+++RA+ QL+S++Q+  + +T   E+IG+
Sbjct: 302 IYASTAHDKLELLYKEIKNEIIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGK 361

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGP 321
              ++G+ I   E+   I ++    I   AN+ IF      A +GP
Sbjct: 362 NYSVFGQYISPEEIMEIIMSIKADDIINTANK-IFSGTTTSAIIGP 406

to top

>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)|
          Length = 412

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 32/106 (30%), Positives = 58/106 (54%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGR 459
           +YA    + L+ L   I  E+ K++  V+ E++IRA+ QL+S++Q+  + +T   E+IG+
Sbjct: 302 IYASTAHNKLELLYREIKNEIIKITETVSTEEIIRAKMQLRSNLQMAQEQNTYKSEEIGK 361

Query: 458 QQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGP 321
              ++G+ I   E+   I  +    I   AN+ IF     +A +GP
Sbjct: 362 NYSVFGKYILPEEIIEIITNIRADDIINTANK-IFSGTTTLAIIGP 406

to top

>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit|
           2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2)
          Length = 499

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSY-RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           +Y    P+        +  EM+ ++  +V ++ + RA+   KS+I ++L+      EDIG
Sbjct: 379 IYGCTSPEFASQGIELVASEMNAVADGKVNQKHLDRAKAATKSAILMNLESRMIAAEDIG 438

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRR 282
           RQ L YG R P+ +    +D +    I    ++ +  + + +A  G +  +P Y+   +R
Sbjct: 439 RQILTYGERKPVDQFLKTVDQLTLKDIADFTSK-VITKPLTMATFGDVLNVPSYDSVSKR 497

to top

>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit|
           1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1)
          Length = 503

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = -2

Query: 560 RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTI 381
           +V +  + RA+   KS++ ++L+      EDIGRQ L YG R P+ +    + +VD  T+
Sbjct: 410 KVNQAHLDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQF---LKSVDQLTL 466

Query: 380 RRVAN--RFIFDQDIAIAAMGPIKTLPDYN 297
           + +A+    +  + + + + G +  +P Y+
Sbjct: 467 KDIADFTSKVISKPLTMGSFGDVLAVPSYD 496

to top

>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 452

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSY-RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           +Y V++     D+  A   ++  ++   ++  DV  A+N+LK+   + ++ S   + +IG
Sbjct: 337 IYTVSQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIG 396

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 357
            Q L  G  +P P +  +IDAV  + + + A +F+
Sbjct: 397 SQALATGSYMPPPTVLQQIDAVADADVVKAAKKFV 431

to top

>Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)|
          Length = 445

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYR-VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           VYA   P    D+   I + ++ ++   +TE +   A+  L+  I L L+ S + +  +G
Sbjct: 324 VYAACLPGRFADVMQVISEVLASVAGDGITEAECRIAKGSLRGGIILGLEDSNSWMSRLG 383

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPI---KTLP 306
           R +L YG+   I     +ID V    +  +A++ + ++    A +GP    KTLP
Sbjct: 384 RSELNYGKYRGIEHTLQQIDEVTVEQVNALAHQ-LLNKRYGAAVLGPYASKKTLP 437

to top

>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 24/112 (21%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSY-RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           +Y +++     ++  A   ++  ++   ++  DV  A+N+LK+   + ++ S   + +IG
Sbjct: 338 IYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIG 397

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLP 306
            Q L  G  +P   +  +ID+V  + + + A +F+  +  ++AA G +   P
Sbjct: 398 SQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKK-SMAASGNLGHTP 448

to top

>Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4.99.-)|
          Length = 438

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYR-VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           VYA   P+   D+       +  ++   +TE +   A+  L+  + L L+ S++ +  +G
Sbjct: 317 VYAACLPERFADVMRVTADVLESVARDGITEAECGIAKGSLRGGLVLGLEDSSSRMSRLG 376

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGP 321
           R +L YG+   I     +I+ V    +  VA R +  +    A +GP
Sbjct: 377 RSELNYGKHRSIEHTLRQIEQVTVEEVNAVA-RHLLSRRYGAAVLGP 422

to top

>Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (EC 3.4.99.-)|
          Length = 438

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = -2

Query: 638 VYAVAKPDCLDDLAFAIMQEMSKLSYR-VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIG 462
           VYA   P+   D+       +  ++   +TE +   A+  L+  + L L+ S++ +  +G
Sbjct: 317 VYAACLPERFADVMRVTADVLESVARDGITEAECGIAKGSLRGGLVLGLEDSSSRMSRLG 376

Query: 461 RQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIFDQDIAIAAMGP 321
           R +L YG+   I     +I+ V    +  VA R +  +    A +GP
Sbjct: 377 RSELNYGKHRSIEHTLRQIEQVTVEEVNAVA-RHLLSRRYGAAVLGP 422

to top

>SPG21_XENLA (Q5FVD6) Maspardin (Spastic paraplegia 21 autosomal recessive Mast|
           syndrome protein homolog)
          Length = 310

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 329 MGPIKTLPDYNWFRRRTYMLRY*IQPAVYHVYSL 228
           MG IK  PDYNWFR    + R  +      V+SL
Sbjct: 1   MGAIKISPDYNWFRSTVPLKRIIVDDDDSKVWSL 34

to top

>YNS2_YEAST (P53877) Hypothetical 61.8 kDa Trp-Asp repeats-containing protein|
           in NPR1-RPS3 intergenic region
          Length = 555

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
 Frame = +3

Query: 351 VKDEAVCNTPDSAGINCIYSRK--KLGNRNST------------AIDELLTSNILNNSSG 488
           +K  A+ N   SAG+N +   +   L  RNS             A+ +L+  N+LN++  
Sbjct: 289 LKGNAIVNLLQSAGVNTVQKGRVFSLVQRNSLTGGENEDLDALYAMGQLVCENVLNSNVS 348

Query: 489 AIKV*LDGRFQLI 527
            +++ +DG   LI
Sbjct: 349 CLEISMDGTLLLI 361

to top

>DJLA_HAEIN (P44607) DnaJ-like protein djlA|
          Length = 288

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -2

Query: 623 KPDCLDDLAFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLD 492
           + D     +FA++  +SK   RVTEED I+  NQL   IQL LD
Sbjct: 53  RQDLFMQTSFAVLGHLSKSKGRVTEED-IQLANQL--MIQLKLD 93

to top

>TR95_MOUSE (Q6PGF3) Thyroid hormone receptor-associated protein complex 95 kDa|
           component (Trap95) (Thyroid hormone receptor-associated
           protein 5) (Vitamin D3 receptor-interacting protein
           complex component DRIP92)
          Length = 828

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 164 YVPKWRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSI 18
           YV +W  +    + CP LP A   SC+   A +TD+  DD +L+    I
Sbjct: 5   YVCEWEKWAKSTY-CPSLPLACAWSCRNLTAFTTDLRNDDQDLTHMIHI 52

to top

>SPG21_RAT (Q5XIC4) Maspardin (Spastic paraplegia 21 autosomal recessive Mast|
           syndrome protein homolog)
          Length = 261

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 329 MGPIKTLPDYNWFR 288
           MG IK  PDYNWFR
Sbjct: 1   MGEIKVSPDYNWFR 14

to top

>OR10A_DROME (Q9VYZ1) Putative odorant receptor 10a|
          Length = 406

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = +2

Query: 191 YTDAKTSNHLAFADCKHGTLLVESSNGACRSCV*TSCSLEES*LVPWQRWQYPGQR 358
           YT A  S  L +  C  GTL+ ESS G CR+    SC        PWQ ++ P QR
Sbjct: 318 YTVAALSQLLVY--CYGGTLVAESSTGLCRAMF--SC--------PWQLFK-PKQR 360

to top

>SPG21_PONPY (Q5RES2) Maspardin (Spastic paraplegia 21 autosomal recessive Mast|
           syndrome protein homolog)
          Length = 308

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 329 MGPIKTLPDYNWFR 288
           MG IK  PDYNWFR
Sbjct: 1   MGEIKVSPDYNWFR 14

to top

>SPG21_MOUSE (Q9CQC8) Maspardin (Spastic paraplegia 21 autosomal recessive Mast|
           syndrome protein homolog) (Acid cluster protein 33)
          Length = 308

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 329 MGPIKTLPDYNWFR 288
           MG IK  PDYNWFR
Sbjct: 1   MGEIKVSPDYNWFR 14

to top

>SPG21_HUMAN (Q9NZD8) Maspardin (Spastic paraplegia 21 autosomal recessive Mast|
           syndrome protein) (Acid cluster protein 33)
          Length = 308

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 329 MGPIKTLPDYNWFR 288
           MG IK  PDYNWFR
Sbjct: 1   MGEIKVSPDYNWFR 14

to top

>SPG21_BOVIN (Q8MJJ1) Maspardin (Spastic paraplegia 21 autosomal recessive Mast|
           syndrome protein homolog)
          Length = 308

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 329 MGPIKTLPDYNWFR 288
           MG IK  PDYNWFR
Sbjct: 1   MGEIKVSPDYNWFR 14

to top

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +3

Query: 150 PLRHIICAWMWPYNILMPKQAIILPLQTVNMVHCWLNLVTEHVGPASEPVVVWKSLNWSH 329
           PL H+I A+  P NI +       P Q         + V EH  P+SEPV+  + L  S 
Sbjct: 15  PLSHLINAFHSPKNISVSVNTSASPKQH-------RDTVAEHEAPSSEPVLNLRDLGLSE 67

Query: 330 GSDGNI 347
              G I
Sbjct: 68  LKIGQI 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,292,714
Number of Sequences: 219361
Number of extensions: 2069937
Number of successful extensions: 5422
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5416
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result