>V2A_TAV (P29035) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 828

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 27/87 (31%), Positives = 41/87 (47%)
 Frame = -1

Query: 264 RPPPASAAFHNKHICVSSVSARSEELYQIFLYCLSQ*AYIWFLVLFYVGCGFLLLSIVYF 85
           RP PA+  FH K +  S  S     L+Q F  CL++       V+  VG     L I  F
Sbjct: 459 RPLPATITFHRKQL-TSQFSPLFTALFQRFQRCLTK------RVILPVG-KISSLEIKDF 510

Query: 84  TAFS*AISGLDISRYFK*MGRMHLSMQ 4
           +  +     +D+S++ K  G +HL +Q
Sbjct: 511 SVLNKFCLEIDLSKFDKSQGELHLMIQ 537

>V2A_CMVQ (P06012) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 839

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 26/87 (29%), Positives = 39/87 (44%)
 Frame = -1

Query: 264 RPPPASAAFHNKHICVSSVSARSEELYQIFLYCLSQ*AYIWFLVLFYVGCGFLLLSIVYF 85
           RP PA+  FH K I  S  S     L++ F  CL +       V+  VG     L +  F
Sbjct: 452 RPVPATITFHKKTI-TSQFSPLFISLFERFQRCLRE------RVVLPVG-KISSLEMTGF 503

Query: 84  TAFS*AISGLDISRYFK*MGRMHLSMQ 4
           +  +     +D+S++ K  G  HL +Q
Sbjct: 504 SVLNKHCLEIDLSKFDKSQGEFHLMIQ 530


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,473,331
Number of Sequences: 219361
Number of extensions: 1123667
Number of successful extensions: 2895
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2894
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)