>IF2_NITWN (Q3SWP9) Translation initiation factor IF-2|
          Length = 871

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 63  DDGYFPITNWNTSEMLAHGKTETVSKIIAGKVIREPQCK-ERNHVQVQVHDQAADSL*GE 239
           DDG  P     T E + H K   V  IIA   I +P+ K ER   ++  H+   +S+ G+
Sbjct: 452 DDGVMP----QTIEAINHAKAAKVPMIIAINKIDKPEAKPERVRTELLQHEVQVESMGGQ 507

>UL52_HCMVA (P16793) Probable major envelope glycoprotein UL52 (HFRF1 protein)|
          Length = 668

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 149 CYDLRNRFCFSMSKHFRCIPVCNGEITIINKS 54
           C+ LR      + KHF C P C G I + N++
Sbjct: 553 CHVLRQAGVTGIYKHFFCDPQCAGNIRVTNEA 584

>RTXC_VIBCH (Q9X4W3) Cytolysin-activating lysine-acyltransferase rtxC (EC|
           2.3.1.-)
          Length = 153

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 176 ALWLXNHFPCYDLRNRFCFSMSKHFRCIPVCN 81
           A WL    P ++L N+FC+   +H R I  CN
Sbjct: 38  AEWLQRILPAFEL-NQFCYYEDEHGRPIAFCN 68

>PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)|
          Length = 607

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
 Frame = +3

Query: 90  WNTSEMLAHGKTETVSKIIAGKVIREPQCKERNHVQVQVHDQAADSL*GEETGCRPTHGG 269
           W  +   AH   +   +I+    I +    E    ++       +S+ GEE G RPT G 
Sbjct: 69  WTANTPRAHITNQRTMEILRDAGIEDQVLAEAVPHELMGDTVYCESMAGEEIGRRPTWGT 128

Query: 270 HP--VASY---PPGMPC 305
            P   A Y    P MPC
Sbjct: 129 RPDRRADYELASPAMPC 145

>NPRM_BACME (Q00891) Bacillolysin precursor (EC 3.4.24.28) (Neutral protease)|
          Length = 562

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = +3

Query: 72  YFPITNWNTSEMLAHGKTETVSKIIAGKVIREPQCKERNHVQVQVHDQAADSL*GEETGC 251
           Y  I  W +++ LAH   +   K+++G V  +   KE+   Q QV  + A     ++ G 
Sbjct: 110 YNNIPVWGSTQ-LAHVAKDGTLKVVSGTVAPDLDKKEKLKGQKQVDSKKAIQAAEKDLGF 168

Query: 252 RPTHGGHP 275
           +PT+   P
Sbjct: 169 KPTYEKSP 176

>TSC1_RAT (Q9Z136) Hamartin (Tuberous sclerosis 1 protein homolog)|
          Length = 1163

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 234 GEETGCRPTHGGHPVASYPPGMPCRSHQC 320
           G  TG + T  G P  S PP  PC    C
Sbjct: 378 GTTTGGKGTPSGTPATSPPPAPPCPQDDC 406

>LSHB_MACFA (Q6EV78) Lutropin beta chain precursor (Luteinizing hormone beta|
           subunit) (LSH-beta) (LSH-B) (LH-B)
          Length = 141

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = +3

Query: 93  NTSEMLAHGKTETVSKIIAGKVIREPQCKERNHVQVQVHDQAADSL*GEETGCRPTHGGH 272
           NTS  +  G   T+ +++   ++  PQ      V    H+   DS+  +  GC P  G  
Sbjct: 50  NTS--ICAGYCPTMMRVLQAALLPLPQ------VVCTYHEVRFDSI--QLPGCLP--GVD 97

Query: 273 PVASYPPGMPCRSHQC 320
           PV S+P  + CR   C
Sbjct: 98  PVVSFPVALSCRCGPC 113

>YCLC_BACSU (P94405) Hypothetical protein yclC|
          Length = 473

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 294 LEDMKQLGALHE*VGIQSLLPKGCQQLGHEPEPEHDYVL 178
           LED    G  +  VGI  +  KG  +LG +P P+HD  +
Sbjct: 150 LEDPDNFGKQN--VGIYRMQVKGKDRLGIQPVPQHDIAI 186

>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated|
           scaffold protein (GRP1-associated scaffold protein)
           (Tamalin) (95 kDa postsynaptic density protein
           discs-large ZO-1 domain-containing protein) (PSD-95 PDZ
           domain-containing protein)
          Length = 394

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 159 IREPQCKERNHVQVQVHDQAADSL*GEETGCRPTHGGHPVASYPPGMP 302
           +R+ Q KE       +  +A DS   E     PT  G P A+ PPG P
Sbjct: 6   LRKLQQKEEATAAPDLAGRAPDS---EAARAAPTPSGPPAAAAPPGAP 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,448,748
Number of Sequences: 219361
Number of extensions: 864491
Number of successful extensions: 2039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)