ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
2gb|AY105327.1| Zea mays PCO147247 mRNA sequence 161 4e-36
3dbj|AK059556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 9e-34
4gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, comple... 147 5e-32
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
7emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa... 131 3e-27
8ref|NM_118819.2| Arabidopsis thaliana VTC2 (VITAMIN C DEFECTIVE ... 58 4e-05
9gb|AY056134.1| Arabidopsis thaliana unknown protein (At4g26850) ... 58 4e-05
10gb|AY093138.1| Arabidopsis thaliana putative protein (At4g26850)... 58 4e-05
11gb|BT006589.1| Arabidopsis thaliana At4g26850 mRNA, complete cds 58 4e-05
12ref|XM_417003.1| PREDICTED: Gallus gallus similar to highwire; P... 54 6e-04
13emb|CR353672.1| Gallus gallus finished cDNA, clone ChEST231o13 54 6e-04
14ref|NM_124894.4| Arabidopsis thaliana unknown protein AT5G55120 ... 50 0.010
15gb|AY091285.1| Arabidopsis thaliana unknown protein (At5g55120) ... 50 0.010
16gb|AY063788.1| Arabidopsis thaliana unknown protein (At5g55120) ... 50 0.010
17emb|BX831350.1|CNS0A1O4 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
18emb|BX829969.1|CNS0A043 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
19emb|BX831865.1|CNS09ZT1 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
20emb|BX831807.1|CNS09ZUD Arabidopsis thaliana Full-length cDNA Co... 50 0.010
21emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, ... 48 0.038
22emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 48 0.038
23emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, B... 48 0.038
24gb|AF508793.1| Arabidopsis thaliana VTC2 (VTC2) gene, complete cds 48 0.038
25ref|NM_015057.2| Homo sapiens MYC binding protein 2 (MYCBP2), mRNA 46 0.15
26emb|AL159158.12| Human DNA sequence from clone RP11-81G4 on chro... 46 0.15
27gb|AF075587.1|AF075587 Homo sapiens protein associated with Myc ... 46 0.15
28gb|AY579201.1| Tetrahymena thermophila DNA topoisomerase type 2 ... 44 0.59
29ref|XM_809076.1| Trypanosoma cruzi strain CL Brener 69 kDa paraf... 44 0.59
30ref|XM_797553.1| Trypanosoma cruzi strain CL Brener paraxonemal ... 44 0.59
31ref|XM_802852.1| Trypanosoma cruzi strain CL Brener 69 kDa paraf... 44 0.59
32gb|M97548.1|TRBPAR2A Trypanosoma cruzi major paraflagellar rod p... 44 0.59
33gb|BT016612.1| Zea mays clone Contig445 mRNA sequence 42 2.3
34gb|BT018863.1| Zea mays clone EL01N0560H03.d mRNA sequence 42 2.3
35gb|BT013858.1| Lycopersicon esculentum clone 132824R, mRNA sequence 42 2.3
36gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
37emb|Z49131.1|CEZC373 Caenorhabditis elegans Cosmid ZC373, comple... 42 2.3
38emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2... 42 2.3
39gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence 42 2.3
40gb|AC139354.5| Medicago truncatula clone mth1-64n13, complete se... 42 2.3
41gb|AC019205.4| Homo sapiens BAC clone RP11-398K22 from 6, comple... 42 2.3
42ref|NM_077291.2| Caenorhabditis elegans COLlagen family member (... 42 2.3
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
45dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
46emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Co... 42 2.3
47dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
48dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
49dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
50gb|U91900.1|DBU91900 Dunaliella bardawil phytoene synthase mRNA,... 42 2.3
51gb|AY833719.1| Canis familiaris TERT gene, promoter region and p... 40 9.2
52gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, com... 40 9.2
53gb|AC131083.8| Mus musculus chromosome 1, clone RP23-444L13, com... 40 9.2
54gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.2
55ref|NM_001031001.1| Gallus gallus serpin peptidase inhibitor, cl... 40 9.2
56gb|AY563633.1| Canis familiaris telomerase reverse transcriptase... 40 9.2
57gb|DQ465931.1| Fusarium oxysporum isolate SAT75 translation elon... 40 9.2
58gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, comple... 40 9.2
59gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, compl... 40 9.2
60emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 9.2
61emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chro... 40 9.2
62gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Can... 40 9.2
63gb|J00922.1|CHKY Gallus gallus ovalbumin (oval-Y) gene, complete... 40 9.2
64dbj|AK081916.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 9.2
65dbj|AK079664.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 9.2
66dbj|AK015917.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.2
67gb|AC084759.2|AC084759 Homo sapiens chromosome 15 clone RP11-643... 40 9.2
68gb|AC105383.3| Homo sapiens BAC clone RP11-9G1 from 4, complete ... 40 9.2
69gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 40 9.2
70gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, comp... 40 9.2
71ref|NM_173745.4| Mus musculus dual specificity phosphatase 18 (D... 40 9.2
72gb|AC164661.3| Pan troglodytes BAC clone CH251-11F8 from chromos... 40 9.2
73gb|BC079285.1| Rattus norvegicus dual specificity phosphatase 18... 40 9.2
74gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome... 40 9.2
75ref|NM_001013128.1| Rattus norvegicus dual specificity phosphata... 40 9.2
76gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromoso... 40 9.2
77gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromos... 40 9.2
78gb|BC020036.1| Mus musculus dual specificity phosphatase 18, mRN... 40 9.2 
>dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M14, full
            insert sequence
          Length = 2088

 Score =  161 bits (81), Expect = 4e-36
 Identities = 250/305 (81%), Gaps = 1/305 (0%)
 Strand = Plus / Minus

                                                                        
Query: 366  aagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaagc 425
            |||||| | |||||||| ||||| || || ||||| ||||| || ||||| ||||| || 
Sbjct: 1631 aagatgtaggccttcacttcctcgaagcgttcctccgacagggaaacctcagcgaggagt 1572

                                                                        
Query: 426  ctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtgt 485
            ||||| || || |||||||| ||||||||| | ||  |||| |||||||| || ||||| 
Sbjct: 1571 ctccacgcagaagcttctgatgcctcctcgtaatcactccttcgtttcagcacgatgtgg 1512

                                                                        
Query: 486  ccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcacttc 545
            |||||||||||||| || || ||||| ||| ||||||||||| || ||||||||||||||
Sbjct: 1511 ccactgatctcccacacagctgggttaacc-tgcgtgtccagtagctcctggctcacttc 1453

                                                                        
Query: 546  accaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatc 605
             || |||||||| ||||| |||||||||||||| || | ||||||| || | ||  | ||
Sbjct: 1452 tcccagagcctgcttctcggcatagcactgagggaagaggaagatctttttgccgcagtc 1393

                                                                        
Query: 606  agagatgaggacgttgaaaggaacattgttctcctggagccaaatgcaagcgttggtaac 665
            |||||| || || ||| |||| |||||||| ||||| ||||| || |||||| ||| |||
Sbjct: 1392 agagataagaacattgtaaggcacattgttgtcctgcagccagatacaagcgctggaaac 1333

                 
Query: 666  cacat 670
            |||||
Sbjct: 1332 cacat 1328
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>gb|AY105327.1| Zea mays PCO147247 mRNA sequence
          Length = 1954

 Score =  161 bits (81), Expect = 4e-36
 Identities = 250/305 (81%), Gaps = 1/305 (0%)
 Strand = Plus / Minus

                                                                        
Query: 365  gaagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaag 424
            ||||||| | |||||||| ||||| || |||||||| || ||||| ||||| ||||| ||
Sbjct: 1593 gaagatgtacgccttcacttcctcgaagcgctcctcggagagagagacctcggcgaggag 1534

                                                                        
Query: 425  cctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtg 484
              |||| || || | ||| || ||||||||  ||||| ||||||||||||| || |||||
Sbjct: 1533 tttccacgcggaggtttcagatgcctcctcatagtccatcctccgtttcagcaccatgtg 1474

                                                                        
Query: 485  tccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcactt 544
            ||||||||||||||| || || ||||||| |||| ||||||||||| |||||||||||||
Sbjct: 1473 tccactgatctcccacacagctgggttca-cctgagtgtccagcagctcctggctcactt 1415

                                                                        
Query: 545  caccaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaat 604
            |||| |||||||| ||||| || |||||||| || || | ||| | |||  | ||| | |
Sbjct: 1414 cacccagagcctgcttctctgcgtagcactgggggaacaggaaaaccctcttgccacagt 1355

                                                                        
Query: 605  cagagatgaggacgttgaaaggaacattgttctcctggagccaaatgcaagcgttggtaa 664
            |||| ||||| || ||| |||| |||||||| || || |||||||||||||| || | ||
Sbjct: 1354 cagaaatgagcacattgtaaggcacattgttgtcttgcagccaaatgcaagcattagaaa 1295

                 
Query: 665  ccaca 669
            |||||
Sbjct: 1294 ccaca 1290
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>dbj|AK059556.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G08, full
           insert sequence
          Length = 1295

 Score =  153 bits (77), Expect = 9e-34
 Identities = 249/305 (81%), Gaps = 1/305 (0%)
 Strand = Plus / Minus

                                                                       
Query: 366 aagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaagc 425
           |||||| | |||||||| ||||| || || ||||| ||||| || ||||| ||||| || 
Sbjct: 873 aagatgtaggccttcacttcctcgaagcgttcctccgacagggaaacctcagcgaggagt 814

                                                                       
Query: 426 ctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtgt 485
           ||||| || || |||||||| ||||||||| | ||  |||| |||||||| || ||||| 
Sbjct: 813 ctccacgcagaagcttctgatgcctcctcgtaatcactccttcgtttcagcacgatgtgg 754

                                                                       
Query: 486 ccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcacttc 545
           |||||||||||||| || || ||||| | ||||||||||||| || ||||||| ||||||
Sbjct: 753 ccactgatctcccacacagctgggtt-aacctgcgtgtccagtagctcctggcccacttc 695

                                                                       
Query: 546 accaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatc 605
            || |||||||| ||||| |||||||||||||| || | ||||||| || | ||  | ||
Sbjct: 694 tcccagagcctgcttctcggcatagcactgagggaagaggaagatctttttgccgcagtc 635

                                                                       
Query: 606 agagatgaggacgttgaaaggaacattgttctcctggagccaaatgcaagcgttggtaac 665
           |||||| || || ||| |||| |||||||| ||||| ||||| || |||||| ||| |||
Sbjct: 634 agagataagaacattgtaaggcacattgttgtcctgcagccagatacaagcgctggaaac 575

                
Query: 666 cacat 670
           |||||
Sbjct: 574 cacat 570
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>gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence
          Length = 1732

 Score =  147 bits (74), Expect = 5e-32
 Identities = 249/306 (81%), Gaps = 1/306 (0%)
 Strand = Plus / Minus

                                                                        
Query: 365  gaagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaag 424
            ||||||| | |||||||| ||||| || |||||||| || || || ||||| || || ||
Sbjct: 1335 gaagatgtacgccttcacttcctcgaagcgctcctcagagagggagacctcagcaaggag 1276

                                                                        
Query: 425  cctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtg 484
            | |||| || || | ||| || ||||||||  ||||  ||||||| ||||| || |||||
Sbjct: 1275 cttccacgcggaggtttcagatgcctcctcatagtcgttcctccgcttcagcacgatgtg 1216

                                                                        
Query: 485  tccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcactt 544
             |||||||||||||| || || ||||||||| || ||||||||||| |||||||||||||
Sbjct: 1215 gccactgatctcccacacagctgggttcacc-tgagtgtccagcagctcctggctcactt 1157

                                                                        
Query: 545  caccaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaat 604
            |||| |||||||| ||||| ||||| ||||| || || | ||||| |||  | ||| | |
Sbjct: 1156 cacccagagcctgcttctctgcataacactgggggaacaggaagaccctcttgccacagt 1097

                                                                        
Query: 605  cagagatgaggacgttgaaaggaacattgttctcctggagccaaatgcaagcgttggtaa 664
            |||| ||||| || ||| |||| |||||||| || || |||||||||||||| |||| ||
Sbjct: 1096 cagaaatgagcacattgtaaggcacattgttgtcttgcagccaaatgcaagcattggaaa 1037

                  
Query: 665  ccacat 670
            ||||||
Sbjct: 1036 ccacat 1031
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  131 bits (66), Expect = 3e-27
 Identities = 175/210 (83%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                           
Query: 366     aagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaagc 425
               |||||| | |||||||| ||||| || || ||||| ||||| || ||||| ||||| || 
Sbjct: 4532519 aagatgtaggccttcacttcctcgaagcgttcctccgacagggaaacctcagcgaggagt 4532578

                                                                           
Query: 426     ctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtgt 485
               ||||| || || |||||||| ||||||||| | ||  |||| |||||||| || ||||| 
Sbjct: 4532579 ctccacgcagaagcttctgatgcctcctcgtaatcactccttcgtttcagcacgatgtgg 4532638

                                                                           
Query: 486     ccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcacttc 545
               |||||||||||||| || || ||||| | ||||||||||||| || ||||||||||||||
Sbjct: 4532639 ccactgatctcccacacagctgggtt-aacctgcgtgtccagtagctcctggctcacttc 4532697

                                             
Query: 546     accaagagcctgtttctcagcatagcactg 575
                || |||||||| ||||| |||||||||||
Sbjct: 4532698 tcccagagcctgcttctcggcatagcactg 4532727
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  131 bits (66), Expect = 3e-27
 Identities = 175/210 (83%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                           
Query: 366     aagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaagc 425
               |||||| | |||||||| ||||| || || ||||| ||||| || ||||| ||||| || 
Sbjct: 4532500 aagatgtaggccttcacttcctcgaagcgttcctccgacagggaaacctcagcgaggagt 4532559

                                                                           
Query: 426     ctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtgt 485
               ||||| || || |||||||| ||||||||| | ||  |||| |||||||| || ||||| 
Sbjct: 4532560 ctccacgcagaagcttctgatgcctcctcgtaatcactccttcgtttcagcacgatgtgg 4532619

                                                                           
Query: 486     ccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcacttc 545
               |||||||||||||| || || ||||| | ||||||||||||| || ||||||||||||||
Sbjct: 4532620 ccactgatctcccacacagctgggtt-aacctgcgtgtccagtagctcctggctcacttc 4532678

                                             
Query: 546     accaagagcctgtttctcagcatagcactg 575
                || |||||||| ||||| |||||||||||
Sbjct: 4532679 tcccagagcctgcttctcggcatagcactg 4532708
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>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129155

 Score =  131 bits (66), Expect = 3e-27
 Identities = 175/210 (83%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                         
Query: 366   aagatgcatgccttcacctcctcaaatcgctcctctgacagagacacctctgcgagaagc 425
             |||||| | |||||||| ||||| || || ||||| ||||| || ||||| ||||| || 
Sbjct: 72259 aagatgtaggccttcacttcctcgaagcgttcctccgacagggaaacctcagcgaggagt 72200

                                                                         
Query: 426   ctccaggccgatgcttctgaagcctcctcgaagtccgtcctccgtttcagaacaatgtgt 485
             ||||| || || |||||||| ||||||||| | ||  |||| |||||||| || ||||| 
Sbjct: 72199 ctccacgcagaagcttctgatgcctcctcgtaatcactccttcgtttcagcacgatgtgg 72140

                                                                         
Query: 486   ccactgatctcccatactgcagggttcaccctgcgtgtccagcagatcctggctcacttc 545
             |||||||||||||| || || ||||| | ||||||||||||| || ||||||||||||||
Sbjct: 72139 ccactgatctcccacacagctgggtt-aacctgcgtgtccagtagctcctggctcacttc 72081

                                           
Query: 546   accaagagcctgtttctcagcatagcactg 575
              || |||||||| ||||| |||||||||||
Sbjct: 72080 tcccagagcctgcttctcggcatagcactg 72051
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>ref|NM_118819.2| Arabidopsis thaliana VTC2 (VITAMIN C DEFECTIVE 2) AT4G26850 (VTC2)
            mRNA, complete cds
          Length = 2084

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 536  ggctcacttcaccaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttc 595
            ||||||||||||| |||||||||||||| || || ||||| || |  | |||||||   |
Sbjct: 1509 ggctcacttcacctagagcctgtttctctgcgtaacactgtggcattaagaagatctgcc 1450

                                             
Query: 596  taccagaatcagagatgaggacgttgaaaggaa 628
            | ||| ||||||||||||| | |||||||||||
Sbjct: 1449 ttccacaatcagagatgagaatgttgaaaggaa 1417
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>gb|AY056134.1| Arabidopsis thaliana unknown protein (At4g26850) mRNA, complete cds
          Length = 2097

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 536  ggctcacttcaccaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttc 595
            ||||||||||||| |||||||||||||| || || ||||| || |  | |||||||   |
Sbjct: 1507 ggctcacttcacctagagcctgtttctctgcgtaacactgtggcattaagaagatctgcc 1448

                                             
Query: 596  taccagaatcagagatgaggacgttgaaaggaa 628
            | ||| ||||||||||||| | |||||||||||
Sbjct: 1447 ttccacaatcagagatgagaatgttgaaaggaa 1415
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>gb|AY093138.1| Arabidopsis thaliana putative protein (At4g26850) mRNA, complete cds
          Length = 2045

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 536  ggctcacttcaccaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttc 595
            ||||||||||||| |||||||||||||| || || ||||| || |  | |||||||   |
Sbjct: 1507 ggctcacttcacctagagcctgtttctctgcgtaacactgtggcattaagaagatctgcc 1448

                                             
Query: 596  taccagaatcagagatgaggacgttgaaaggaa 628
            | ||| ||||||||||||| | |||||||||||
Sbjct: 1447 ttccacaatcagagatgagaatgttgaaaggaa 1415
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>gb|BT006589.1| Arabidopsis thaliana At4g26850 mRNA, complete cds
          Length = 1329

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 536  ggctcacttcaccaagagcctgtttctcagcatagcactgaggaaaaacgaagatccttc 595
            ||||||||||||| |||||||||||||| || || ||||| || |  | |||||||   |
Sbjct: 1006 ggctcacttcacctagagcctgtttctctgcgtaacactgtggcattaagaagatctgcc 947

                                             
Query: 596  taccagaatcagagatgaggacgttgaaaggaa 628
            | ||| ||||||||||||| | |||||||||||
Sbjct: 946  ttccacaatcagagatgagaatgttgaaaggaa 914
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>ref|XM_417003.1| PREDICTED: Gallus gallus similar to highwire; PAM; rpm 1
           (LOC418808), mRNA
          Length = 16077

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 311 aggtggctcgttggattcctcttcttcatca 341
           ||||||||| |||||||||||||||||||||
Sbjct: 900 aggtggctctttggattcctcttcttcatca 870
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>emb|CR353672.1| Gallus gallus finished cDNA, clone ChEST231o13
          Length = 1096

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 311 aggtggctcgttggattcctcttcttcatca 341
           ||||||||| |||||||||||||||||||||
Sbjct: 568 aggtggctctttggattcctcttcttcatca 538
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>ref|NM_124894.4| Arabidopsis thaliana unknown protein AT5G55120 mRNA, complete cds
          Length = 1874

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 1401 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 1342

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1341 gagaatgttgaaaggaa 1325
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>gb|AY091285.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds
          Length = 1327

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 552 agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
           |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 981 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 922

                            
Query: 612 gaggacgttgaaaggaa 628
           ||| | |||||||||||
Sbjct: 921 gagaatgttgaaaggaa 905
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>gb|AY063788.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds
          Length = 1788

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 1297 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 1238

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1237 gagaatgttgaaaggaa 1221
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>emb|BX831350.1|CNS0A1O4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS80ZC01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1806

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 1335 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 1276

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1275 gagaatgttgaaaggaa 1259
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>emb|BX829969.1|CNS0A043 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB4ZG03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1694

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 1285 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 1226

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1225 gagaatgttgaaaggaa 1209
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>emb|BX831865.1|CNS09ZT1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH35ZF07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1838

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 1400 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 1341

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1340 gagaatgttgaaaggaa 1324
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>emb|BX831807.1|CNS09ZUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH30ZF08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1692

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||||||
Sbjct: 1261 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagagat 1202

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1201 gagaatgttgaaaggaa 1185
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>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66
          Length = 198372

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 536  ggctcacttcaccaagagcctgtttctc 563
            ||||||||||||| ||||||||||||||
Sbjct: 3440 ggctcacttcacctagagcctgtttctc 3467
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>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 536    ggctcacttcaccaagagcctgtttctc 563
              ||||||||||||| ||||||||||||||
Sbjct: 196760 ggctcacttcacctagagcctgtttctc 196787
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>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
          Length = 128574

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 536   ggctcacttcaccaagagcctgtttctc 563
             ||||||||||||| ||||||||||||||
Sbjct: 47597 ggctcacttcacctagagcctgtttctc 47624
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>gb|AF508793.1| Arabidopsis thaliana VTC2 (VTC2) gene, complete cds
          Length = 1884

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 536  ggctcacttcaccaagagcctgtttctc 563
            ||||||||||||| ||||||||||||||
Sbjct: 1561 ggctcacttcacctagagcctgtttctc 1534
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>ref|NM_015057.2| Homo sapiens MYC binding protein 2 (MYCBP2), mRNA
          Length = 14734

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 315 ggctcgttggattcctcttcttcatca 341
           ||||| |||||||||||||||||||||
Sbjct: 552 ggctctttggattcctcttcttcatca 526
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>emb|AL159158.12| Human DNA sequence from clone RP11-81G4 on chromosome 13 Contains the
             5' end of a novel gene (KIAA0916) and two CpG islands,
             complete sequence
          Length = 154682

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 315   ggctcgttggattcctcttcttcatca 341
             ||||| |||||||||||||||||||||
Sbjct: 15043 ggctctttggattcctcttcttcatca 15069
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>gb|AF075587.1|AF075587 Homo sapiens protein associated with Myc mRNA, complete cds
          Length = 14807

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 315 ggctcgttggattcctcttcttcatca 341
           ||||| |||||||||||||||||||||
Sbjct: 607 ggctctttggattcctcttcttcatca 581
to top
>gb|AY579201.1| Tetrahymena thermophila DNA topoisomerase type 2 (TOP2A) mRNA,
            complete cds
          Length = 4430

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 326  ttcctcttcttcatcagattca 347
            ||||||||||||||||||||||
Sbjct: 4222 ttcctcttcttcatcagattca 4201
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>ref|XM_809076.1| Trypanosoma cruzi strain CL Brener 69 kDa paraflagellar rod protein
            (Tc00.1047053511215.119) partial mRNA
          Length = 1803

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 377  cttcacctcctcaaatcgctcc 398
            ||||||||||||||||||||||
Sbjct: 1089 cttcacctcctcaaatcgctcc 1068
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>ref|XM_797553.1| Trypanosoma cruzi strain CL Brener paraxonemal rod protein PAR2
           (Tc00.1047053434931.10) partial mRNA
          Length = 795

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 cttcacctcctcaaatcgctcc 398
           ||||||||||||||||||||||
Sbjct: 81  cttcacctcctcaaatcgctcc 60
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>ref|XM_802852.1| Trypanosoma cruzi strain CL Brener 69 kDa paraflagellar rod protein
           (Tc00.1047053508961.79) partial mRNA
          Length = 1080

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 cttcacctcctcaaatcgctcc 398
           ||||||||||||||||||||||
Sbjct: 366 cttcacctcctcaaatcgctcc 345
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>gb|M97548.1|TRBPAR2A Trypanosoma cruzi major paraflagellar rod protein (PAR2) mRNA,
            complete cds
          Length = 2057

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 377  cttcacctcctcaaatcgctcc 398
            ||||||||||||||||||||||
Sbjct: 1137 cttcacctcctcaaatcgctcc 1116
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>gb|BT016612.1| Zea mays clone Contig445 mRNA sequence
          Length = 1419

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 598 ccagaatcagagatgaggacgttgaaagg 626
           ||||| |||||||||||||| ||||||||
Sbjct: 956 ccagattcagagatgaggacattgaaagg 928
to top
>gb|BT018863.1| Zea mays clone EL01N0560H03.d mRNA sequence
          Length = 1874

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 598  ccagaatcagagatgaggacgttgaaagg 626
            ||||| |||||||||||||| ||||||||
Sbjct: 1451 ccagattcagagatgaggacattgaaagg 1423
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>gb|BT013858.1| Lycopersicon esculentum clone 132824R, mRNA sequence
          Length = 2013

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 483  tgtccactgatctcccatactgcagggttcacc 515
            |||||||| || |||||||| ||||||||||||
Sbjct: 1502 tgtccactaatttcccatacagcagggttcacc 1470
to top
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06,
             complete sequence
          Length = 179695

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 321   ttggattcctcttcttcatca 341
             |||||||||||||||||||||
Sbjct: 27655 ttggattcctcttcttcatca 27675
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>emb|Z49131.1|CEZC373 Caenorhabditis elegans Cosmid ZC373, complete sequence
          Length = 27030

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 515   cctgcgtgtccagcagatcctggct 539
             |||| ||||||||||||||||||||
Sbjct: 23716 cctgggtgtccagcagatcctggct 23692
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>emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2 on chromosome 22 Contains
             an STSs and GSSs, complete sequence
          Length = 39004

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 470   tttcagaacaatgtgtccact 490
             |||||||||||||||||||||
Sbjct: 24888 tttcagaacaatgtgtccact 24908
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>gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence
          Length = 202653

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 470   tttcagaacaatgtgtccact 490
             |||||||||||||||||||||
Sbjct: 28242 tttcagaacaatgtgtccact 28262
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>gb|AC139354.5| Medicago truncatula clone mth1-64n13, complete sequence
          Length = 114031

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 324  gattcctcttcttcatcagat 344
            |||||||||||||||||||||
Sbjct: 8255 gattcctcttcttcatcagat 8275
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>gb|AC019205.4| Homo sapiens BAC clone RP11-398K22 from 6, complete sequence
          Length = 198052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   ggtaactaatcagaggcagaa 127
             |||||||||||||||||||||
Sbjct: 95865 ggtaactaatcagaggcagaa 95885
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>ref|NM_077291.2| Caenorhabditis elegans COLlagen family member (col-176) (col-176)
           mRNA, complete cds
          Length = 939

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 515 cctgcgtgtccagcagatcctggct 539
           |||| ||||||||||||||||||||
Sbjct: 559 cctgggtgtccagcagatcctggct 535
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 321     ttggattcctcttcttcatca 341
               |||||||||||||||||||||
Sbjct: 7050851 ttggattcctcttcttcatca 7050831
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 321      ttggattcctcttcttcatca 341
                |||||||||||||||||||||
Sbjct: 11944841 ttggattcctcttcttcatca 11944861
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 327      tcctcttcttcatcagattca 347
                |||||||||||||||||||||
Sbjct: 17929939 tcctcttcttcatcagattca 17929919
to top
>emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB9ZD04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1684

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 552  agcctgtttctcagcatagcactgaggaaaaacgaagatccttctaccagaatcagagat 611
            |||||||||||| || || |||||||| | || |||||| | | | ||||| ||||| ||
Sbjct: 1249 agcctgtttctctgcgtaacactgagggagaaggaagattcgtttgccagagtcagatat 1190

                             
Query: 612  gaggacgttgaaaggaa 628
            ||| | |||||||||||
Sbjct: 1189 gagaatgttgaaaggaa 1173
to top
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0520B06
          Length = 142667

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   tcctcttcttcatcagattca 347
             |||||||||||||||||||||
Sbjct: 49774 tcctcttcttcatcagattca 49754
to top
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1165C09
          Length = 202985

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 321    ttggattcctcttcttcatca 341
              |||||||||||||||||||||
Sbjct: 168899 ttggattcctcttcttcatca 168879
to top
>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0674B07
          Length = 192191

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 321   ttggattcctcttcttcatca 341
             |||||||||||||||||||||
Sbjct: 96337 ttggattcctcttcttcatca 96317
to top
>gb|U91900.1|DBU91900 Dunaliella bardawil phytoene synthase mRNA, complete cds
          Length = 1278

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 368 gatgcatgccttcacctcctc 388
           |||||||||||||||||||||
Sbjct: 984 gatgcatgccttcacctcctc 964
to top
>gb|AY833719.1| Canis familiaris TERT gene, promoter region and partial CDS
          Length = 2054

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  caagagcctgtttctcagca 567
            ||||||||||||||||||||
Sbjct: 1044 caagagcctgtttctcagca 1063
to top
>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence
          Length = 198815

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    acacatacctgtgcttaata 62
             ||||||||||||||||||||
Sbjct: 62708 acacatacctgtgcttaata 62727
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>gb|AC131083.8| Mus musculus chromosome 1, clone RP23-444L13, complete sequence
          Length = 182591

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    cctccaggccgatgcttctg 444
              ||||||||||||||||||||
Sbjct: 172560 cctccaggccgatgcttctg 172541
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 348     gtgaggccggcggcctggaa 367
               ||||||||||||||||||||
Sbjct: 2138822 gtgaggccggcggcctggaa 2138803
to top
>ref|NM_001031001.1| Gallus gallus serpin peptidase inhibitor, clade B (ovalbumin), member
            3 (SERPINB3), mRNA
          Length = 1972

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  attcctcttcttcatcagat 344
            ||||||||||||||||||||
Sbjct: 1162 attcctcttcttcatcagat 1181
to top
>gb|AY563633.1| Canis familiaris telomerase reverse transcriptase subunit gene,
            promoter region, 5'UTR, exons 1, 2 and partial cds
          Length = 5729

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  caagagcctgtttctcagca 567
            ||||||||||||||||||||
Sbjct: 4424 caagagcctgtttctcagca 4443
to top
>gb|DQ465931.1| Fusarium oxysporum isolate SAT75 translation elongation factor 1a
           gene, partial sequence
          Length = 686

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 ccagagtcgacttggccgat 228
           ||||||||||||||||||||
Sbjct: 48  ccagagtcgacttggccgat 29
to top
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence
          Length = 178113

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    taataataaactgcacagta 77
             ||||||||||||||||||||
Sbjct: 77669 taataataaactgcacagta 77688
to top
>gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, complete sequence
          Length = 155092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   ctcagcatagcactgaggaa 580
             ||||||||||||||||||||
Sbjct: 11920 ctcagcatagcactgaggaa 11939
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     gccggcggcctggaagatgc 372
               ||||||||||||||||||||
Sbjct: 3489405 gccggcggcctggaagatgc 3489386
to top
>emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chromosome 11 Contains the 5'
              end of the Osbp2 gene for oxysterol binding protein 2, a
              novel pseudogene, two novel genes, the Dusp18 gene for dual
              specificity phosphatase 18 and five CpG islands, complete
              sequence
          Length = 205509

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 544    tcaccaagagcctgtttctcagca 567
              ||||||||||||||||| ||||||
Sbjct: 188086 tcaccaagagcctgtttatcagca 188109
to top
>gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197964

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 620   tgaaaggaacattgttctcc 639
             ||||||||||||||||||||
Sbjct: 70789 tgaaaggaacattgttctcc 70808
to top
>gb|J00922.1|CHKY Gallus gallus ovalbumin (oval-Y) gene, complete cds
          Length = 8372

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  attcctcttcttcatcagat 344
            ||||||||||||||||||||
Sbjct: 7457 attcctcttcttcatcagat 7476
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>dbj|AK081916.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130087D18 product:hypothetical Dual
           specificity protein phosphatase containing protein, full
           insert sequence
          Length = 2613

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 374 tcaccaagagcctgtttatcagca 397
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>dbj|AK079664.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330102O14 product:weakly
           similar to BA386N14.1 (NOVEL PROTEIN SIMILAR TO A DUAL
           SPECIFICITY PHOSPHATASE) [Homo sapiens], full insert
           sequence
          Length = 2680

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 411 tcaccaagagcctgtttatcagca 434
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>dbj|AK015917.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930527G07 product:weakly similar to DUAL
           SPECIFICITY PROTEIN PHOSPHATASE 14 (EC 3.1.3.48) (EC
           3.1.3.16) (MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE
           6) (MAP KINASE PHOSPHATASE 6) (MKP-6) [Mus musculus],
           full insert sequence
          Length = 1161

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 399 tcaccaagagcctgtttatcagca 422
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>gb|AC084759.2|AC084759 Homo sapiens chromosome 15 clone RP11-643A5 map 15q21.3, complete
              sequence
          Length = 173921

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 620    tgaaaggaacattgttctcc 639
              ||||||||||||||||||||
Sbjct: 113712 tgaaaggaacattgttctcc 113693
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>gb|AC105383.3| Homo sapiens BAC clone RP11-9G1 from 4, complete sequence
          Length = 173956

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   attttcattgctctctcact 246
             ||||||||||||||||||||
Sbjct: 96917 attttcattgctctctcact 96898
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>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   cctccaggccgatgcttctg 444
             ||||||||||||||||||||
Sbjct: 20950 cctccaggccgatgcttctg 20931
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>gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, complete sequence
          Length = 160144

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    ctcagcatagcactgaggaa 580
              ||||||||||||||||||||
Sbjct: 145799 ctcagcatagcactgaggaa 145818
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>ref|NM_173745.4| Mus musculus dual specificity phosphatase 18 (Dusp18), mRNA
          Length = 4589

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 374 tcaccaagagcctgtttatcagca 397
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>gb|AC164661.3| Pan troglodytes BAC clone CH251-11F8 from chromosome unknown, complete
             sequence
          Length = 184521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gtaactaatcagaggcagaa 127
             ||||||||||||||||||||
Sbjct: 87780 gtaactaatcagaggcagaa 87761
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>gb|BC079285.1| Rattus norvegicus dual specificity phosphatase 18, mRNA (cDNA clone
           MGC:94414 IMAGE:7134264), complete cds
          Length = 1367

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 275 tcaccaagagcctgtttatcagca 298
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>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   agcagccacagataatgcgaacct 203
             ||||||||||||||||| ||||||
Sbjct: 23334 agcagccacagataatgagaacct 23311
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>ref|NM_001013128.1| Rattus norvegicus dual specificity phosphatase 18 (Dusp18), mRNA
          Length = 1367

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 275 tcaccaagagcctgtttatcagca 298
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>gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromosome unknown, complete
              sequence
          Length = 207137

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    attcctcttcttcatcagat 344
              ||||||||||||||||||||
Sbjct: 177383 attcctcttcttcatcagat 177402
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>gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromosome unknown, complete
             sequence
          Length = 205302

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   attcctcttcttcatcagat 344
             ||||||||||||||||||||
Sbjct: 54146 attcctcttcttcatcagat 54165
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>gb|BC020036.1| Mus musculus dual specificity phosphatase 18, mRNA (cDNA clone
           MGC:28218 IMAGE:3990751), complete cds
          Length = 2681

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 544 tcaccaagagcctgtttctcagca 567
           ||||||||||||||||| ||||||
Sbjct: 409 tcaccaagagcctgtttatcagca 432


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,938,705
Number of Sequences: 3902068
Number of extensions: 5938705
Number of successful extensions: 113134
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112801
Number of HSP's gapped (non-prelim): 321
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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