ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_482379.1| Oryza sativa (japonica cultivar-group), mRNA 468 e-128
2ref|XM_507581.1| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
3ref|XM_507230.2| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
4dbj|AK104578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
5dbj|AK099367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
6dbj|AK059631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
7emb|AJ575234.1|OSA575234 Oryza sativa (japonica cultivar-group) ... 396 e-107
8gb|AY106169.1| Zea mays PCO082380 mRNA sequence 311 2e-81
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
10dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
11gb|AF465933.1| Elaeis oleifera RNA binding protein mRNA, complet... 54 6e-04
12ref|XM_505404.1| Yarrowia lipolytica CLIB122, YALI0F14245g predi... 44 0.57
13emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 44 0.57
14gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, com... 42 2.3
15gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, comple... 42 2.3
16gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chrom... 42 2.3
17gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.9
18gb|AY648761.1| Danio rerio nucleolin mRNA, complete cds 40 8.9
19ref|XM_456571.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.9
20gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome... 40 8.9
21ref|XM_569763.1| Cryptococcus neoformans var. neoformans JEC21 r... 40 8.9
22emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 40 8.9
23emb|BX511065.4| Zebrafish DNA sequence from clone DKEY-32I16 in ... 40 8.9
24gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswel... 40 8.9
25gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complet... 40 8.9
26gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell... 40 8.9
27ref|XM_683662.1| PREDICTED: Danio rerio similar to Cic protein (... 40 8.9
28ref|NM_001003839.1| Danio rerio nucleolin (ncl), mRNA 40 8.9
29gb|AY166587.1| Cyprinus carpio nucleolin mRNA, complete cds 40 8.9
30emb|BX004874.11| Zebrafish DNA sequence from clone CH211-39E15 i... 40 8.9
31gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23... 40 8.9
32emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-3... 40 8.9
33emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA sequence BAC C-2... 40 8.9

>ref|XM_482379.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 977

 Score =  468 bits (236), Expect = e-128
 Identities = 401/456 (87%)
 Strand = Plus / Minus

                                                                       
Query: 182 tcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacactcgtaa 241
           ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 764 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 705

                                                                       
Query: 242 tcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattccttcg 301
           || || |||||||| ||||||||||||||||||||||||||||| ||||| |||   || 
Sbjct: 704 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 645

                                                                       
Query: 302 accatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaattgct 361
           |||| ||| ||||||||||| | ||||||||||||  | ||||   ||||||||||||||
Sbjct: 644 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 585

                                                                       
Query: 362 acccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaactttc 421
           ||||| |||| ||||||||| |||   |||||||| ||||| ||||| | ||||| ||||
Sbjct: 584 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 525

                                                                       
Query: 422 tccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattcatctca 481
           || ||||| |||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 524 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 465

                                                                       
Query: 482 tcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgcttggac 541
           || || |||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 464 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 405

                                                                       
Query: 542 tttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaag 601
           ||||||||||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||
Sbjct: 404 tttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaag 345

                                               
Query: 602 aaaccttgcatctggtcctcatagaaaccatggggg 637
           |||||||||||||| ||||||||||| |||||||||
Sbjct: 344 aaaccttgcatctgttcctcatagaacccatggggg 309



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>ref|XM_507581.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13
           mRNA
          Length = 983

 Score =  468 bits (236), Expect = e-128
 Identities = 401/456 (87%)
 Strand = Plus / Minus

                                                                       
Query: 182 tcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacactcgtaa 241
           ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 770 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 711

                                                                       
Query: 242 tcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattccttcg 301
           || || |||||||| ||||||||||||||||||||||||||||| ||||| |||   || 
Sbjct: 710 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 651

                                                                       
Query: 302 accatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaattgct 361
           |||| ||| ||||||||||| | ||||||||||||  | ||||   ||||||||||||||
Sbjct: 650 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 591

                                                                       
Query: 362 acccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaactttc 421
           ||||| |||| ||||||||| |||   |||||||| ||||| ||||| | ||||| ||||
Sbjct: 590 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 531

                                                                       
Query: 422 tccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattcatctca 481
           || ||||| |||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 530 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 471

                                                                       
Query: 482 tcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgcttggac 541
           || || |||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 470 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 411

                                                                       
Query: 542 tttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaag 601
           ||||||||||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||
Sbjct: 410 tttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaag 351

                                               
Query: 602 aaaccttgcatctggtcctcatagaaaccatggggg 637
           |||||||||||||| ||||||||||| |||||||||
Sbjct: 350 aaaccttgcatctgttcctcatagaacccatggggg 315



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>ref|XM_507230.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13
           mRNA
          Length = 1096

 Score =  468 bits (236), Expect = e-128
 Identities = 401/456 (87%)
 Strand = Plus / Minus

                                                                       
Query: 182 tcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacactcgtaa 241
           ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 766 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 707

                                                                       
Query: 242 tcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattccttcg 301
           || || |||||||| ||||||||||||||||||||||||||||| ||||| |||   || 
Sbjct: 706 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 647

                                                                       
Query: 302 accatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaattgct 361
           |||| ||| ||||||||||| | ||||||||||||  | ||||   ||||||||||||||
Sbjct: 646 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 587

                                                                       
Query: 362 acccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaactttc 421
           ||||| |||| ||||||||| |||   |||||||| ||||| ||||| | ||||| ||||
Sbjct: 586 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 527

                                                                       
Query: 422 tccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattcatctca 481
           || ||||| |||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 526 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 467

                                                                       
Query: 482 tcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgcttggac 541
           || || |||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 466 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 407

                                                                       
Query: 542 tttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaag 601
           ||||||||||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||
Sbjct: 406 tttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaag 347

                                               
Query: 602 aaaccttgcatctggtcctcatagaaaccatggggg 637
           |||||||||||||| ||||||||||| |||||||||
Sbjct: 346 aaaccttgcatctgttcctcatagaacccatggggg 311



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>dbj|AK104578.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B02, full
           insert sequence
          Length = 977

 Score =  468 bits (236), Expect = e-128
 Identities = 401/456 (87%)
 Strand = Plus / Minus

                                                                       
Query: 182 tcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacactcgtaa 241
           ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 764 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 705

                                                                       
Query: 242 tcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattccttcg 301
           || || |||||||| ||||||||||||||||||||||||||||| ||||| |||   || 
Sbjct: 704 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 645

                                                                       
Query: 302 accatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaattgct 361
           |||| ||| ||||||||||| | ||||||||||||  | ||||   ||||||||||||||
Sbjct: 644 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 585

                                                                       
Query: 362 acccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaactttc 421
           ||||| |||| ||||||||| |||   |||||||| ||||| ||||| | ||||| ||||
Sbjct: 584 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 525

                                                                       
Query: 422 tccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattcatctca 481
           || ||||| |||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 524 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 465

                                                                       
Query: 482 tcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgcttggac 541
           || || |||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 464 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 405

                                                                       
Query: 542 tttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaag 601
           ||||||||||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||
Sbjct: 404 tttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaag 345

                                               
Query: 602 aaaccttgcatctggtcctcatagaaaccatggggg 637
           |||||||||||||| ||||||||||| |||||||||
Sbjct: 344 aaaccttgcatctgttcctcatagaacccatggggg 309



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>dbj|AK099367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M06, full
           insert sequence
          Length = 983

 Score =  468 bits (236), Expect = e-128
 Identities = 401/456 (87%)
 Strand = Plus / Minus

                                                                       
Query: 182 tcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacactcgtaa 241
           ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 770 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 711

                                                                       
Query: 242 tcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattccttcg 301
           || || |||||||| ||||||||||||||||||||||||||||| ||||| |||   || 
Sbjct: 710 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 651

                                                                       
Query: 302 accatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaattgct 361
           |||| ||| ||||||||||| | ||||||||||||  | ||||   ||||||||||||||
Sbjct: 650 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 591

                                                                       
Query: 362 acccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaactttc 421
           ||||| |||| ||||||||| |||   |||||||| ||||| ||||| | ||||| ||||
Sbjct: 590 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 531

                                                                       
Query: 422 tccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattcatctca 481
           || ||||| |||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 530 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 471

                                                                       
Query: 482 tcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgcttggac 541
           || || |||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 470 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 411

                                                                       
Query: 542 tttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaag 601
           ||||||||||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||
Sbjct: 410 tttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaag 351

                                               
Query: 602 aaaccttgcatctggtcctcatagaaaccatggggg 637
           |||||||||||||| ||||||||||| |||||||||
Sbjct: 350 aaaccttgcatctgttcctcatagaacccatggggg 315



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>dbj|AK059631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A04, full
           insert sequence
          Length = 1096

 Score =  468 bits (236), Expect = e-128
 Identities = 401/456 (87%)
 Strand = Plus / Minus

                                                                       
Query: 182 tcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacactcgtaa 241
           ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 766 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 707

                                                                       
Query: 242 tcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattccttcg 301
           || || |||||||| ||||||||||||||||||||||||||||| ||||| |||   || 
Sbjct: 706 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 647

                                                                       
Query: 302 accatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaattgct 361
           |||| ||| ||||||||||| | ||||||||||||  | ||||   ||||||||||||||
Sbjct: 646 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 587

                                                                       
Query: 362 acccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaactttc 421
           ||||| |||| ||||||||| |||   |||||||| ||||| ||||| | ||||| ||||
Sbjct: 586 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 527

                                                                       
Query: 422 tccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattcatctca 481
           || ||||| |||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 526 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 467

                                                                       
Query: 482 tcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgcttggac 541
           || || |||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 466 tccgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 407

                                                                       
Query: 542 tttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaag 601
           ||||||||||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||
Sbjct: 406 tttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaag 347

                                               
Query: 602 aaaccttgcatctggtcctcatagaaaccatggggg 637
           |||||||||||||| ||||||||||| |||||||||
Sbjct: 346 aaaccttgcatctgttcctcatagaacccatggggg 311



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>emb|AJ575234.1|OSA575234 Oryza sativa (japonica cultivar-group) partial mRNA for TA8 protein
          Length = 590

 Score =  396 bits (200), Expect = e-107
 Identities = 356/408 (87%)
 Strand = Plus / Minus

                                                                       
Query: 230 ggacactcgtaatcgataccagcagccttgattcttttgcgacgcttctcatcccgcttt 289
           |||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 590 ggacactcgtaatcaatcccagcagctttgattcttttgcgacgcttctcatcccgtttt 531

                                                                       
Query: 290 acaattccttcgaccatcttcttgtgctcttccactgttttatccttactaagccgattc 349
           || |||   || |||| ||| ||||||||||| | ||||||||||||  | ||||   ||
Sbjct: 530 acgattttgtcaaccaactttttgtgctcttctattgttttatccttgttcagcctcctc 471

                                                                       
Query: 350 cgttcaattgctacccggtcaactggtataaatcccttccgcacacccttccataatttg 409
           ||||||||||||||||| |||| ||||||||| |||   |||||||| ||||| ||||| 
Sbjct: 470 cgttcaattgctacccgatcaattggtataaacccccgtcgcacacctttccacaatttt 411

                                                                       
Query: 410 gcatgaactttctccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtag 469
           | ||||| |||||| ||||| |||| ||||||||||| |||||||||||||| |||||||
Sbjct: 410 ggatgaattttctcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtag 351

                                                                       
Query: 470 ttattcatctcatcagcgacaatcttcgcgacctcagggttctcaaactcgatgaaccca 529
           || ||||||||||| || |||||||| || |||||||||||||||||||| |||||||||
Sbjct: 350 ttgttcatctcatctgccacaatctttgctacctcagggttctcaaactcaatgaaccca 291

                                                                       
Query: 530 taatgcttggactttcctgtcttgcggttccgtgcaaccctgactcttttaacagcccca 589
           ||||||||||||||||||||||||||||| || |||| ||| |  ||||||||||  |||
Sbjct: 290 taatgcttggactttcctgtcttgcggtttcgggcaatcctcaaccttttaacagttcca 231

                                                           
Query: 590 aactgctgaaagaaaccttgcatctggtcctcatagaaaccatggggg 637
           || ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 230 aattgctgaaagaaaccttgcatctgttcctcatagaacccatggggg 183



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>gb|AY106169.1| Zea mays PCO082380 mRNA sequence
          Length = 1072

 Score =  311 bits (157), Expect = 2e-81
 Identities = 385/461 (83%)
 Strand = Plus / Minus

                                                                       
Query: 177 cctcatcaaacttgatcttcttagctgaaggctgaacgcttccgataagggccggacact 236
           ||||||| ||||||||||| || ||||| || |||| ||| || ||||| || |||||||
Sbjct: 800 cctcatcgaacttgatctttttcgctgatggttgaatgctccctataagagctggacact 741

                                                                       
Query: 237 cgtaatcgataccagcagccttgattcttttgcgacgcttctcatcccgctttacaattc 296
           | || || |||||||| |||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 740 catagtcaataccagctgccttgattcttttgcgacgctttccatcccgctttacaattc 681

                                                                       
Query: 297 cttcgaccatcttcttgtgctcttccactgttttatccttactaagccgattccgttcaa 356
           |||| |||||||| ||||||||| | || || ||||||||  |  | |  ||||||||||
Sbjct: 680 cttcaaccatctttttgtgctctgctacagtcttatccttgttgtgtctcttccgttcaa 621

                                                                       
Query: 357 ttgctacccggtcaactggtataaatcccttccgcacacccttccataatttggcatgaa 416
           ||||||| || ||||| |||||||||||| | ||||| || ||||||||||| | |||||
Sbjct: 620 ttgctactcgatcaacaggtataaatccccttcgcacccctttccataatttaggatgaa 561

                                                                       
Query: 417 ctttctccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagttattca 476
           ||||||| ||    ||||| |||| |||||  ||| |||||||||| || ||||||||||
Sbjct: 560 ctttctctggctcaacaagtgcaacttgcaaggtgcgctcaaacaagagatagttattca 501

                                                                       
Query: 477 tctcatcagcgacaatcttcgcgacctcagggttctcaaactcgatgaacccataatgct 536
           ||||||| || || | ||| || ||  |||||||||||||||| ||||| ||||| ||||
Sbjct: 500 tctcatctgctacgacctttgccacagcagggttctcaaactcaatgaatccatagtgct 441

                                                                       
Query: 537 tggactttcctgtcttgcggttccgtgcaaccctgactcttttaacagccccaaactgct 596
           |||||||||||||||||||||| || || | ||| |  || |||| | ||||||||||||
Sbjct: 440 tggactttcctgtcttgcggttacgagcgatcctaagcctcttaatatccccaaactgct 381

                                                    
Query: 597 gaaagaaaccttgcatctggtcctcatagaaaccatggggg 637
            |||||| |||| ||||| |||||| |||||||||||||||
Sbjct: 380 taaagaaccctttcatctcgtcctcgtagaaaccatggggg 340



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  107 bits (54), Expect = 5e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                            
Query: 230      ggacactcgtaatcgataccagcagccttgattcttttgcgacgcttctcatcccgcttt 289
                |||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 19715326 ggacactcgtaatcaatcccagcagctttgattcttttgcgacgcttctcatcccgtttt 19715385

                                                              
Query: 290      acaattccttcgaccatcttcttgtgctcttccactgttttatcct 335
                || |||   || |||| ||| ||||||||||| | |||||||||||
Sbjct: 19715386 acgattttgtcaaccaactttttgtgctcttctattgttttatcct 19715431



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                                    
Query: 500      acctcagggttctcaaactcgatgaacccataatgcttggactttcctgtct 551
                |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 19716270 acctcagggttctcaaactcaatgaacccataatgcttggactttcctgtct 19716321



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                            
Query: 412      atgaactttctccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagtt 471
                ||||| |||||| ||||| |||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 19716089 atgaattttctcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagtt 19716148

                                        
Query: 472      attcatctcatcagcgacaatctt 495
                 ||||||||||| || ||||||||
Sbjct: 19716149 gttcatctcatctgccacaatctt 19716172



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                         
Query: 182      tcaaacttgatcttcttagctgaaggctgaacgcttccgat 222
                ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19714355 tcaaacttgatcttcttagctgaaggctgaacgctgccgat 19714395



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348      tccgttcaattgctacccggtcaactggtataaatcccttccgcacacccttcca 402
                ||||||||||||||||||| |||| ||||||||| |||   |||||||| |||||
Sbjct: 19715517 tccgttcaattgctacccgatcaattggtataaacccccgtcgcacacctttcca 19715571



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 604      accttgcatctggtcctcatagaaaccatggggg 637
                |||||||||||| ||||||||||| |||||||||
Sbjct: 19718189 accttgcatctgttcctcatagaacccatggggg 19718222



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 550      cttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaagaaacct 607
                ||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||||||||
Sbjct: 19716391 cttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaagaaacct 19716448



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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score =  107 bits (54), Expect = 5e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                         
Query: 230   ggacactcgtaatcgataccagcagccttgattcttttgcgacgcttctcatcccgcttt 289
             |||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 44277 ggacactcgtaatcaatcccagcagctttgattcttttgcgacgcttctcatcccgtttt 44336

                                                           
Query: 290   acaattccttcgaccatcttcttgtgctcttccactgttttatcct 335
             || |||   || |||| ||| ||||||||||| | |||||||||||
Sbjct: 44337 acgattttgtcaaccaactttttgtgctcttctattgttttatcct 44382



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                                 
Query: 500   acctcagggttctcaaactcgatgaacccataatgcttggactttcctgtct 551
             |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 45221 acctcagggttctcaaactcaatgaacccataatgcttggactttcctgtct 45272



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 412   atgaactttctccggtgggacaagcgcaatttgcagagtgtgctcaaacaacaggtagtt 471
             ||||| |||||| ||||| |||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 45040 atgaattttctcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagtt 45099

                                     
Query: 472   attcatctcatcagcgacaatctt 495
              ||||||||||| || ||||||||
Sbjct: 45100 gttcatctcatctgccacaatctt 45123



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                      
Query: 182   tcaaacttgatcttcttagctgaaggctgaacgcttccgat 222
             ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 43306 tcaaacttgatcttcttagctgaaggctgaacgctgccgat 43346



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 348   tccgttcaattgctacccggtcaactggtataaatcccttccgcacacccttcca 402
             ||||||||||||||||||| |||| ||||||||| |||   |||||||| |||||
Sbjct: 44468 tccgttcaattgctacccgatcaattggtataaacccccgtcgcacacctttcca 44522



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 604   accttgcatctggtcctcatagaaaccatggggg 637
             |||||||||||| ||||||||||| |||||||||
Sbjct: 47140 accttgcatctgttcctcatagaacccatggggg 47173



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 550   cttgcggttccgtgcaaccctgactcttttaacagccccaaactgctgaaagaaacct 607
             ||||||||| || |||| ||| |  ||||||||||  ||||| |||||||||||||||
Sbjct: 45342 cttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaagaaacct 45399



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>gb|AF465933.1| Elaeis oleifera RNA binding protein mRNA, complete cds
          Length = 958

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 450 tgtgctcaaacaacaggtagttattcatctcatcagcgacaatcttcgcgacctcagggt 509
           |||||||||| || ||||| || ||||||||||| || |||| ||| || ||||||||||
Sbjct: 415 tgtgctcaaataataggtaattgttcatctcatcggccacaaccttggccacctcagggt 356

                  
Query: 510 tctcaaa 516
           | |||||
Sbjct: 355 tttcaaa 349



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 586 cccaaactgctgaaagaaaccttgcatctggtcctcatagaaaccatg 633
           |||||||||||| ||||| |||||||| || ||||| ||||| |||||
Sbjct: 279 cccaaactgctggaagaatccttgcatttgctcctcgtagaatccatg 232



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>ref|XM_505404.1| Yarrowia lipolytica CLIB122, YALI0F14245g predicted mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 608 tgcatctggtcctcatagaaaccatggggg 637
           |||||||| ||||| |||||||||||||||
Sbjct: 359 tgcatctgctcctcgtagaaaccatggggg 330



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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 608     tgcatctggtcctcatagaaaccatggggg 637
               |||||||| ||||| |||||||||||||||
Sbjct: 1915897 tgcatctgctcctcgtagaaaccatggggg 1915868



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>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence
          Length = 160042

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    ggatacaaaaccaaagtatga 74
             |||||||||||||||||||||
Sbjct: 53101 ggatacaaaaccaaagtatga 53121



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>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence
          Length = 169385

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     ggatacaaaaccaaagtatga 74
              |||||||||||||||||||||
Sbjct: 118064 ggatacaaaaccaaagtatga 118084



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>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown, complete
              sequence
          Length = 232130

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     ggatacaaaaccaaagtatga 74
              |||||||||||||||||||||
Sbjct: 114467 ggatacaaaaccaaagtatga 114487



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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 234     actcgtaatcgataccagcagcct 257
               |||||||||||||||| |||||||
Sbjct: 1658722 actcgtaatcgataccggcagcct 1658745



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>gb|AY648761.1| Danio rerio nucleolin mRNA, complete cds
          Length = 2672

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  tcatcaaacttgatcttctt 198
            ||||||||||||||||||||
Sbjct: 2074 tcatcaaacttgatcttctt 2055



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>ref|XM_456571.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A05764g)
           partial mRNA
          Length = 771

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 513 caaactcgatgaacccataatgcttggactttcctgtctt 552
           |||| |||||||||||||| ||||| ||||| || |||||
Sbjct: 478 caaattcgatgaacccatagtgcttcgacttaccagtctt 439



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>gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome 1, complete sequence
          Length = 207503

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   aaagatccatctgcctcctg 166
             ||||||||||||||||||||
Sbjct: 27087 aaagatccatctgcctcctg 27068



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>ref|XM_569763.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal large subunit
            biogenesis-related protein (CNC05560) partial mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 234  actcgtaatcgataccagcagcct 257
            |||||||||||||||| |||||||
Sbjct: 1452 actcgtaatcgataccggcagcct 1429



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>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
              hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 513    caaactcgatgaacccataatgcttggactttcctgtctt 552
              |||| |||||||||||||| ||||| ||||| || |||||
Sbjct: 466577 caaattcgatgaacccatagtgcttcgacttaccagtctt 466538



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>emb|BX511065.4| Zebrafish DNA sequence from clone DKEY-32I16 in linkage group 7,
             complete sequence
          Length = 104505

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   aaactgctgaaagaaacctt 608
             ||||||||||||||||||||
Sbjct: 23828 aaactgctgaaagaaacctt 23809



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>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181004

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    gttcaattgctacccggtca 370
              ||||||||||||||||||||
Sbjct: 151562 gttcaattgctacccggtca 151543



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>gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complete sequence
          Length = 192263

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 598   aaagaaaccttgcatctggt 617
             ||||||||||||||||||||
Sbjct: 58431 aaagaaaccttgcatctggt 58450



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>gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 183714

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   gttcaattgctacccggtca 370
             ||||||||||||||||||||
Sbjct: 89352 gttcaattgctacccggtca 89371



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>ref|XM_683662.1| PREDICTED: Danio rerio similar to Cic protein (LOC560266), mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 184  aaacttgatcttcttagctgaagg 207
            |||||||||||| |||||||||||
Sbjct: 1125 aaacttgatctttttagctgaagg 1102



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>ref|NM_001003839.1| Danio rerio nucleolin (ncl), mRNA
          Length = 2672

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  tcatcaaacttgatcttctt 198
            ||||||||||||||||||||
Sbjct: 2074 tcatcaaacttgatcttctt 2055



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>gb|AY166587.1| Cyprinus carpio nucleolin mRNA, complete cds
          Length = 2784

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  tcatcaaacttgatcttctt 198
            ||||||||||||||||||||
Sbjct: 2185 tcatcaaacttgatcttctt 2166



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>emb|BX004874.11| Zebrafish DNA sequence from clone CH211-39E15 in linkage group 19,
              complete sequence
          Length = 165154

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 184    aaacttgatcttcttagctgaagg 207
              |||||||||||| |||||||||||
Sbjct: 139243 aaacttgatctttttagctgaagg 139266



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>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete
             sequence
          Length = 255329

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   gttcaattgctacccggtca 370
             ||||||||||||||||||||
Sbjct: 65839 gttcaattgctacccggtca 65858



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>emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-330O19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 218956

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 575    cttttaacagccccaaactg 594
              ||||||||||||||||||||
Sbjct: 195243 cttttaacagccccaaactg 195224



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>emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA sequence BAC C-2216L14 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 120571

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    cttttaacagccccaaactg 594
              ||||||||||||||||||||
Sbjct: 107747 cttttaacagccccaaactg 107766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,002,912
Number of Sequences: 3902068
Number of extensions: 5002912
Number of successful extensions: 95581
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95454
Number of HSP's gapped (non-prelim): 117
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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