ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15f06 |
|---|---|
| Clone Library Name | barley_pub |
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)| Length = 261 Score = 292 bits (747), Expect = 7e-79 Identities = 148/167 (88%), Positives = 156/167 (93%), Gaps = 1/167 (0%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F IGFTKRRPNQVKRTCYA Sbjct: 96 LTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 QASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEVIGKEIEKATSSIFPLQNV+VRKVK Sbjct: 156 QASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAAE 141 ILKAPKFDLGKLMEVHGDY KED+G KLDRP DE + G +EVAAAE Sbjct: 216 ILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG-QEVAAAE 261
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)| Length = 259 Score = 271 bits (693), Expect = 1e-72 Identities = 133/164 (81%), Positives = 145/164 (88%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF IGFTK+R NQ KRTCYA Sbjct: 96 LTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE IG+EIEKATSSI+PLQNV++RKVK Sbjct: 156 QSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 147 ILKAPKFDLGKLMEVHGDY ED+G KLDRP + V E + A Sbjct: 216 ILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVAEPTEVIGA 259
>RS3A_HELAN (P49198) 40S ribosomal protein S3a| Length = 259 Score = 270 bits (691), Expect = 2e-72 Identities = 134/165 (81%), Positives = 147/165 (89%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF IGFTK+R NQVKRTCYA Sbjct: 96 LTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+SQI+QIRRKM EIMV QA +CDLKELV KFIPE IG+EIEKATSSI+PLQNV++RKVK Sbjct: 156 QSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAAA 144 ILKAPKFD+GKLMEVHGDY EDVGVKLDRP +E P A EV A Sbjct: 216 ILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAAPEATEVIGA 259
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a| Length = 261 Score = 262 bits (669), Expect = 7e-70 Identities = 130/166 (78%), Positives = 143/166 (86%), Gaps = 1/166 (0%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF I FTKRR NQVKRTCYA Sbjct: 96 LTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+EIEKAT I+PLQNV++RKVK Sbjct: 156 QSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAA 144 ILKAPKFDLGKLMEVHGDY EDVGVK+DRP + ++ E+ A Sbjct: 216 ILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 261
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein| BIS289) Length = 261 Score = 252 bits (643), Expect = 8e-67 Identities = 129/167 (77%), Positives = 143/167 (85%), Gaps = 2/167 (1%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I FTKRR NQVKRTCYA Sbjct: 96 LTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYA 155 Query: 458 QASQIRQIRRKMVEIMV-NQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 282 Q+SQIRQIR KM EIM+ +A+SCDLKELV KFIPE IGK+IEKAT I+PLQNV++RKV Sbjct: 156 QSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKV 215 Query: 281 KILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAA 144 KILKAPKFDL KLMEVHGDY EDVGVK+DRP DEV+ E+ A Sbjct: 216 KILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADEVVEEPTEIIGA 261
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a| Length = 247 Score = 215 bits (547), Expect = 1e-55 Identities = 109/148 (73%), Positives = 126/148 (85%), Gaps = 1/148 (0%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I FTK+RPN R YA Sbjct: 95 LTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAFTKKRPNHT-RNFYA 153 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK-ATSSIFPLQNVYVRKV 282 Q+SQI IRRKM EIMV +A +CDLKELV KFIPEVIGKEI++ + I+PLQ+ ++RKV Sbjct: 154 QSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKV 212 Query: 281 KILKAPKFDLGKLMEVHGDYKEDVGVKL 198 KILKAPKFDL KLMEVHGDY E+VG K+ Sbjct: 213 KILKAPKFDLMKLMEVHGDYNEEVGAKI 240
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a| Length = 265 Score = 206 bits (523), Expect = 6e-53 Identities = 100/163 (61%), Positives = 127/163 (77%), Gaps = 9/163 (5%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTKRR NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKRRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ +D G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERADGYE 258
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector| protein) Length = 265 Score = 204 bits (520), Expect = 1e-52 Identities = 99/163 (60%), Positives = 127/163 (77%), Gaps = 9/163 (5%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQV++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQVRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ +D G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERADGYE 258
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a| Length = 266 Score = 204 bits (518), Expect = 2e-52 Identities = 98/164 (59%), Positives = 127/164 (77%), Gaps = 10/164 (6%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD----------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ + D G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYE 259
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a| Length = 263 Score = 204 bits (518), Expect = 2e-52 Identities = 98/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYE 256
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a| Length = 263 Score = 203 bits (516), Expect = 4e-52 Identities = 98/161 (60%), Positives = 126/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGYE 256
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)| Length = 263 Score = 203 bits (516), Expect = 4e-52 Identities = 98/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGYE 256
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a| Length = 263 Score = 202 bits (515), Expect = 5e-52 Identities = 97/161 (60%), Positives = 126/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KMVEIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +VYVRKVK Sbjct: 156 QHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADGYE 256
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a| Length = 263 Score = 202 bits (515), Expect = 5e-52 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +V+VRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a| Length = 263 Score = 202 bits (515), Expect = 5e-52 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +V+VRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a| Length = 263 Score = 202 bits (515), Expect = 5e-52 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +V+VRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)| Length = 260 Score = 202 bits (515), Expect = 5e-52 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 93 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 152 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +V+VRKVK Sbjct: 153 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVK 212 Query: 278 ILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 213 MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 253
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector| protein) [Contains: 40S ribosomal protein S3b] Length = 263 Score = 202 bits (514), Expect = 7e-52 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +V+VRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYE 256
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a| Length = 263 Score = 202 bits (514), Expect = 7e-52 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA SI+PL +V+VRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYE 256
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a| Length = 263 Score = 201 bits (512), Expect = 1e-51 Identities = 96/161 (59%), Positives = 127/161 (78%), Gaps = 7/161 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YA Sbjct: 96 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK++EKA SI+PL +V+VRKVK Sbjct: 156 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKACQSIYPLHDVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 177 +LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 216 MLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)| Length = 251 Score = 196 bits (498), Expect = 5e-50 Identities = 97/147 (65%), Positives = 120/147 (81%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LT+F G+ T+DKLRSLVRKWQT IEA +KTTD Y+ R+F IGFT+RR NQVK+T YA Sbjct: 96 LTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVIGFTRRRANQVKKTTYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+SQIR IR+KM +++ NQ +SC ++ELV K IPEVIG+EIE+AT SIFPLQNV VRKVK Sbjct: 156 QSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERATGSIFPLQNVLVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYKEDVGVKL 198 ILKAPK D KL+E+HG+ +DVG K+ Sbjct: 216 ILKAPKHDAQKLLELHGE-SQDVGTKV 241
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)| Length = 264 Score = 196 bits (497), Expect = 6e-50 Identities = 97/162 (59%), Positives = 125/162 (77%), Gaps = 8/162 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GM T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAIGFTK+R NQVK+TCYA Sbjct: 96 LTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQVKKTCYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q +Q++ IR+KMVEI+ + +S D+KE+VNK IP+ IGK+IEK+ I+PL +V + KVK Sbjct: 156 QHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLIHKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 177 +LK PKFD+GKLME+HG+ + G K+DR DG E Sbjct: 216 VLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDRVDGYE 257
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)| Length = 255 Score = 195 bits (495), Expect = 1e-49 Identities = 93/157 (59%), Positives = 128/157 (81%), Gaps = 1/157 (0%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI FTKR+PNQ+K T YA Sbjct: 96 LTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKETTYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+S++R+ R+KM+EI+ + ++C L +L +K IPEVIG+EIEK+T +IFPLQNV++RKVK Sbjct: 156 QSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEVI 171 +LK PKFD G L+ +HG+ E+ G K+ D V+ Sbjct: 216 LLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVL 252
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)| Length = 251 Score = 191 bits (486), Expect = 1e-48 Identities = 95/147 (64%), Positives = 119/147 (80%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LT+F G D T+DKLRSLVRKWQ+ IEA+ +KTTD Y+ R+F IGFT RR NQVK+T YA Sbjct: 96 LTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+SQIR I +KM +++ NQA C +KELV K IPEVIG+ IEKAT++I+PLQNV+VRKVK Sbjct: 156 QSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGDYKEDVGVKL 198 ILKAPK D KL+E+HG+ +DVG K+ Sbjct: 216 ILKAPKHDAQKLLELHGE-SQDVGSKV 241
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)| Length = 254 Score = 183 bits (465), Expect = 3e-46 Identities = 89/138 (64%), Positives = 112/138 (81%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI FT+++ NQVKR YA Sbjct: 96 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+S IR IR+ + EI+ + + L +L +K IPEVI KEIE AT IFPLQN++VRKVK Sbjct: 156 QSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD 225 +LK PKFD+G LM +HG+ Sbjct: 216 LLKQPKFDVGALMALHGE 233
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)| Length = 254 Score = 183 bits (464), Expect = 4e-46 Identities = 89/138 (64%), Positives = 111/138 (80%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI FT+++ NQVKR YA Sbjct: 96 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYA 155 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q+S IR IR+ + EI+ + L +L +K IPEVI KEIE AT IFPLQN++VRKVK Sbjct: 156 QSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVK 215 Query: 278 ILKAPKFDLGKLMEVHGD 225 +LK PKFD+G LM +HG+ Sbjct: 216 LLKQPKFDVGALMALHGE 233
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)| Length = 267 Score = 174 bits (441), Expect = 2e-43 Identities = 84/162 (51%), Positives = 113/162 (69%), Gaps = 8/162 (4%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 L NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F IGFT + ++TCYA Sbjct: 99 LCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYA 158 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q SQ+R+IR +M +I+ N+ + DLK+LVNK + I K+IEK+ I+PL +VY+RKVK Sbjct: 159 QQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVK 218 Query: 278 ILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 177 +LK P+FD+ KL+E+HGD G +DRP+G E Sbjct: 219 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 260
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a| Length = 256 Score = 171 bits (432), Expect = 2e-42 Identities = 86/156 (55%), Positives = 111/156 (71%), Gaps = 2/156 (1%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF M T DKL S+V+KW TLIEA+ VKTTD Y LR+F I FTK+ NQVK+T Y Sbjct: 94 LTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYT 153 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 + S+IR+IR +M+ + + CDLKE+V+K IP+ IGK+IEK S ++PLQ VY+RKVK Sbjct: 154 KTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVK 213 Query: 278 ILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 177 I+K PK DLG+L ++HGD G K+DRPD E Sbjct: 214 IIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)| Length = 268 Score = 169 bits (429), Expect = 5e-42 Identities = 82/138 (59%), Positives = 102/138 (73%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LTNF GM TTDKLRS+V KWQTLIE VDVKTTD +MLR+F IGFT + ++TCYA Sbjct: 99 LTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYA 158 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 Q SQI+ IR KM I+ + S DLK +V K +P+ I K+IEKA ++PL +VY+RKVK Sbjct: 159 QHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVK 218 Query: 278 ILKAPKFDLGKLMEVHGD 225 +LK P+FDL LME+HGD Sbjct: 219 VLKKPRFDLSSLMELHGD 236
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae| Length = 203 Score = 72.8 bits (177), Expect = 8e-13 Identities = 42/124 (33%), Positives = 71/124 (57%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T+ G + TTD +RS+V++ + I+A+VDVKT D Y++R+ FT +R A+ Sbjct: 80 TDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCFTIKR---------AR 130 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 +SQ++ IR MVEI+ +AA D + + + I + I + I+PL+ V +RK ++ Sbjct: 131 SSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTEV 190 Query: 275 LKAP 264 P Sbjct: 191 ETIP 194
>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae| Length = 198 Score = 72.0 bits (175), Expect = 1e-12 Identities = 43/125 (34%), Positives = 64/125 (51%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ RR Q Sbjct: 80 TKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMRR---------IQ 130 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ R IR+ M EI+ +A + K+ V + + I EI K I+PL+ +RK+K+ Sbjct: 131 TSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPLRKAEIRKIKV 190 Query: 275 LKAPK 261 L+ P+ Sbjct: 191 LEEPQ 195
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae| Length = 211 Score = 71.2 bits (173), Expect = 2e-12 Identities = 42/124 (33%), Positives = 67/124 (54%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T FW + T + L SL R+ + IE VDV T D Y LR+ ++ FT RR + Sbjct: 83 TKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRR---------CK 133 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ R IR M +I+V +A+S + + + + + + EI K I+P++ V +RK+++ Sbjct: 134 TSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIEL 193 Query: 275 LKAP 264 L P Sbjct: 194 LAEP 197
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae| Length = 221 Score = 70.5 bits (171), Expect = 4e-12 Identities = 37/125 (29%), Positives = 67/125 (53%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LT F G++ T D +RSLVRK + + A +VKT D ++R+ +G T R +++ Sbjct: 88 LTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKSA-- 145 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 +R+KM+E +V +AA D + + + + + ++ I P++ V + K+K Sbjct: 146 -------MRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIK 198 Query: 278 ILKAP 264 +LK P Sbjct: 199 VLKYP 203
>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae| Length = 199 Score = 70.1 bits (170), Expect = 5e-12 Identities = 43/125 (34%), Positives = 63/125 (50%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ RR Q Sbjct: 82 TKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAIAMRR---------IQ 132 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ R IR+ M EI+ +A + K+ V + + I EI K I+PL+ +RK+K+ Sbjct: 133 TSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGKKIYPLKKAEIRKIKV 192 Query: 275 LKAPK 261 L P+ Sbjct: 193 LGEPE 197
>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae| Length = 199 Score = 69.7 bits (169), Expect = 7e-12 Identities = 43/125 (34%), Positives = 63/125 (50%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ RR Q Sbjct: 81 TKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAARR---------IQ 131 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ R IR+ M EI+ +A + K+ V + + I EI K I+PL+ +RK+K+ Sbjct: 132 TSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIKV 191 Query: 275 LKAPK 261 L P+ Sbjct: 192 LGEPE 196
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae| Length = 211 Score = 69.7 bits (169), Expect = 7e-12 Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 + F G D +RSLVR+ + I+ +DV T D Y +R+ + FT RR A+ Sbjct: 73 SKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRR---------AK 123 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKEIEKATSSIFPLQNVYVR 288 SQ R IR++M +++ A CD E + + + E I ++I++A I+P++ +R Sbjct: 124 TSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIR 183 Query: 287 KVKILKAP 264 K ++L+ P Sbjct: 184 KTEVLEEP 191
>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae| Length = 197 Score = 68.6 bits (166), Expect = 2e-11 Identities = 44/125 (35%), Positives = 64/125 (51%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F+G + + D +RSLVR+ + I A VDV T D YMLR+ + T R A Sbjct: 81 TIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR---------AH 131 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ IR+ + +I +A D + V I + +I + I+PL+ V + K K+ Sbjct: 132 ISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKL 191 Query: 275 LKAPK 261 LKAPK Sbjct: 192 LKAPK 196
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae| Length = 204 Score = 67.4 bits (163), Expect = 3e-11 Identities = 38/124 (30%), Positives = 71/124 (57%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T+ G + TTD +RS+V++ + I+A+VDV+T D +++R+ FT +R A+ Sbjct: 80 TDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKR---------AR 130 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 +SQ++ IR MV+I+ +A+ D + + + I + I + I+PL+ V +RK ++ Sbjct: 131 SSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQV 190 Query: 275 LKAP 264 P Sbjct: 191 EAMP 194
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae| Length = 193 Score = 67.0 bits (162), Expect = 4e-11 Identities = 42/125 (33%), Positives = 64/125 (51%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 LT F G + + D +RSLVR+ + I+A DV T D Y+LR+ + T R A Sbjct: 77 LTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYR---------A 127 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 SQ +IR+ + I+ +A+ E V + + +I + I+PL+ V V K K Sbjct: 128 HRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRKVEVEKTK 187 Query: 278 ILKAP 264 +LKAP Sbjct: 188 LLKAP 192
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae| Length = 213 Score = 62.4 bits (150), Expect = 1e-09 Identities = 42/152 (27%), Positives = 75/152 (49%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F + T D LRSLVR+ + +EA++ V TTD+Y +++ + T ++ A Sbjct: 77 TEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------AD 127 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 ASQ + IRR M++++ A ++L++ + + I I+PL+ V ++K + Sbjct: 128 ASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTL 187 Query: 275 LKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 180 P+ EV + E+ V +D D D Sbjct: 188 EARPE-------EVAAE--EETAVDVDEEDVD 210
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae| Length = 195 Score = 61.6 bits (148), Expect = 2e-09 Identities = 38/124 (30%), Positives = 65/124 (52%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F G TTD +RS++R+ + ++A V V+T D Y L++ + T RR A+ Sbjct: 80 TRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLAITIRR---------AK 130 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 +SQ + +R+ + E + A+ +ELV + I EI I+PL+ V + K ++ Sbjct: 131 SSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQAKKIYPLKRVEIIKSRV 190 Query: 275 LKAP 264 L+ P Sbjct: 191 LEEP 194
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae| Length = 208 Score = 61.2 bits (147), Expect = 2e-09 Identities = 38/134 (28%), Positives = 70/134 (52%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 +T F G + + D LRSL+R+ + I + DV T D Y++R+ + T + +Q ++T Sbjct: 78 ITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQKTA-- 135 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 IR+ + E + +A+ + + + + EI +A I+PL+ + K K Sbjct: 136 -------IRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAEIEKTK 188 Query: 278 ILKAPKFDLGKLME 237 +LK P+ +LGK +E Sbjct: 189 VLKVPE-NLGKQVE 201
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae| Length = 200 Score = 59.3 bits (142), Expect = 9e-09 Identities = 37/124 (29%), Positives = 59/124 (47%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F G +RSLVR+ T ++ ++ T D Y LR+ + RR Q Sbjct: 84 TKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYRR---------IQ 134 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ R IR+ + +I+ +A + + V + + I EI K I+P++ VRK+K+ Sbjct: 135 TSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEVRKIKV 194 Query: 275 LKAP 264 L P Sbjct: 195 LAEP 198
>RS3A_METJA (P54059) 30S ribosomal protein S3Ae| Length = 222 Score = 56.2 bits (134), Expect = 8e-08 Identities = 34/126 (26%), Positives = 65/126 (51%) Frame = -1 Query: 638 LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYA 459 + ++G D T + ++S +R+ ++ I+A +DVKT D + +R A+ T R N +++ Sbjct: 86 IAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTKQKS--- 142 Query: 458 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 IR+KM EI+ A + V + + ++I+ IFP++NV + K + Sbjct: 143 ------DIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKSE 196 Query: 278 ILKAPK 261 +L K Sbjct: 197 VLSLAK 202
>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae| Length = 206 Score = 55.1 bits (131), Expect = 2e-07 Identities = 35/125 (28%), Positives = 60/125 (48%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F + T D RSLVR+ + + V V TTD+Y +R+ + +T ++ +Q Sbjct: 76 TQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAYTTKQADQ-------- 127 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 SQ IRR M++++ + L+N I + I ++I+PL+ V V K + Sbjct: 128 -SQQHAIRRTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEANTIYPLRRVEVEKATL 186 Query: 275 LKAPK 261 P+ Sbjct: 187 EAHPE 191
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae| Length = 221 Score = 52.4 bits (124), Expect = 1e-06 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F G + D +R L R+ + + +V T D Y LR+ A+ FT++R + Sbjct: 84 TRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQR---------CK 134 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKEIEKATSSIFPLQNVYVR 288 SQ IR+ M EI+ +A L EL+ + + I+++ I+PL+ V + Sbjct: 135 TSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIA 194 Query: 287 KVKILKAP 264 K K+L P Sbjct: 195 KSKLLWVP 202
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae| Length = 215 Score = 52.0 bits (123), Expect = 1e-06 Identities = 37/135 (27%), Positives = 65/135 (48%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F G D +R LVR+ + I+ DVKT+DN ++ + + T + K+ Sbjct: 81 TIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---- 136 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 QIR+ + + ++N+ S E V I + I ++ AT I+PL+ + VRK ++ Sbjct: 137 -----QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSEL 191 Query: 275 LKAPKFDLGKLMEVH 231 + L + E+H Sbjct: 192 V-----SLSGISEIH 201
>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae| Length = 215 Score = 42.7 bits (99), Expect = 0.001 Identities = 35/162 (21%), Positives = 71/162 (43%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F G D +R LVR+ + I+ DVKT+D ++ + + + + K++ Sbjct: 81 TIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVVSDGKLTNTKKS---- 136 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 +IR+ + +V++ + + V I + ++ +AT +I+PL+ + +RK Sbjct: 137 -----EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATKNIYPLRKIEIRK--- 188 Query: 275 LKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 150 +L+ + G + P +E PG E +A Sbjct: 189 --------SELVSLSG---------MQEPQKNEPAPGGEAIA 213
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/121 (22%), Positives = 55/121 (45%) Frame = -1 Query: 635 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQ 456 T F G + D +R +VR+ + I+ + KT D Y L + + + + KR Sbjct: 80 TEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSKLTANKRG---- 135 Query: 455 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 276 ++R K++ + + S L EL I + + +I ++P++ + +RK ++ Sbjct: 136 -----EVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEV 190 Query: 275 L 273 L Sbjct: 191 L 191
>RPOB_STRAW (Q82DQ5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1181 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = -1 Query: 353 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 177 ++GK K + + P + + +R + KA + L HG+ + +GV++ DR +GDE Sbjct: 808 LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 866 Query: 176 VIPGAEEV 153 + PG ++ Sbjct: 867 LPPGVNQL 874
>PGK_MYCMS (P62415) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 404 Score = 29.6 bits (65), Expect = 7.9 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Frame = -1 Query: 548 VKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVN 369 V T DN ++ F N K ++ S+I+ K+ + + A L+EL+N Sbjct: 33 VITDDNRIIAAFPT-INYLLENDAKIVLFSHLSRIKSKEDKLKKSLAPVAKR--LEELLN 89 Query: 368 K---FIPEVIGKEIEKATSSIFPLQNVYVRKVK 279 K FI + G+E+EKA SS+ + + V + Sbjct: 90 KQVKFINQTRGQELEKAISSLQSKEIILVENTR 122
>RPOB_STRCO (Q9L0L0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1161 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = -1 Query: 353 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 177 ++GK K + + P + + +R + KA + L HG+ + +GV++ DR +GDE Sbjct: 788 LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 846 Query: 176 VIPGAEEV 153 + PG ++ Sbjct: 847 LPPGVNQL 854 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,265,695 Number of Sequences: 219361 Number of extensions: 1517922 Number of successful extensions: 4433 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 4295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4411 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
