>TMPS5_MOUSE (Q9ER04) Transmembrane protease, serine 5 (EC 3.4.21.-) (Spinesin)|
          Length = 455

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -2

Query: 334 DCPWDSCEEGWLPGSP*YQRHDCG*RCLSMVILNPALVLNME*PERLDQSVWVLVCHKCL 155
           +CP  SCEE  LP  P         + +S  I    L+L ++   R D   W+LVCH+  
Sbjct: 92  NCPGVSCEEELLPSLP---------KTVSFRINGEDLLLQVQVRARPD---WLLVCHEGW 139

Query: 154 DQSVWVLLC 128
             ++ + +C
Sbjct: 140 SPALGMHIC 148

>ACSA_LEPIN (Q8EYG2) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 661

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = -3

Query: 465 ERLVAQADQLGPFVTVTADVSVRGGTTLDQLIDHFLHILRFDEKIVPGILVRKAGYQGPL 286
           E L ++ D   P + VTAD   RGG  ++   +  L + +  EK+   I+VR+ G +  L
Sbjct: 175 EALQSRIDDCKPKLVVTADGGFRGGKPIELKKNVDLALEKSKEKVKTVIVVRRTGNESGL 234

>ACSA_LEPIC (Q72LY9) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 661

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = -3

Query: 465 ERLVAQADQLGPFVTVTADVSVRGGTTLDQLIDHFLHILRFDEKIVPGILVRKAGYQGPL 286
           E L ++ D   P + VTAD   RGG  ++   +  L + +  EK+   I+VR+ G +  L
Sbjct: 175 EALQSRIDDCKPKLVVTADGGFRGGKPIELKKNVDLALEKSKEKVKTVIVVRRTGNESGL 234

>ENV_BAEVM (P10269) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Outer membrane protein GP70; Transmembrane protein p20E]
          Length = 563

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 213 WSNLNALTNLSGYLCAINALTNLCG 139
           +SN  ++TN++G +CA+N    LCG
Sbjct: 304 FSNCTSITNVTGPICAVNGSVFLCG 328

>PYRF_PARBR (Q9C131) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase) (Uridine
           5'-monophosphate synthase) (UMP synthase)
          Length = 285

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = -3

Query: 468 SERLVAQADQLGPFVTV-------TADVSVRGGTTLDQLIDHFLHILRFDEKIVP-GILV 313
           S+ L+  AD+LGP++TV         D+S    T+L  L      +L  D K V  G  V
Sbjct: 44  SKELLDLADRLGPYITVLKTHIDILTDLSPTTLTSLKSLASKHRFLLFEDRKFVDIGSTV 103

Query: 312 RKAGYQGPLDIS 277
           +K  + G L IS
Sbjct: 104 QKQYHGGSLRIS 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,252,629
Number of Sequences: 219361
Number of extensions: 1820632
Number of successful extensions: 4577
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4576
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)