ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14p23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468081.1| Oryza sativa (japonica cultivar-group), mRNA 307 2e-80
2dbj|AK121954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
3dbj|AK065948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
7gb|AY552098.1| Homo sapiens phospholipase A2, group IVA (cytosol... 46 0.14
8emb|AL022147.3|HS799N4 Human DNA sequence from clone RP4-799N4 o... 46 0.14
9dbj|AB210688.1| Ciona intestinalis mRNA for Smad4, complete cds,... 44 0.55
10dbj|AK114590.1| Ciona intestinalis cDNA, clone:cieg009m10, full ... 44 0.55
11gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosom... 42 2.2
12emb|AL157706.17| Human DNA sequence from clone RP11-153L18 on ch... 42 2.2
13emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome;... 42 2.2
14gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome... 42 2.2
15dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 2.2
16ref|XM_627165.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 2.2
17gb|M26312.1|RABTCBCA3 Rabbit T-cell receptor germline beta-chain... 42 2.2
18gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, compl... 40 8.6
19emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chro... 40 8.6
20emb|AL356754.18| Human DNA sequence from clone RP11-11C5 on chro... 40 8.6
21emb|AJ318471.1|BT3318471 Bacteriophage T3 complete genome, strai... 40 8.6
22emb|AJ251805.1|BPH251805 Bacteriophage phiYeO3-12 complete genome 40 8.6
23gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, compl... 40 8.6
24gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, com... 40 8.6
25gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, com... 40 8.6
26gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Ca... 40 8.6
27gb|AC105761.5| Homo sapiens BAC clone RP11-351F21 from 2, comple... 40 8.6
28gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, com... 40 8.6
29emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 ... 40 8.6
30gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complet... 40 8.6
31emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-3... 40 8.6
32gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromoso... 40 8.6
33gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complet... 40 8.6
34dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, comp... 40 8.6 
>ref|XM_468081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3585

 Score =  307 bits (155), Expect = 2e-80
 Identities = 320/371 (86%), Gaps = 3/371 (0%)
 Strand = Plus / Minus

                                                                        
Query: 259  atctcgacctgagatgtgataaataggcgatgaagagcatctgcatcattggttgcagaa 318
            ||||| |||| |||||||||||| ||||| || |||||||| || ||||||||||| |||
Sbjct: 3078 atctccacctcagatgtgataaacaggcggtgcagagcatcagcgtcattggttgccgaa 3019

                                                                        
Query: 319  gccagctccttcagtttggataccgtatcaggattttcagcatggagataaacctttgca 378
             |||||||||| |||||||| || || | || |||||| || ||||||||||| ||||| 
Sbjct: 3018 accagctcctttagtttggacactgtgttagcattttccgcgtggagataaacttttgcc 2959

                                                                        
Query: 379  tccaaactagcgcctatcagctttcctgttctagcgctctccaaaatcttgttcacctct 438
            || || |||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 2958 tctaagctagagcctatcagctttcctgttcgagcactctccaaaattttgttcacctct 2899

                                                                        
Query: 439  gatctcaactccaggataacactcagaaaatcaacatcatccttttgaactgagcaccat 498
            ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||  ||||
Sbjct: 2898 gatctcaactcgaggataacactcagaaaatcaacatcatcctttggaaccgagagccat 2839

                                                                        
Query: 499  tcttcattcctatctggccattttagatcgaaagcaaactcggcaacagatccatcttcc 558
            ||||||||| || |||||||||||||||  ||| ||||||| |||||||||||||| |||
Sbjct: 2838 tcttcattcttaactggccattttagattaaaaacaaactcagcaacagatccatcatcc 2779

                                                                        
Query: 559  aagggtgtgttgaaaggggcaagttctgccaaatatcctctgcttaagtgtggcataatc 618
            | | ||||||||||| ||  | ||||||||| | |||||| |||  | ||||||||||| 
Sbjct: 2778 a-gtgtgtgttgaaacggt-aggttctgccatacatcctcagctaga-tgtggcataatg 2722

                       
Query: 619  ggagcaatggc 629
            || ||||||||
Sbjct: 2721 ggggcaatggc 2711
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>dbj|AK121954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M07, full
           insert sequence
          Length = 1439

 Score =  307 bits (155), Expect = 2e-80
 Identities = 320/371 (86%), Gaps = 3/371 (0%)
 Strand = Plus / Minus

                                                                       
Query: 259 atctcgacctgagatgtgataaataggcgatgaagagcatctgcatcattggttgcagaa 318
           ||||| |||| |||||||||||| ||||| || |||||||| || ||||||||||| |||
Sbjct: 932 atctccacctcagatgtgataaacaggcggtgcagagcatcagcgtcattggttgccgaa 873

                                                                       
Query: 319 gccagctccttcagtttggataccgtatcaggattttcagcatggagataaacctttgca 378
            |||||||||| |||||||| || || | || |||||| || ||||||||||| ||||| 
Sbjct: 872 accagctcctttagtttggacactgtgttagcattttccgcgtggagataaacttttgcc 813

                                                                       
Query: 379 tccaaactagcgcctatcagctttcctgttctagcgctctccaaaatcttgttcacctct 438
           || || |||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 812 tctaagctagagcctatcagctttcctgttcgagcactctccaaaattttgttcacctct 753

                                                                       
Query: 439 gatctcaactccaggataacactcagaaaatcaacatcatccttttgaactgagcaccat 498
           ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||  ||||
Sbjct: 752 gatctcaactcgaggataacactcagaaaatcaacatcatcctttggaaccgagagccat 693

                                                                       
Query: 499 tcttcattcctatctggccattttagatcgaaagcaaactcggcaacagatccatcttcc 558
           ||||||||| || |||||||||||||||  ||| ||||||| |||||||||||||| |||
Sbjct: 692 tcttcattcttaactggccattttagattaaaaacaaactcagcaacagatccatcatcc 633

                                                                       
Query: 559 aagggtgtgttgaaaggggcaagttctgccaaatatcctctgcttaagtgtggcataatc 618
           | | ||||||||||| ||  | ||||||||| | |||||| |||  | ||||||||||| 
Sbjct: 632 a-gtgtgtgttgaaacggt-aggttctgccatacatcctcagctaga-tgtggcataatg 576

                      
Query: 619 ggagcaatggc 629
           || ||||||||
Sbjct: 575 ggggcaatggc 565
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>dbj|AK065948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046B21, full
            insert sequence
          Length = 3585

 Score =  301 bits (152), Expect = 1e-78
 Identities = 311/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Minus

                                                                        
Query: 270  agatgtgataaataggcgatgaagagcatctgcatcattggttgcagaagccagctcctt 329
            |||||||||||| ||||| || |||||||| || ||||||||||| ||| ||||||||||
Sbjct: 3067 agatgtgataaacaggcggtgcagagcatcagcgtcattggttgccgaaaccagctcctt 3008

                                                                        
Query: 330  cagtttggataccgtatcaggattttcagcatggagataaacctttgcatccaaactagc 389
             |||||||| || || | || |||||| || ||||||||||| ||||| || || |||| 
Sbjct: 3007 tagtttggacactgtgttagcattttccgcgtggagataaacttttgcctctaagctaga 2948

                                                                        
Query: 390  gcctatcagctttcctgttctagcgctctccaaaatcttgttcacctctgatctcaactc 449
            |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 2947 gcctatcagctttcctgttcgagcactctccaaaattttgttcacctctgatctcaactc 2888

                                                                        
Query: 450  caggataacactcagaaaatcaacatcatccttttgaactgagcaccattcttcattcct 509
             ||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||| |
Sbjct: 2887 gaggataacactcagaaaatcaacatcatcctttggaaccgagagccattcttcattctt 2828

                                                                        
Query: 510  atctggccattttagatcgaaagcaaactcggcaacagatccatcttccaagggtgtgtt 569
            | |||||||||||||||  ||| ||||||| |||||||||||||| |||| | |||||||
Sbjct: 2827 aactggccattttagattaaaaacaaactcagcaacagatccatcatcca-gtgtgtgtt 2769

                                                                        
Query: 570  gaaaggggcaagttctgccaaatatcctctgcttaagtgtggcataatcggagcaatggc 629
            |||| ||  | ||||||||| | |||||| |||  | ||||||||||| || ||||||||
Sbjct: 2768 gaaacggt-aggttctgccatacatcctcagctaga-tgtggcataatgggggcaatggc 2711
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  174 bits (88), Expect = 2e-40
 Identities = 160/184 (86%)
 Strand = Plus / Minus

                                                                            
Query: 265      acctgagatgtgataaataggcgatgaagagcatctgcatcattggttgcagaagccagc 324
                |||| |||||||||||| ||||| || |||||||| || ||||||||||| ||| |||||
Sbjct: 32963056 acctcagatgtgataaacaggcggtgcagagcatcagcgtcattggttgccgaaaccagc 32962997

                                                                            
Query: 325      tccttcagtttggataccgtatcaggattttcagcatggagataaacctttgcatccaaa 384
                ||||| |||||||| || || | || |||||| || ||||||||||| ||||| || || 
Sbjct: 32962996 tcctttagtttggacactgtgttagcattttccgcgtggagataaacttttgcctctaag 32962937

                                                                            
Query: 385      ctagcgcctatcagctttcctgttctagcgctctccaaaatcttgttcacctctgatctc 444
                |||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 32962936 ctagagcctatcagctttcctgttcgagcactctccaaaattttgttcacctctgatctc 32962877

                    
Query: 445      aact 448
                ||||
Sbjct: 32962876 aact 32962873



 Score =  133 bits (67), Expect = 8e-28
 Identities = 154/179 (86%), Gaps = 3/179 (1%)
 Strand = Plus / Minus

                                                                            
Query: 451      aggataacactcagaaaatcaacatcatccttttgaactgagcaccattcttcattccta 510
                ||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||| ||
Sbjct: 32962530 aggataacactcagaaaatcaacatcatcctttggaaccgagagccattcttcattctta 32962471

                                                                            
Query: 511      tctggccattttagatcgaaagcaaactcggcaacagatccatcttccaagggtgtgttg 570
                 |||||||||||||||  ||| ||||||| |||||||||||||| |||| | ||||||||
Sbjct: 32962470 actggccattttagattaaaaacaaactcagcaacagatccatcatcca-gtgtgtgttg 32962412

                                                                           
Query: 571      aaaggggcaagttctgccaaatatcctctgcttaagtgtggcataatcggagcaatggc 629
                ||| ||  | ||||||||| | |||||| |||  | ||||||||||| || ||||||||
Sbjct: 32962411 aaacggt-aggttctgccatacatcctcagctaga-tgtggcataatgggggcaatggc 32962355
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1293_A01
          Length = 139121

 Score =  174 bits (88), Expect = 2e-40
 Identities = 160/184 (86%)
 Strand = Plus / Minus

                                                                        
Query: 265  acctgagatgtgataaataggcgatgaagagcatctgcatcattggttgcagaagccagc 324
            |||| |||||||||||| ||||| || |||||||| || ||||||||||| ||| |||||
Sbjct: 8996 acctcagatgtgataaacaggcggtgcagagcatcagcgtcattggttgccgaaaccagc 8937

                                                                        
Query: 325  tccttcagtttggataccgtatcaggattttcagcatggagataaacctttgcatccaaa 384
            ||||| |||||||| || || | || |||||| || ||||||||||| ||||| || || 
Sbjct: 8936 tcctttagtttggacactgtgttagcattttccgcgtggagataaacttttgcctctaag 8877

                                                                        
Query: 385  ctagcgcctatcagctttcctgttctagcgctctccaaaatcttgttcacctctgatctc 444
            |||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 8876 ctagagcctatcagctttcctgttcgagcactctccaaaattttgttcacctctgatctc 8817

                
Query: 445  aact 448
            ||||
Sbjct: 8816 aact 8813



 Score =  133 bits (67), Expect = 8e-28
 Identities = 154/179 (86%), Gaps = 3/179 (1%)
 Strand = Plus / Minus

                                                                        
Query: 451  aggataacactcagaaaatcaacatcatccttttgaactgagcaccattcttcattccta 510
            ||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||| ||
Sbjct: 8470 aggataacactcagaaaatcaacatcatcctttggaaccgagagccattcttcattctta 8411

                                                                        
Query: 511  tctggccattttagatcgaaagcaaactcggcaacagatccatcttccaagggtgtgttg 570
             |||||||||||||||  ||| ||||||| |||||||||||||| |||| | ||||||||
Sbjct: 8410 actggccattttagattaaaaacaaactcagcaacagatccatcatcca-gtgtgtgttg 8352

                                                                       
Query: 571  aaaggggcaagttctgccaaatatcctctgcttaagtgtggcataatcggagcaatggc 629
            ||| ||  | ||||||||| | |||||| |||  | ||||||||||| || ||||||||
Sbjct: 8351 aaacggt-aggttctgccatacatcctcagctaga-tgtggcataatgggggcaatggc 8295
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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1534_E09
          Length = 126209

 Score =  174 bits (88), Expect = 2e-40
 Identities = 160/184 (86%)
 Strand = Plus / Minus

                                                                          
Query: 265    acctgagatgtgataaataggcgatgaagagcatctgcatcattggttgcagaagccagc 324
              |||| |||||||||||| ||||| || |||||||| || ||||||||||| ||| |||||
Sbjct: 117797 acctcagatgtgataaacaggcggtgcagagcatcagcgtcattggttgccgaaaccagc 117738

                                                                          
Query: 325    tccttcagtttggataccgtatcaggattttcagcatggagataaacctttgcatccaaa 384
              ||||| |||||||| || || | || |||||| || ||||||||||| ||||| || || 
Sbjct: 117737 tcctttagtttggacactgtgttagcattttccgcgtggagataaacttttgcctctaag 117678

                                                                          
Query: 385    ctagcgcctatcagctttcctgttctagcgctctccaaaatcttgttcacctctgatctc 444
              |||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 117677 ctagagcctatcagctttcctgttcgagcactctccaaaattttgttcacctctgatctc 117618

                  
Query: 445    aact 448
              ||||
Sbjct: 117617 aact 117614



 Score =  133 bits (67), Expect = 8e-28
 Identities = 154/179 (86%), Gaps = 3/179 (1%)
 Strand = Plus / Minus

                                                                          
Query: 451    aggataacactcagaaaatcaacatcatccttttgaactgagcaccattcttcattccta 510
              ||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||| ||
Sbjct: 117271 aggataacactcagaaaatcaacatcatcctttggaaccgagagccattcttcattctta 117212

                                                                          
Query: 511    tctggccattttagatcgaaagcaaactcggcaacagatccatcttccaagggtgtgttg 570
               |||||||||||||||  ||| ||||||| |||||||||||||| |||| | ||||||||
Sbjct: 117211 actggccattttagattaaaaacaaactcagcaacagatccatcatcca-gtgtgtgttg 117153

                                                                         
Query: 571    aaaggggcaagttctgccaaatatcctctgcttaagtgtggcataatcggagcaatggc 629
              ||| ||  | ||||||||| | |||||| |||  | ||||||||||| || ||||||||
Sbjct: 117152 aaacggt-aggttctgccatacatcctcagctaga-tgtggcataatgggggcaatggc 117096
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>gb|AY552098.1| Homo sapiens phospholipase A2, group IVA (cytosolic, calcium-dependent)
             (PLA2G4A) gene, complete cds
          Length = 163504

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 98    taaaaatcttctcttctattttg 120
             |||||||||||||||||||||||
Sbjct: 36028 taaaaatcttctcttctattttg 36050
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>emb|AL022147.3|HS799N4 Human DNA sequence from clone RP4-799N4 on chromosome 1q31 Contains the
             5' end of the PLA2G4A gene for phospholipase A2 group IVA
             (cytosolic, calcium dependent), complete sequence
          Length = 114638

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 98    taaaaatcttctcttctattttg 120
             |||||||||||||||||||||||
Sbjct: 48600 taaaaatcttctcttctattttg 48622
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>dbj|AB210688.1| Ciona intestinalis mRNA for Smad4, complete cds, clone: cieg094d17
          Length = 3171

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 105  cttctcttctattttgttcagt 126
            ||||||||||||||||||||||
Sbjct: 1991 cttctcttctattttgttcagt 2012
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>dbj|AK114590.1| Ciona intestinalis cDNA, clone:cieg009m10, full insert sequence
          Length = 1571

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 105 cttctcttctattttgttcagt 126
           ||||||||||||||||||||||
Sbjct: 405 cttctcttctattttgttcagt 426
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>gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosome 9, complete sequence
          Length = 192991

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   ttctcttctattttgttcagt 126
             |||||||||||||||||||||
Sbjct: 13422 ttctcttctattttgttcagt 13402
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>emb|AL157706.17| Human DNA sequence from clone RP11-153L18 on chromosome 10 Contains a
             gene for a novel protein (MGC11034) and a CpG island,
             complete sequence
          Length = 118616

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 457   acactcagaaaatcaacatca 477
             |||||||||||||||||||||
Sbjct: 71252 acactcagaaaatcaacatca 71272
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>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7
          Length = 349746

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    gggatgggagaatctcgacct 268
              |||||||||||||||||||||
Sbjct: 233709 gggatgggagaatctcgacct 233729
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>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence
          Length = 203706

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 106    ttctcttctattttgttcagt 126
              |||||||||||||||||||||
Sbjct: 122681 ttctcttctattttgttcagt 122661
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 294     agcatctgcatcattggttgc 314
               |||||||||||||||||||||
Sbjct: 3244016 agcatctgcatcattggttgc 3243996
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>ref|XM_627165.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_2650),
            partial mRNA
          Length = 10467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 8    cagaaactccaattactacaa 28
            |||||||||||||||||||||
Sbjct: 7859 cagaaactccaattactacaa 7879
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>gb|M26312.1|RABTCBCA3 Rabbit T-cell receptor germline beta-chain gene C-region 2
           (C-beta-2), complete cds
          Length = 4550

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 321 cagctccttcagtttggatac 341
           |||||||||||||||||||||
Sbjct: 411 cagctccttcagtttggatac 431
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>gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, complete sequence
          Length = 229752

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    cttctcttctattttgttcagtat 128
              |||||||| |||||||||||||||
Sbjct: 139363 cttctcttttattttgttcagtat 139340
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>emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chromosome X Contains a
              likely ortholog of mouse hepatoma-derived growth factor
              related protein 3 pseudogene (HDGFRP3), a novel protein
              similar to PAGE-5 protein (LOC203569), a novel protein
              similar to PAGE-5 protein (LOC139795), gene FLJ20434, a
              cytochrome c oxidase I (MTCO1) pseudogene, a G antigen,
              family D pseudogene and a CpG island, complete sequence
          Length = 130005

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aaatcttctcttctattttg 120
              ||||||||||||||||||||
Sbjct: 109476 aaatcttctcttctattttg 109457
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>emb|AL356754.18| Human DNA sequence from clone RP11-11C5 on chromosome 13 Contains a 60S
             ribosomal protein L21 (RPL21) pseudogene and the 3' end of
             a novel gene, complete sequence
          Length = 169888

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ttcaaaaccaggtttcagat 92
             ||||||||||||||||||||
Sbjct: 14985 ttcaaaaccaggtttcagat 15004
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>emb|AJ318471.1|BT3318471 Bacteriophage T3 complete genome, strain Luria
          Length = 38208

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   cacctacaatcttcacaatg 191
             ||||||||||||||||||||
Sbjct: 23865 cacctacaatcttcacaatg 23846
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>emb|AJ251805.1|BPH251805 Bacteriophage phiYeO3-12 complete genome
          Length = 39600

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   cacctacaatcttcacaatg 191
             ||||||||||||||||||||
Sbjct: 24631 cacctacaatcttcacaatg 24612
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>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    aaatcttctcttctattttg 120
              ||||||||||||||||||||
Sbjct: 171233 aaatcttctcttctattttg 171252
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>gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, complete sequence
          Length = 194188

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   atcttctcttctattttgtt 122
             ||||||||||||||||||||
Sbjct: 72097 atcttctcttctattttgtt 72078
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>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence
          Length = 170255

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    ttgctgaactttcccatgta 218
              ||||||||||||||||||||
Sbjct: 110441 ttgctgaactttcccatgta 110422
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>gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183354

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     ccctaaaaatcttctcttct 114
              ||||||||||||||||||||
Sbjct: 153076 ccctaaaaatcttctcttct 153095
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>gb|AC105761.5| Homo sapiens BAC clone RP11-351F21 from 2, complete sequence
          Length = 84834

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   aaaatcttctcttctatttt 119
             ||||||||||||||||||||
Sbjct: 48103 aaaatcttctcttctatttt 48122
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>gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, complete sequence
          Length = 180684

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   aaatcttctcttctattttg 120
             ||||||||||||||||||||
Sbjct: 27120 aaatcttctcttctattttg 27139
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>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8,
              complete sequence
          Length = 234864

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    ctttctttgtggaacaaaaa 159
              ||||||||||||||||||||
Sbjct: 201903 ctttctttgtggaacaaaaa 201884
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>gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   attgctgaactttcccatgt 217
             ||||||||||||||||||||
Sbjct: 10855 attgctgaactttcccatgt 10874
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>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174933

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    cctaaaaatcttctcttctatttt 119
             ||||||||||||||| ||||||||
Sbjct: 61052 cctaaaaatcttctcctctatttt 61075
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>gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromosome ul, complete
             sequence
          Length = 105327

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acacacctgatgtggtttct 240
             ||||||||||||||||||||
Sbjct: 50412 acacacctgatgtggtttct 50431
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>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence
          Length = 188083

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   acaatgaagtggattgctga 205
             ||||||||||||||||||||
Sbjct: 76808 acaatgaagtggattgctga 76789
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>dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence
          Length = 38211

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 99   aaaaatcttctcttctattttgtt 122
            ||||||||||||| ||||||||||
Sbjct: 3585 aaaaatcttctctactattttgtt 3608


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,641,144
Number of Sequences: 3902068
Number of extensions: 6641144
Number of successful extensions: 119464
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119332
Number of HSP's gapped (non-prelim): 132
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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