ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14p17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KSG3_ARATH (P43289) Shaggy-related protein kinase gamma (EC 2.7.... 37 1e-04
2KSG1_ARATH (P43288) Shaggy-related protein kinase alpha (EC 2.7.... 35 3e-04
3MSK1_MEDSA (P51137) Glycogen synthase kinase-3 homolog MsK-1 (EC... 34 7e-04
4MSK2_MEDSA (P51138) Glycogen synthase kinase-3 homolog MsK-2 (EC... 32 0.004
5MSK3_MEDSA (P51139) Glycogen synthase kinase-3 homolog MsK-3 (EC... 31 0.006
6MSK1_TOBAC (Q40518) Shaggy-related protein kinase NtK-1 (EC 2.7.... 28 0.071
7KSG10_ARATH (Q39019) Shaggy-related protein kinase kappa (EC 2.7... 30 0.091
8KSG5_ARATH (Q8VZD5) Shaggy-related protein kinase epsilon (EC 2.... 30 0.091
9KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.... 29 0.19
10CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel al... 33 0.58
11YDEE_SCHPO (Q10447) Hypothetical protein C12B10.14c in chromosome I 32 1.3
12YDYD_SCHPO (O13692) Hypothetical protein C11E3.13c precursor 31 2.9
13CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel al... 30 6.5
14ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC ... 30 6.5
15KSG9_ARATH (Q39012) Shaggy-related protein kinase iota (EC 2.7.1... 25 6.5
16ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC ... 30 8.4

>KSG3_ARATH (P43289) Shaggy-related protein kinase gamma (EC 2.7.11.1)|
           (ASK-gamma)
          Length = 409

 Score = 36.6 bits (83), Expect(2) = 1e-04
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQ 559
           KG+PV++ AKL+PEHARKQ
Sbjct: 385 KGVPVEMVAKLVPEHARKQ 403



 Score = 28.5 bits (62), Expect(2) = 1e-04
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GRFLPPLFNFK
Sbjct: 370 GRFLPPLFNFK 380



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>KSG1_ARATH (P43288) Shaggy-related protein kinase alpha (EC 2.7.11.1)|
           (ASK-alpha)
          Length = 405

 Score = 35.4 bits (80), Expect(2) = 3e-04
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQ 559
           KG+P+++ AKL+PEHARKQ
Sbjct: 381 KGVPLEMVAKLVPEHARKQ 399



 Score = 28.5 bits (62), Expect(2) = 3e-04
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GRFLPPLFNFK
Sbjct: 366 GRFLPPLFNFK 376



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>MSK1_MEDSA (P51137) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1)|
          Length = 411

 Score = 33.9 bits (76), Expect(2) = 7e-04
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQ 559
           KG+PV+   KL+PEHARKQ
Sbjct: 387 KGVPVETLMKLVPEHARKQ 405



 Score = 28.5 bits (62), Expect(2) = 7e-04
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GRFLPPLFNFK
Sbjct: 372 GRFLPPLFNFK 382



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>MSK2_MEDSA (P51138) Glycogen synthase kinase-3 homolog MsK-2 (EC 2.7.11.1)|
          Length = 411

 Score = 32.3 bits (72), Expect(2) = 0.004
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQSS 553
           KG+P ++  KL+P HARKQ S
Sbjct: 386 KGVPAEMLVKLVPSHARKQCS 406



 Score = 27.3 bits (59), Expect(2) = 0.004
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -1

Query: 662 GRFLPPLFNFKA 627
           GR LPPLFNFKA
Sbjct: 371 GRHLPPLFNFKA 382



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>MSK3_MEDSA (P51139) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1)|
          Length = 411

 Score = 30.8 bits (68), Expect(2) = 0.006
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQ 559
           KG+P ++  KL+P HARKQ
Sbjct: 386 KGVPAEMLVKLVPPHARKQ 404



 Score = 28.5 bits (62), Expect(2) = 0.006
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GRFLPPLFNFK
Sbjct: 371 GRFLPPLFNFK 381



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>MSK1_TOBAC (Q40518) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1)|
          Length = 409

 Score = 28.1 bits (61), Expect(2) = 0.071
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQ 559
           KG+  +   KL+PEHARKQ
Sbjct: 385 KGVSAENLLKLVPEHARKQ 403



 Score = 27.3 bits (59), Expect(2) = 0.071
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -1

Query: 662 GRFLPPLFNFKA 627
           GR LPPLFNFKA
Sbjct: 370 GRVLPPLFNFKA 381



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>KSG10_ARATH (Q39019) Shaggy-related protein kinase kappa (EC 2.7.11.1)|
           (ASK-kappa) (AtK-1)
          Length = 421

 Score = 30.4 bits (67), Expect(2) = 0.091
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -3

Query: 612 GIPVDVAAKLIPEHARKQS 556
           GIP ++  +L+PEHARKQ+
Sbjct: 396 GIPPEIVNRLVPEHARKQN 414



 Score = 24.6 bits (52), Expect(2) = 0.091
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GR LPPLFNFK
Sbjct: 380 GRPLPPLFNFK 390



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>KSG5_ARATH (Q8VZD5) Shaggy-related protein kinase epsilon (EC 2.7.11.1)|
           (ASK-epsilon)
          Length = 410

 Score = 29.6 bits (65), Expect(2) = 0.091
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -3

Query: 615 KGIPVDVAAKLIPEHARKQSS 553
           KG  +++ +KLIP+HARKQ S
Sbjct: 386 KGASLELLSKLIPDHARKQCS 406



 Score = 25.4 bits (54), Expect(2) = 0.091
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GR LPPLFNFK
Sbjct: 371 GRALPPLFNFK 381



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>KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.11.1)|
           (ASK-delta)
          Length = 420

 Score = 29.3 bits (64), Expect(2) = 0.19
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 612 GIPVDVAAKLIPEHARKQS 556
           GIP +   +L+PEHARKQ+
Sbjct: 395 GIPPETVDRLVPEHARKQN 413



 Score = 24.6 bits (52), Expect(2) = 0.19
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GR LPPLFNFK
Sbjct: 379 GRPLPPLFNFK 389



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>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.3)
           (CHCACHA1D)
          Length = 2190

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 424 SRLPTAIGSSSGSHAAQPTSPGEMLTCRCNSNESDTGIS*SCMGALLSRVLRDQFCRN-I 600
           SRL +  G SS  HA+ PTS  E +      N S  G + +C G+L   + + +F R   
Sbjct: 472 SRL-SCFGRSSNKHASMPTSETESVN---TENVSGEGENPACCGSLCQTISKSKFSRRWR 527

Query: 601 HWDSFSVR 624
            W+ F+ R
Sbjct: 528 RWNRFNRR 535



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>YDEE_SCHPO (Q10447) Hypothetical protein C12B10.14c in chromosome I|
          Length = 665

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/81 (27%), Positives = 36/81 (44%)
 Frame = +1

Query: 379 LTTQLHRSTGWSGHTSRLPTAIGSSSGSHAAQPTSPGEMLTCRCNSNESDTGIS*SCMGA 558
           L   L++S  ++   S LPT + S + S    PT+P E+ T R +S+ S           
Sbjct: 166 LPIHLYKSYSYNHSPSSLPTVLNSQALSSPPVPTTPDEVSTNRLSSSTSSMN-------- 217

Query: 559 LLSRVLRDQFCRNIHWDSFSV 621
                     CRN+  D+F++
Sbjct: 218 ----------CRNLVPDNFNI 228



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>YDYD_SCHPO (O13692) Hypothetical protein C11E3.13c precursor|
          Length = 510

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
 Frame = +1

Query: 154 QQVAFN---NRNLEQGGTSLTIKKLGKSRGPIQGSTTINTFILL*NILQIS-YGNLNSQA 321
           Q + FN   N+      T+L       S GP   STTINT I+   I Q S  G+ +  +
Sbjct: 382 QPLGFNAPSNQEFSANATALV------SPGPHSVSTTINTNIVQATISQSSTSGSSSGSS 435

Query: 322 RVSTREGEPVTWS----SLHRSILTTQLHRSTGWSGHTSRLPTAIGSSSGSHAA 471
             ST        S    S   S ++T    ++G S H+S      GSSSGS +A
Sbjct: 436 SASTTASSSSVSSGSSISSGSSSMSTSYTSASGSSAHSS------GSSSGSSSA 483



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>CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel alpha-1F subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1985

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +1

Query: 367 HRSILTTQLHRSTG---WSGHTSRLPTAIGSSSGSHAAQPTSPGEMLTCRCNSNESDTGI 537
           HR  L+   +R  G   W  H++R       S+ SHA+ P S    +T      + + G 
Sbjct: 436 HRPQLSELTNRRRGRLRWFSHSTRST----HSTSSHASLPASDTGSMTDTPGDEDEEEGT 491

Query: 538 S*SCMGALLSRVLRDQFCRN 597
             SC    L+++++ + CR+
Sbjct: 492 MASCT-RCLNKIMKTRICRH 510



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>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)|
           (Trithorax-homolog protein 5) (TRX-homolog protein 5)
           (Protein SET DOMAIN GROUP 29)
          Length = 1043

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 251 VDPCMGPLDFPSFLIVRLVPPCSRFLLLKATCCYCSTICGWLLLSRL-LQLEMNCV 87
           ++P +G L  PS   V++   C +       CC CST    +  SR   ++E++C+
Sbjct: 703 MEPALGILSIPSSNFVKICVICKQIHGSCTQCCKCSTYYHAMCASRAGYRMELHCL 758



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>KSG9_ARATH (Q39012) Shaggy-related protein kinase iota (EC 2.7.11.1)|
           (ASK-iota)
          Length = 407

 Score = 24.6 bits (52), Expect(2) = 6.5
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 662 GRFLPPLFNFK 630
           GR LPPLFNFK
Sbjct: 367 GRPLPPLFNFK 377



 Score = 23.9 bits (50), Expect(2) = 6.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 612 GIPVDVAAKLIPEHARKQSS 553
           G  +++  +LIPEH R+Q S
Sbjct: 382 GASMELINRLIPEHVRRQMS 401



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>ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43)|
           (Trithorax-homolog protein 4) (TRX-homolog protein 4)
           (Trithorax 4) (Protein SET DOMAIN GROUP 16)
          Length = 990

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 251 VDPCMGPLDFPSFLIVRLVPPCSRFLLLKATCCYCSTICGWLLLSRL-LQLEMNCV 87
           ++P +G L  PS   V++   C +       CC CST    +  SR   ++E++C+
Sbjct: 651 MEPAVGILSIPSTNFVKICVICKQIHGSCTQCCKCSTYYHAMCASRAGYRMELHCL 706


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,825,739
Number of Sequences: 219361
Number of extensions: 1637491
Number of successful extensions: 4439
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4438
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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