| Clone Name | rbags14p16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736120.1| Triticum aestivum 20S proteasome beta 7 subunit mRNA, complete cds Length = 694 Score = 664 bits (335), Expect = 0.0 Identities = 374/387 (96%) Strand = Plus / Minus Query: 101 taccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggtc 160 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 688 taccatgttcctacagcacccttggatgggttctcaaaggcggcaaacccccagttggtc 629 Query: 161 ttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatctggaat 220 |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 628 ttcagggcatacggcgggtagatggttgatccctcggttgtgatcttggcaatctggaat 569 Query: 221 ttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaatgagctta 280 |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 568 ttgttgatggatgaccggtcacggtacagcaggaccagcaagcacttctcaatcagctta 509 Query: 281 acagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggattgccata 340 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 508 acagcttcttcaaaagtcatgtcctcgcgccattcaccacgaagtattgggattgccata 449 Query: 341 tggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcatgttaacc 400 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 448 tggttcccaaatccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaacc 389 Query: 401 atgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccagggag 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 atgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccagggag 329 Query: 461 ttccatagagggtcaaacttattgcgc 487 ||||||||||||||||||||||||||| Sbjct: 328 ttccatagagggtcaaacttattgcgc 302 Score = 210 bits (106), Expect = 4e-51 Identities = 109/110 (99%) Strand = Plus / Minus Query: 572 gttaattcatccagatagcgcaaaatctcctggaaatcactgaactccccactccctcca 631 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gttaattcatccagataccgcaaaatctcctggaaatcactgaactccccactccctcca 242 Query: 632 ataaggctatgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ataaggctatgctttccaacctccttgatacgctccacactcttgtatcg 192
>dbj|AK104212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D09, full insert sequence Length = 1005 Score = 630 bits (318), Expect = e-177 Identities = 516/582 (88%) Strand = Plus / Minus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 789 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 730 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatctggaa 219 ||||| | || || ||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 729 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctggaa 670 Query: 220 tttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaatgagctt 279 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 cttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagctt 610 Query: 280 aacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggattgccat 339 |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 609 gacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgccat 550 Query: 340 atggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcatgttaac 399 |||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 549 atggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaac 490 Query: 400 catgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccaggga 459 |||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||||| Sbjct: 489 catgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggga 430 Query: 460 gttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggcatg 519 |||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| ||| Sbjct: 429 gttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctatg 370 Query: 520 gatttccttggggcccaatgagttcccatcatcccacatatgatcgttcaaagttaattc 579 || |||||||| ||||| ||||| ||||||||||||||||||||| || |||||||| Sbjct: 369 gacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaattc 310 Query: 580 atccagatagcgcaaaatctcctggaaatcactgaactccccactccctccaataaggct 639 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 309 atccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctccaataaggct 250 Query: 640 atgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 249 atgcttaccaacagccttaatgcgctccacgctcttgtatcg 208
>dbj|AK103975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F06, full insert sequence Length = 985 Score = 630 bits (318), Expect = e-177 Identities = 516/582 (88%) Strand = Plus / Minus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 856 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 797 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatctggaa 219 ||||| | || || ||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 796 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctggaa 737 Query: 220 tttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaatgagctt 279 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 736 cttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagctt 677 Query: 280 aacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggattgccat 339 |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 676 gacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgccat 617 Query: 340 atggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcatgttaac 399 |||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 616 atggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaac 557 Query: 400 catgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccaggga 459 |||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||||| Sbjct: 556 catgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggga 497 Query: 460 gttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggcatg 519 |||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| ||| Sbjct: 496 gttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctatg 437 Query: 520 gatttccttggggcccaatgagttcccatcatcccacatatgatcgttcaaagttaattc 579 || |||||||| ||||| ||||| ||||||||||||||||||||| || |||||||| Sbjct: 436 gacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaattc 377 Query: 580 atccagatagcgcaaaatctcctggaaatcactgaactccccactccctccaataaggct 639 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 376 atccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctccaataaggct 317 Query: 640 atgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 316 atgcttaccaacagccttaatgcgctccacgctcttgtatcg 275
>dbj|AK071380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091G01, full insert sequence Length = 1090 Score = 630 bits (318), Expect = e-177 Identities = 516/582 (88%) Strand = Plus / Minus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 874 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 815 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatctggaa 219 ||||| | || || ||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 814 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctggaa 755 Query: 220 tttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaatgagctt 279 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 754 cttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagctt 695 Query: 280 aacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggattgccat 339 |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 694 gacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgccat 635 Query: 340 atggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcatgttaac 399 |||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 634 atggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaac 575 Query: 400 catgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccaggga 459 |||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||||| Sbjct: 574 catgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggga 515 Query: 460 gttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggcatg 519 |||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| ||| Sbjct: 514 gttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctatg 455 Query: 520 gatttccttggggcccaatgagttcccatcatcccacatatgatcgttcaaagttaattc 579 || |||||||| ||||| ||||| ||||||||||||||||||||| || |||||||| Sbjct: 454 gacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaattc 395 Query: 580 atccagatagcgcaaaatctcctggaaatcactgaactccccactccctccaataaggct 639 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 394 atccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctccaataaggct 335 Query: 640 atgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 334 atgcttaccaacagccttaatgcgctccacgctcttgtatcg 293
>dbj|AB026568.1| Oryza sativa (japonica cultivar-group) OsPBG1 mRNA for beta 7 subunit of 20S proteasome, complete cds Length = 1118 Score = 622 bits (314), Expect = e-175 Identities = 515/582 (88%) Strand = Plus / Minus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 875 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 816 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatctggaa 219 ||||| | || || ||||||||||||| |||||| || |||||||||||||||||||| Sbjct: 815 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctggaa 756 Query: 220 tttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaatgagctt 279 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 755 cttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagctt 696 Query: 280 aacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggattgccat 339 |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 695 gacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgccat 636 Query: 340 atggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcatgttaac 399 |||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 635 atggttcccaaacccagtggcaatgtggttttcctcaaaatgtgtaccaatcatgttaac 576 Query: 400 catgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccaggga 459 |||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||||| Sbjct: 575 catgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggga 516 Query: 460 gttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggcatg 519 |||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| ||| Sbjct: 515 gttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctatg 456 Query: 520 gatttccttggggcccaatgagttcccatcatcccacatatgatcgttcaaagttaattc 579 || |||||||| ||||| ||||| ||||||||||||||||||||| || |||||||| Sbjct: 455 gacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaattc 396 Query: 580 atccagatagcgcaaaatctcctggaaatcactgaactccccactccctccaataaggct 639 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 395 atccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctccaataaggct 336 Query: 640 atgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 335 atgcttaccaacagccttaatgcgctccacgctcttgtatcg 294
>gb|BT018203.1| Zea mays clone EL01N0560A08.c mRNA sequence Length = 946 Score = 460 bits (232), Expect = e-126 Identities = 457/532 (85%) Strand = Plus / Minus Query: 149 ccccagttggtcttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttg 208 ||||||| |||||||| || ||| || ||||||||||| ||||| || | ||||||||| Sbjct: 843 ccccagtaggtcttcaaggaatatggggggtagatggttgatccttcccttgtgatcttg 784 Query: 209 gcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttc 268 |||||||||||||||||||||||||||| ||| |||||||||| ||| | |||||||||| Sbjct: 783 gcaatctggaatttgttgatagatgatctgtctcggtacagcaagaccaccaagcacttc 724 Query: 269 tcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggatt 328 |||| |||||||||||||||||||||||||| ||||| ||||||||| |||| || || Sbjct: 723 tcaaccagcttaacagcttcttcaaaagtcatatcctcgcgccattcagcacggagtatc 664 Query: 329 gggattgccatatggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtacca 388 |||||||||||||| || ||||||||||| || | || || ||||| ||||| |||||| Sbjct: 663 gggattgccatatgatttccaaatccagtagcgacatggttttcctcgaagtgggtacca 604 Query: 389 atcatgttaaccatgccaagatacttctcatcgccctttgggccctttttcactccacca 448 |||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 603 atcatgttaaccatcccaagatacttctcatcaccctttggaccctttttcaccccacca 544 Query: 449 agcaccagggagttccatagagggtcaaacttattgcgcctgttgtacattactcttgtc 508 || || || |||||||| ||||| |||||||| ||||||| ||||||||| ||||||||| Sbjct: 543 agtacaagtgagttccagagaggatcaaacttgttgcgccggttgtacatcactcttgtc 484 Query: 509 aggtaggcatggatttccttggggcccaatgagttcccatcatcccacatatgatcgttc 568 | ||| ||||| || |||||||||| ||||| |||||||||||||||||||| | Sbjct: 483 aaatagctgtggatctctttggggcccagcgagtttccatcatcccacatatgatcagac 424 Query: 569 aaagttaattcatccagatagcgcaaaatctcctggaaatcactgaactccccactccct 628 | ||||| |||||||| ||||||||||||||||||||| ||||||||||| || || || Sbjct: 423 agagttagttcatccaaatagcgcaaaatctcctggaagtcactgaactctccgcttgct 364 Query: 629 ccaataaggctatgctttccaacctccttgatacgctccacactcttgtatc 680 ||||| | ||||||||| ||||| |||| || | |||||||||||||||| Sbjct: 363 ccaatgatgctatgcttgccaactgccttaatgagttccacactcttgtatc 312
>gb|AY104193.1| Zea mays PCO143176 mRNA sequence Length = 1187 Score = 446 bits (225), Expect = e-122 Identities = 492/581 (84%) Strand = Plus / Minus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| ||| ||||| |||| || ||||| |||||| || || ||||||| ||| Sbjct: 994 ctaccatgatcccacagcgccctgggctgggttttcaaagtgagagaagccccagtaggt 935 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatctggaa 219 ||||| || ||| |||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 934 cttcaaggaatatggtgggtagatggttgatccttcagttgtgatcttggcaatctggaa 875 Query: 220 tttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaatgagctt 279 ||||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 874 tttgttgatagatgacctgtcacggtacagcaagaccagcaagcacttctcaaccagctt 815 Query: 280 aacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggattgccat 339 ||||||||||||||||||||| ||||| ||||||||| |||| || || ||||| |||| Sbjct: 814 aacagcttcttcaaaagtcatatcctcgcgccattcagcacggagtatcgggatcgccag 755 Query: 340 atggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcatgttaac 399 ||| || |||||||||| || | || || ||||| ||||| ||||||||||| ||||| Sbjct: 754 atgatttgcaaatccagttgcgacatggttttcctcgaagtgggtaccaatcatattaac 695 Query: 400 catgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccaggga 459 ||||||||||||||||||||| |||||||| |||||||||||||||||||| || || || Sbjct: 694 catgccaagatacttctcatcaccctttggaccctttttcactccaccaagtacaagtga 635 Query: 460 gttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggcatg 519 |||||| ||||| |||||||| ||||| ||||||||||| |||||||||| || || Sbjct: 634 gttccagagaggatcaaacttgttgcgtctgttgtacatcactcttgtcaaataactgtg 575 Query: 520 gatttccttggggcccaatgagttcccatcatcccacatatgatcgttcaaagttaattc 579 ||| || |||||||||| || || |||||||||||||||||||| | ||||| ||| Sbjct: 574 gatctctttggggcccagagaatttccatcatcccacatatgatcagaaagagttagttc 515 Query: 580 atccagatagcgcaaaatctcctggaaatcactgaactccccactccctccaataaggct 639 |||||||||||||| |||||||||||||| |||||||| || || ||||||| | ||| Sbjct: 514 atccagatagcgcaggatctcctggaaatcgctgaactctccgcttgctccaatgatgct 455 Query: 640 atgctttccaacctccttgatacgctccacactcttgtatc 680 |||||| ||||| |||| || || |||||||||||||||| Sbjct: 454 atgcttgccaacagccttaatgcgttccacactcttgtatc 414
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 260 bits (131), Expect = 5e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 214 ctggaatttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaat 273 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99589 ctggaacttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaac 99648 Query: 274 gagcttaacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggat 333 ||||| |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||| Sbjct: 99649 aagcttgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggat 99708 Query: 334 tgccatatggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcat 393 |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 99709 tgccatatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcat 99768 Query: 394 gttaacc 400 ||||||| Sbjct: 99769 gttaacc 99775 Score = 167 bits (84), Expect = 6e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 398 accatgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccagg 457 |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||| Sbjct: 99861 accatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaagg 99920 Query: 458 gagttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggca 517 |||||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| | Sbjct: 99921 gagttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagcta 99980 Query: 518 tggatttccttggggcccaatgagttcccatcatcccacatatgatcg 565 |||| |||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 99981 tggacctccttgggacccaaggagtttccatcatcccacatatgatcg 100028 Score = 147 bits (74), Expect = 6e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 572 gttaattcatccagatagcgcaaaatctcctggaaatcactgaactccccactccctcca 631 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 100121 gttaattcatccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctcca 100180 Query: 632 ataaggctatgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||||||||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 100181 ataaggctatgcttaccaacagccttaatgcgctccacgctcttgtatcg 100230 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 99378 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 99437 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatct 215 ||||| | || || ||||||||||||| |||||| || |||||||||||||||| Sbjct: 99438 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatct 99493
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 260 bits (131), Expect = 5e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 214 ctggaatttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaat 273 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19772322 ctggaacttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaac 19772381 Query: 274 gagcttaacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggat 333 ||||| |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||| Sbjct: 19772382 aagcttgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggat 19772441 Query: 334 tgccatatggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcat 393 |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 19772442 tgccatatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcat 19772501 Query: 394 gttaacc 400 ||||||| Sbjct: 19772502 gttaacc 19772508 Score = 167 bits (84), Expect = 6e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 398 accatgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccagg 457 |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||| Sbjct: 19772594 accatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaagg 19772653 Query: 458 gagttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggca 517 |||||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| | Sbjct: 19772654 gagttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagcta 19772713 Query: 518 tggatttccttggggcccaatgagttcccatcatcccacatatgatcg 565 |||| |||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 19772714 tggacctccttgggacccaaggagtttccatcatcccacatatgatcg 19772761 Score = 147 bits (74), Expect = 6e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 572 gttaattcatccagatagcgcaaaatctcctggaaatcactgaactccccactccctcca 631 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19772854 gttaattcatccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctcca 19772913 Query: 632 ataaggctatgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||||||||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 19772914 ataaggctatgcttaccaacagccttaatgcgctccacgctcttgtatcg 19772963 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 19772111 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 19772170 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatct 215 ||||| | || || ||||||||||||| |||||| || |||||||||||||||| Sbjct: 19772171 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatct 19772226
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 260 bits (131), Expect = 5e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 214 ctggaatttgttgatagatgatcggtcacggtacagcaggacaagcaagcacttctcaat 273 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118008 ctggaacttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaac 118067 Query: 274 gagcttaacagcttcttcaaaagtcatgtcctcacgccattcaccacgaaggattgggat 333 ||||| |||||||| ||||| ||||||||||| ||||||||| |||||| |||||||| Sbjct: 118068 aagcttgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggat 118127 Query: 334 tgccatatggttcccaaatccagtggcaatgtgattctcctcaaagtgtgtaccaatcat 393 |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 118128 tgccatatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcat 118187 Query: 394 gttaacc 400 ||||||| Sbjct: 118188 gttaacc 118194 Score = 167 bits (84), Expect = 6e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 398 accatgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccagg 457 |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| || ||| Sbjct: 118280 accatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaagg 118339 Query: 458 gagttccatagagggtcaaacttattgcgcctgttgtacattactcttgtcaggtaggca 517 |||||||| || || |||||||| ||||||||||||||||| ||||| ||||||||| | Sbjct: 118340 gagttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagcta 118399 Query: 518 tggatttccttggggcccaatgagttcccatcatcccacatatgatcg 565 |||| |||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 118400 tggacctccttgggacccaaggagtttccatcatcccacatatgatcg 118447 Score = 147 bits (74), Expect = 6e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 572 gttaattcatccagatagcgcaaaatctcctggaaatcactgaactccccactccctcca 631 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118540 gttaattcatccaaatagcgcaaaatctcctggaaatcactgaactccccacttgctcca 118599 Query: 632 ataaggctatgctttccaacctccttgatacgctccacactcttgtatcg 681 |||||||||||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 118600 ataaggctatgcttaccaacagccttaatgcgctccacgctcttgtatcg 118649 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 100 ctaccatgttcctacagcacccttggacgggttctcaaaggcagcaaacccccagttggt 159 |||||||| |||||||||||||| || ||| || ||||||||||| || ||||||| || Sbjct: 117797 ctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaagt 117856 Query: 160 cttcagggcatacggtgggtagatggtcgatccctcggtcgtgatcttggcaatct 215 ||||| | || || ||||||||||||| |||||| || |||||||||||||||| Sbjct: 117857 cttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatct 117912
>gb|BC047415.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone IMAGE:5269578), partial cds Length = 2578 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1182 tgaaactgtttcagcagcacagtt 1205
>ref|NM_018272.2| Homo sapiens cancer susceptibility candidate 1 (CASC1), mRNA Length = 2550 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1182 tgaaactgtttcagcagcacagtt 1205
>emb|AJ291743.1|NTA291743 Nicotiana tabacum partial mRNA for putative beta7 proteasome subunit (b7 gene) Length = 389 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 527 ttggggcccaatgagttcccatcatcccacat 558 ||||| ||||| |||||||||||||||||||| Sbjct: 180 ttgggacccaaggagttcccatcatcccacat 149
>gb|AY423543.1| Homo sapiens lung adenoma susceptibility 1-like protein (LAS1) mRNA, complete cds Length = 2151 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1044 tgaaactgtttcagcagcacagtt 1067
>gb|BC057795.1| Homo sapiens hypothetical protein FLJ10921, mRNA (cDNA clone IMAGE:5266518), partial cds Length = 2376 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1126 tgaaactgtttcagcagcacagtt 1149
>gb|BC028415.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone MGC:33578 IMAGE:4823620), complete cds Length = 2464 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1277 tgaaactgtttcagcagcacagtt 1300
>gb|BC031047.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone IMAGE:5270474) Length = 2377 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1127 tgaaactgtttcagcagcacagtt 1150
>dbj|AK093102.1| Homo sapiens cDNA FLJ35783 fis, clone TESTI2005568, weakly similar to TRANSLATION INITIATION FACTOR IF-2 Length = 2347 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1114 tgaaactgtttcagcagcacagtt 1137
>dbj|AK001783.1| Homo sapiens cDNA FLJ10921 fis, clone OVARC1000411 Length = 1784 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 551 tgaaactgtttcagcagcacagtt 574
>dbj|AB168925.1| Macaca fascicularis testis cDNA, clone: QtsA-15847, similar to human cancer susceptibility candidate 1 (CASC1), mRNA, RefSeq: NM_018272.2 Length = 2384 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 |||||||||||||||||||||||| Sbjct: 1125 tgaaactgtttcagcagcacagtt 1148
>ref|XM_875888.1| PREDICTED: Bos taurus similar to vesicle amine transport protein 1, transcript variant 3 (LOC510698), mRNA Length = 2365 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 cagcttcttcaaaagtcatgtcctca 307 |||||||||||||||||||| ||||| Sbjct: 259 cagcttcttcaaaagtcatggcctca 234
>ref|XM_587873.2| PREDICTED: Bos taurus similar to vesicle amine transport protein 1, transcript variant 1 (LOC510698), mRNA Length = 2654 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 cagcttcttcaaaagtcatgtcctca 307 |||||||||||||||||||| ||||| Sbjct: 548 cagcttcttcaaaagtcatggcctca 523
>gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, complete sequence Length = 100233 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 caaatccagtggcaatgtgatt 369 |||||||||||||||||||||| Sbjct: 397 caaatccagtggcaatgtgatt 418
>gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, complete sequence Length = 121822 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 caaatccagtggcaatgtgatt 369 |||||||||||||||||||||| Sbjct: 15917 caaatccagtggcaatgtgatt 15896
>gb|AF092915.1|AF092915 Nicotiana tabacum cytochrome P450-dependent fatty acid hydroxylase (CYP94A4) mRNA, complete cds Length = 1722 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 agcttaacagcttcttcaaaag 296 |||||||||||||||||||||| Sbjct: 707 agcttaacagcttcttcaaaag 686
>gb|AC108487.2| Homo sapiens chromosome 3 clone RP11-733E24, complete sequence Length = 180925 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 tttttcactccaccaagcacc 454 ||||||||||||||||||||| Sbjct: 172203 tttttcactccaccaagcacc 172223
>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence Length = 149542 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 tcttcaaaagtcatgtcctca 307 ||||||||||||||||||||| Sbjct: 24369 tcttcaaaagtcatgtcctca 24349
>gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence Length = 149951 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 tcttcaaaagtcatgtcctca 307 ||||||||||||||||||||| Sbjct: 143111 tcttcaaaagtcatgtcctca 143091
>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence Length = 152380 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 cccactccctccaataaggct 639 ||||||||||||||||||||| Sbjct: 37429 cccactccctccaataaggct 37449
>gb|AC025812.11|AC025812 Homo sapiens chromosome 3 clone RP11-182G24, complete sequence Length = 149006 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 tttttcactccaccaagcacc 454 ||||||||||||||||||||| Sbjct: 111648 tttttcactccaccaagcacc 111668
>gb|AF152365.1|AF152365 Homo sapiens constitutive fragile region FRA3B sequence Length = 246546 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 tttttcactccaccaagcacc 454 ||||||||||||||||||||| Sbjct: 145735 tttttcactccaccaagcacc 145755
>gb|AC118614.12| Mus musculus chromosome 18, clone RP23-477B20, complete sequence Length = 159912 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 622 actccctccaataaggctatgctttccaa 650 |||||||||||||||||||| ||| |||| Sbjct: 128837 actccctccaataaggctatacttcccaa 128809
>ref|NM_104523.2| Arabidopsis thaliana PBG1; endopeptidase/ peptidase/ threonine endopeptidase AT1G56450 (PBG1) mRNA, complete cds Length = 1032 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 719 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 660 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 659 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 600 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 599 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 556
>gb|AF347086.1| Trechispora kavinioides isolate 260 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1207 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 caaaggcagcaaacccccag 154 |||||||||||||||||||| Sbjct: 165 caaaggcagcaaacccccag 146
>gb|AC100600.22| Mus musculus chromosome 9, clone RP23-157H17, complete sequence Length = 225538 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cagagcaaatgtggagttca 22 |||||||||||||||||||| Sbjct: 164419 cagagcaaatgtggagttca 164400
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gcaagcacttctcaatgagcttaa 281 ||||||||| |||||||||||||| Sbjct: 212450 gcaagcactgctcaatgagcttaa 212427
>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete sequence Length = 202525 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ttaacagcttcttcaaaagt 297 |||||||||||||||||||| Sbjct: 66364 ttaacagcttcttcaaaagt 66345
>gb|AC165962.4| Mus musculus BAC clone RP23-362B7 from chromosome 17, complete sequence Length = 179745 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ttcctagctcatggcctacc 104 |||||||||||||||||||| Sbjct: 71742 ttcctagctcatggcctacc 71761
>gb|AC125544.4| Mus musculus BAC clone RP23-364A24 from chromosome 17, complete sequence Length = 159298 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ttcctagctcatggcctacc 104 |||||||||||||||||||| Sbjct: 53503 ttcctagctcatggcctacc 53484
>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence Length = 208152 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ggttctcaaaggcagcaaac 148 |||||||||||||||||||| Sbjct: 115542 ggttctcaaaggcagcaaac 115561
>ref|XM_793815.1| PREDICTED: Strongylocentrotus purpuratus similar to CG13567-PB, isoform B (LOC594372), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 acgagggctgaaactgtttc 64 |||||||||||||||||||| Sbjct: 1174 acgagggctgaaactgtttc 1155
>emb|Y13696.1|ATY13696 Arabidopsis thaliana mRNA for proteasome subunit prch Length = 600 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 268 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 209 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 208 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 149 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 148 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 105
>emb|CR857815.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0261 (from clone DKFZp459M0261) Length = 1807 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 tgaaactgtttcagcagcacagtt 76 ||||| |||||||||||||||||| Sbjct: 556 tgaaattgtttcagcagcacagtt 579
>gb|AC002524.1| Homo sapiens x BAC GS1-257G1 (Genome Systems Human BAC Library) complete sequence Length = 202540 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cttcaaaagtcatgtcctca 307 |||||||||||||||||||| Sbjct: 159822 cttcaaaagtcatgtcctca 159841
>dbj|AK221762.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL21-60-O20 Length = 1041 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 729 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 670 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 669 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 610 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 609 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 566
>gb|AY052739.1| Arabidopsis thaliana At1g56450/F13N6_3 mRNA, complete cds Length = 741 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 642 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 583 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 582 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 523 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 522 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 479
>gb|AY045596.1| Arabidopsis thaliana At1g56450/F13N6_3 mRNA, complete cds Length = 974 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 695 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 636 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 635 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 576 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 575 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 532
>gb|AF378880.1|AF378880 Arabidopsis thaliana At1g56450/F13N6_3 mRNA, complete cds Length = 1018 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 718 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 659 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 658 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 599 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 598 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 555
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 caatcatgttaaccatgcca 406 |||||||||||||||||||| Sbjct: 5576754 caatcatgttaaccatgcca 5576735
>emb|BX817388.1|CNS0AAIN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZB01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 545 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 293 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 234 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 233 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 174 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 173 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 130
>gb|AC025041.7|AC025041 Homo sapiens chromosome 15 clone RP11-316P21 map 15q21.2, complete sequence Length = 173387 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cagagcaaatgtggagttca 22 |||||||||||||||||||| Sbjct: 83848 cagagcaaatgtggagttca 83829
>gb|AY691910.1| Uncultured bacterium clone HZ27 unknown sequence Length = 8765 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cacgccattcaccacgaagg 325 |||||||||||||||||||| Sbjct: 5616 cacgccattcaccacgaagg 5597
>emb|AL929076.10| Mouse DNA sequence from clone RP23-64F21 on chromosome 2, complete sequence Length = 126565 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttgggccctttttcactccacca 448 |||||||||||| ||||||||||| Sbjct: 120460 tttgggccctttctcactccacca 120437
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 caatcatgttaaccatgcca 406 |||||||||||||||||||| Sbjct: 32130 caatcatgttaaccatgcca 32111
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 caatcatgttaaccatgcca 406 |||||||||||||||||||| Sbjct: 102982 caatcatgttaaccatgcca 102963
>gb|AC114591.15| Mus musculus chromosome 7, clone RP23-478G2, complete sequence Length = 212299 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atcatgttaaccatgccaag 408 |||||||||||||||||||| Sbjct: 193080 atcatgttaaccatgccaag 193061
>gb|AC113245.12| Mus musculus chromosome 7, clone RP23-175D5, complete sequence Length = 213428 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atcatgttaaccatgccaag 408 |||||||||||||||||||| Sbjct: 48562 atcatgttaaccatgccaag 48543
>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17, complete sequence Length = 205685 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cttcaaaagtcatgtcctca 307 |||||||||||||||||||| Sbjct: 188006 cttcaaaagtcatgtcctca 187987
>gb|AF043538.1|AF043538 Arabidopsis thaliana 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds Length = 1032 Score = 40.1 bits (20), Expect = 9.3 Identities = 128/164 (78%) Strand = Plus / Minus Query: 199 cgtgatcttggcaatctggaatttgttgatagatgatcggtcacggtacagcaggacaag 258 ||||||||| || ||||| | ||||| |||| |||| ||||||||| || || ||| | Sbjct: 684 cgtgatcttcgctatctgaagcttgttaatagcagatctgtcacggtaaagaagcacacg 625 Query: 259 caagcacttctcaatgagcttaacagcttcttcaaaagtcatgtcctcacgccattcacc 318 || || ||||||| ||||| ||| | ||||||||| ||| ||| || |||| ||| | Sbjct: 624 catacatttctcaagtagcttgacaccatcttcaaaactcaggtctgcatgccactcatc 565 Query: 319 acgaaggattgggattgccatatggttcccaaatccagtggcaa 362 |||||| ||||| | || | ||||| |||||||||||||||| Sbjct: 564 acgaagaattggcctagcaaggtggtttccaaatccagtggcaa 521 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,299,935 Number of Sequences: 3902068 Number of extensions: 5299935 Number of successful extensions: 87162 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 87023 Number of HSP's gapped (non-prelim): 138 length of query: 681 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 658 effective length of database: 17,143,297,704 effective search space: 11280289889232 effective search space used: 11280289889232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)