>RR31_SPIOL (P47910) 30S ribosomal protein S31, chloroplast (Fragment)|
          Length = 43

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -1

Query: 504 FSHSYGNARPRNKKKGTG 451
           F+HS+GNARP+NK KG G
Sbjct: 13  FNHSFGNARPKNKNKGRG 30

>GAL4_YEAST (P04386) Regulatory protein GAL4|
          Length = 881

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = +3

Query: 411 PSLEALEGRKAVLGLFPSSCYGAVHFHMSG*TFCLSLSFCPLFHSRLVKGETILKSQAET 590
           P L   +  ++++ L PS+ +G  +F+ SG     SLSF     +    G  ++ +Q  +
Sbjct: 745 PFLGQQQQLQSLVPLTPSALFGGANFNQSGNIADSSLSFT---FTNSSNGPNLITTQTNS 801

Query: 591 ILKSQLVQSSNVHPIF 638
              SQ + SSNVH  F
Sbjct: 802 QALSQPIASSNVHDNF 817

>SYFB_DESVH (Q728S0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 798

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +3

Query: 522 SFCPLFHSRLVKGETILKSQAETILKSQLVQSSNVHPIFNI 644
           S CPLFH R+++G  + KS A   ++ +L+ +  V PI NI
Sbjct: 213 SLCPLFHGRVLEGAAVRKSPA--WMRYRLI-AVGVRPISNI 250


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,069,036
Number of Sequences: 219361
Number of extensions: 1714817
Number of successful extensions: 3804
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3804
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)