ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15e21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107351.1| Zea mays PCO116928 mRNA sequence Length = 598 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 356 tccatgatgtcatcatcaatctcaattgcgatgatctccccgtcttcaaactgatccttc 415 |||| |||||| || |||||||| |||| |||||||||||||| || |||||||||||| Sbjct: 475 tccaggatgtcctcgtcaatctcgattgaaatgatctccccgtcatcgaactgatccttc 416 Query: 416 cttggaggcgctggaggggcgtaaagccgtgctgggcctgttcccttcttcttgttacgg 475 |||||||| |||||||| || | ||||| || || || ||||||||||||||||| || Sbjct: 415 cttggaggagctggaggagcaaagagccgcgcaggcccagttcccttcttcttgttgcgc 356 Query: 476 ggccgtgcatttccatatgagtggctgaaccttttgcctctctttgtctttctgtcccct 535 |||| ||||| |||||||| ||| ||||||||||||| || || || || |||||||| Sbjct: 355 ggcctcgcattgccatatgaatggttgaaccttttgccccttttcgttttcttgtcccct 296 Query: 536 cttccacagtagac 549 || || |||||||| Sbjct: 295 ctcccgcagtagac 282
>dbj|AK061231.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A09, full insert sequence Length = 623 Score = 103 bits (52), Expect = 7e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| Sbjct: 370 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 311 Query: 455 gttcccttcttcttgttacggggccgtgcatttccatatgagtggctgaaccttttgcct 514 ||||||||||||||||| || |||| |||||||| || |||||| |||||||||| || Sbjct: 310 gttcccttcttcttgttgcgcggcctcgcatttccgtacgagtggttgaacctttttccc 251 Query: 515 ctctttgtctttctgtcccctcttccacagta 546 ||||| ||||| |||||||||| || ||||| Sbjct: 250 ctcttggtcttcttgtcccctctcccgcagta 219
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 103 bits (52), Expect = 7e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| Sbjct: 1090 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 1031 Query: 455 gttcccttcttcttgttacggggccgtgcatttccatatgagtggctgaaccttttgcct 514 ||||||||||||||||| || |||| |||||||| || |||||| |||||||||| || Sbjct: 1030 gttcccttcttcttgttgcgcggcctcgcatttccgtacgagtggttgaacctttttccc 971 Query: 515 ctctttgtctttctgtcccctcttccacagta 546 ||||| ||||| |||||||||| || ||||| Sbjct: 970 ctcttggtcttcttgtcccctctcccgcagta 939
>dbj|AK060420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G05, full insert sequence Length = 723 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | ||||||| ||||| Sbjct: 380 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgtagggcca 321 Query: 455 gttcccttcttcttgttacggggccgtgcatttccatatgagtggctgaaccttttgcct 514 ||||||||||||||||| || |||| |||||||| || |||||| |||||||||| || Sbjct: 320 gttcccttcttcttgttgcgcggcctcgcatttccgtacgagtggttgaacctttttccc 261 Query: 515 ctctttgtctttctgtcccctcttccacagta 546 ||||| ||||| |||||||||| || ||||| Sbjct: 260 ctcttggtcttcttgtcccctctcccgcagta 229
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| Sbjct: 135160 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 135219 Query: 455 gttcccttcttcttgtt 471 ||||||||||||||||| Sbjct: 135220 gttcccttcttcttgtt 135236
>gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1725_E07, complete sequence Length = 87244 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| Sbjct: 35939 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 35998 Query: 455 gttcccttcttcttgtt 471 ||||||||||||||||| Sbjct: 35999 gttcccttcttcttgtt 36015
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| Sbjct: 5220657 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 5220716 Query: 455 gttcccttcttcttgtt 471 ||||||||||||||||| Sbjct: 5220717 gttcccttcttcttgtt 5220733
>dbj|AK058675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H07, full insert sequence Length = 629 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 395 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 454 ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| Sbjct: 415 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 356 Query: 455 gttcccttcttcttgtt 471 ||||||||||||||||| Sbjct: 355 gttcccttcttcttgtt 339
>gb|AC110817.6| Mus musculus BAC clone RP23-155B20 from 13, complete sequence Length = 200362 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttccacagt 545 ||||||||||||||||||||||||| Sbjct: 34644 gtctttctgtcccctcttccacagt 34668
>gb|AC160986.5| Mus musculus BAC clone RP23-258K21 from chromosome 6, complete sequence Length = 209886 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 513 ctctctttgtctttctgtcccct 535 ||||||||||||||||||||||| Sbjct: 27011 ctctctttgtctttctgtcccct 26989
>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence Length = 209230 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 520 tgtctttctgtcccctcttccacagta 546 ||||||||||||||||||| ||||||| Sbjct: 88736 tgtctttctgtcccctctttcacagta 88762
>gb|AC124188.5| Mus musculus BAC clone RP23-240C17 from 6, complete sequence Length = 224756 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 513 ctctctttgtctttctgtcccct 535 ||||||||||||||||||||||| Sbjct: 6607 ctctctttgtctttctgtcccct 6629
>gb|AC113301.7| Mus musculus chromosome 8, clone RP23-430G7, complete sequence Length = 195985 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 ctttgtctttctgtcccctcttc 539 ||||||||||||||||||||||| Sbjct: 187620 ctttgtctttctgtcccctcttc 187642
>gb|AC100322.8| Mus musculus chromosome 7, clone RP23-124O24, complete sequence Length = 219314 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttccaca 543 ||||||||||||||||||||||| Sbjct: 31251 gtctttctgtcccctcttccaca 31273
>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence Length = 188553 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 520 tgtctttctgtcccctcttccacagta 546 ||||||||||||||||||| ||||||| Sbjct: 153749 tgtctttctgtcccctctttcacagta 153775
>gb|AC159279.2| Mus musculus BAC clone RP23-342D8 from chromosome 12, complete sequence Length = 206464 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 632 aatattcaacatatccattctta 654 ||||||||||||||||||||||| Sbjct: 189725 aatattcaacatatccattctta 189703
>gb|AC126259.4| Mus musculus BAC clone RP23-330F19 from chromosome 6, complete sequence Length = 257100 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 513 ctctctttgtctttctgtcccct 535 ||||||||||||||||||||||| Sbjct: 136043 ctctctttgtctttctgtcccct 136065
>emb|AL691421.9| Mouse DNA sequence from clone RP23-21A16 on chromosome X, complete sequence Length = 221461 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 tttctgtcccctcttccacagta 546 ||||||||||||||||||||||| Sbjct: 85732 tttctgtcccctcttccacagta 85754
>gb|AC110041.13| Mus musculus chromosome 8, clone RP23-276O15, complete sequence Length = 190535 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 ctttgtctttctgtcccctcttc 539 ||||||||||||||||||||||| Sbjct: 21747 ctttgtctttctgtcccctcttc 21769
>gb|AC122556.15| Mus musculus chromosome 12, clone RP24-352D3, complete sequence Length = 167088 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 88813 tctttctgtcccctcttccaca 88834
>gb|AC146618.2| Mus musculus BAC clone RP23-5P3 from chromosome 10, complete sequence Length = 197233 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 96168 tctttctgtcccctcttccaca 96147
>gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence Length = 204267 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 cctctctttgtctttctgtcccctct 537 ||||||| |||||||||||||||||| Sbjct: 31534 cctctctctgtctttctgtcccctct 31559
>gb|AC154795.2| Mus musculus BAC clone RP24-486D21 from chromosome 14, complete sequence Length = 153985 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 81420 tctttctgtcccctcttccaca 81441
>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence Length = 142517 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 296 ttcataaaggacagggaaatca 317 |||||||||||||||||||||| Sbjct: 83005 ttcataaaggacagggaaatca 82984
>gb|AC151832.3| Mus musculus BAC clone RP24-68M1 from chromosome 10, complete sequence Length = 222815 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 191066 tctttctgtcccctcttccaca 191045
>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence Length = 169374 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 141853 tctttctgtcccctcttccaca 141832
>gb|AC007574.6|AC007574 Drosophila melanogaster, chromosome 2R, region 60D-60D, BAC clone BACR11C07, complete sequence Length = 171151 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 412 cttccttggaggcgctggaggg 433 |||||||||||||||||||||| Sbjct: 56936 cttccttggaggcgctggaggg 56957
>gb|AC158510.2| Mus musculus BAC clone RP24-236E11 from chromosome 9, complete sequence Length = 178963 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttccac 542 |||||||||||||||||||||| Sbjct: 94115 gtctttctgtcccctcttccac 94136
>gb|AC090659.19| Mus musculus strain C57BL/6J chromosome 14 clone rp23-473n18, complete sequence Length = 194320 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 cctctctttgtctttctgtcccctct 537 ||||||| |||||||||||||||||| Sbjct: 146742 cctctctctgtctttctgtcccctct 146767
>gb|AC154005.4| Mus musculus 6 BAC RP24-82B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 181556 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 170357 tctttctgtcccctcttccaca 170336
>gb|AC155913.5| Mus musculus 6 BAC RP24-402E22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162332 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 141703 tctttctgtcccctcttccaca 141724 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttcc 540 |||||||||||||||||||| Sbjct: 52617 gtctttctgtcccctcttcc 52598
>gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, complete sequence Length = 186827 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 21300 tctttctgtcccctcttccaca 21321
>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence, complete sequence Length = 110514 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 644 atccattcttaattctttttat 665 |||||||||||||||||||||| Sbjct: 68176 atccattcttaattctttttat 68197
>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete sequence Length = 310958 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 412 cttccttggaggcgctggaggg 433 |||||||||||||||||||||| Sbjct: 144989 cttccttggaggcgctggaggg 145010
>gb|AC145303.4| Mus musculus BAC clone RP23-411P20 from 14, complete sequence Length = 190168 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccaca 543 |||||||||||||||||||||| Sbjct: 165752 tctttctgtcccctcttccaca 165731
>emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chromosome 4, complete sequence Length = 176049 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttccacagta 546 ||||||||| |||||||||||||||| Sbjct: 92938 gtctttctgacccctcttccacagta 92913
>gb|AC110893.13| Mus musculus chromosome 3, clone RP24-141D20, complete sequence Length = 164857 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 649 ttcttaattctttttatgaga 669 ||||||||||||||||||||| Sbjct: 118208 ttcttaattctttttatgaga 118228
>gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, complete sequence Length = 175819 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 ctttctgtcccctcttccaca 543 ||||||||||||||||||||| Sbjct: 78067 ctttctgtcccctcttccaca 78087
>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250421 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttccacagt 545 |||| |||||||||||||||||||| Sbjct: 94580 gtctctctgtcccctcttccacagt 94556
>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence Length = 169938 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagta 546 ||||||| ||||||||||||||||| Sbjct: 125614 tctttctatcccctcttccacagta 125590
>gb|AC153510.10| Mus musculus 10 BAC RP23-151C4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197889 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttccacagt 545 |||| |||||||||||||||||||| Sbjct: 159560 gtctctctgtcccctcttccacagt 159536
>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence Length = 191814 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 523 ctttctgtcccctcttccaca 543 ||||||||||||||||||||| Sbjct: 63315 ctttctgtcccctcttccaca 63295
>gb|AC140436.3| Mus musculus BAC clone RP23-85O2 from chromosome 9, complete sequence Length = 142560 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagta 546 ||||||| ||||||||||||||||| Sbjct: 48162 tctttctatcccctcttccacagta 48138
>gb|AC124352.2| Mus musculus BAC clone RP24-477C23 from chromosome 9, complete sequence Length = 177886 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagta 546 ||||||| ||||||||||||||||| Sbjct: 83771 tctttctatcccctcttccacagta 83747
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence Length = 181083 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccac 542 ||||||||||||||||||||| Sbjct: 45012 tctttctgtcccctcttccac 44992
>gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence Length = 165116 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 510 tgcctctctttgtctttctgt 530 ||||||||||||||||||||| Sbjct: 82678 tgcctctctttgtctttctgt 82698
>emb|AL049634.8|HSJ576H24 Human DNA sequence from clone RP4-576H24 on chromosome 20 Contains the PTPNS1L12 gene for protein tyrosine phosphatase (non-receptor type substrate 1-like 2), a PTPNS pseudogene and part of the SIRPB1 gene for signal regulatory protein beta 1, complete sequence Length = 115478 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccac 542 ||||||||||||||||||||| Sbjct: 33718 tctttctgtcccctcttccac 33738
>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence Length = 204891 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 523 ctttctgtcccctcttccaca 543 ||||||||||||||||||||| Sbjct: 138639 ctttctgtcccctcttccaca 138619
>ref|XM_781292.1| PREDICTED: Strongylocentrotus purpuratus similar to Histone acetyltransferase MYST3 (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) (LOC581281), partial mRNA Length = 1743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaatgcaacagagaaggcaag 86 ||||||||||||||||||||| Sbjct: 190 gaatgcaacagagaaggcaag 210
>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence Length = 221791 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagta 546 ||||||| ||||||||||||||||| Sbjct: 120477 tctttctatcccctcttccacagta 120501
>emb|AL606470.15| Mouse DNA sequence from clone RP23-293J11 on chromosome 11 Contains a Friedreich ataxia protein (Frda) pseudogene, complete sequence Length = 203970 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccac 542 ||||||||||||||||||||| Sbjct: 58723 tctttctgtcccctcttccac 58703
>emb|BX936366.8| Mouse DNA sequence from clone RP23-197N3 on chromosome 4, complete sequence Length = 109966 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagta 546 ||||||| ||||||||||||||||| Sbjct: 96770 tctttctttcccctcttccacagta 96746
>gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, complete sequence Length = 210516 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttcca 541 ||||||||||||||||||||| Sbjct: 37817 gtctttctgtcccctcttcca 37837
>gb|AC096735.3| Homo sapiens BAC clone RP11-135M12 from 4, complete sequence Length = 193510 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 634 tattcaacatatccattcttaattctttt 662 |||||||||| |||| ||||||||||||| Sbjct: 51303 tattcaacatgtccactcttaattctttt 51331
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccac 542 ||||||||||||||||||||| Sbjct: 188839 tctttctgtcccctcttccac 188819
>gb|AC079990.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-327J16, complete sequence Length = 116793 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttccacagt 545 ||||||||| ||||||||||||||| Sbjct: 97825 gtctttctgccccctcttccacagt 97849
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 ctttctgtcccctcttccaca 543 ||||||||||||||||||||| Sbjct: 31313 ctttctgtcccctcttccaca 31333
>emb|AL928643.6| Mouse DNA sequence from clone RP23-110F5 on chromosome 4, complete sequence Length = 105965 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagta 546 ||||||| ||||||||||||||||| Sbjct: 94769 tctttctttcccctcttccacagta 94745
>emb|AL844866.17| Mouse DNA sequence from clone RP23-418O17 on chromosome X, complete sequence Length = 173461 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 515 ctctttgtctttctgtcccctcttccaca 543 ||||||||||||||| || |||||||||| Sbjct: 22074 ctctttgtctttctgcccactcttccaca 22046
>emb|AL845298.5| Mouse DNA sequence from clone RP23-280N11 on chromosome 2, complete sequence Length = 213826 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccac 542 ||||||||||||||||||||| Sbjct: 138529 tctttctgtcccctcttccac 138549
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 |||||||||||||||||| ||||| Sbjct: 31702 tctttctgtcccctcttctacagt 31725
>gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttcc 540 |||||||||||||||||||| Sbjct: 182501 gtctttctgtcccctcttcc 182482
>gb|AC139064.13| Mus musculus chromosome 1, clone RP23-76C20, complete sequence Length = 242463 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 141994 tctttctgtcccctcttcca 142013
>ref|XM_508922.1| PREDICTED: Pan troglodytes similar to adiponectin receptor 2 (LOC451742), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 229 tgtctttctgtcccctcttc 210
>gb|U10402.2| Caenorhabditis elegans cosmid C34E10, complete sequence Length = 36973 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttttttcgtctaaaaatact 27 |||||||||||||||||||| Sbjct: 19409 ttttttcgtctaaaaatact 19390
>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence Length = 183026 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 tttgtctttctgtcccctct 537 |||||||||||||||||||| Sbjct: 158037 tttgtctttctgtcccctct 158056
>gb|AY424280.1| Homo sapiens progestin and adipoQ receptor family member II (PAQR2) mRNA, complete cds Length = 3851 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 45 tgtctttctgtcccctcttc 26
>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence Length = 179087 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 129905 tctttctgtcccctcttcca 129886
>gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome 13, complete sequence Length = 222741 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 |||||||||| ||||||||||||| Sbjct: 50383 tctttctgtctcctcttccacagt 50406
>gb|AC134871.3| Mus musculus BAC clone RP23-183L19 from chromosome 3, complete sequence Length = 193373 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 tctttgtctttctgtcccctcttccaca 543 |||| ||||||||||||||| ||||||| Sbjct: 9281 tcttagtctttctgtccccttttccaca 9254
>gb|BC051858.2| Homo sapiens adiponectin receptor 2, mRNA (cDNA clone MGC:60215 IMAGE:6527208), complete cds Length = 1573 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 166 tgtctttctgtcccctcttc 147
>gb|AC139568.5| Mus musculus chromosome 12, clone RP23-208G5, complete sequence Length = 202882 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 ||||||||||| |||||||||||| Sbjct: 40286 tctttctgtcctctcttccacagt 40309
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 82392 tttctgtcccctcttccaca 82411
>gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosome 14, complete sequence Length = 205141 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 188954 tctttctgtcccctcttcca 188973
>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence Length = 225868 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 181346 tctttctgtcccctcttcca 181327
>gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosome 5, complete sequence Length = 199991 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 48684 tttctgtcccctcttccaca 48703
>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence Length = 262581 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 |||||||||||| ||||||||||| Sbjct: 38878 tctttctgtcccatcttccacagt 38901
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence Length = 189415 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 |||||||| ||||||||||||||| Sbjct: 108502 tctttctgccccctcttccacagt 108525
>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence Length = 221980 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 150512 tctttctgtcccctcttcca 150531
>gb|AC131761.4| Mus musculus BAC clone RP24-228J4 from chromosome 18, complete sequence Length = 167442 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 aattttgaagtcacagttgg 609 |||||||||||||||||||| Sbjct: 17388 aattttgaagtcacagttgg 17369
>emb|CT009550.5| Mouse DNA sequence from clone RP23-38F20 on chromosome 14, complete sequence Length = 229049 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 117975 tctttctgtcccctcttcca 117956
>gb|AC115117.5| Mus musculus BAC clone RP23-76J12 from chromosome 18, complete sequence Length = 197626 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 117210 tttctgtcccctcttccaca 117229
>gb|AC127347.4| Mus musculus BAC clone RP23-54N12 from chromosome 18, complete sequence Length = 220483 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 aattttgaagtcacagttgg 609 |||||||||||||||||||| Sbjct: 41217 aattttgaagtcacagttgg 41236
>gb|AC122219.3| Mus musculus BAC clone RP23-119F18 from 3, complete sequence Length = 196563 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 tctttgtctttctgtcccctcttccaca 543 |||| ||||||||||||||| ||||||| Sbjct: 113589 tcttagtctttctgtccccttttccaca 113562
>gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, complete sequence Length = 183544 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 |||||||||||||||||| ||||| Sbjct: 146821 tctttctgtcccctcttctacagt 146844
>gb|AC152061.6| Mus musculus BAC clone RP23-351K4 from chromosome 12, complete sequence Length = 206383 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagt 545 ||||||||||| |||||||||||| Sbjct: 88939 tctttctgtcctctcttccacagt 88916
>emb|CR954192.2| Medicago truncatula chromosome 5 clone mth2-15h3, COMPLETE SEQUENCE Length = 118151 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 caagcagagacaattttgaa 598 |||||||||||||||||||| Sbjct: 117455 caagcagagacaattttgaa 117436
>emb|AL365362.9| Human DNA sequence from clone RP5-1017O19 on chromosome 1 Contains a pseudogene similar to part of GDP dissociation inhibitor 2 (GDI2), complete sequence Length = 92339 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atatgcatacagcccaagca 183 |||||||||||||||||||| Sbjct: 8568 atatgcatacagcccaagca 8587
>emb|AL354811.13| Human DNA sequence from clone RP11-632L2 on chromosome 13 Contains a novel gene, the 5' end of the GPC6 gene for glypican 6 and a CpG island, complete sequence Length = 181567 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aaataattacttctaagaaa 244 |||||||||||||||||||| Sbjct: 95180 aaataattacttctaagaaa 95199
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 222153 tctttctgtcccctcttcca 222134
>emb|BX470172.19| Zebrafish DNA sequence from clone DKEY-3H3 in linkage group 5, complete sequence Length = 243270 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tatttaattttttcgtctaaaaat 24 ||||||||||||| |||||||||| Sbjct: 49179 tatttaatttttttgtctaaaaat 49156
>emb|BX470211.10| Zebrafish DNA sequence from clone DKEY-165A24 in linkage group 7, complete sequence Length = 173552 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 609 gttcaaagttcaaacgttca 628 |||||||||||||||||||| Sbjct: 97089 gttcaaagttcaaacgttca 97108
>gb|AC020656.33| Homo sapiens 12 BAC RP11-1143G9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123070 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 atccattctctccatgatgt 365 |||||||||||||||||||| Sbjct: 2404 atccattctctccatgatgt 2423
>gb|AC112163.7| Mus Musculus chromosome 13 BAC, clone MGS1-437011 ES cell line, Complete Sequence, complete sequence Length = 159042 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 98320 tctttctgtcccctcttcca 98339
>gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, complete sequence Length = 130226 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 tttgtctttctgtcccctct 537 |||||||||||||||||||| Sbjct: 47439 tttgtctttctgtcccctct 47458
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttccacag 544 ||||||||||| |||||||||||| Sbjct: 79851 gtctttctgtctcctcttccacag 79828
>gb|AC154350.3| Mus musculus BAC clone RP23-225B15 from chromosome 13, complete sequence Length = 213847 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 167936 tctttctgtcccctcttcca 167917
>gb|AE014176.1| Mus musculus piebald deletion region section 4 of 11 of the complete sequence Length = 395229 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttcc 540 |||||||||||||||||||| Sbjct: 79972 gtctttctgtcccctcttcc 79953
>gb|AC157275.2| Mus musculus BAC clone RP24-164M6 from chromosome 12, complete sequence Length = 175123 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttcc 540 |||||||||||||||||||| Sbjct: 152192 gtctttctgtcccctcttcc 152211
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215780 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 ttctgtcccctcttccacag 544 |||||||||||||||||||| Sbjct: 190531 ttctgtcccctcttccacag 190550
>ref|NM_024551.2| Homo sapiens adiponectin receptor 2 (ADIPOR2), mRNA Length = 3982 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 166 tgtctttctgtcccctcttc 147
>dbj|AK128511.1| Homo sapiens cDNA FLJ46666 fis, clone TRACH3007625 Length = 4018 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 220 tgtctttctgtcccctcttc 201
>dbj|AK127196.1| Homo sapiens cDNA FLJ45261 fis, clone BRHIP2021929 Length = 4012 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 221 tgtctttctgtcccctcttc 202
>gb|AC074211.3| Genomic sequence for Mus musculus, clone RP23-92G8, complete sequence Length = 212134 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 129651 tctttctgtcccctcttcca 129632
>gb|AC158628.7| Mus musculus 6 BAC RP23-147K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188746 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 aatattcaacatatccattc 651 |||||||||||||||||||| Sbjct: 111232 aatattcaacatatccattc 111251
>gb|AC162311.7| Mus musculus 6 BAC RP23-81K19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 266441 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 514 tctctttgtctttctgtcccctcttccacagt 545 |||| |||||||||| ||||||||||||||| Sbjct: 111667 tctcattgtctttctaccccctcttccacagt 111698
>dbj|AK013589.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900024I21 product:unclassifiable, full insert sequence Length = 1650 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 968 tctttctgtcccctcttcca 987
>gb|AC122937.4| Mus musculus BAC clone RP23-24P3 from chromosome 15, complete sequence Length = 196863 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 192608 tttctgtcccctcttccaca 192589
>gb|AC117725.23| Mus musculus chromosome 5, clone RP24-439K18, complete sequence Length = 180960 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 13778 tttctgtcccctcttccaca 13759
>dbj|AK051107.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030073C08 product:unclassifiable, full insert sequence Length = 1581 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcaggagtcacagggaatgc 71 |||||||||||||||||||| Sbjct: 868 tcaggagtcacagggaatgc 887
>gb|AC153927.6| Mus musculus 6 BAC RP23-74G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211584 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 ttctgtcccctcttccacag 544 |||||||||||||||||||| Sbjct: 58977 ttctgtcccctcttccacag 58996
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 agacacattttagaagcact 115 |||||||||||||||||||| Sbjct: 6290060 agacacattttagaagcact 6290041
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 ttggttcaaagttcaaacgt 625 |||||||||||||||||||| Sbjct: 29161484 ttggttcaaagttcaaacgt 29161503
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttccacagt 545 |||||||||||||||||| ||||| Sbjct: 213356 tctttctgtcccctcttctacagt 213379
>gb|AF163865.1|AF163865 Mus musculus alpha-synuclein (Snca) gene, complete cds Length = 118777 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 514 tctctttgtctttctgtcccctcttccacagt 545 |||| |||||||||| ||||||||||||||| Sbjct: 82409 tctcattgtctttctaccccctcttccacagt 82378
>gb|AC013276.5| Homo sapiens BAC clone RP11-467A23 from 2, complete sequence Length = 53394 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 cttttgcctctctttgtctt 525 |||||||||||||||||||| Sbjct: 29621 cttttgcctctctttgtctt 29640
>gb|AC104395.4| Homo sapiens BAC clone RP11-488M9 from 2, complete sequence Length = 114032 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tgccagtttccctatatgcataca 174 ||||||||||||||| |||||||| Sbjct: 12109 tgccagtttccctatttgcataca 12132
>gb|AC005343.1| Homo sapiens 12 BAC RP11-21K20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137213 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 121451 tgtctttctgtcccctcttc 121470
>gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207904 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 aatattcaacatatccattc 651 |||||||||||||||||||| Sbjct: 7669 aatattcaacatatccattc 7688
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 ttggttcaaagttcaaacgt 625 |||||||||||||||||||| Sbjct: 121850 ttggttcaaagttcaaacgt 121869
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 ttggttcaaagttcaaacgt 625 |||||||||||||||||||| Sbjct: 7271 ttggttcaaagttcaaacgt 7290
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1116_C08 Length = 102317 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 agacacattttagaagcact 115 |||||||||||||||||||| Sbjct: 40620 agacacattttagaagcact 40601
>emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chromosome X, complete sequence Length = 209800 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 38257 tctttctgtcccctcttcca 38276
>gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, complete sequence Length = 157535 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 1879 tctttctgtcccctcttcca 1898
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ataatgacaaaataattact 280 |||||||||||||||||||| Sbjct: 33141 ataatgacaaaataattact 33160
>gb|AC151669.5| Mus musculus chromosome 5, clone RP23-44L13, complete sequence Length = 254022 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 119506 tctttctgtcccctcttcca 119487
>gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, complete sequence Length = 216362 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 211156 tctttctgtcccctcttcca 211175
>gb|AC104197.14| Mus musculus chromosome 8, clone RP24-319N16, complete sequence Length = 195334 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 gtctttctgtcccctcttcc 540 |||||||||||||||||||| Sbjct: 142813 gtctttctgtcccctcttcc 142794
>emb|AL592077.8| Zebrafish DNA sequence from clone XX-DZ35C18, complete sequence Length = 53352 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tggtcaagggagagacaatt 569 |||||||||||||||||||| Sbjct: 17208 tggtcaagggagagacaatt 17189
>emb|CR854851.12| Zebrafish DNA sequence from clone DKEY-98D7 in linkage group 16, complete sequence Length = 218036 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 508 tttgcctctctttgtctttctgtc 531 ||||| |||||||||||||||||| Sbjct: 99241 tttgcttctctttgtctttctgtc 99264
>gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, complete sequence Length = 228289 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 42552 tttctgtcccctcttccaca 42533
>gb|AC154010.3| Mus musculus 6 BAC RP24-493P16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 213098 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 514 tctctttgtctttctgtcccctcttccacagt 545 |||| |||||||||| ||||||||||||||| Sbjct: 206777 tctcattgtctttctaccccctcttccacagt 206808
>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete sequence Length = 187999 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 171814 tctttctgtcccctcttcca 171833
>gb|AC115820.11| Mus musculus chromosome 8, clone RP23-479K9, complete sequence Length = 185977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 gtctttctgtcccctcttcc 540 |||||||||||||||||||| Sbjct: 182917 gtctttctgtcccctcttcc 182936
>gb|AC138307.2| Mus musculus BAC clone RP24-159M5 from 12, complete sequence Length = 165732 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 tttgaagtcacagttggttc 612 |||||||||||||||||||| Sbjct: 85273 tttgaagtcacagttggttc 85254
>gb|AC132953.2| Mus musculus BAC clone RP24-202D5 from 1, complete sequence Length = 150428 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 18953 tctttctgtcccctcttcca 18934
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence Length = 166720 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ataatgacaaaataattact 280 |||||||||||||||||||| Sbjct: 67552 ataatgacaaaataattact 67533
>gb|AC136517.3| Mus musculus BAC clone RP23-259O15 from 1, complete sequence Length = 220632 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgtctttctgtcccctcttc 539 |||||||||||||||||||| Sbjct: 66517 tgtctttctgtcccctcttc 66498
>gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, complete sequence Length = 215582 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttccacagt 545 |||||||||||| ||||||||||| Sbjct: 95126 tctttctgtcccatcttccacagt 95103
>gb|AC154851.3| Mus musculus BAC clone RP23-28P10 from chromosome 13, complete sequence Length = 234202 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tcaggagtcacagggaatgc 71 |||||||||||||||||||| Sbjct: 67339 tcaggagtcacagggaatgc 67320
>emb|AL772359.8| Mouse DNA sequence from clone RP23-305E10 on chromosome 11, complete sequence Length = 105736 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 88516 tctttctgtcccctcttcca 88535
>emb|AL671885.13| Mouse DNA sequence from clone RP23-132C19 on chromosome X, complete sequence Length = 154019 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 36894 tctttctgtcccctcttcca 36875
>gb|AC136457.3| Mus musculus BAC clone RP23-76G19 from chromosome 13, complete sequence Length = 204369 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gaattgtatttcataaagga 306 |||||||||||||||||||| Sbjct: 140669 gaattgtatttcataaagga 140650
>gb|AC170086.2| Mus musculus BAC clone RP24-127E11 from chromosome 13, complete sequence Length = 167543 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 36371 tctttctgtcccctcttcca 36352
>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete sequence Length = 203581 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tttctgtcccctcttccaca 543 |||||||||||||||||||| Sbjct: 147538 tttctgtcccctcttccaca 147557
>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete sequence Length = 196812 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tctttctgtcccctcttcca 541 |||||||||||||||||||| Sbjct: 170185 tctttctgtcccctcttcca 170204
>emb|AL833798.8| Mouse DNA sequence from clone RP23-130L21 on chromosome 4, complete sequence Length = 214799 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 tctctttgtctttctgtccc 533 |||||||||||||||||||| Sbjct: 66239 tctctttgtctttctgtccc 66220
>emb|AL121657.4|CNS01DS7 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 41M14 of library CITB_978_SKB from chromosome 2 of Homo sapiens (Human) Length = 151949 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttttttcgtctaaaaatact 27 |||||||||||||||||||| Sbjct: 31719 ttttttcgtctaaaaatact 31700 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,449,001 Number of Sequences: 3902068 Number of extensions: 7449001 Number of successful extensions: 160735 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 160212 Number of HSP's gapped (non-prelim): 523 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
