>gb|BT016645.1| Zea mays clone Contig478 mRNA sequence
          Length = 1606

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 432  tcttcaaatgttgcttgaaatccatgatatcacc 465
            ||||||| |||  |||||||||||||||||||||
Sbjct: 1385 tcttcaagtgtgccttgaaatccatgatatcacc 1352

>gb|AY103960.1| Zea mays PCO139646 mRNA sequence
          Length = 2066

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 432  tcttcaaatgttgcttgaaatccatgatatcacc 465
            ||||||| |||  |||||||||||||||||||||
Sbjct: 1807 tcttcaagtgtgccttgaaatccatgatatcacc 1774

>ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@) on chromosome 7
          Length = 140728

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 177    ctttgagaatcccagagcaaa 197
              |||||||||||||||||||||
Sbjct: 119708 ctttgagaatcccagagcaaa 119728



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 177    ctttgagaatcccagagcaaa 197
              |||||||||||||||||||||
Sbjct: 103604 ctttgagaatcccagagcaaa 103624

>gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome 7, complete sequence
          Length = 186561

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 269   tagagaagaagatacgttgta 289
             |||||||||||||||||||||
Sbjct: 73338 tagagaagaagatacgttgta 73358

>gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complete sequence
          Length = 171816

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   ctttgagaatcccagagcaaa 197
             |||||||||||||||||||||
Sbjct: 91243 ctttgagaatcccagagcaaa 91223



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   ctttgagaatcccagagcaaa 197
             |||||||||||||||||||||
Sbjct: 75139 ctttgagaatcccagagcaaa 75119

>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence
          Length = 140691

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 177    ctttgagaatcccagagcaaa 197
              |||||||||||||||||||||
Sbjct: 119675 ctttgagaatcccagagcaaa 119695



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 177    ctttgagaatcccagagcaaa 197
              |||||||||||||||||||||
Sbjct: 103570 ctttgagaatcccagagcaaa 103590

>gb|AC154792.2| Mus musculus BAC clone RP23-85E10 from chromosome 13, complete sequence
          Length = 201302

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 430    tttcttcaaatgttgcttgaa 450
              |||||||||||||||||||||
Sbjct: 154856 tttcttcaaatgttgcttgaa 154836

>emb|CT033775.6| Mouse DNA sequence from clone RP24-145H15 on chromosome 13, complete
              sequence
          Length = 168176

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 430    tttcttcaaatgttgcttgaa 450
              |||||||||||||||||||||
Sbjct: 118918 tttcttcaaatgttgcttgaa 118938

>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 128  gttgcttgaaattcangatatca 150
            ||||||||||||||| |||||||
Sbjct: 4012 gttgcttgaaattcatgatatca 3990

>gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete sequence
          Length = 107705

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   aaaagacatgaaattagaga 421
             ||||||||||||||||||||
Sbjct: 35357 aaaagacatgaaattagaga 35338

>gb|U41746.2| Caenorhabditis elegans cosmid T18H9, complete sequence
          Length = 27711

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 150  accatantaaaatgaaaatcttc 172
            |||||| ||||||||||||||||
Sbjct: 9572 accataataaaatgaaaatcttc 9594

>emb|AL359180.17| Human DNA sequence from clone RP11-320G21 on chromosome 13, complete
              sequence
          Length = 159229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    gagaaggaaaagacatgaaa 414
              ||||||||||||||||||||
Sbjct: 131087 gagaaggaaaagacatgaaa 131106

>gb|AC084024.17| Homo sapiens chromosome 8, clone RP11-90P5, complete sequence
          Length = 135404

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 410 tgaaattagagaccagntcttttcttc 436
           |||||||||||||||  ||||||||||
Sbjct: 214 tgaaattagagaccatttcttttcttc 240

>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87
          Length = 196339

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    aagatccgaaaattaaataa 244
              ||||||||||||||||||||
Sbjct: 150092 aagatccgaaaattaaataa 150073

>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18,
             complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   cttcaaatgttgcttgaaat 452
             ||||||||||||||||||||
Sbjct: 58652 cttcaaatgttgcttgaaat 58633



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cttcaaatgttgcttgaaat 139
             ||||||||||||||||||||
Sbjct: 58652 cttcaaatgttgcttgaaat 58633

>gb|AC144670.1| Homo sapiens chromosome 8, clone XXfos-85539D6, complete sequence
          Length = 37413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 410  tgaaattagagaccagntcttttcttc 436
            |||||||||||||||  ||||||||||
Sbjct: 3074 tgaaattagagaccatttcttttcttc 3048

>ref|NM_001028969.2| Caenorhabditis elegans INneXin family member (inx-10) (inx-10)
           mRNA, complete cds
          Length = 1556

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 150 accatantaaaatgaaaatcttc 172
           |||||| ||||||||||||||||
Sbjct: 942 accataataaaatgaaaatcttc 920

>ref|NM_001028968.2| Caenorhabditis elegans INneXin family member (inx-10) (inx-10)
           mRNA, complete cds
          Length = 1970

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 150 accatantaaaatgaaaatcttc 172
           |||||| ||||||||||||||||
Sbjct: 942 accataataaaatgaaaatcttc 920

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 197      aacaaaccatcatggatcaa 216
                ||||||||||||||||||||
Sbjct: 22577226 aacaaaccatcatggatcaa 22577245

>gb|AY594332.1| Aspergillus niger glutamine:fructose-6-phosphate amidotransferase
            (gfaA) gene, complete cds
          Length = 9396

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  ccgagaaggaaaagacatga 412
            ||||||||||||||||||||
Sbjct: 7861 ccgagaaggaaaagacatga 7842

>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   aacaaaccatcatggatcaa 216
             ||||||||||||||||||||
Sbjct: 57608 aacaaaccatcatggatcaa 57627

>emb|BX293537.10| Mouse DNA sequence from clone RP23-240M8 on chromosome X, complete
             sequence
          Length = 163726

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 391   agccgagaaggaaaagacatgaaa 414
             ||||||||||||||||| ||||||
Sbjct: 36514 agccgagaaggaaaagaaatgaaa 36537

>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195237

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   caaaacaaaccatcatggat 213
             ||||||||||||||||||||
Sbjct: 35723 caaaacaaaccatcatggat 35742

>dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1836B05, complete
              sequence
          Length = 156888

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 410    tgaaattagagaccagntcttttcttc 436
              |||||||||||||||  ||||||||||
Sbjct: 155525 tgaaattagagaccatttcttttcttc 155551

>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F19F18 (ESSA project)
          Length = 91740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aagatccgaaaattaaataa 244
             ||||||||||||||||||||
Sbjct: 26670 aagatccgaaaattaaataa 26651

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 330     taaatgatggaaactttctg 349
               ||||||||||||||||||||
Sbjct: 4013381 taaatgatggaaactttctg 4013362

>gb|AC004388.1|AC004388 Homo Sapiens Chromosome X clone bWXD306, complete sequence
          Length = 243041

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    cagagcaaaacaaaccatca 208
              ||||||||||||||||||||
Sbjct: 109453 cagagcaaaacaaaccatca 109434

>dbj|AB022785.1| Homo sapiens ASH2L gene, complete cds, similar to Drosophila ash2
            gene
          Length = 34200

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 410  tgaaattagagaccagntcttttcttc 436
            |||||||||||||||  ||||||||||
Sbjct: 9099 tgaaattagagaccatttcttttcttc 9125

>dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 1/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 410   tgaaattagagaccagntcttttcttc 436
             |||||||||||||||  ||||||||||
Sbjct: 60548 tgaaattagagaccatttcttttcttc 60522


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,350,931
Number of Sequences: 3902068
Number of extensions: 4350931
Number of successful extensions: 76900
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76802
Number of HSP's gapped (non-prelim): 98
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)