ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genom... 361 2e-96
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 361 2e-96
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 361 2e-96
4dbj|AK062981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
5gb|AY106192.1| Zea mays PCO072441 mRNA sequence 289 6e-75
6gb|BT016356.1| Zea mays clone Contig189 mRNA sequence 274 4e-70
7gb|AY389672.1| Hyacinthus orientalis unknown mRNA 131 3e-27
8gb|AY389729.1| Hyacinthus orientalis At1g67350-like protein mRNA... 131 3e-27
9gb|AY389726.1| Hyacinthus orientalis unknown mRNA 119 1e-23
10gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 52 0.003
11gb|AF366446.1|AF366446 Allium cepa clone AGF125 maintainer line ... 50 0.010
12gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 48 0.039
13dbj|AB189463.1| Rhodobacter sphaeroides f. sp. denitrificans tre... 48 0.039
14gb|AC117673.18| Mus musculus chromosome 1, clone RP23-390I1, com... 46 0.15
15gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosom... 44 0.61
16ref|NG_000017.2| Homo sapiens protocadherin beta cluster (PCDHB@... 44 0.61
17gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer... 44 0.61
18emb|AL807806.6| Mouse DNA sequence from clone RP23-67K19 on chro... 44 0.61
19emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chro... 44 0.61
20gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosom... 44 0.61
21gb|BC066980.1| Homo sapiens chromosome 5 open reading frame 25, ... 44 0.61
22gb|BC037298.1| Homo sapiens chromosome 5 open reading frame 25, ... 44 0.61
23gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosom... 44 0.61
24gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, c... 44 0.61
25ref|NM_198567.1| Homo sapiens chromosome 5 open reading frame 25... 44 0.61
26emb|AL731860.8| Mouse DNA sequence from clone RP23-367H4 on chro... 44 0.61
27gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, compl... 44 0.61
28gb|AC116427.1| Homo sapiens chromosome 5 clone CTD-2316N20, comp... 44 0.61
29dbj|AK138696.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 44 0.61
30gb|AC026400.4| Homo sapiens chromosome 5 clone CTB-173O12, compl... 44 0.61
31emb|BX005281.15| Mouse DNA sequence from clone RP23-268A11 on ch... 44 0.61
32gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, compl... 44 0.61
33gb|AC025436.2|AC025436 Homo sapiens chromosome 5 clone CTC-429E1... 44 0.61
34gb|AC005754.1|AC005754 Homo sapiens chromosome 5, BAC clone 34j1... 44 0.61
35emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chro... 44 0.61
36gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, compl... 44 0.61
37emb|AL731814.13| Mouse DNA sequence from clone RP23-109J20 on ch... 44 0.61
38gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, com... 44 0.61
39gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Can... 42 2.4
40gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome... 42 2.4
41gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 42 2.4
42emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on ch... 42 2.4
43gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.4
44emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 42 2.4
45gb|AC116993.2| Homo sapiens chromosome 1 clone RP4-561P1, comple... 42 2.4
46dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
47gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 42 2.4
48gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 42 2.4
49gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cance... 42 2.4
50gb|AC153896.10| Mus musculus 10 BAC RP23-114D16 (Roswell Park Ca... 42 2.4
51gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.4
52dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
53dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
54dbj|AK101257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
55ref|XM_524448.1| PREDICTED: Pan troglodytes zinc finger, SWIM do... 40 9.5
56gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 9.5
57ref|XM_882793.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 9.5
58gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 9.5
59ref|NM_023072.1| Homo sapiens zinc finger, SWIM-type containing ... 40 9.5
60gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome... 40 9.5
61gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, com... 40 9.5
62gb|AC122039.4| Mus musculus BAC clone RP24-432H3 from chromosome... 40 9.5
63gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, comple... 40 9.5
64ref|XM_759197.1| Theileria parva strain Muguga chromosome 4 hypo... 40 9.5
65gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 9.5
66emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 9.5
67emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 9.5
68emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 9.5
69emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.5
70emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 9.5
71gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 9.5
72gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, compl... 40 9.5
73gb|AC025264.16| Homo sapiens 12 BAC RP11-704P17 (Roswell Park Ca... 40 9.5
74dbj|AK022283.1| Homo sapiens cDNA FLJ12221 fis, clone MAMMA1001091 40 9.5
75gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase... 40 9.5
76gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, comp... 40 9.5
77gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence 40 9.5
78gb|BC102654.1| Bos taurus cDNA clone IMAGE:7956015, partial cds 40 9.5
79dbj|AK079280.1| Mus musculus adult male urinary bladder cDNA, RI... 40 9.5
80dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
81gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus mac... 40 9.5
82emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chr... 40 9.5
83dbj|AK024452.1| Homo sapiens mRNA for FLJ00044 protein, partial cds 40 9.5
84dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
85ref|XM_310742.2| Anopheles gambiae str. PEST ENSANGP00000010052 ... 40 9.5
86gb|AC156791.1| Mus musculus BAC clone RP24-250L13 from 9, comple... 40 9.5
87gb|AF136942.1|AF136942 Hordeum vulgare nicotianamine synthase 2 ... 40 9.5
88gb|AY772007.1| Nocardioides sp. JS614 putative PAPS reductase ge... 40 9.5
89gb|AY675212.1| Oryzias latipes hypothetical protein mRNA, partia... 40 9.5 
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
              sequence
          Length = 121849

 Score =  361 bits (182), Expect = 2e-96
 Identities = 230/246 (93%)
 Strand = Plus / Plus

                                                                          
Query: 334    gtggcgggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggg 393
              |||||||  ||||| |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 105036 gtggcggtggaggacgtcgtcgtaggggtcgcggcggccgggggcgtggctgatctgggg 105095

                                                                          
Query: 394    gtcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 453
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105096 atcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 105155

                                                                          
Query: 454    gagcgcccaggccgccttggtgcgctcgcaccgctccttcatccggtagacgtgcgcccg 513
              |||   ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 105156 gaggctccacgccgccttggtgcgctcgcaccgctccttcatccggtacacgtgctcccg 105215

                                                                          
Query: 514    ctgcgcctcgtcccgctgctccgggtcctccatcagccgcaggatcaggttctccgcgaa 573
              ||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 105216 ctgcgccgcgtcccgcttccccgggtcctccatcatccgcaggatcaggttctccgcgaa 105275

                    
Query: 574    ctccat 579
              ||||||
Sbjct: 105276 ctccat 105281
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  361 bits (182), Expect = 2e-96
 Identities = 230/246 (93%)
 Strand = Plus / Minus

                                                                            
Query: 334      gtggcgggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggg 393
                |||||||  ||||| |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 27073855 gtggcggtggaggacgtcgtcgtaggggtcgcggcggccgggggcgtggctgatctgggg 27073796

                                                                            
Query: 394      gtcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 453
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27073795 atcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 27073736

                                                                            
Query: 454      gagcgcccaggccgccttggtgcgctcgcaccgctccttcatccggtagacgtgcgcccg 513
                |||   ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 27073735 gaggctccacgccgccttggtgcgctcgcaccgctccttcatccggtacacgtgctcccg 27073676

                                                                            
Query: 514      ctgcgcctcgtcccgctgctccgggtcctccatcagccgcaggatcaggttctccgcgaa 573
                ||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27073675 ctgcgccgcgtcccgcttccccgggtcctccatcatccgcaggatcaggttctccgcgaa 27073616

                      
Query: 574      ctccat 579
                ||||||
Sbjct: 27073615 ctccat 27073610



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 239      aaatgagttctccttattttg 259
                |||||||||||||||||||||
Sbjct: 35276111 aaatgagttctccttattttg 35276091
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  361 bits (182), Expect = 2e-96
 Identities = 230/246 (93%)
 Strand = Plus / Minus

                                                                            
Query: 334      gtggcgggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggg 393
                |||||||  ||||| |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 27165178 gtggcggtggaggacgtcgtcgtaggggtcgcggcggccgggggcgtggctgatctgggg 27165119

                                                                            
Query: 394      gtcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 453
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27165118 atcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 27165059

                                                                            
Query: 454      gagcgcccaggccgccttggtgcgctcgcaccgctccttcatccggtagacgtgcgcccg 513
                |||   ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 27165058 gaggctccacgccgccttggtgcgctcgcaccgctccttcatccggtacacgtgctcccg 27164999

                                                                            
Query: 514      ctgcgcctcgtcccgctgctccgggtcctccatcagccgcaggatcaggttctccgcgaa 573
                ||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27164998 ctgcgccgcgtcccgcttccccgggtcctccatcatccgcaggatcaggttctccgcgaa 27164939

                      
Query: 574      ctccat 579
                ||||||
Sbjct: 27164938 ctccat 27164933



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 239      aaatgagttctccttattttg 259
                |||||||||||||||||||||
Sbjct: 35366183 aaatgagttctccttattttg 35366163
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>dbj|AK062981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-F03, full
           insert sequence
          Length = 583

 Score =  361 bits (182), Expect = 2e-96
 Identities = 230/246 (93%)
 Strand = Plus / Minus

                                                                       
Query: 334 gtggcgggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggg 393
           |||||||  ||||| |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 295 gtggcggtggaggacgtcgtcgtaggggtcgcggcggccgggggcgtggctgatctgggg 236

                                                                       
Query: 394 gtcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 453
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 176

                                                                       
Query: 454 gagcgcccaggccgccttggtgcgctcgcaccgctccttcatccggtagacgtgcgcccg 513
           |||   ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 175 gaggctccacgccgccttggtgcgctcgcaccgctccttcatccggtacacgtgctcccg 116

                                                                       
Query: 514 ctgcgcctcgtcccgctgctccgggtcctccatcagccgcaggatcaggttctccgcgaa 573
           ||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 115 ctgcgccgcgtcccgcttccccgggtcctccatcatccgcaggatcaggttctccgcgaa 56

                 
Query: 574 ctccat 579
           ||||||
Sbjct: 55  ctccat 50
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>gb|AY106192.1| Zea mays PCO072441 mRNA sequence
          Length = 708

 Score =  289 bits (146), Expect = 6e-75
 Identities = 230/258 (89%)
 Strand = Plus / Minus

                                                                       
Query: 334 gtggcgggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggg 393
           ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 408 gtggcgggcgatgaggtcgtcgtaggggtcccgacggccggcggcctggctgatctgggg 349

                                                                       
Query: 394 gtcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 453
            |||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 348 atcccaggagagctgcgagttgaagcggtcgaaggtccagaagccgtaggggcgcagagg 289

                                                                       
Query: 454 gagcgcccaggccgccttggtgcgctcgcaccgctccttcatccggtagacgtgcgcccg 513
           |||   ||| |||||||| ||||||||||||||||||||||||  |||||| ||| ||||
Sbjct: 288 gaggctccacgccgccttagtgcgctcgcaccgctccttcatcttgtagacatgctcccg 229

                                                                       
Query: 514 ctgcgcctcgtcccgctgctccgggtcctccatcagccgcaggatcaggttctccgcgaa 573
           | |  ||| ||| ||||  ||||||||||||||||| || |||||||| |||||||||||
Sbjct: 228 ccgaacctggtcgcgcttgtccgggtcctccatcagacggaggatcagattctccgcgaa 169

                             
Query: 574 ctccatgatgaatcccat 591
            ||||||||||| |||||
Sbjct: 168 gtccatgatgaaacccat 151
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>gb|BT016356.1| Zea mays clone Contig189 mRNA sequence
          Length = 636

 Score =  274 bits (138), Expect = 4e-70
 Identities = 228/258 (88%)
 Strand = Plus / Minus

                                                                       
Query: 334 gtggcgggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggg 393
           ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 354 gtggcgggcgatgaggtcgtcgtaggggtcccgacggccggcggcctggctgatctgggg 295

                                                                       
Query: 394 gtcccaggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcggagcgg 453
            |||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 294 atcccaggagagctgcgagttgaagcggtcgaaggtccagaagccgtaggggcgcagagg 235

                                                                       
Query: 454 gagcgcccaggccgccttggtgcgctcgcaccgctccttcatccggtagacgtgcgcccg 513
           |||   ||| |||||||| |||||||||||||||||||||||   |||||| ||| ||||
Sbjct: 234 gaggctccacgccgccttagtgcgctcgcaccgctccttcattttgtagacatgctcccg 175

                                                                       
Query: 514 ctgcgcctcgtcccgctgctccgggtcctccatcagccgcaggatcaggttctccgcgaa 573
           | |  ||| ||| ||||  ||||||||||||||||| || |||||||  |||||||||||
Sbjct: 174 ccgaacctggtcgcgcttgtccgggtcctccatcagacggaggatcatattctccgcgaa 115

                             
Query: 574 ctccatgatgaatcccat 591
            ||||||||||| |||||
Sbjct: 114 gtccatgatgaaacccat 97
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>gb|AY389672.1| Hyacinthus orientalis unknown mRNA
          Length = 621

 Score =  131 bits (66), Expect = 3e-27
 Identities = 99/110 (90%)
 Strand = Plus / Minus

                                                                       
Query: 340 ggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggggtccca 399
           ||||||||||||||||||||||||||||||||| |   ||||||||||||| | ||||||
Sbjct: 329 ggcgaggaggtcgtcgtaggggtcgcggcggccaggaacctggctgatctgagcgtccca 270

                                                             
Query: 400 ggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcgga 449
           || |||||||| |||||| ||||||||||||||||| ||||| |||||||
Sbjct: 269 ggcgagctgggcgttgaaccggtcgaaggtccagaatccgtaagggcgga 220



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 539 tcctccatcagccgcaggatcaggttctccgcgaactccat 579
           ||||||||||  || |||||||| ||||| |||||||||||
Sbjct: 130 tcctccatcatacgaaggatcagattctcagcgaactccat 90
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>gb|AY389729.1| Hyacinthus orientalis At1g67350-like protein mRNA, complete cds
          Length = 628

 Score =  131 bits (66), Expect = 3e-27
 Identities = 99/110 (90%)
 Strand = Plus / Minus

                                                                       
Query: 340 ggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggggtccca 399
           ||||||||||||||||||||||||||||||||| |   ||||||||||||| | ||||||
Sbjct: 324 ggcgaggaggtcgtcgtaggggtcgcggcggccaggaacctggctgatctgagcgtccca 265

                                                             
Query: 400 ggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcgga 449
           || |||||||| |||||| ||||||||||||||||| ||||| |||||||
Sbjct: 264 ggcgagctgggcgttgaaccggtcgaaggtccagaatccgtaagggcgga 215



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 539 tcctccatcagccgcaggatcaggttctccgcgaactccat 579
           ||||||||||  || |||||||| ||||| |||||||||||
Sbjct: 125 tcctccatcatacgaaggatcagattctcagcgaactccat 85
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>gb|AY389726.1| Hyacinthus orientalis unknown mRNA
          Length = 650

 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 ggcgaggaggtcgtcgtaggggtcgcggcggccggcggcctggctgatctgggggtccca 399
           ||||||||||||||||||||||||||||||||| |   ||||||||||||| | ||||||
Sbjct: 325 ggcgaggaggtcgtcgtaggggtcgcggcggccaggaacctggctgatctgagagtccca 266

                                                           
Query: 400 ggagagctgggagttgaagcggtcgaaggtccagaagccgtaggggcg 447
           || |||||| | |||||| ||||||||||||||||| ||||| |||||
Sbjct: 265 ggcgagctgtgcgttgaaccggtcgaaggtccagaatccgtacgggcg 218



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 539 tcctccatcagccgcaggatcaggttctccgcgaactccat 579
           ||||||||||  || |||||||| ||||| |||||||||||
Sbjct: 126 tcctccatcatacgaaggatcagattctcagcgaactccat 86
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 331    ggcgtggcgggcgaggaggtcgtcgt 356
              ||||||||||||||||||||||||||
Sbjct: 229513 ggcgtggcgggcgaggaggtcgtcgt 229488
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>gb|AF366446.1|AF366446 Allium cepa clone AGF125 maintainer line sequence
          Length = 498

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 554 aggatcaggttctccgcgaactccatgatgaat 586
           ||||| |||||||||||||||||||| ||||||
Sbjct: 436 aggattaggttctccgcgaactccattatgaat 468



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 344 aggaggtcgtcgtaggggtcgcggcggccg 373
           ||||| ||||||||||||||||| ||||||
Sbjct: 226 aggagatcgtcgtaggggtcgcgacggccg 255
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 539     tcctccatcagccgcaggatcagg 562
               ||||||||||||||||||||||||
Sbjct: 1092768 tcctccatcagccgcaggatcagg 1092745
to top
>dbj|AB189463.1| Rhodobacter sphaeroides f. sp. denitrificans treY gene for
           maltoologosyl trehalose synthase, complete cds
          Length = 2616

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 539 tcctccatcagccgcaggatcagg 562
           ||||||||||||||||||||||||
Sbjct: 890 tcctccatcagccgcaggatcagg 867
to top
>gb|AC117673.18| Mus musculus chromosome 1, clone RP23-390I1, complete sequence
          Length = 182102

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 163   gcacatgaaccagctagggcagttcaa 189
             |||||||||||||| ||||||||||||
Sbjct: 66821 gcacatgaaccagcaagggcagttcaa 66847
to top
>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete sequence
          Length = 191036

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 186484 cacatgaaccagcaagggcagttcaa 186509
to top
>ref|NG_000017.2| Homo sapiens protocadherin beta cluster (PCDHB@) on chromosome 5
          Length = 257923

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 84     aacaagacagaaaatcagcaga 105
              ||||||||||||||||||||||
Sbjct: 114312 aacaagacagaaaatcagcaga 114333
to top
>gb|AC166290.7| Mus musculus  BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 242055

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 164   cacatgaaccagctagggcagttcaa 189
             ||||||||||||| ||||||||||||
Sbjct: 58181 cacatgaaccagcaagggcagttcaa 58206
to top
>emb|AL807806.6| Mouse DNA sequence from clone RP23-67K19 on chromosome X, complete
             sequence
          Length = 128018

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 164   cacatgaaccagctagggcagttcaa 189
             ||||||||||||| ||||||||||||
Sbjct: 91437 cacatgaaccagcaagggcagttcaa 91412
to top
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete
              sequence
          Length = 220233

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 123087 cacatgaaccagcaagggcagttcaa 123062
to top
>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete
             sequence
          Length = 160122

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 164   cacatgaaccagctagggcagttcaa 189
             ||||||||||||| ||||||||||||
Sbjct: 31057 cacatgaaccagcaagggcagttcaa 31082
to top
>gb|BC066980.1| Homo sapiens chromosome 5 open reading frame 25, mRNA (cDNA clone
           MGC:87612 IMAGE:4821958), complete cds
          Length = 1939

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 319 cggggcggggccggcgtggcgg 340
           ||||||||||||||||||||||
Sbjct: 4   cggggcggggccggcgtggcgg 25
to top
>gb|BC037298.1| Homo sapiens chromosome 5 open reading frame 25, mRNA (cDNA clone
           MGC:33586 IMAGE:4823991), complete cds
          Length = 3591

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 319 cggggcggggccggcgtggcgg 340
           ||||||||||||||||||||||
Sbjct: 12  cggggcggggccggcgtggcgg 33
to top
>gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosome 19, complete sequence
          Length = 146015

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 131851 cacatgaaccagcaagggcagttcaa 131826
to top
>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence
          Length = 212387

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 177334 cacatgaaccagcaagggcagttcaa 177359
to top
>ref|NM_198567.1| Homo sapiens chromosome 5 open reading frame 25 (C5orf25), mRNA
          Length = 3591

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 319 cggggcggggccggcgtggcgg 340
           ||||||||||||||||||||||
Sbjct: 12  cggggcggggccggcgtggcgg 33
to top
>emb|AL731860.8| Mouse DNA sequence from clone RP23-367H4 on chromosome 11 Contains the
             5' end of the AF424697 gene for DNA sequence AF424697
             (FLJ21950, KIAA0903-like) and a CpG island, complete
             sequence
          Length = 119258

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 164   cacatgaaccagctagggcagttcaa 189
             ||||||||||||| ||||||||||||
Sbjct: 95672 cacatgaaccagcaagggcagttcaa 95647
to top
>gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, complete sequence
          Length = 193714

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 136463 cacatgaaccagcaagggcagttcaa 136488
to top
>gb|AC116427.1| Homo sapiens chromosome 5 clone CTD-2316N20, complete sequence
          Length = 103938

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 319   cggggcggggccggcgtggcgg 340
             ||||||||||||||||||||||
Sbjct: 44516 cggggcggggccggcgtggcgg 44495
to top
>dbj|AK138696.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430014J21 product:unclassifiable, full
           insert sequence
          Length = 1916

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 164 cacatgaaccagctagggcagttcaa 189
           ||||||||||||| ||||||||||||
Sbjct: 783 cacatgaaccagcaagggcagttcaa 758
to top
>gb|AC026400.4| Homo sapiens chromosome 5 clone CTB-173O12, complete sequence
          Length = 118469

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 319   cggggcggggccggcgtggcgg 340
             ||||||||||||||||||||||
Sbjct: 46774 cggggcggggccggcgtggcgg 46753
to top
>emb|BX005281.15| Mouse DNA sequence from clone RP23-268A11 on chromosome X, complete
             sequence
          Length = 60173

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 164   cacatgaaccagctagggcagttcaa 189
             ||||||||||||| ||||||||||||
Sbjct: 11569 cacatgaaccagcaagggcagttcaa 11594
to top
>gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, complete sequence
          Length = 173607

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 319   cggggcggggccggcgtggcgg 340
             ||||||||||||||||||||||
Sbjct: 86054 cggggcggggccggcgtggcgg 86075
to top
>gb|AC025436.2|AC025436 Homo sapiens chromosome 5 clone CTC-429E15, complete sequence
          Length = 184662

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 84     aacaagacagaaaatcagcaga 105
              ||||||||||||||||||||||
Sbjct: 160107 aacaagacagaaaatcagcaga 160128
to top
>gb|AC005754.1|AC005754 Homo sapiens chromosome 5, BAC clone 34j15 (LBNL H169), complete
             sequence
          Length = 125927

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 84    aacaagacagaaaatcagcaga 105
             ||||||||||||||||||||||
Sbjct: 32629 aacaagacagaaaatcagcaga 32608
to top
>emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chromosome X, complete
             sequence
          Length = 102565

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 164   cacatgaaccagctagggcagttcaa 189
             ||||||||||||| ||||||||||||
Sbjct: 23328 cacatgaaccagcaagggcagttcaa 23303
to top
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence
          Length = 236246

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 164  cacatgaaccagctagggcagttcaa 189
            ||||||||||||| ||||||||||||
Sbjct: 1808 cacatgaaccagcaagggcagttcaa 1833
to top
>emb|AL731814.13| Mouse DNA sequence from clone RP23-109J20 on chromosome 2, complete
              sequence
          Length = 210821

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 142309 cacatgaaccagcaagggcagttcaa 142334
to top
>gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, complete sequence
          Length = 224088

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 164    cacatgaaccagctagggcagttcaa 189
              ||||||||||||| ||||||||||||
Sbjct: 145740 cacatgaaccagcaagggcagttcaa 145715
to top
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195335

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    gtgtgcaatgagattattgaa 73
             |||||||||||||||||||||
Sbjct: 24387 gtgtgcaatgagattattgaa 24407
to top
>gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome 16, complete sequence
          Length = 191050

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 164   cacatgaaccagctagggcagttca 188
             ||||||||||||| |||||||||||
Sbjct: 63867 cacatgaaccagcaagggcagttca 63843
to top
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    aaatgagttctccttattttg 259
              |||||||||||||||||||||
Sbjct: 154872 aaatgagttctccttattttg 154852
to top
>emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on chromosome 1 Contains the
             3' end of the ADAM15 gene for a disintegrin and
             metalloproteinase domain 15 (metargidin), the EFNA4 gene
             for ephrin-A4, the EFNA3 gene for ephrin-A3, the EFNA1
             gene for ephrin-A1, the gene for a novel protein
             (LOC55974), the DPM3 gene for dolichyl-phosphate
             mannosyltransferase polypeptide 3 and four CpG islands,
             complete sequence
          Length = 92095

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cggggcggggccggcgtggcgggcg 343
             |||||||||||||||| ||||||||
Sbjct: 33754 cggggcggggccggcgcggcgggcg 33778
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 365     cggcggccggcggcctggctg 385
               |||||||||||||||||||||
Sbjct: 4112617 cggcggccggcggcctggctg 4112637
to top
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 333    cgtggcgggcgaggaggtcgt 353
              |||||||||||||||||||||
Sbjct: 220778 cgtggcgggcgaggaggtcgt 220758



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 333    cgtggcgggcgaggaggtcgt 353
              |||||||||||||||||||||
Sbjct: 212952 cgtggcgggcgaggaggtcgt 212932
to top
>gb|AC116993.2| Homo sapiens chromosome 1 clone RP4-561P1, complete sequence
          Length = 101893

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 393   ggtcccaggagagctgggagt 413
             |||||||||||||||||||||
Sbjct: 95645 ggtcccaggagagctgggagt 95625
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 328      gccggcgtggcgggcgaggaggtcg 352
                ||||||| |||||||||||||||||
Sbjct: 28525262 gccggcgaggcgggcgaggaggtcg 28525286
to top
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene
              cluster, partial sequence
          Length = 127559

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    acgaggaggacggggcggggc 329
              |||||||||||||||||||||
Sbjct: 127346 acgaggaggacggggcggggc 127326
to top
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
             sequence
          Length = 116443

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 239   aaatgagttctccttattttg 259
             |||||||||||||||||||||
Sbjct: 92343 aaatgagttctccttattttg 92363
to top
>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     gtgtgcaatgagattattgaa 73
              |||||||||||||||||||||
Sbjct: 110417 gtgtgcaatgagattattgaa 110437
to top
>gb|AC153896.10| Mus musculus 10 BAC RP23-114D16 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 206003

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 164   cacatgaaccagctagggcagttca 188
             ||||||||||||| |||||||||||
Sbjct: 76054 cacatgaaccagcaagggcagttca 76078
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 363     cgcggcggccggcggcctggc 383
               |||||||||||||||||||||
Sbjct: 3229216 cgcggcggccggcggcctggc 3229196
to top
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0532H03
          Length = 166128

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 328    gccggcgtggcgggcgaggaggtcg 352
              ||||||| |||||||||||||||||
Sbjct: 132295 gccggcgaggcgggcgaggaggtcg 132319
to top
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 328   gccggcgtggcgggcgaggaggtcg 352
             ||||||| |||||||||||||||||
Sbjct: 16740 gccggcgaggcgggcgaggaggtcg 16764
to top
>dbj|AK101257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032G23, full
           insert sequence
          Length = 2673

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 328 gccggcgtggcgggcgaggaggtcg 352
           ||||||| |||||||||||||||||
Sbjct: 111 gccggcgaggcgggcgaggaggtcg 87
to top
>ref|XM_524448.1| PREDICTED: Pan troglodytes zinc finger, SWIM domain containing 4
           (LOC469063), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 363 cgcggcggccggcggcctgg 382
           ||||||||||||||||||||
Sbjct: 825 cgcggcggccggcggcctgg 844
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 355    gtaggggtcgcggcggccggcggc 378
              ||||||||||||||||||| ||||
Sbjct: 546159 gtaggggtcgcggcggccgccggc 546182
to top
>ref|XM_882793.1| PREDICTED: Bos taurus hypothetical protein LOC617405 (LOC617405),
           mRNA
          Length = 780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 507 gcgcccgctgcgcctcgtcccgctgctc 534
           ||||||||||| |||| |||||||||||
Sbjct: 210 gcgcccgctgctcctcctcccgctgctc 237
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 355     gtaggggtcgcggcggccggcggc 378
               ||||||||||||||||||| ||||
Sbjct: 3228930 gtaggggtcgcggcggccgccggc 3228907
to top
>ref|NM_023072.1| Homo sapiens zinc finger, SWIM-type containing 4 (ZSWIM4), mRNA
          Length = 4340

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 363  cgcggcggccggcggcctgg 382
            ||||||||||||||||||||
Sbjct: 2571 cgcggcggccggcggcctgg 2590
to top
>gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence
          Length = 219369

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    gaggaggacggggcggggcc 330
              ||||||||||||||||||||
Sbjct: 171943 gaggaggacggggcggggcc 171962
to top
>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence
          Length = 230218

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 166    catgaaccagctagggcagttcaa 189
              ||||||||||| ||||||||||||
Sbjct: 221300 catgaaccagcgagggcagttcaa 221323
to top
>gb|AC122039.4| Mus musculus BAC clone RP24-432H3 from chromosome 6, complete sequence
          Length = 169274

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    catgaaccagctagggcagttcaa 189
              ||||||||||| ||||||||||||
Sbjct: 149340 catgaaccagcgagggcagttcaa 149317
to top
>gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, complete sequence
          Length = 176188

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    gaggaggacggggcggggcc 330
              ||||||||||||||||||||
Sbjct: 150173 gaggaggacggggcggggcc 150154
to top
>ref|XM_759197.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0654) partial mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 caaggataaaatcgatgaaa 206
           ||||||||||||||||||||
Sbjct: 843 caaggataaaatcgatgaaa 862
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     cggcggccggcggcctggct 384
               ||||||||||||||||||||
Sbjct: 2756000 cggcggccggcggcctggct 2755981
to top
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ggccggcgtggcgggcgagg 346
              ||||||||||||||||||||
Sbjct: 309652 ggccggcgtggcgggcgagg 309671
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ggccggcgtggcgggcgagg 346
             ||||||||||||||||||||
Sbjct: 68952 ggccggcgtggcgggcgagg 68971
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ggccggcgtggcgggcgagg 346
              ||||||||||||||||||||
Sbjct: 147046 ggccggcgtggcgggcgagg 147065
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 355     gtaggggtcgcggcggccggcggc 378
               ||||||||||||||||||| ||||
Sbjct: 2958795 gtaggggtcgcggcggccgccggc 2958772
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   ggcgaggaggtcgtcgtagg 359
             ||||||||||||||||||||
Sbjct: 50004 ggcgaggaggtcgtcgtagg 49985
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    ggccggcggcctggctgatc 388
              ||||||||||||||||||||
Sbjct: 217060 ggccggcggcctggctgatc 217041
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>gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, complete sequence
          Length = 212426

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    cgaggaggacggggcggggccggc 333
              |||||||| |||||||||||||||
Sbjct: 100186 cgaggagggcggggcggggccggc 100209
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>gb|AC025264.16| Homo sapiens 12 BAC RP11-704P17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 193626

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   atgagttctccttattttgc 260
             ||||||||||||||||||||
Sbjct: 44823 atgagttctccttattttgc 44804
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>dbj|AK022283.1| Homo sapiens cDNA FLJ12221 fis, clone MAMMA1001091
          Length = 2122

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 363 cgcggcggccggcggcctgg 382
           ||||||||||||||||||||
Sbjct: 354 cgcggcggccggcggcctgg 373
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>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE),
             beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative
             methoxymalonyl-CoA synthase (sorC), reductase (sorR),
             soraphen polyketide synthase A (sorA), soraphen polyketide
             synthase B (sorB), O-methyltransferase (sorM),
             beta-mannanase, and xylanse-arabinofuranosidase
             bifunctional enzyme genes, complete cds; and unknown genes
          Length = 67523

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   tggcgggcgaggaggtcgtc 354
             ||||||||||||||||||||
Sbjct: 13674 tggcgggcgaggaggtcgtc 13655
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>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence
          Length = 214530

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   cgcggcggccggcggcctgg 382
             ||||||||||||||||||||
Sbjct: 43603 cgcggcggccggcggcctgg 43622
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>gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence
          Length = 191204

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   ggaagggaatgtaatcacag 227
             ||||||||||||||||||||
Sbjct: 64352 ggaagggaatgtaatcacag 64371
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>gb|BC102654.1| Bos taurus cDNA clone IMAGE:7956015, partial cds
          Length = 1186

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 507 gcgcccgctgcgcctcgtcccgctgctc 534
           ||||||||||| |||| |||||||||||
Sbjct: 40  gcgcccgctgctcctcctcccgctgctc 13
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>dbj|AK079280.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530080P11 product:RIKEN cDNA
           A930033L17 gene, full insert sequence
          Length = 1470

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 gtggcgggcgaggaggtcgt 353
           ||||||||||||||||||||
Sbjct: 244 gtggcgggcgaggaggtcgt 225
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 239      aaatgagttctccttatttt 258
                ||||||||||||||||||||
Sbjct: 22402955 aaatgagttctccttatttt 22402936
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>gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene
            cluster, downstream region
          Length = 10029

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 362  tcgcggcggccggcggcctg 381
            ||||||||||||||||||||
Sbjct: 7994 tcgcggcggccggcggcctg 7975
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>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete
             sequence
          Length = 145244

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    agcttcatggaacaagacagaaaa 97
             ||||||||||||||||| ||||||
Sbjct: 56331 agcttcatggaacaagatagaaaa 56308
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>dbj|AK024452.1| Homo sapiens mRNA for FLJ00044 protein, partial cds
          Length = 4340

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 363  cgcggcggccggcggcctgg 382
            ||||||||||||||||||||
Sbjct: 2571 cgcggcggccggcggcctgg 2590
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   aaatgagttctccttatttt 258
             ||||||||||||||||||||
Sbjct: 99938 aaatgagttctccttatttt 99919
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>ref|XM_310742.2| Anopheles gambiae str. PEST ENSANGP00000010052
           (ENSANGG00000007563), partial mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 572 aactccatgatgaatcccat 591
           ||||||||||||||||||||
Sbjct: 808 aactccatgatgaatcccat 827
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>gb|AC156791.1| Mus musculus BAC clone RP24-250L13 from 9, complete sequence
          Length = 165073

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     ggaacaagacagaaaatcag 101
              ||||||||||||||||||||
Sbjct: 150012 ggaacaagacagaaaatcag 150031
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>gb|AF136942.1|AF136942 Hordeum vulgare nicotianamine synthase 2 (nashor2) mRNA, complete
           cds
          Length = 1346

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 31/34 (91%), Gaps = 3/34 (8%)
 Strand = Plus / Minus

                                             
Query: 319 cggggcggggccgg---cgtggcgggcgaggagg 349
           ||||||||||||||   |||||||||||||||||
Sbjct: 509 cggggcggggccggggacgtggcgggcgaggagg 476
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>gb|AY772007.1| Nocardioides sp. JS614 putative PAPS reductase gene, partial cds;
             putative argininosuccinate lyase, putative
             1-aminocyclopropane-1-carboxylate deaminase, putative
             adenylosuccinate lyase, putative phosphosulfolactate
             synthase, putative oxidoreductase/dehydrogenase, putative
             short-chain dehydrogenase, putative acyl-CoA transferase,
             putative acyl-CoA synthetase, epoxyalkane: coenzyme M
             transferase (etnE), probable alkene monooxygenase beta
             subunit (etnA), probable alkene monooxygenase effector
             (etnB), probable alkene monooxygenase alpha subunit
             (etnC), probable alkene monooxygenase reductase,
             hypothetical proteins, putative dimethylsulfoxide
             reductase, hypothetical protein, putative TraA conjugation
             protein, hypothetical protein, putative ParB partitioning
             protein, and hypothetical proteins genes, complete cds;
             putative DNA integrase/recombinase gene, partial cds; and
             unknown gene
          Length = 34814

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   gtcgcggcggccggcggcct 380
             ||||||||||||||||||||
Sbjct: 26958 gtcgcggcggccggcggcct 26977
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>gb|AY675212.1| Oryzias latipes hypothetical protein mRNA, partial cds
          Length = 681

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 543 ccatcagccgcaggatcagg 562
           ||||||||||||||||||||
Sbjct: 173 ccatcagccgcaggatcagg 192


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,071,565
Number of Sequences: 3902068
Number of extensions: 5071565
Number of successful extensions: 117907
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 116218
Number of HSP's gapped (non-prelim): 1689
length of query: 696
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 673
effective length of database: 17,143,297,704
effective search space: 11537439354792
effective search space used: 11537439354792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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