ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15e05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071L22, full insert sequence Length = 2425 Score = 206 bits (104), Expect = 7e-50 Identities = 181/207 (87%) Strand = Plus / Minus Query: 486 ggctgcttggatttattctcctcagattcttcagctgagaaatgtgaatcaataaccact 545 ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| Sbjct: 2006 ggctgcttggatttagtctcctcgagttcttcagtggagaaatgtgaatcaataaccaca 1947 Query: 546 gttgtgaggtgctgcttgagatagacagcagaaagcggctgccttgtatttgtatcccag 605 | ||| |||||||||||||| |||| ||||| ||| |||||||||||||||| |||||| Sbjct: 1946 gctgtcaggtgctgcttgaggaagaccgcagagagcagctgccttgtatttgtgtcccag 1887 Query: 606 attcgtaagtagctgtccaatccgcaagatgctatcaaaggcagctccggatgcctagct 665 || |||||||| ||||||| ||| ||||||||||||||||| ||||| ||||| ||| || Sbjct: 1886 atgcgtaagtaactgtccagtccacaagatgctatcaaaggtagctctggatgtctaact 1827 Query: 666 atcgacctaatacttncactgcattta 692 || || ||||||||| ||||||||||| Sbjct: 1826 atagatctaatacttccactgcattta 1800 Score = 60.0 bits (30), Expect = 1e-05 Identities = 80/97 (82%), Gaps = 6/97 (6%) Strand = Plus / Minus Query: 102 acttgttgcttcttgcttttctttttcgtgcctttgcttctttcgccggattcagatttt 161 ||||| ||||||||||||||||||||| | ||||||||| |||| | |||||||| Sbjct: 2192 acttgctgcttcttgcttttctttttcattcctttgcttttttcac------cagatttt 2139 Query: 162 attctctttgaggcatacatctcagcatcactgtcat 198 |||||||||||| | ||| |||| ||||||||||| Sbjct: 2138 tttctctttgaggtgtgcatttcagaatcactgtcat 2102
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 3e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 630 caagatgctatcaaaggcagctccggatgcctagctatcgacctaatacttncactgcat 689 ||||||||||||||||| ||||| ||||| ||| |||| || ||||||||| |||||||| Sbjct: 19179529 caagatgctatcaaaggtagctctggatgtctaactatagatctaatacttccactgcat 19179588 Query: 690 tta 692 ||| Sbjct: 19179589 tta 19179591 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 573 gcagaaagcggctgccttgtatttgtatcccagattcgtaagtagctgtcca 624 ||||| ||| |||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 19179316 gcagagagcagctgccttgtatttgtgtcccagatgcgtaagtaactgtcca 19179367 Score = 63.9 bits (32), Expect = 7e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 522 gagaaatgtgaatcaataaccactgttgtgaggtgctgcttgag 565 ||||||||||||||||||||||| | ||| |||||||||||||| Sbjct: 19178798 gagaaatgtgaatcaataaccacagctgtcaggtgctgcttgag 19178841 Score = 60.0 bits (30), Expect = 1e-05 Identities = 80/97 (82%), Gaps = 6/97 (6%) Strand = Plus / Plus Query: 102 acttgttgcttcttgcttttctttttcgtgcctttgcttctttcgccggattcagatttt 161 ||||| ||||||||||||||||||||| | ||||||||| |||| | |||||||| Sbjct: 19178303 acttgctgcttcttgcttttctttttcattcctttgcttttttcac------cagatttt 19178356 Query: 162 attctctttgaggcatacatctcagcatcactgtcat 198 |||||||||||| | ||| |||| ||||||||||| Sbjct: 19178357 tttctctttgaggtgtgcatttcagaatcactgtcat 19178393
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 71.9 bits (36), Expect = 3e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 630 caagatgctatcaaaggcagctccggatgcctagctatcgacctaatacttncactgcat 689 ||||||||||||||||| ||||| ||||| ||| |||| || ||||||||| |||||||| Sbjct: 102924 caagatgctatcaaaggtagctctggatgtctaactatagatctaatacttccactgcat 102983 Query: 690 tta 692 ||| Sbjct: 102984 tta 102986 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 573 gcagaaagcggctgccttgtatttgtatcccagattcgtaagtagctgtcca 624 ||||| ||| |||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 102711 gcagagagcagctgccttgtatttgtgtcccagatgcgtaagtaactgtcca 102762 Score = 63.9 bits (32), Expect = 7e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 522 gagaaatgtgaatcaataaccactgttgtgaggtgctgcttgag 565 ||||||||||||||||||||||| | ||| |||||||||||||| Sbjct: 102193 gagaaatgtgaatcaataaccacagctgtcaggtgctgcttgag 102236 Score = 60.0 bits (30), Expect = 1e-05 Identities = 80/97 (82%), Gaps = 6/97 (6%) Strand = Plus / Plus Query: 102 acttgttgcttcttgcttttctttttcgtgcctttgcttctttcgccggattcagatttt 161 ||||| ||||||||||||||||||||| | ||||||||| |||| | |||||||| Sbjct: 101698 acttgctgcttcttgcttttctttttcattcctttgcttttttcac------cagatttt 101751 Query: 162 attctctttgaggcatacatctcagcatcactgtcat 198 |||||||||||| | ||| |||| ||||||||||| Sbjct: 101752 tttctctttgaggtgtgcatttcagaatcactgtcat 101788
>gb|AC104554.7| Mus musculus chromosome 5, clone RP24-441E22, complete sequence Length = 176408 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 16 tacttaaaaggcattcttttacaaatt 42 ||||||||||||||||||||| ||||| Sbjct: 78852 tacttaaaaggcattcttttaaaaatt 78878
>gb|AC040927.18| Mus musculus chromosome 5, clone RP23-186A21, complete sequence Length = 206156 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 16 tacttaaaaggcattcttttacaaatt 42 ||||||||||||||||||||| ||||| Sbjct: 39629 tacttaaaaggcattcttttaaaaatt 39655
>ref|XM_624969.1| PREDICTED: Apis mellifera similar to CG1676-PA (LOC552594), mRNA Length = 2001 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 111 ttcttgcttttctttttcgtgcctttgcttctttc 145 ||||| |||||||||||||| |||| ||||||||| Sbjct: 328 ttctttcttttctttttcgttccttagcttctttc 294
>gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, complete sequence Length = 189215 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 435 ttcttcttttccttctttgccct 457 ||||||||||||||||||||||| Sbjct: 82636 ttcttcttttccttctttgccct 82614
>emb|AL031285.1|HS58A9 Human DNA sequence from clone RP1-58A9 on chromosome 1q24.1-24.3 Contains STSs, GSSs, genomic marker D1S210 and a ca repeat polymorphism, complete sequence Length = 126347 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 attcagattttattctctttga 172 |||||||||||||||||||||| Sbjct: 11024 attcagattttattctctttga 11045
>gb|U00068.1| Caenorhabditis elegans cosmid W04D12, complete sequence Length = 5955 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 ttcttcttttccttctttgcc 455 ||||||||||||||||||||| Sbjct: 492 ttcttcttttccttctttgcc 472
>emb|CR382386.8| Zebrafish DNA sequence from clone DKEY-111O10 in linkage group 14, complete sequence Length = 162528 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 agattcttcagctgagaaatg 529 ||||||||||||||||||||| Sbjct: 97059 agattcttcagctgagaaatg 97079
>gb|AC005060.3| Homo sapiens BAC clone CTB-86D3 from 7, complete sequence Length = 120169 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ttgcttcttgcttttcttttt 127 ||||||||||||||||||||| Sbjct: 5314 ttgcttcttgcttttcttttt 5294
>emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chromosome 11, complete sequence Length = 124112 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 ttgttgcttcttgcttttctt 124 ||||||||||||||||||||| Sbjct: 44172 ttgttgcttcttgcttttctt 44152
>emb|BX323012.5| Zebrafish DNA sequence from clone DKEYP-46F3, complete sequence Length = 175238 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 agattcttcagctgagaaatg 529 ||||||||||||||||||||| Sbjct: 64758 agattcttcagctgagaaatg 64738
>dbj|AK084616.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330021P03 product:unclassifiable, full insert sequence Length = 3959 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 ttgttgcttcttgcttttctt 124 ||||||||||||||||||||| Sbjct: 2489 ttgttgcttcttgcttttctt 2469
>ref|NM_065858.1| Caenorhabditis elegans W04D12.1 (W04D12.1) mRNA, complete cds Length = 258 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 ttcttcttttccttctttgcc 455 ||||||||||||||||||||| Sbjct: 185 ttcttcttttccttctttgcc 165
>emb|AL929336.12| Zebrafish DNA sequence from clone CH211-163J21, complete sequence Length = 156284 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 agattcttcagctgagaaatg 529 ||||||||||||||||||||| Sbjct: 10342 agattcttcagctgagaaatg 10362
>gb|AC123703.8| Mus musculus chromosome 3, clone RP23-345N18, complete sequence Length = 197442 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 ttctcctcagattcttcagc 520 |||||||||||||||||||| Sbjct: 25513 ttctcctcagattcttcagc 25532
>gb|BC073182.1| Xenopus laevis cDNA clone IMAGE:5154704, containing frame-shift errors Length = 1732 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ttgcttcttgcttttctttt 126 |||||||||||||||||||| Sbjct: 854 ttgcttcttgcttttctttt 835
>gb|AE006847.1| Sulfolobus solfataricus P2 section 206 of 272 of the complete genome Length = 13274 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 4961 cttcctcatcctcttcaacc 4980
>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence Length = 144240 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 acttgttgcttcttgcttttcttt 125 |||| ||||||||||||||||||| Sbjct: 68815 actttttgcttcttgcttttcttt 68792
>ref|XR_003026.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC630453), mRNA Length = 645 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 601 cttcctcatcctcttcaacc 582
>ref|XR_001761.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC630453), mRNA Length = 645 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 601 cttcctcatcctcttcaacc 582
>ref|XR_004715.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC630453), mRNA Length = 645 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 601 cttcctcatcctcttcaacc 582
>gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, complete sequence Length = 159624 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cttcttttccttctttgccc 456 |||||||||||||||||||| Sbjct: 129337 cttcttttccttctttgccc 129318
>gb|AC069008.6| Homo sapiens BAC clone RP11-815N20 from 7, complete sequence Length = 90252 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttttacaaattcacaagg 49 |||||||||||||||||||| Sbjct: 8808 tcttttacaaattcacaagg 8827
>gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, complete sequence Length = 152654 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 113907 attttattctctttgaggca 113926
>emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 map Xq28, complete sequence Length = 262483 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 6559 attttattctctttgaggca 6578
>gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, complete sequence Length = 213500 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 42842 attttattctctttgaggca 42861
>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aaaggcattcttttacaaat 41 |||||||||||||||||||| Sbjct: 52514 aaaggcattcttttacaaat 52533
>gb|AC002519.1|HUAC002519 Human Chromosome 16 BAC clone CIT987SK-A-355G7, complete sequence Length = 139958 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 2080 attttattctctttgaggca 2099
>gb|AC119035.5| Homo sapiens 3 BAC RP11-445E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170181 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 ttcttcttttccttctttgccctt 458 ||||||||||||||||||| |||| Sbjct: 10326 ttcttcttttccttctttgtcctt 10303
>gb|AC125177.4| Mus musculus BAC clone RP23-315H8 from chromosome 8, complete sequence Length = 217567 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tcttcttttccttctttgcc 455 |||||||||||||||||||| Sbjct: 85187 tcttcttttccttctttgcc 85206
>gb|AC114918.4| Mus musculus BAC clone RP23-86N20 from 5, complete sequence Length = 165767 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ttacaaattcacaaggcaag 53 |||||||||||||||||||| Sbjct: 109119 ttacaaattcacaaggcaag 109138
>gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, complete sequence Length = 152119 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 113696 attttattctctttgaggca 113715
>gb|AC000117.1| Homo sapiens BAC clone CTB-62A19 from 7, complete sequence Length = 110384 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 aaccaatacattcttctttt 444 |||||||||||||||||||| Sbjct: 99072 aaccaatacattcttctttt 99053
>gb|AC011992.3| Homo sapiens BAC clone CTD-2327A23 from 7, complete sequence Length = 80515 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 79885 attttattctctttgaggca 79904
>gb|AC091770.5| Homo sapiens BAC clone RP11-655M5 from 7, complete sequence Length = 93543 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 1370 attttattctctttgaggca 1389
>gb|AC069285.8| Homo sapiens BAC clone RP11-196D18 from 7, complete sequence Length = 175952 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 121091 attttattctctttgaggca 121110
>gb|AC003084.1| Homo sapiens BAC clone CTB-84D4 from 7, complete sequence Length = 166219 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 53187 attttattctctttgaggca 53168
>gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, complete sequence Length = 142598 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cttcttttccttctttgccc 456 |||||||||||||||||||| Sbjct: 31983 cttcttttccttctttgccc 31964
>gb|AC145819.1| Pan troglodytes BAC clone RP43-99J22 from 7, complete sequence Length = 159950 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 52725 attttattctctttgaggca 52706
>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence Length = 127731 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tgttgcttcttgcttttctt 124 |||||||||||||||||||| Sbjct: 60821 tgttgcttcttgcttttctt 60840
>emb|Z82205.1|HS363L9 Human DNA sequence from clone RP3-363L9 on chromosome X Contains a N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) (NAT5) pseudogene, complete sequence Length = 125971 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 3247 attttattctctttgaggca 3266
>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three novel pseudogenes, the gene for a novel protein similar to ankyrin repeat domain 20A (ANKRD20A), the gene for a novel protein similar to Ankyrin repeat domain protein 18A (LOC441424), a pseudogene similar to part of cytochrome P450 family protein, a novel zinc finger pseudogene and a CpG island, complete sequence Length = 161157 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 151429 attttattctctttgaggca 151410
>emb|CR387988.4| Human DNA sequence from clone RP11-266E16 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L10 (RPL10), complete sequence Length = 30540 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 9636 attttattctctttgaggca 9617
>emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), complete sequence Length = 171101 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 156559 attttattctctttgaggca 156540
>emb|AL603750.7| Human DNA sequence from clone RP11-33E12 on chromosome 1 Contains a novel gene (FLJ13815) and a CpG island, complete sequence Length = 63692 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 44874 attttattctctttgaggca 44893
>gb|DQ366718.1| Uncultured Prochlorococcus marinus clone ASNC612 genomic sequence Length = 41637 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tctttgaggcatacatctca 185 |||||||||||||||||||| Sbjct: 768 tctttgaggcatacatctca 749
>gb|DQ366712.1| Uncultured Prochlorococcus marinus clone ASNC1363 genomic sequence Length = 37759 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tctttgaggcatacatctca 185 |||||||||||||||||||| Sbjct: 26433 tctttgaggcatacatctca 26414
>emb|AL590866.9| Human DNA sequence from clone RP11-356B3 on chromosome 6, complete sequence Length = 76158 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 37781 attttattctctttgaggca 37800
>emb|AL590004.5| Human DNA sequence from clone RP1-140K8 on chromosome 6 Contains a putative novel gene, a 40S ribosomal protein S25 (RPS25) pseudogene, a high mobility group (nonhistone chromosomal) protein 14 (HMG14) pseudogene and a pseudogene similar to CREB/EP300 inhibitory protein 1 (CRI1), complete sequence Length = 107418 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccatctgagttccttcctca 227 |||||||||||||||||||| Sbjct: 81509 ccatctgagttccttcctca 81528
>emb|AL391873.15| Human DNA sequence from clone RP11-399N11 on chromosome 13, complete sequence Length = 161317 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 ttcttcttttccttctttgccctt 458 ||||||||||| |||||||||||| Sbjct: 42671 ttcttcttttctttctttgccctt 42648
>emb|AL445926.5| Human DNA sequence from clone RP11-439I6 on chromosome 9 Contains the 3' end of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 167253 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 5061 attttattctctttgaggca 5080
>emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on chromosome 9 Contains a novel gene similar to mouse 9130404H11Rik protein, the CER1 gene for cerberus 1 homolog, cysteine knot superfamily (Xenopus laevis) and the 3' end of a novel gene (FLJ25416), complete sequence Length = 143246 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 87815 attttattctctttgaggca 87796 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 71614 attttattctctttgaggca 71595
>emb|AL359964.9| Human DNA sequence from clone RP11-361B11 on chromosome Xq21.2-22.1, complete sequence Length = 56477 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tcagattttattctctttga 172 |||||||||||||||||||| Sbjct: 1150 tcagattttattctctttga 1131
>gb|AE014837.1| Plasmodium falciparum 3D7 chromosome 11 section 2 of 8 of the complete sequence Length = 257757 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcatcctcttcaaccaa 430 |||||||||||||||||||| Sbjct: 99838 tcctcatcctcttcaaccaa 99819
>emb|AL355379.5| Human DNA sequence from clone RP3-508D13 on chromosome 6 Contains a heat shock protein (DNAJ) pseudogene, complete sequence Length = 66269 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 5335 attttattctctttgaggca 5316
>emb|AL160399.13| Human DNA sequence from clone RP11-161N21 on chromosome 6, complete sequence Length = 126595 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 83140 attttattctctttgaggca 83159
>gb|AC091134.7| Homo sapiens chromosome 17, clone RP11-646F1, complete sequence Length = 156583 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 23124 attttattctctttgaggca 23143
>emb|AL135914.25| Human DNA sequence from clone RP1-56L9 on chromosome 6 Contains a novel gene, the SOD2 gene for superoxide dismutase 2, mitochondrial, a pseudogene similar to heterogenous nuclear ribonucleoprotein H, the gene for Wilms' tumor 1-associating protein (KIAA0105) (WTAP), the ACAT2 gene for acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase), the TCP1 gene for t-complex 1 (CCT1, Ccta, D6S230E), the 5' end of the MRPL18 gene for mitochondrial ribosomal protein L18, and 4 CpG islands, complete sequence Length = 165802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 46701 attttattctctttgaggca 46682
>emb|AL117380.28|HSJ749H19 Human DNA sequence from clone RP4-749H19 on chromosome 20q13.11-13.33 Contains ESTs, STSs, GSSs and a CpG island, complete sequence Length = 178473 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cattaaggtcagccatctga 215 |||||||||||||||||||| Sbjct: 102271 cattaaggtcagccatctga 102252
>gb|AY303680.1| Pisum sativum clone R06_1068 genomic sequence Length = 1068 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 atacatctcagcatcactgt 195 |||||||||||||||||||| Sbjct: 1050 atacatctcagcatcactgt 1031
>gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195231 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ttcttcagctgagaaatgtg 531 |||||||||||||||||||| Sbjct: 182319 ttcttcagctgagaaatgtg 182300
>gb|AC117454.5| Homo sapiens 3 BAC RP11-312P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125001 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 49528 attttattctctttgaggca 49509
>emb|AL121961.8|HSJ104A17 Human DNA sequence from clone RP1-104A17 on chromosome 6q12-13 Contains the 3' end of the gene for stromal membrane-associated protein SMAP1A and the 3' end of the B3GAT2 gene for beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) (GLCATS, KIAA1963), complete sequence Length = 84300 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 82467 attttattctctttgaggca 82486
>emb|AL109660.14|HSJ666F24 Human DNA sequence from clone RP4-666F24 on chromosome 1p13.1-13.3 Contains the TSHB gene for thyroid stimulating hormone (beta), the gene for tetraspan 2 (TSPAN-2), a novel gene and one CpG island, complete sequence Length = 139563 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 506 ctcagattcttcagctgagaaatgtgaa 533 ||||||||||||||||| ||||| |||| Sbjct: 65305 ctcagattcttcagctgtgaaatatgaa 65278
>emb|AL096817.12|HSJ102H19 Human DNA sequence from clone RP1-102H19 on chromosome 6q15-16.1 Contains an HSP60 (TCP-1/cpn60 chaperonin family) pseudogene and parts of 5 novel genes, complete sequence Length = 103740 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 7525 attttattctctttgaggca 7506
>emb|AL050401.5|HSJ519P24 Human DNA sequence from clone RP3-519P24 on chromosome Xq22.1-23 Contains part of the IL1RAPL2 gene for interleukin 1 receptor accessory protein-like 2 and a prohibitin (PHB) pseudogene, complete sequence Length = 112203 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 19593 attttattctctttgaggca 19574
>emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on chromosome 6q12, complete sequence Length = 158204 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 114821 attttattctctttgaggca 114840
>emb|AL035459.6|HS81G23 Human DNA sequence from clone RP1-81G23 on chromosome 20q12 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T, ESTs, STS and GSSs, complete sequence Length = 50348 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 18326 attttattctctttgaggca 18307
>gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, complete sequence Length = 155916 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 ttctcctcagattcttcagc 520 |||||||||||||||||||| Sbjct: 79217 ttctcctcagattcttcagc 79236
>emb|AL022575.1|HS159A15 Human DNA sequence from clone RP1-159A15 on chromosome X Contains the 3' end of a novel gene, complete sequence Length = 71934 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 17935 attttattctctttgaggca 17916
>gb|AC068797.29| Homo sapiens 12 BAC RP1-81P11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136257 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 33626 attttattctctttgaggca 33607
>gb|AC115097.6| Homo sapiens chromosome 11, clone CTD-2532J14, complete sequence Length = 132923 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 427 ccaatacattcttcttttccttctttgc 454 ||||||||| | |||||||||||||||| Sbjct: 50706 ccaatacatgcgtcttttccttctttgc 50733
>emb|AL773537.4| Human DNA sequence from clone RP11-268E1 on chromosome 9 Contains three novel pseudogene, a novel gene, a pseudogene similar to part ofribosomal protein L10 (QM, NOV, DXS648, DXS648E, FLJ23544) (RPL10) and a CpG island, complete sequence Length = 166231 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 97202 attttattctctttgaggca 97221
>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence Length = 190902 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 121184 attttattctctttgaggca 121203
>dbj|BS000653.1| Pan troglodytes chromosome Y clone:PTB-017B13, complete sequences Length = 157263 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 4617 attttattctctttgaggca 4598
>dbj|BS000540.1| Pan troglodytes chromosome Y clone:PTB-144P03, complete sequences Length = 171424 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 78202 attttattctctttgaggca 78183
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 14799843 attttattctctttgaggca 14799862
>emb|CR589927.1| Human DNA sequence from clone WI2-620K10 on chromosome 1, complete sequence Length = 36909 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 27137 attttattctctttgaggca 27118
>gb|AC091938.2| Homo sapiens chromosome 5 clone RP11-329N11, complete sequence Length = 70122 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aagtcaataattccagcaga 85 |||||||||||||||||||| Sbjct: 34135 aagtcaataattccagcaga 34116
>gb|AC159027.3| Pan troglodytes BAC clone CH251-477J21 from chromosome unknown, complete sequence Length = 212323 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 65981 gcttctttcttttctttttcgtgc 65958
>gb|AC079460.19| Homo sapiens 12 BAC RP11-297L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175994 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 87733 attttattctctttgaggca 87714
>gb|AC105361.2| Homo sapiens chromosome , clone RP11-170D6, complete sequence Length = 160074 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 14814 attttattctctttgaggca 14795
>gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, complete sequence Length = 201218 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 6108 attttattctctttgaggca 6127
>gb|AC104166.2| Homo sapiens chromosome 3 clone RP11-199N21, complete sequence Length = 171705 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 89759 attttattctctttgaggca 89778
>gb|AC160654.3| Pan troglodytes BAC clone CH251-409B17 from chromosome unknown, complete sequence Length = 164127 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 58966 gcttctttcttttctttttcgtgc 58989
>gb|AC097515.5| Homo sapiens BAC clone RP11-446J8 from 4, complete sequence Length = 165973 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 152977 attttattctctttgaggca 152958
>gb|AC003059.16| Mouse Chromosome 10 BAC Clone 595c9, complete sequence Length = 236317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 213579 cttcctcatcctcttcaacc 213598
>gb|AF361253.1|AF361253 Equine rhinovirus 3 strain P313/75, complete genome Length = 8821 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gtttgactgaacttgtactt 20 |||||||||||||||||||| Sbjct: 2126 gtttgactgaacttgtactt 2107
>gb|AC021756.16| Mus musculus strain unknown chromosome 10 clone ct7-8a3, complete sequence Length = 132614 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 62512 cttcctcatcctcttcaacc 62531
>gb|AF426272.1|AF426272 Mus musculus csrp gene, intron 1B regulatory enhancer element Length = 4820 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 attcagattttattctcttt 170 |||||||||||||||||||| Sbjct: 4043 attcagattttattctcttt 4062
>gb|AC021856.7| Homo sapiens BAC clone RP11-553E5 from 4, complete sequence Length = 202507 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 24152 attttattctctttgaggca 24171
>gb|AC021146.7| Homo sapiens BAC clone RP11-468N14 from 4, complete sequence Length = 217991 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 127566 attttattctctttgaggca 127585
>gb|AC099328.2| Homo sapiens chromosome 3 clone RP11-62G11, complete sequence Length = 156066 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 140783 attttattctctttgaggca 140802
>gb|AC069304.7| Homo sapiens BAC clone RP11-632K21 from 7, complete sequence Length = 161247 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 78801 attttattctctttgaggca 78820
>gb|AC008550.5| Homo sapiens chromosome 5 clone CTC-507E12, complete sequence Length = 125406 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 38608 attttattctctttgaggca 38627
>gb|AC156632.2| Mus musculus BAC clone RP24-511E24 from chromosome 12, complete sequence Length = 173515 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 ttcttcttttccttctttgccctt 458 |||||||||||||||||| ||||| Sbjct: 110565 ttcttcttttccttctttcccctt 110542
>gb|AC010528.8|AC010528 Homo sapiens chromosome 16 clone RP11-150D5, complete sequence Length = 168172 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 139010 attttattctctttgaggca 138991
>gb|AF288742.1|AF288742 Homo sapiens oxysterol binding protein 2 (OSBP2) gene, complete cds Length = 217292 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tcttcttttccttctttgcc 455 |||||||||||||||||||| Sbjct: 164640 tcttcttttccttctttgcc 164659
>gb|U65397.2|HSU65397 Homo sapiens Yunnanese(a-gamma-delta-beta)O thalassemia deletion junction, 3' juxtaposed sequence Length = 2350 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 1280 attttattctctttgaggca 1261
>gb|BC097673.1| Xenopus laevis cDNA clone MGC:114989 IMAGE:5084937, complete cds Length = 1808 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ttgcttcttgcttttctttt 126 |||||||||||||||||||| Sbjct: 948 ttgcttcttgcttttctttt 929
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tgcttcttgcttttcttttt 127 |||||||||||||||||||| Sbjct: 42302 tgcttcttgcttttcttttt 42283
>gb|AC034105.7| Homo sapiens chromosome 16 clone RP11-170L3, complete sequence Length = 156484 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 11521 attttattctctttgaggca 11502
>gb|AC016749.4|AC016749 Homo sapiens clone RP11-504E20, complete sequence Length = 187117 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 28448 attttattctctttgaggca 28467
>gb|AC114733.4| Homo sapiens BAC clone RP13-1014F16 from 4, complete sequence Length = 51083 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 13205 attttattctctttgaggca 13186
>gb|AC097710.2| Homo sapiens BAC clone RP11-44H17 from 4, complete sequence Length = 156848 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 99184 attttattctctttgaggca 99165
>gb|AC104065.3| Homo sapiens BAC clone RP11-140E17 from 4, complete sequence Length = 77127 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 56027 attttattctctttgaggca 56046
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 1727207 attttattctctttgaggca 1727188
>dbj|AP000050.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 21/28, complete sequence Length = 114929 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 18937 gcttctttcttttctttttcgtgc 18914
>gb|AF289203.1|AF289203S1 Homo sapiens odorant receptor HOR3'beta1, odorant receptor HOR3'beta2, and odorant receptor HOR3'beta3 genes, complete cds Length = 36446 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 22558 attttattctctttgaggca 22539
>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence Length = 208477 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 198589 attttattctctttgaggca 198608
>emb|BX005194.11| Zebrafish DNA sequence from clone CH211-188A7 in linkage group 25, complete sequence Length = 151076 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ttgcttcttgcttttctttt 126 |||||||||||||||||||| Sbjct: 139665 ttgcttcttgcttttctttt 139646
>gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complete sequence Length = 166315 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 5176 attttattctctttgaggca 5195
>gb|AC009489.3|AC009489 Homo sapiens BAC clone RP11-339J4 from Y, complete sequence Length = 100953 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 48233 attttattctctttgaggca 48214
>gb|AC007040.2|AC007040 Homo sapiens BAC clone RP11-298H3 from 2, complete sequence Length = 181671 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttc 128 |||||||||||||||||||| Sbjct: 159828 gcttcttgcttttctttttc 159809
>gb|AC131055.10| Homo sapiens chromosome 17, clone RP11-846F4, complete sequence Length = 187223 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 38916 attttattctctttgaggca 38935
>gb|AC104648.2| Homo sapiens BAC clone RP11-45D4 from 2, complete sequence Length = 112084 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 39220 attttattctctttgaggca 39201
>gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, complete sequence Length = 158329 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 127809 attttattctctttgaggca 127828
>gb|AC112187.2| Homo sapiens chromosome 5 clone RP11-269M20, complete sequence Length = 186165 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ttgcttcttgcttttctttt 126 |||||||||||||||||||| Sbjct: 11450 ttgcttcttgcttttctttt 11469
>gb|AC129505.8| Homo sapiens chromosome 11, clone RP11-1205H24, complete sequence Length = 117817 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 55166 attttattctctttgaggca 55185
>gb|AC009046.4|AC009046 Homo sapiens chromosome 16 clone RP11-200H5, complete sequence Length = 153562 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 66755 attttattctctttgaggca 66774
>gb|AC154136.13| Mus musculus BAC RP23-184A3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 220233 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcctcatcctcttcaacc 428 |||||||||||||||||||| Sbjct: 59326 cttcctcatcctcttcaacc 59345
>emb|AJ515536.1|AHI515536 Antirrhinum hispanicum slf-S5 gene for S locus F-box (SLF)-S5 protein and slf-S5A gene for S locus F-box (SLF)-S5A protein Length = 71543 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atcaggatccaccatttgag 405 |||||||||||||||||||| Sbjct: 39377 atcaggatccaccatttgag 39396
>emb|AJ515535.1|AHI515535 Antirrhinum hispanicum slf-S1E gene for S locus F-box (SLF)-S1E protein and slf-S1 gene for S locus F-box (SLF)-S1 protein Length = 75183 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 atcaggatccaccatttgag 405 |||||||||||||||||||| Sbjct: 60830 atcaggatccaccatttgag 60811
>emb|AJ515534.1|AHI515534 Antirrhinum hispanicum slf-S4D, slf-S4A and slf-S4 genes Length = 54556 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atcaggatccaccatttgag 405 |||||||||||||||||||| Sbjct: 46759 atcaggatccaccatttgag 46778
>emb|BX640538.4| Human DNA sequence from clone RP6-238B6 on chromosome 1, complete sequence Length = 165731 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 8669 attttattctctttgaggca 8688
>dbj|BS000184.1| Pan troglodytes chromosome 22 clone:RP43-082O07, map 22, complete sequences Length = 171361 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 1621 gcttctttcttttctttttcgtgc 1598
>dbj|BS000183.1| Pan troglodytes chromosome 22 clone:PTB-086H16, map 22, partial sequences, complete sequence Length = 52814 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 52429 gcttctttcttttctttttcgtgc 52406
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tgcttcttgcttttcttttt 127 |||||||||||||||||||| Sbjct: 42302 tgcttcttgcttttcttttt 42283
>ref|XM_311948.2| Anopheles gambiae str. PEST ENSANGP00000010906 (ENSANGG00000008417), partial mRNA Length = 1557 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ttgcttcttgcttttctttt 126 |||||||||||||||||||| Sbjct: 651 ttgcttcttgcttttctttt 632
>gb|AC004542.1|AC004542 Homo sapiens PAC clone RP3-430N8 from 22q12.1-qter, complete sequence Length = 134914 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tcttcttttccttctttgcc 455 |||||||||||||||||||| Sbjct: 10832 tcttcttttccttctttgcc 10851
>emb|AL583842.40| Human DNA sequence from clone RP11-417J8 on chromosome 1, complete sequence Length = 195588 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 14220 attttattctctttgaggca 14239
>emb|X56106.1|SCYMR26 S.cerevisiae YMR26 gene for mitochondrial ribosomal protein YMR26 Length = 1449 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 ttcaaccaatacattcttcttttc 445 ||||| |||||||||||||||||| Sbjct: 193 ttcaatcaatacattcttcttttc 170
>emb|Z72862.1|SCYGR077C S.cerevisiae chromosome VII reading frame ORF YGR077c Length = 2194 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 ttcaaccaatacattcttcttttc 445 ||||| |||||||||||||||||| Sbjct: 365 ttcaatcaatacattcttcttttc 388
>dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, section 62/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 97698 gcttctttcttttctttttcgtgc 97675
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aataattccagcagaccaaa 90 |||||||||||||||||||| Sbjct: 332622 aataattccagcagaccaaa 332641
>dbj|AP002878.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-685I24, complete sequence Length = 108000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 28675 attttattctctttgaggca 28694
>gb|DQ332266.1| Synthetic construct Saccharomyces cerevisiae clone FLH201297.01X PEX8 gene, complete sequence Length = 1770 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 ttcaaccaatacattcttcttttc 445 ||||| |||||||||||||||||| Sbjct: 1572 ttcaatcaatacattcttcttttc 1549
>gb|BC082883.1| Xenopus laevis hypothetical LOC494773, mRNA (cDNA clone MGC:84113 IMAGE:6950137), complete cds Length = 1731 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ttccttcctcatcctcttca 425 |||||||||||||||||||| Sbjct: 906 ttccttcctcatcctcttca 887
>emb|AL953853.8| Mouse DNA sequence from clone RP23-6M16 on chromosome 2, complete sequence Length = 195971 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cagaagtcaataattccagcagac 86 |||||||||| ||||||||||||| Sbjct: 83068 cagaagtcaagaattccagcagac 83091
>emb|BX119317.2| Human DNA sequence from clone RP5-875J12 on chromosome 1, complete sequence Length = 40176 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 34409 attttattctctttgaggca 34390
>emb|AL845298.5| Mouse DNA sequence from clone RP23-280N11 on chromosome 2, complete sequence Length = 213826 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tacttaaaaggcattctttt 35 |||||||||||||||||||| Sbjct: 21688 tacttaaaaggcattctttt 21669
>emb|AL132827.2|CNS01DTP Human chromosome 14 DNA sequence BAC C-2149C7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 138016 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ttgcttcttgcttttctttt 126 |||||||||||||||||||| Sbjct: 103559 ttgcttcttgcttttctttt 103540
>gb|AC162441.11| Mus musculus chromosome 1, clone RP23-2E23, complete sequence Length = 225487 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 attcagattttattctcttt 170 |||||||||||||||||||| Sbjct: 144432 attcagattttattctcttt 144413
>dbj|AP000193.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 20/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 55524 gcttctttcttttctttttcgtgc 55501
>dbj|AP000311.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:130N6, complete sequence Length = 125242 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 118937 gcttctttcttttctttttcgtgc 118914
>dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 2 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aataattccagcagaccaaa 90 |||||||||||||||||||| Sbjct: 132622 aataattccagcagaccaaa 132641
>dbj|AP000117.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 20/20 Length = 151516 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcttcttgcttttctttttcgtgc 132 ||||||| |||||||||||||||| Sbjct: 55524 gcttctttcttttctttttcgtgc 55501
>dbj|AP002381.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-475M20, complete sequence Length = 203868 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attttattctctttgaggca 176 |||||||||||||||||||| Sbjct: 162745 attttattctctttgaggca 162726 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,125,484 Number of Sequences: 3902068 Number of extensions: 7125484 Number of successful extensions: 186387 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 185663 Number of HSP's gapped (non-prelim): 724 length of query: 692 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 669 effective length of database: 17,143,297,704 effective search space: 11468866163976 effective search space used: 11468866163976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
