| Clone Name | rbags15d20 |
|---|---|
| Clone Library Name | barley_pub |
>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 216 bits (551), Expect = 4e-56 Identities = 110/146 (75%), Positives = 122/146 (83%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPL 485 EI+ QLNLS +D+VRLLHSLSCAKYKIL KEP +T+S ND+FEFNSKFTDRMRRIKIPL Sbjct: 593 EILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL 652 Query: 484 PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIK 305 PP DRRYAIDA+IVRIMKSRKV+ H QLV+ECVEQLSRMFKPD KAIK Sbjct: 653 PPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 712 Query: 304 KRIEDLITRDYLERDKDNANTYRYLA 227 KR+EDLITRDYLERDK+N N +RYLA Sbjct: 713 KRMEDLITRDYLERDKENPNMFRYLA 738
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 117 bits (292), Expect = 4e-26 Identities = 65/152 (42%), Positives = 83/152 (54%), Gaps = 6/152 (3%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIP- 488 EI+ + N+ D+ R L SL+CAKYKIL K+P GR ++ D F FN F + RIKI Sbjct: 634 EILEKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKIST 693 Query: 487 -----LPPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKP 323 + R++ DA IVR+MK RKV H QL+AE QL+ F P Sbjct: 694 VAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHP 753 Query: 322 DFKAIKKRIEDLITRDYLERDKDNANTYRYLA 227 IK+RIE LI R+YL+R DN Y YLA Sbjct: 754 SPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)| Length = 659 Score = 109 bits (272), Expect = 8e-24 Identities = 64/150 (42%), Positives = 82/150 (54%), Gaps = 4/150 (2%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKI-- 491 EI + D ++ R L SL+C K ++L K P G+ + D F FN +F ++ RIKI Sbjct: 512 EIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQ 571 Query: 490 --PLPPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDF 317 DR+Y IDA+IVRIMK RK + H LV+E QL KP Sbjct: 572 IQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG- 630 Query: 316 KAIKKRIEDLITRDYLERDKDNANTYRYLA 227 +KKRIE LI RDY+ERDKDN N Y Y+A Sbjct: 631 -DLKKRIESLIDRDYMERDKDNPNQYHYVA 659
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 106 bits (264), Expect = 7e-23 Identities = 63/150 (42%), Positives = 82/150 (54%), Gaps = 4/150 (2%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPL 485 EI + D ++ R L SL+C K ++L+K P G+ I D F N F ++ RIKI Sbjct: 748 EIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQ 807 Query: 484 ----PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDF 317 DR+Y IDA+IVRIMK RK ++H LV+E QL KP Sbjct: 808 IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP-- 865 Query: 316 KAIKKRIEDLITRDYLERDKDNANTYRYLA 227 +KKRIE LI RDY+ERDK+N N Y Y+A Sbjct: 866 ADLKKRIESLIDRDYMERDKENPNQYNYIA 895
>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)| Length = 768 Score = 97.8 bits (242), Expect = 3e-20 Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 8/154 (5%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAK--YKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKI 491 EI + ++ + ++VR L SL+C K ++L+KEP + I F N +FT ++ R+KI Sbjct: 615 EIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKI 674 Query: 490 PLPPXXXXXX------XXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMF 329 DR++ I+A+IVRIMKSRK M H LVAE +QL F Sbjct: 675 QTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARF 734 Query: 328 KPDFKAIKKRIEDLITRDYLERDKDNANTYRYLA 227 P IKKRIE LI R+YL R ++ Y Y+A Sbjct: 735 LPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)| Length = 768 Score = 97.4 bits (241), Expect = 3e-20 Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 8/154 (5%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAK--YKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKI 491 EI + ++ + ++VR L SL+C K ++L+KEP + I F N +FT ++ R+KI Sbjct: 615 EIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKI 674 Query: 490 PLPPXXXXXX------XXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMF 329 DR++ I+A+IVRIMKSRK M H LVAE +QL F Sbjct: 675 QTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARF 734 Query: 328 KPDFKAIKKRIEDLITRDYLERDKDNANTYRYLA 227 P IKKRIE LI R+YL R ++ Y Y+A Sbjct: 735 LPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>CUL3_CAEEL (Q17391) Cullin-3| Length = 777 Score = 81.6 bits (200), Expect = 2e-15 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 8/154 (5%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAK--YKILSKEPAGR-TISPNDSFEFNSKFTDRMRRIK 494 +++ +L + + ++ R L SL+ K +IL ++ G+ I +D F N F ++ R+K Sbjct: 624 QLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVK 683 Query: 493 IPLPPXXXXXX-----XXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMF 329 + + DR+ ++A+IVRIMK+RK + H LVAE +QL F Sbjct: 684 VQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRF 743 Query: 328 KPDFKAIKKRIEDLITRDYLERDKDNANTYRYLA 227 P IK+RIE LI R+YL RD+ + Y+Y+A Sbjct: 744 MPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 78.2 bits (191), Expect = 2e-14 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 4/139 (2%) Frame = -2 Query: 643 LSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIP----LPPX 476 LSD D+ R L SLSCA+ + L P + SP+ F N KFTD++ R+KI Sbjct: 594 LSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYLKEER 653 Query: 475 XXXXXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRI 296 DR++ + ASIVR+MK ++ M H LV + + P +K I Sbjct: 654 QENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAI 713 Query: 295 EDLITRDYLERDKDNANTY 239 E L+ ++YLER+ ++ TY Sbjct: 714 EKLLEKEYLEREDNDIYTY 732
>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)| Length = 774 Score = 76.3 bits (186), Expect = 8e-14 Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 4/140 (2%) Frame = -2 Query: 634 DDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPLPPXXXXXXXX 455 ++++++L L K K+L+ +++P + E + ++ RRI I P Sbjct: 637 ENLIQVLQIL--LKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQ 694 Query: 454 XXXXXD----RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDL 287 R+ I A+IVRIMK RK + HT L++E + QLS FKP IKK I+ L Sbjct: 695 ETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDIL 754 Query: 286 ITRDYLERDKDNANTYRYLA 227 I ++YLER + + +TY YLA Sbjct: 755 IEKEYLERMEGHKDTYSYLA 774
>CUL4_CAEEL (Q17392) Cullin-4| Length = 840 Score = 73.2 bits (178), Expect = 7e-13 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 4/111 (3%) Frame = -2 Query: 547 NDSFEFNSKFTDRMRRIKIPLPPXXXXXXXXXXXX----XDRRYAIDASIVRIMKSRKVM 380 N+ F NSKFT++ R++I DR+Y IDA++VRIMK+RK + Sbjct: 732 NEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQL 791 Query: 379 AHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKDNANTYRYLA 227 H L+ E ++QL F IKKR+E LI R+Y+ RD + A++Y Y+A Sbjct: 792 NHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)| Length = 776 Score = 69.3 bits (168), Expect = 1e-11 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+ I A+IVRIMK RKV+ H QL+ E + QLS FKP IKK I+ LI ++YLER Sbjct: 707 RKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVD 766 Query: 256 DNANTYRYLA 227 +TY YLA Sbjct: 767 GEKDTYSYLA 776
>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)| Length = 776 Score = 69.3 bits (168), Expect = 1e-11 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+ I A+IVRIMK RKV+ H QL+ E + QLS FKP IKK I+ LI ++YLER Sbjct: 707 RKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVD 766 Query: 256 DNANTYRYLA 227 +TY YLA Sbjct: 767 GEKDTYSYLA 776
>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)| Length = 776 Score = 69.3 bits (168), Expect = 1e-11 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+ I A+IVRIMK RKV+ H QL+ E + QLS FKP IKK I+ LI ++YLER Sbjct: 707 RKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVD 766 Query: 256 DNANTYRYLA 227 +TY YLA Sbjct: 767 GEKDTYSYLA 776
>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)| Length = 745 Score = 69.3 bits (168), Expect = 1e-11 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPL 485 E+ +++ ++ + + SL K+++ + I SF N F+ + + KI Sbjct: 598 ELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITT 655 Query: 484 PPXXXX----XXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDF 317 DR+ + A+IVRIMK+RKV+ H L+ E + Q F P Sbjct: 656 SMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSI 715 Query: 316 KAIKKRIEDLITRDYLERDKDNANTYRYLA 227 IKK IE LI + Y+ER + +A+ Y Y+A Sbjct: 716 SMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)| Length = 745 Score = 69.3 bits (168), Expect = 1e-11 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPL 485 E+ +++ ++ + + SL K+++ + I SF N F+ + + KI Sbjct: 598 ELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITT 655 Query: 484 PPXXXX----XXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDF 317 DR+ + A+IVRIMK+RKV+ H L+ E + Q F P Sbjct: 656 SMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSI 715 Query: 316 KAIKKRIEDLITRDYLERDKDNANTYRYLA 227 IKK IE LI + Y+ER + +A+ Y Y+A Sbjct: 716 SMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)| Length = 745 Score = 69.3 bits (168), Expect = 1e-11 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPL 485 E+ +++ ++ + + SL K+++ + I SF N F+ + + KI Sbjct: 598 ELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITT 655 Query: 484 PPXXXX----XXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDF 317 DR+ + A+IVRIMK+RKV+ H L+ E + Q F P Sbjct: 656 SMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSI 715 Query: 316 KAIKKRIEDLITRDYLERDKDNANTYRYLA 227 IKK IE LI + Y+ER + +A+ Y Y+A Sbjct: 716 SMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 67.0 bits (162), Expect = 5e-11 Identities = 34/70 (48%), Positives = 47/70 (67%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+Y ++ +IVRIMK+RKV+ H LV E ++Q F PD IKK IEDLI + Y++R Sbjct: 708 RKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTD 767 Query: 256 DNANTYRYLA 227 N + Y+YLA Sbjct: 768 QN-DEYQYLA 776
>CUL6_CAEEL (Q21346) Cullin-6| Length = 729 Score = 63.9 bits (154), Expect = 4e-10 Identities = 33/70 (47%), Positives = 44/70 (62%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+Y I A IVRIMK+RK + HT L+ E + QL F P+ + IK IE LI + Y+ R + Sbjct: 660 RKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSE 719 Query: 256 DNANTYRYLA 227 + N Y YLA Sbjct: 720 NEHNVYEYLA 729
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 62.0 bits (149), Expect = 2e-09 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 4/150 (2%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIPL 485 E+ LS D + +L+ AK +L + PN +++ N F + R+++ L Sbjct: 622 ELAKITGLSTDFLTGILNIFLKAKVLLLGDND--KLGDPNSTYKINENFRMKKIRVQLNL 679 Query: 484 P----PXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDF 317 P DR+ + ++IVRIMK+R+ + H LV E ++Q+ F P Sbjct: 680 PIRSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKV 739 Query: 316 KAIKKRIEDLITRDYLERDKDNANTYRYLA 227 IK+ I+ LI ++YLER + Y YLA Sbjct: 740 SDIKQCIDMLIEKEYLER--QGRDEYIYLA 767
>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)| Length = 780 Score = 61.6 bits (148), Expect = 2e-09 Identities = 32/70 (45%), Positives = 44/70 (62%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+ I A IVRIMK+RK + H QL+ E + QLS FKP + IK+ I LI ++Y+ R + Sbjct: 711 RKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTE 770 Query: 256 DNANTYRYLA 227 + Y YLA Sbjct: 771 GQKDLYEYLA 780
>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)| Length = 780 Score = 57.8 bits (138), Expect = 3e-08 Identities = 29/63 (46%), Positives = 42/63 (66%) Frame = -2 Query: 415 SIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKDNANTYR 236 +I++IMK RK +++ QL E VE L MF P K IK++IE LI Y+ RD+ + NT+ Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 777 Query: 235 YLA 227 Y+A Sbjct: 778 YMA 780
>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 57.8 bits (138), Expect = 3e-08 Identities = 29/63 (46%), Positives = 42/63 (66%) Frame = -2 Query: 415 SIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKDNANTYR 236 +I++IMK RK +++ QL E VE L MF P K IK++IE LI Y+ RD+ + NT+ Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 777 Query: 235 YLA 227 Y+A Sbjct: 778 YMA 780
>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 57.0 bits (136), Expect = 5e-08 Identities = 29/63 (46%), Positives = 42/63 (66%) Frame = -2 Query: 415 SIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKDNANTYR 236 +I++IMK RK +++ QL E VE L MF P K IK++IE LI Y+ RD+ + NT+ Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777 Query: 235 YLA 227 Y+A Sbjct: 778 YMA 780
>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin| ligase complex SCF subunit CDC53) Length = 815 Score = 56.6 bits (135), Expect = 6e-08 Identities = 28/70 (40%), Positives = 44/70 (62%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R+ ++A IVRIMK+++ + HT LV EC+ Q + F +K+ I+ LI + YL+R Sbjct: 747 RQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRG- 805 Query: 256 DNANTYRYLA 227 D+ +Y YLA Sbjct: 806 DDGESYAYLA 815
>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/61 (45%), Positives = 40/61 (65%) Frame = -2 Query: 409 VRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKDNANTYRYL 230 ++IMK RK +++ QL E VE L MF P K IK++IE LI Y+ RD+ + NT+ Y+ Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYM 779 Query: 229 A 227 A Sbjct: 780 A 780
>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)| Length = 780 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/63 (44%), Positives = 42/63 (66%) Frame = -2 Query: 415 SIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDKDNANTYR 236 +I++IMK RK +++ QL E VE L MF P K IK+++E LI Y+ RD+ + NT+ Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFI 777 Query: 235 YLA 227 Y+A Sbjct: 778 YMA 780
>CUL5_CAEEL (Q23639) Cullin-5| Length = 741 Score = 54.3 bits (129), Expect = 3e-07 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = -2 Query: 436 RRYAIDASIVRIMKSRKVMAHTQLVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLERDK 257 R + IV+I+K+RK QL E VE L +F P+ K IK++I+ LI Y+ER Sbjct: 672 RELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRA 731 Query: 256 DNANTYRYLA 227 D+ NT+ Y++ Sbjct: 732 DDINTFVYIS 741
>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)| Length = 744 Score = 52.0 bits (123), Expect = 2e-06 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%) Frame = -2 Query: 664 EIVTQLNLSDDDVVRLLHSLSCA-KYKILSKEPAGRTISPNDSFEFNSKFTDRMRRIKIP 488 EI ++ DDV L+ S+S + KIL K + S N F N F+ R++K+P Sbjct: 593 EIYELTHIPIDDVKSLVMSMSTIPRCKILKKSSS----SGNMKFSVNYFFSSPNRKVKVP 648 Query: 487 L---PPXXXXXXXXXXXXXDRRY------AIDASIVRIMKSRKVMAHTQLVAECVEQLSR 335 + P Y + A IVRIMK+ ++H QL+ ++ Sbjct: 649 VIACPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQS 708 Query: 334 MFKPDFKAIKKRIEDLITRDYLERDKDNANTYRYLA 227 +K+ I+ LI ++Y++R+ D+ + Y YL+ Sbjct: 709 RLSLTPSILKRSIQLLIEKEYIQRNADDPSYYHYLS 744
>MEC10_CAEEL (P34886) Degenerin mec-10 (Mechanosensory abnormality protein 10)| Length = 724 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = +3 Query: 9 KXCKX*LVGYRGDSSNPELPTVSDDACTK*DQPGKIANRNPKNKLQASQQVLGARHGS-- 182 + C L+ R S+P P++ QP ++ N+N + L+ +G HGS Sbjct: 544 RTCFQELIIDRCGCSDPRFPSIGGV------QPCQVFNKNHRECLEKHTHQIGEIHGSFK 597 Query: 183 CHHQQACN 206 C QQ CN Sbjct: 598 CRCQQPCN 605 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,623,656 Number of Sequences: 219361 Number of extensions: 1713281 Number of successful extensions: 4788 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4613 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4775 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)