ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15d20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073A13, full insert sequence Length = 2869 Score = 470 bits (237), Expect = e-129 Identities = 372/417 (89%) Strand = Plus / Minus Query: 249 gcgttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttg 308 ||||||||||| || || || ||||||||||| |||||||| || || || | ||||||| Sbjct: 2436 gcgttgtccttctcgcgttccaggtaatcccttgtgatgaggtcctcgattcgcttcttg 2377 Query: 309 attgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagc 368 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2376 atggctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagc 2317 Query: 369 tgtgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgca 428 || |||| |||||||||||||||| ||||| || |||||||| ||||||||||||||| Sbjct: 2316 tgctgatggcccataactttgcgactcttcataatgcgcacaatcgatgcatcaattgca 2257 Query: 429 tacctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtagg 488 |||| || ||||||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 2256 taccgcctgtccttgtcaacatcttcgacaacctttttcttttcatcaacaggaggtagg 2197 Query: 489 ggtatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattg 548 |||||||| || ||||||||||||||||| ||||||||||||||||||||| ||| ||| Sbjct: 2196 ggtatcttaattcttctcatcctgtcagtgaattttgaattgaactcaaaaacatcgttg 2137 Query: 549 ggcgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagagaga 608 || ||||||| |||| ||||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 2136 ggagaaatagatctattagctggttccttgttaagaatcttgtattttgcacaggagaga 2077 Query: 609 gaatggagcaaacggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 |||||||||||||| || |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2076 gaatggagcaaacgcactacatcatcatctgataagtttagctgtgttacaatctca 2020 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gcatgtacaaaatgagaccag 104 ||||||||||||||||||||| Sbjct: 2650 gcatgtacaaaatgagaccag 2630
>dbj|AK061409.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B07, full insert sequence Length = 1189 Score = 454 bits (229), Expect = e-124 Identities = 371/417 (88%), Gaps = 1/417 (0%) Strand = Plus / Minus Query: 249 gcgttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttg 308 ||||||||||| || || || ||||||||||| |||||||| || || || | ||||||| Sbjct: 756 gcgttgtccttctcgcgttccaggtaatcccttgtgatgaggtcctcgattcgcttcttg 697 Query: 309 attgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagc 368 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 atggctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagc 637 Query: 369 tgtgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgca 428 || |||| |||||||||||||||| ||||| || |||||||| ||||||||||||||| Sbjct: 636 tgctgatggcccataactttgcgactcttcataatgcgcacaatcgatgcatcaattgca 577 Query: 429 tacctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtagg 488 |||| || ||||||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 576 taccgcctgtccttgtcaacatcttcgacaacctttttcttttcatcaacaggaggtagg 517 Query: 489 ggtatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattg 548 |||||||| || ||||||||||||||||| ||||||||||||||||||||| ||| ||| Sbjct: 516 ggtatcttaattcttctcatcctgtcagtgaattttgaattgaactcaaaaacatcgttg 457 Query: 549 ggcgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagagaga 608 || ||||||| |||| ||||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 456 ggagaaatagatctattagctggttccttgttaagaatcttgtattttgcacaggagaga 397 Query: 609 gaatggagcaaacggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 ||||||||| |||| || |||||||||||||| | ||| |||||||||||||||||| Sbjct: 396 gaatggagc-aacgcactacatcatcatctgataagtttagctgtgttacaatctca 341 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gcatgtacaaaatgagaccag 104 ||||||||||||||||||||| Sbjct: 970 gcatgtacaaaatgagaccag 950
>gb|AY106256.1| Zea mays PCO138766 mRNA sequence Length = 1503 Score = 391 bits (197), Expect = e-105 Identities = 350/401 (87%) Strand = Plus / Minus Query: 246 ttggcgttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttc 305 ||||||||||||||||| ||||| | || ||||| ||||||||||| |||||||||||| Sbjct: 1082 ttggcgttgtccttgtcgcgctccaaatagtcccttgtgatgagatcctcaatcctcttc 1023 Query: 306 ttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaact 365 || || ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 1022 tttatggctttgaagtccggcttaaacatgcggctaagctgctcaacacattcagcaacc 963 Query: 366 agctgtgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaatt 425 |||||| ||| ||||||||||||| || ||||| || ||||||||||||||||||||| Sbjct: 962 agctgttgatgacccataactttgcggctcttcataatgcgcacaattgatgcatcaatt 903 Query: 426 gcatacctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggt 485 |||||||||| ||| ||||||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 902 gcatacctcctgtctttgtcaacatcttcaacaacctttttcttctcatcaacgggaggc 843 Query: 486 aggggtatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatca 545 || || ||||| || |||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 842 agtggaatcttaattcttctcattctgtcagtaaattttgaattgaactcaaaaacatca 783 Query: 546 ttgggcgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagag 605 |||||||| || | ||||| ||| ||||| ||| |||| ||||||||||| |||||||| Sbjct: 782 ttgggcgagatggatctactagccggttccttgttaaggatcttgtattttgcacaagaa 723 Query: 606 agagaatggagcaaacggacaacatcatcatctgaaaggtt 646 || |||||||||||||| || |||||||||||||| ||||| Sbjct: 722 agtgaatggagcaaacgcactacatcatcatctgacaggtt 682
>ref|NM_193822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2199 Score = 260 bits (131), Expect = 5e-66 Identities = 344/415 (82%) Strand = Plus / Minus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 2172 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 2113 Query: 311 tgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagctg 370 ||| |||||||||||||| |||||||| | |||||||||||||||||| || || || Sbjct: 2112 tgccttgaagtcaggcttaaacatgcgtccaagctgctccacacattccatcacaagttg 2053 Query: 371 tgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgcata 430 ||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 2052 ctgatgacccaatactttgcgactcttcataatacgcacaattgatgcatcaattgcgta 1993 Query: 431 cctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtagggg 490 || || ||||| |||||||| ||||| || || ||||||||||| || ||||| || || Sbjct: 1992 tctgcgatccttatcaacatcttcaactactttcttcttctcatcaactggaggaagagg 1933 Query: 491 tatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattggg 550 |||||| | |||| || | |||||||||| ||||| |||||||| || |||||| || Sbjct: 1932 tatctttaatcttcgcagcttgtcagtaaactttgagttgaactcgaagacatcatttgg 1873 Query: 551 cgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagagagaga 610 ||||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1872 tgaaatagatctattatttggttctttgctaagaatcttgtattttgcacaagatagaga 1813 Query: 611 atggagcaaacggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 ||||||||| || ||||||||||||||||| || || | |||||| ||||||||| Sbjct: 1812 atggagcaatcgaacaacatcatcatctgagagatttaactgtgtcacaatctca 1758
>gb|AY336990.1| Oryza sativa (japonica cultivar-group) CUL1 mRNA, complete cds Length = 2478 Score = 260 bits (131), Expect = 5e-66 Identities = 344/415 (82%) Strand = Plus / Minus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 2292 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 2233 Query: 311 tgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagctg 370 ||| |||||||||||||| |||||||| | |||||||||||||||||| || || || Sbjct: 2232 tgccttgaagtcaggcttaaacatgcgtccaagctgctccacacattccatcacaagttg 2173 Query: 371 tgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgcata 430 ||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 2172 ctgatgacccaatactttgcgactcttcataatacgcacaattgatgcatcaattgcgta 2113 Query: 431 cctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtagggg 490 || || ||||| |||||||| ||||| || || ||||||||||| || ||||| || || Sbjct: 2112 tctgcgatccttatcaacatcttcaactactttcttcttctcatcaactggaggaagagg 2053 Query: 491 tatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattggg 550 |||||| | |||| || | |||||||||| ||||| |||||||| || |||||| || Sbjct: 2052 tatctttaatcttcgcagcttgtcagtaaactttgagttgaactcgaagacatcatttgg 1993 Query: 551 cgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagagagaga 610 ||||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1992 tgaaatagatctattatttggttctttgctaagaatcttgtattttgcacaagatagaga 1933 Query: 611 atggagcaaacggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 ||||||||| || ||||||||||||||||| || || | |||||| ||||||||| Sbjct: 1932 atggagcaatcgaacaacatcatcatctgagagatttaactgtgtcacaatctca 1878
>dbj|AK104340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G02, full insert sequence Length = 2950 Score = 260 bits (131), Expect = 5e-66 Identities = 344/415 (82%) Strand = Plus / Minus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 2349 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 2290 Query: 311 tgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagctg 370 ||| |||||||||||||| |||||||| | |||||||||||||||||| || || || Sbjct: 2289 tgccttgaagtcaggcttaaacatgcgtccaagctgctccacacattccatcacaagttg 2230 Query: 371 tgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgcata 430 ||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 2229 ctgatgacccaatactttgcgactcttcataatacgcacaattgatgcatcaattgcgta 2170 Query: 431 cctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtagggg 490 || || ||||| |||||||| ||||| || || ||||||||||| || ||||| || || Sbjct: 2169 tctgcgatccttatcaacatcttcaactactttcttcttctcatcaactggaggaagagg 2110 Query: 491 tatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattggg 550 |||||| | |||| || | |||||||||| ||||| |||||||| || |||||| || Sbjct: 2109 tatctttaatcttcgcagcttgtcagtaaactttgagttgaactcgaagacatcatttgg 2050 Query: 551 cgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagagagaga 610 ||||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2049 tgaaatagatctattatttggttctttgctaagaatcttgtattttgcacaagatagaga 1990 Query: 611 atggagcaaacggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 ||||||||| || ||||||||||||||||| || || | |||||| ||||||||| Sbjct: 1989 atggagcaatcgaacaacatcatcatctgagagatttaactgtgtcacaatctca 1935
>dbj|AK064940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P07, full insert sequence Length = 3029 Score = 260 bits (131), Expect = 5e-66 Identities = 344/415 (82%) Strand = Plus / Minus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 2401 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 2342 Query: 311 tgctttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagctg 370 ||| |||||||||||||| |||||||| | |||||||||||||||||| || || || Sbjct: 2341 tgccttgaagtcaggcttaaacatgcgtccaagctgctccacacattccatcacaagttg 2282 Query: 371 tgtatgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgcata 430 ||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 2281 ctgatgacccaatactttgcgactcttcataatacgcacaattgatgcatcaattgcgta 2222 Query: 431 cctccggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtagggg 490 || || ||||| |||||||| ||||| || || ||||||||||| || ||||| || || Sbjct: 2221 tctgcgatccttatcaacatcttcaactactttcttcttctcatcaactggaggaagagg 2162 Query: 491 tatcttgatccttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattggg 550 |||||| | |||| || | |||||||||| ||||| |||||||| || |||||| || Sbjct: 2161 tatctttaatcttcgcagcttgtcagtaaactttgagttgaactcgaagacatcatttgg 2102 Query: 551 cgaaatagttctaccagctggttctttgctaagaatcttgtatttcgcacaagagagaga 610 ||||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2101 tgaaatagatctattatttggttctttgctaagaatcttgtattttgcacaagatagaga 2042 Query: 611 atggagcaaacggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 ||||||||| || ||||||||||||||||| || || | |||||| ||||||||| Sbjct: 2041 atggagcaatcgaacaacatcatcatctgagagatttaactgtgtcacaatctca 1987
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 218 bits (110), Expect = 2e-53 Identities = 155/170 (91%) Strand = Plus / Plus Query: 326 cttgaacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataac 385 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 52934 cttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataac 52993 Query: 386 tttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtc 445 ||||||||| ||||| || |||||||| ||||||||||||||||||| || ||||||||| Sbjct: 52994 tttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtc 53053 Query: 446 aacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||| || || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 53054 aacatcttcgacaacctttttcttttcatcaacaggaggtaggggtatct 53103 Score = 192 bits (97), Expect = 1e-45 Identities = 148/165 (89%) Strand = Plus / Plus Query: 501 cttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagtt 560 ||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| | Sbjct: 53205 cttctcatcctgtcagtgaattttgaattgaactcaaaaacatcgttgggagaaatagat 53264 Query: 561 ctaccagctggttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaa 620 ||| ||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 53265 ctattagctggttccttgttaagaatcttgtattttgcacaggagagagaatggagcaaa 53324 Query: 621 cggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 || || |||||||||||||| | ||| |||||||||||||||||| Sbjct: 53325 cgcactacatcatcatctgataagtttagctgtgttacaatctca 53369 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 249 gcgttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttg 308 ||||||||||| || || || ||||||||||| |||||||| || || || | ||||||| Sbjct: 52568 gcgttgtccttctcgcgttccaggtaatcccttgtgatgaggtcctcgattcgcttcttg 52627 Query: 309 attgctttgaagtcaggct 327 || |||||||||||||||| Sbjct: 52628 atggctttgaagtcaggct 52646 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcatgtacaaaatgagaccag 104 ||||||||||||||||||||| Sbjct: 52354 gcatgtacaaaatgagaccag 52374
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 218 bits (110), Expect = 2e-53 Identities = 155/170 (91%) Strand = Plus / Minus Query: 326 cttgaacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataac 385 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 92964 cttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataac 92905 Query: 386 tttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtc 445 ||||||||| ||||| || |||||||| ||||||||||||||||||| || ||||||||| Sbjct: 92904 tttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtc 92845 Query: 446 aacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||| || || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 92844 aacatcttcgacaacctttttcttttcatcaacaggaggtaggggtatct 92795 Score = 192 bits (97), Expect = 1e-45 Identities = 148/165 (89%) Strand = Plus / Minus Query: 501 cttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagtt 560 ||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| | Sbjct: 92693 cttctcatcctgtcagtgaattttgaattgaactcaaaaacatcgttgggagaaatagat 92634 Query: 561 ctaccagctggttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaa 620 ||| ||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 92633 ctattagctggttccttgttaagaatcttgtattttgcacaggagagagaatggagcaaa 92574 Query: 621 cggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 || || |||||||||||||| | ||| |||||||||||||||||| Sbjct: 92573 cgcactacatcatcatctgataagtttagctgtgttacaatctca 92529 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 249 gcgttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttg 308 ||||||||||| || || || ||||||||||| |||||||| || || || | ||||||| Sbjct: 93330 gcgttgtccttctcgcgttccaggtaatcccttgtgatgaggtcctcgattcgcttcttg 93271 Query: 309 attgctttgaagtcaggct 327 || |||||||||||||||| Sbjct: 93270 atggctttgaagtcaggct 93252 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gcatgtacaaaatgagaccag 104 ||||||||||||||||||||| Sbjct: 93544 gcatgtacaaaatgagaccag 93524
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 218 bits (110), Expect = 2e-53 Identities = 155/170 (91%) Strand = Plus / Plus Query: 326 cttgaacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataac 385 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 2774608 cttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataac 2774667 Query: 386 tttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtc 445 ||||||||| ||||| || |||||||| ||||||||||||||||||| || ||||||||| Sbjct: 2774668 tttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtc 2774727 Query: 446 aacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||| || || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 2774728 aacatcttcgacaacctttttcttttcatcaacaggaggtaggggtatct 2774777 Score = 192 bits (97), Expect = 1e-45 Identities = 148/165 (89%) Strand = Plus / Plus Query: 501 cttctcatcctgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagtt 560 ||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| | Sbjct: 2774879 cttctcatcctgtcagtgaattttgaattgaactcaaaaacatcgttgggagaaatagat 2774938 Query: 561 ctaccagctggttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaa 620 ||| ||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 2774939 ctattagctggttccttgttaagaatcttgtattttgcacaggagagagaatggagcaaa 2774998 Query: 621 cggacaacatcatcatctgaaaggttcagctgtgttacaatctca 665 || || |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2774999 cgcactacatcatcatctgataagtttagctgtgttacaatctca 2775043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 249 gcgttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttg 308 ||||||||||| || || || ||||||||||| |||||||| || || || | ||||||| Sbjct: 2774242 gcgttgtccttctcgcgttccaggtaatcccttgtgatgaggtcctcgattcgcttcttg 2774301 Query: 309 attgctttgaagtcaggct 327 || |||||||||||||||| Sbjct: 2774302 atggctttgaagtcaggct 2774320 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcatgtacaaaatgagaccag 104 ||||||||||||||||||||| Sbjct: 2774028 gcatgtacaaaatgagaccag 2774048
>ref|NM_193824.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2241 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Minus Query: 315 ttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagctgtgta 374 |||| ||||||||| ||||||||||||||||||||||| |||||||| || || || | Sbjct: 2150 ttgatgtcaggcttaaacatgcggctgagctgctccacgcattccgctacaagttgctga 2091 Query: 375 tgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctc 434 ||| ||| ||||||||| ||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 2090 tggcccagaactttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctc 2031 Query: 435 cggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatc 494 | |||||||| ||||| || || ||||||||||||||||||| |||| || |||| | Sbjct: 2030 ctgtccttgttgacatcatcgacaacctttttcttctcatcgatttgaggaagtggtacc 1971 Query: 495 ttgatccttctcatcctgtcagtaaattttgaattgaactcaaa 538 || ||||||| |||||| || |||||||| |||||||||||||| Sbjct: 1970 ttaatccttcgcatcctatcggtaaatttggaattgaactcaaa 1927
>dbj|AK073477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D14, full insert sequence Length = 2634 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Minus Query: 315 ttgaagtcaggcttgaacatgcggctgagctgctccacacattccgcaactagctgtgta 374 |||| ||||||||| ||||||||||||||||||||||| |||||||| || || || | Sbjct: 2258 ttgatgtcaggcttaaacatgcggctgagctgctccacgcattccgctacaagttgctga 2199 Query: 375 tgggccataactttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctc 434 ||| ||| ||||||||| ||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 2198 tggcccagaactttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctc 2139 Query: 435 cggtccttgtcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatc 494 | |||||||| ||||| || || ||||||||||||||||||| |||| || |||| | Sbjct: 2138 ctgtccttgttgacatcatcgacaacctttttcttctcatcgatttgaggaagtggtacc 2079 Query: 495 ttgatccttctcatcctgtcagtaaattttgaattgaactcaaa 538 || ||||||| |||||| || |||||||| |||||||||||||| Sbjct: 2078 ttaatccttcgcatcctatcggtaaatttggaattgaactcaaa 2035
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 511 tgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagttctaccagctg 570 |||||||||| ||||| |||||||| || |||||| || ||||||| |||| | || Sbjct: 131080 tgtcagtaaactttgagttgaactcgaagacatcatttggtgaaatagatctattatttg 131139 Query: 571 gttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaacggacaacat 630 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 131140 gttctttgctaagaatcttgtattttgcacaagatagagaatggagcaatcgaacaacat 131199 Query: 631 catcatctgaaaggttcagctgtgttacaatctca 665 |||||||||| || || | |||||| ||||||||| Sbjct: 131200 catcatctgagagatttaactgtgtcacaatctca 131234 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 330 aacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataactttg 389 ||||||||||||||||||||||| |||||||| || || || |||| ||| ||||||| Sbjct: 149743 aacatgcggctgagctgctccacgcattccgctacaagttgctgatggcccagaactttg 149684 Query: 390 cgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtcaaca 449 || ||||||||||| ||||||| |||||||||||||| |||||| |||||||| ||| Sbjct: 149683 cggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttgttgaca 149624 Query: 450 tcctcaaccacctttttcttctcatcga 477 || || || ||||||||||||||||||| Sbjct: 149623 tcatcgacaacctttttcttctcatcga 149596 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 384 actttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttg 443 ||||||||||| ||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 130060 actttgcgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatcctta 130119 Query: 444 tcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||||| ||||| || || ||||||||||| || ||||| || ||||||| Sbjct: 130120 tcaacatcttcaactactttcttcttctcatcaactggaggaagaggtatct 130171 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 129558 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 129617 Query: 311 tgctttgaagtcaggct 327 ||| ||||||||||||| Sbjct: 129618 tgccttgaagtcaggct 129634 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 498 atccttctcatcctgtcagtaaattttgaattgaactcaaa 538 ||||||| |||||| || |||||||| |||||||||||||| Sbjct: 149499 atccttcgcatcctatcggtaaatttggaattgaactcaaa 149459
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 511 tgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagttctaccagctg 570 |||||||||| ||||| |||||||| || |||||| || ||||||| |||| | || Sbjct: 68689 tgtcagtaaactttgagttgaactcgaagacatcatttggtgaaatagatctattatttg 68748 Query: 571 gttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaacggacaacat 630 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 68749 gttctttgctaagaatcttgtattttgcacaagatagagaatggagcaatcgaacaacat 68808 Query: 631 catcatctgaaaggttcagctgtgttacaatctca 665 |||||||||| || || | |||||| ||||||||| Sbjct: 68809 catcatctgagagatttaactgtgtcacaatctca 68843 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 330 aacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataactttg 389 ||||||||||||||||||||||| |||||||| || || || |||| ||| ||||||| Sbjct: 87353 aacatgcggctgagctgctccacgcattccgctacaagttgctgatggcccagaactttg 87294 Query: 390 cgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtcaaca 449 || ||||||||||| ||||||| |||||||||||||| |||||| |||||||| ||| Sbjct: 87293 cggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttgttgaca 87234 Query: 450 tcctcaaccacctttttcttctcatcga 477 || || || ||||||||||||||||||| Sbjct: 87233 tcatcgacaacctttttcttctcatcga 87206 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 384 actttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttg 443 ||||||||||| ||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 67669 actttgcgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatcctta 67728 Query: 444 tcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||||| ||||| || || ||||||||||| || ||||| || ||||||| Sbjct: 67729 tcaacatcttcaactactttcttcttctcatcaactggaggaagaggtatct 67780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 67167 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 67226 Query: 311 tgctttgaagtcaggct 327 ||| ||||||||||||| Sbjct: 67227 tgccttgaagtcaggct 67243 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 498 atccttctcatcctgtcagtaaattttgaattgaactcaaa 538 ||||||| |||||| || |||||||| |||||||||||||| Sbjct: 87109 atccttcgcatcctatcggtaaatttggaattgaactcaaa 87069
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 511 tgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagttctaccagctg 570 |||||||||| ||||| |||||||| || |||||| || ||||||| |||| | || Sbjct: 15115028 tgtcagtaaactttgagttgaactcgaagacatcatttggtgaaatagatctattatttg 15115087 Query: 571 gttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaacggacaacat 630 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 15115088 gttctttgctaagaatcttgtattttgcacaagatagagaatggagcaatcgaacaacat 15115147 Query: 631 catcatctgaaaggttcagctgtgttacaatctca 665 |||||||||| || || | |||||| ||||||||| Sbjct: 15115148 catcatctgagagatttaactgtgtcacaatctca 15115182 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 330 aacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataactttg 389 ||||||||||||||||||||||| |||||||| || || || |||| ||| ||||||| Sbjct: 15133691 aacatgcggctgagctgctccacgcattccgctacaagttgctgatggcccagaactttg 15133632 Query: 390 cgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtcaaca 449 || ||||||||||| ||||||| |||||||||||||| |||||| |||||||| ||| Sbjct: 15133631 cggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttgttgaca 15133572 Query: 450 tcctcaaccacctttttcttctcatcga 477 || || || ||||||||||||||||||| Sbjct: 15133571 tcatcgacaacctttttcttctcatcga 15133544 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 384 actttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttg 443 ||||||||||| ||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 15114008 actttgcgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatcctta 15114067 Query: 444 tcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||||| ||||| || || ||||||||||| || ||||| || ||||||| Sbjct: 15114068 tcaacatcttcaactactttcttcttctcatcaactggaggaagaggtatct 15114119 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 15113506 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 15113565 Query: 311 tgctttgaagtcaggct 327 ||| ||||||||||||| Sbjct: 15113566 tgccttgaagtcaggct 15113582 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 498 atccttctcatcctgtcagtaaattttgaattgaactcaaa 538 ||||||| |||||| || |||||||| |||||||||||||| Sbjct: 15133447 atccttcgcatcctatcggtaaatttggaattgaactcaaa 15133407
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 511 tgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagttctaccagctg 570 |||||||||| ||||| |||||||| || |||||| || ||||||| |||| | || Sbjct: 141275 tgtcagtaaactttgagttgaactcgaagacatcatttggtgaaatagatctattatttg 141334 Query: 571 gttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaacggacaacat 630 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 141335 gttctttgctaagaatcttgtattttgcacaagatagagaatggagcaatcgaacaacat 141394 Query: 631 catcatctgaaaggttcagctgtgttacaatctca 665 |||||||||| || || | |||||| ||||||||| Sbjct: 141395 catcatctgagagatttaactgtgtcacaatctca 141429 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 384 actttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttg 443 ||||||||||| ||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 140255 actttgcgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatcctta 140314 Query: 444 tcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||||| ||||| || || ||||||||||| || ||||| || ||||||| Sbjct: 140315 tcaacatcttcaactactttcttcttctcatcaactggaggaagaggtatct 140366 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 139753 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 139812 Query: 311 tgctttgaagtcaggct 327 ||| ||||||||||||| Sbjct: 139813 tgccttgaagtcaggct 139829
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 511 tgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagttctaccagctg 570 |||||||||| ||||| |||||||| || |||||| || ||||||| |||| | || Sbjct: 86994 tgtcagtaaactttgagttgaactcgaagacatcatttggtgaaatagatctattatttg 87053 Query: 571 gttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaacggacaacat 630 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 87054 gttctttgctaagaatcttgtattttgcacaagatagagaatggagcaatcgaacaacat 87113 Query: 631 catcatctgaaaggttcagctgtgttacaatctca 665 |||||||||| || || | |||||| ||||||||| Sbjct: 87114 catcatctgagagatttaactgtgtcacaatctca 87148 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 330 aacatgcggctgagctgctccacacattccgcaactagctgtgtatgggccataactttg 389 ||||||||||||||||||||||| |||||||| || || || |||| ||| ||||||| Sbjct: 105657 aacatgcggctgagctgctccacgcattccgctacaagttgctgatggcccagaactttg 105598 Query: 390 cgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtcaaca 449 || ||||||||||| ||||||| |||||||||||||| |||||| |||||||| ||| Sbjct: 105597 cggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttgttgaca 105538 Query: 450 tcctcaaccacctttttcttctcatcga 477 || || || ||||||||||||||||||| Sbjct: 105537 tcatcgacaacctttttcttctcatcga 105510 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 384 actttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttg 443 ||||||||||| ||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 85974 actttgcgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatcctta 86033 Query: 444 tcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatct 495 |||||||| ||||| || || ||||||||||| || ||||| || ||||||| Sbjct: 86034 tcaacatcttcaactactttcttcttctcatcaactggaggaagaggtatct 86085 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 251 gttgtccttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgat 310 |||||| || |||| ||| | ||||||||| ||||| ||||| ||||| | |||||| || Sbjct: 85472 gttgtctttatccctctccaagtaatcccttgtgataagatcctcaattcgcttctttat 85531 Query: 311 tgctttgaagtcaggct 327 ||| ||||||||||||| Sbjct: 85532 tgccttgaagtcaggct 85548 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 498 atccttctcatcctgtcagtaaattttgaattgaactcaaa 538 ||||||| |||||| || |||||||| |||||||||||||| Sbjct: 105413 atccttcgcatcctatcggtaaatttggaattgaactcaaa 105373
>dbj|AK120580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135L18, full insert sequence Length = 3731 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 511 tgtcagtaaattttgaattgaactcaaaagaatcattgggcgaaatagttctaccagctg 570 |||||||||| ||||| |||||||| || |||||| || ||||||| |||| | || Sbjct: 2498 tgtcagtaaactttgagttgaactcgaagacatcatttggtgaaatagatctattatttg 2557 Query: 571 gttctttgctaagaatcttgtatttcgcacaagagagagaatggagcaaacggacaacat 630 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 2558 gttctttgctaagaatcttgtattttgcacaagatagagaatggagcaatcgaacaacat 2617 Query: 631 catcatctgaaaggttcagctgtgttacaatctca 665 |||||||||| || || | |||||| ||||||||| Sbjct: 2618 catcatctgagagatttaactgtgtcacaatctca 2652
>dbj|AB080190.1| Pisum sativum cul1 mRNA for cullin-like protein1, complete cds Length = 2724 Score = 129 bits (65), Expect = 1e-26 Identities = 134/157 (85%) Strand = Plus / Minus Query: 383 aactttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtcctt 442 |||||| ||||| ||||| ||||| |||||||| |||||||| ||||| || | |||||| Sbjct: 2298 aactttccgactcttcataatacgaacaattgaggcatcaatagcatatcttctgtcctt 2239 Query: 443 gtcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatcttgatcct 502 |||||||||||||| || |||||||||||||| |||||||| || || ||||||||||| Sbjct: 2238 gtcaacatcctcaattacttttttcttctcatccacaggaggaagaggaatcttgatcct 2179 Query: 503 tctcatcctgtcagtaaattttgaattgaactcaaaa 539 ||||| |||| |||||||| ||||| || |||||| Sbjct: 2178 cctcattttgtctgtaaatttggaattaaattcaaaa 2142
>gb|BT013673.1| Lycopersicon esculentum clone 132492F, mRNA sequence Length = 2887 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 396 ttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtcaacatcctca 455 ||||| |||||||||||||| ||||| || ||||||| || ||||||||||| || ||| Sbjct: 2238 ttcataatacgcacaattgaagcatctatagcataccgcctatccttgtcaacgtcttca 2179 Query: 456 accacctttttcttctcatcgacaggaggtaggggtatcttgatccttctcatcctgtca 515 | ||||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| Sbjct: 2178 attacctttttcttctcatcaacaggagggagaggtatcttgatcctcctcattttgtca 2119 Query: 516 gtaaattttgaattgaactcaaa 538 || || ||||| ||||||||||| Sbjct: 2118 gtgaactttgagttgaactcaaa 2096 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 258 ttgtcccgctcgaggtaatccctcgtgatgagatcttcaatcctcttcttgattgctttg 317 ||||||| ||| |||||||| || || || | |||||| || ||||||||||| |||||| Sbjct: 2376 ttgtccctctctaggtaatctctagttatcaaatcttcgattctcttcttgatagctttg 2317 Query: 318 aagtcaggcttgaacatgcg 337 | ||||||||||||||||| Sbjct: 2316 acatcaggcttgaacatgcg 2297 Score = 44.1 bits (22), Expect = 0.58 Identities = 52/62 (83%) Strand = Plus / Minus Query: 585 atcttgtatttcgcacaagagagagaatggagcaaacggacaacatcatcatctgaaagg 644 |||||||| |||||||| || || ||||| || | || ||||||||||||||||| ||| Sbjct: 2049 atcttgtacttcgcacatgaaagggaatgaagaagccgaacaacatcatcatctgatagg 1990 Query: 645 tt 646 || Sbjct: 1989 tt 1988
>emb|AJ344533.1|NTA344533 Nicotiana tabacum mRNA for cullin 1A (cul1A gene) Length = 2693 Score = 115 bits (58), Expect = 2e-22 Identities = 208/258 (80%) Strand = Plus / Minus Query: 282 gtgatgagatcttcaatcctcttcttgattgctttgaagtcaggcttgaacatgcggctg 341 ||||| ||||||||||||| ||| |||||||||||||| |||||||| ||||||||||| Sbjct: 2309 gtgataagatcttcaatccgctttttgattgctttgaaatcaggcttaaacatgcggctc 2250 Query: 342 agctgctccacacattccgcaactagctgtgtatgggccataactttgcgacttttcatg 401 | ||||| ||||| || | || ||||| | ||||| | || || || || ||||| Sbjct: 2249 aattgctcaacacactcggacacgagctgcgaatggggaagcaccttccggctcttcatt 2190 Query: 402 atacgcacaattgatgcatcaattgcatacctccggtccttgtcaacatcctcaaccacc 461 || |||||||| | |||||||||||||| | | |||||||||||||||||| ||||| Sbjct: 2189 atgcgcacaatacaagcatcaattgcataacgtctgtccttgtcaacatcctcgaccact 2130 Query: 462 tttttcttctcatcgacaggaggtaggggtatcttgatccttctcatcctgtcagtaaat 521 |||||| | ||||| |||||||| | || ||| | ||||| ||||| ||||||||||| Sbjct: 2129 tttttcctttcatctacaggaggcaaagggatcctaatcctcctcattctgtcagtaaac 2070 Query: 522 tttgaattgaactcaaaa 539 || || ||||| |||||| Sbjct: 2069 ttggagttgaattcaaaa 2052
>emb|AJ344534.1|NTA344534 Nicotiana tabacum mRNA for cullin 1B (cul1B gene) Length = 2758 Score = 111 bits (56), Expect = 3e-21 Identities = 215/268 (80%) Strand = Plus / Minus Query: 272 gtaatccctcgtgatgagatcttcaatcctcttcttgattgctttgaagtcaggcttgaa 331 |||||||| ||||| ||||||||||| | ||| |||||||||||||| |||||||| || Sbjct: 2406 gtaatcccgagtgataagatcttcaattcgctttttgattgctttgaaatcaggcttaaa 2347 Query: 332 catgcggctgagctgctccacacattccgcaactagctgtgtatgggccataactttgcg 391 ||| ||||| | |||||| ||||| ||| ||||||||| ||| | | ||| || || Sbjct: 2346 cattcggctcaactgctcaacacactccaacactagctgttgatgaggaagaaccttccg 2287 Query: 392 acttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttgtcaacatc 451 ||| ||||| || ||||| || | |||||||||||||| | | || ||||| ||||| Sbjct: 2286 actcttcataatgcgcacgatacaggcatcaattgcataacgtctatctttgtccacatc 2227 Query: 452 ctcaaccacctttttcttctcatcgacaggaggtaggggtatcttgatccttctcatcct 511 |||||||||||||||| | ||||| ||||||| | || | | | |||||||||||||| Sbjct: 2226 ctcaaccacctttttcctttcatccgcaggaggcaatgggaccctaatccttctcatcct 2167 Query: 512 gtcagtaaattttgaattgaactcaaaa 539 |||||| || || || |||||||||||| Sbjct: 2166 gtcagtgaacttggagttgaactcaaaa 2139
>emb|AJ344535.1|NTA344535 Nicotiana tabacum partial mRNA for cullin 1C (cul1C gene) Length = 1833 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Minus Query: 384 actttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtccttg 443 ||||| ||||| ||||| |||||||||||||| ||||| || ||||||| || |||||| Sbjct: 1186 actttacgactcttcataatacgcacaattgaagcatctatagcataccgcctatccttg 1127 Query: 444 tcaacatcctcaaccacctttttcttctcatcgacaggaggtaggggtatcttgatcctt 503 |||||||| |||| ||||||||||||||||| |||| || || |||||||||||||| Sbjct: 1126 tcaacatcttcaattacctttttcttctcatcctcaggcgggagaggtatcttgatcctc 1067 Query: 504 ctcatcctgtcagtaaattttgaattgaactcaaa 538 ||||| |||||| || |||| ||||||||||| Sbjct: 1066 ctcattttgtcagcgaaccttgagttgaactcaaa 1032 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 290 atcttcaatcctcttcttgattgctttgaagtcaggcttgaacatgcg 337 ||||||||| ||||||||||| ||||||| |||||||||||||||||| Sbjct: 1280 atcttcaattctcttcttgatagctttgacgtcaggcttgaacatgcg 1233 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 582 agaatcttgtatttcgcacaagagagagaatggagcaaacggacaacatcatcatctgaa 641 |||||||| ||||||||||| || |||||||| || | || ||||||||||||||||| Sbjct: 988 agaatcttatatttcgcacatgaaagagaatgaagaagccgaacaacatcatcatctgat 929 Query: 642 aggtt 646 ||||| Sbjct: 928 aggtt 924
>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence Length = 113088 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 383 aactttgcgacttttcatgatacgcacaattgatgcatcaattgcatacctccggtcctt 442 |||||| ||||| ||||| || || |||||||| |||||||| ||||| || | |||||| Sbjct: 78804 aactttccgactcttcataatgcgtacaattgaggcatcaatggcatatcttctgtcctt 78863 Query: 443 gtcaacatcctcaaccacctttttcttctcatcgacaggaggtag 487 |||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 78864 gtcaacatcctcaattacttttttcttctcatccacaggaggtag 78908
>ref|NM_116491.2| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.1 mRNA, complete cds Length = 2747 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 2408 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 2355
>ref|NM_001036498.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.2 mRNA, complete cds Length = 2655 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 2316 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 2263
>ref|NM_001036499.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.3 mRNA, complete cds Length = 2653 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 2314 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 2261
>gb|AY133878.1| Arabidopsis thaliana clone U09998 putative cullin 1 protein (AT4g02570) mRNA, complete cds Length = 2248 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 2139 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 2086
>gb|AY046030.1| Arabidopsis thaliana putative cullin 1 protein (At4g02570) mRNA, complete cds Length = 2748 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 2395 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 2342
>emb|AJ318017.1|ATH318017 Arabidopsis thaliana mRNA for cullin 1 (cul1 gene) Length = 2456 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 2173 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 2120
>dbj|AK222216.1| Arabidopsis thaliana mRNA for putative cullin-like 1 protein, partial cds, clone: RAFL25-25-H19 Length = 979 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 cttcttgattgctttgaagtcaggcttgaacatgcggctgagctgctccacaca 355 ||||||||| ||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 671 cttcttgatcgctttgatatcaggcttgaacattcggctaagttgctcaacaca 618
>ref|NM_205152.1| Gallus gallus ovalbumin (LOC396058), mRNA Length = 1873 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 1542 aattaagccagatatctgtatg 1563
>gb|J00895.1|CHKOVAL Gallus gallus ovalbumin gene, complete cds Length = 9206 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 8575 aattaagccagatatctgtatg 8596
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 ccaaaaataagctgcaagcatc 151 |||||||||||||||||||||| Sbjct: 295326 ccaaaaataagctgcaagcatc 295347
>gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-319O9, complete sequence Length = 187615 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 gacaggaggtaggggtatcttg 497 |||||||||||||||||||||| Sbjct: 139444 gacaggaggtaggggtatcttg 139465
>emb|V00438.1|GGOVAL Chicken ovalbumin gene (germ line) Length = 7564 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 7233 aattaagccagatatctgtatg 7254
>emb|V00383.1|GGALB2 Chicken messenger RNA for ovalbumin Length = 1873 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 1542 aattaagccagatatctgtatg 1563
>gb|AC007911.8|AC007911 Homo sapiens chromosome 18, clone RP11-520K18, complete sequence Length = 160299 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 gacaggaggtaggggtatcttg 497 |||||||||||||||||||||| Sbjct: 133538 gacaggaggtaggggtatcttg 133559
>gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromosome unknown, complete sequence Length = 207137 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 195744 aattaagccagatatctgtatg 195765
>gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromosome unknown, complete sequence Length = 205302 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 72507 aattaagccagatatctgtatg 72528
>gb|M34352.1|CHKOVA8 Chicken ovalbumin gene, exon 8 Length = 1030 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aattaagccagatatctgtatg 243 |||||||||||||||||||||| Sbjct: 699 aattaagccagatatctgtatg 720
>gb|AY528412.1| Brugia pahangi gamma-glutamyl transpeptidase precursor mRNA, complete cds Length = 1923 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 caattgatgcatcaattgcat 429 ||||||||||||||||||||| Sbjct: 242 caattgatgcatcaattgcat 222
>emb|Z34533.1|CEB0285 Caenorhabditis elegans Cosmid B0285, complete sequence Length = 41397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 aagagagagaatggagcaaac 621 ||||||||||||||||||||| Sbjct: 27808 aagagagagaatggagcaaac 27828
>emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chromosome 13 Contains a novel FLJ31073 containing gene, six novel genes and a CpG island, complete sequence Length = 176930 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 444 tcaacatcctcaaccacctttttcttctc 472 ||||||||| || |||||||||||||||| Sbjct: 61972 tcaacatccacacccacctttttcttctc 62000
>gb|AC107030.3| Homo sapiens 3 BAC RP11-603J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171343 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 aaaccgaaatcccaaaaataa 139 ||||||||||||||||||||| Sbjct: 26502 aaaccgaaatcccaaaaataa 26482
>gb|AC017015.4|AC017015 Homo sapiens BAC clone RP11-142L1 from 3, complete sequence Length = 163509 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 aaaccgaaatcccaaaaataa 139 ||||||||||||||||||||| Sbjct: 112988 aaaccgaaatcccaaaaataa 112968
>gb|AC007691.4|AC007691 Drosophila melanogaster, chromosome 3R, region 82B-82C, BAC clone BACR07E06, complete sequence Length = 171629 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 tatttcgcacaagagagagaa 611 ||||||||||||||||||||| Sbjct: 115919 tatttcgcacaagagagagaa 115939
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 acctacccaccaatactaatt 225 ||||||||||||||||||||| Sbjct: 8797039 acctacccaccaatactaatt 8797059
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 acctacccaccaatactaatt 225 ||||||||||||||||||||| Sbjct: 24490843 acctacccaccaatactaatt 24490823
>dbj|AP005765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0023G13 Length = 144694 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 acctacccaccaatactaatt 225 ||||||||||||||||||||| Sbjct: 65410 acctacccaccaatactaatt 65430
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 acctacccaccaatactaatt 225 ||||||||||||||||||||| Sbjct: 119049 acctacccaccaatactaatt 119029
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 acctacccaccaatactaatt 225 ||||||||||||||||||||| Sbjct: 4944 acctacccaccaatactaatt 4924
>gb|AE003605.3| Drosophila melanogaster chromosome 3R, section 3 of 118 of the complete sequence Length = 273418 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 tatttcgcacaagagagagaa 611 ||||||||||||||||||||| Sbjct: 44105 tatttcgcacaagagagagaa 44125
>ref|XM_517072.1| PREDICTED: Pan troglodytes zinc finger, FYVE domain containing 28 (LOC461076), mRNA Length = 9870 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 catgcggctgagctgctcca 351 |||||||||||||||||||| Sbjct: 6804 catgcggctgagctgctcca 6785
>gb|AC150993.4| Bos taurus BAC CH240-186K21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 182043 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tcagtaaattttgaattgaa 532 |||||||||||||||||||| Sbjct: 174234 tcagtaaattttgaattgaa 174215
>ref|NM_020972.1| Homo sapiens zinc finger, FYVE domain containing 28 (ZFYVE28), mRNA Length = 4110 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 catgcggctgagctgctcca 351 |||||||||||||||||||| Sbjct: 1363 catgcggctgagctgctcca 1344
>gb|AC139207.10| Mus musculus chromosome 12, clone RP23-102M4, complete sequence Length = 246007 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 agagagagaatggagcaaac 621 |||||||||||||||||||| Sbjct: 155132 agagagagaatggagcaaac 155113
>gb|AC082648.6| Homo sapiens BAC clone CTD-2057N4 from 7, complete sequence Length = 50485 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 aagccagatatctgtatgtgttgg 249 |||||||||||||||| ||||||| Sbjct: 46727 aagccagatatctgtaagtgttgg 46704
>gb|AC079763.7| Homo sapiens BAC clone RP11-153N17 from 7, complete sequence Length = 157848 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 aagccagatatctgtatgtgttgg 249 |||||||||||||||| ||||||| Sbjct: 46629 aagccagatatctgtaagtgttgg 46606
>emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 50886 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 ctgtcagtaaattttgaatt 529 |||||||||||||||||||| Sbjct: 30005 ctgtcagtaaattttgaatt 30024
>ref|XM_503011.1| Yarrowia lipolytica CLIB122, YALI0D18986g predicted mRNA Length = 912 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 caaccacctttttcttctca 473 |||||||||||||||||||| Sbjct: 391 caaccacctttttcttctca 372
>emb|AL158068.18| Human DNA sequence from clone RP11-478C1 on chromosome 4, complete sequence Length = 178338 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 catgcggctgagctgctcca 351 |||||||||||||||||||| Sbjct: 44712 catgcggctgagctgctcca 44693
>emb|AL137143.8| Human DNA sequence from clone RP11-207N4 on chromosome 13 Contains the 5' end of a novel gene (CG003, 13CDNA73), a novel gene and 2 CpG islands, complete sequence Length = 155151 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 acgatgcatgtacaaaatgagacc 102 |||||||||| ||||||||||||| Sbjct: 6739 acgatgcatgaacaaaatgagacc 6716
>dbj|AK126692.1| Homo sapiens cDNA FLJ44738 fis, clone BRACE3026947 Length = 4977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 catgcggctgagctgctcca 351 |||||||||||||||||||| Sbjct: 2229 catgcggctgagctgctcca 2210
>gb|AE010172.1| Pyrococcus furiosus DSM 3638, section 47 of 173 of the complete genome Length = 10586 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcttcaatcctcttcttgat 310 |||||||||||||||||||| Sbjct: 2475 tcttcaatcctcttcttgat 2456
>gb|AE009865.1|AE009865 Pyrobaculum aerophilum strain IM2 section 120 of 201 of the complete genome Length = 9975 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acatcctcaaccaccttttt 466 |||||||||||||||||||| Sbjct: 9345 acatcctcaaccaccttttt 9326
>emb|BX470097.9| Zebrafish DNA sequence from clone DKEYP-114E10 in linkage group 5, complete sequence Length = 96967 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 cttctcatcctgtcagtaaa 520 |||||||||||||||||||| Sbjct: 59378 cttctcatcctgtcagtaaa 59397
>emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in linkage group 5, complete sequence Length = 170010 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 cttctcatcctgtcagtaaa 520 |||||||||||||||||||| Sbjct: 53163 cttctcatcctgtcagtaaa 53182
>emb|AL113673.1|CNS01B1T Botrytis cinerea strain T4 cDNA library Length = 647 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ttgatgcatcaattgcatac 431 |||||||||||||||||||| Sbjct: 603 ttgatgcatcaattgcatac 622
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cctacccaccaatactaatt 225 |||||||||||||||||||| Sbjct: 19844550 cctacccaccaatactaatt 19844531
>gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromosome 7, complete sequence Length = 164152 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 aagccagatatctgtatgtgttgg 249 |||||||||||||||| ||||||| Sbjct: 52441 aagccagatatctgtaagtgttgg 52418
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cctacccaccaatactaatt 225 |||||||||||||||||||| Sbjct: 12728 cctacccaccaatactaatt 12709
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cctacccaccaatactaatt 225 |||||||||||||||||||| Sbjct: 173501 cctacccaccaatactaatt 173482
>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence Length = 170634 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 agttgcctactgtttctgac 80 |||||||||||||||||||| Sbjct: 92962 agttgcctactgtttctgac 92981
>emb|Z54147.1|HSL129H7A Human DNA sequence from clone LA04NC01-129H7 on chromosome 4, complete sequence Length = 19931 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 catgcggctgagctgctcca 351 |||||||||||||||||||| Sbjct: 14235 catgcggctgagctgctcca 14216
>gb|AC002525.1|AC002525 Human PAC clone 257C22A from 13q12-q13, complete sequence Length = 140942 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 acgatgcatgtacaaaatgagacc 102 |||||||||| ||||||||||||| Sbjct: 96193 acgatgcatgaacaaaatgagacc 96170
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 caaccacctttttcttctca 473 |||||||||||||||||||| Sbjct: 2402200 caaccacctttttcttctca 2402181
>dbj|AB046863.1| Homo sapiens mRNA for KIAA1643 protein, partial cds Length = 4110 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 catgcggctgagctgctcca 351 |||||||||||||||||||| Sbjct: 1363 catgcggctgagctgctcca 1344
>emb|AL133304.4|CNS01DUL Human chromosome 14 DNA sequence BAC R-116N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141905 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 ctcaaccacctttttcttct 471 |||||||||||||||||||| Sbjct: 72694 ctcaaccacctttttcttct 72675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,039,088 Number of Sequences: 3902068 Number of extensions: 6039088 Number of successful extensions: 115545 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115131 Number of HSP's gapped (non-prelim): 404 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
