ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14o19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186390.2| Oryza sativa (japonica cultivar-group), mRNA 186 6e-44
2dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
4dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
5dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
6gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence 119 1e-23
7gb|AY108527.1| Zea mays PCO089202 mRNA sequence 119 1e-23
8gb|AY109152.1| Zea mays PCO089203 mRNA sequence 107 4e-20
9dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
10dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
11gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 64 6e-07
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 6e-07
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
14ref|NM_197325.1| Oryza sativa (japonica cultivar-group) unknown ... 40 8.6
15gb|AY029303.1| Strongylocentrotus purpuratus ADAM precursor, mRN... 40 8.6
16ref|XM_743971.1| Aspergillus fumigatus Af293 Rab geranylgeranylt... 40 8.6
17gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.6
18gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 8.6
19gb|AC011341.3| Homo sapiens chromosome 5 clone CTC-269F1, comple... 40 8.6
20gb|AC008716.7| Homo sapiens chromosome 5 clone CTB-85P21, comple... 40 8.6
21dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
22gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 40 8.6
23gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complet... 40 8.6
24ref|NM_214470.1| Strongylocentrotus purpuratus ADAM (LOC373195),... 40 8.6
25gb|AY487776.1| Natrix tessellata isolate T299 NADH dehydrogenase... 40 8.6
26gb|AY487773.1| Natrix tessellata isolate T157 NADH dehydrogenase... 40 8.6
27gb|AY870641.1| Natrix tessellata voucher CAS 182901 NADH dehydro... 40 8.6
28gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.6
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6 
>ref|NM_186390.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 667

 Score =  186 bits (94), Expect = 6e-44
 Identities = 154/174 (88%)
 Strand = Plus / Minus

                                                                       
Query: 365 tatttaacatcaataaccagcttcccctctgtgatgtttttatcagtggaagcggagatc 424
           ||||| |||||||||||||||||||| |    |||  |||||||||||||||||||||||
Sbjct: 266 tatttcacatcaataaccagcttccctttaccgatagttttatcagtggaagcggagatc 207

                                                                       
Query: 425 ttgaaggtggctggcacgccgcgctcgaccggatcaggcacgatctccacgccgctcacc 484
           |||||||| || ||| |||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 206 ttgaaggttgcgggctcgccgcgggcgaccggatcgggcacgatctccacgccgctcacc 147

                                                                 
Query: 485 ttcaccgggtagtttttgtgcttattgcagtactcgacatctgtgacggcggag 538
           ||||||||||| || |||  |||||||||||||||||| || ||||||||||||
Sbjct: 146 ttcaccgggtacttcttgcccttattgcagtactcgacgtcggtgacggcggag 93



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                       
Query: 173 atgctgaacccgaaggagatgcagctcaattcctcatcatgctttccgagcatcttcatc 232
           |||||||||||||| |||||||||||||  |||||||| |  |  || ||||||||||| 
Sbjct: 458 atgctgaacccgaacgagatgcagctcagctcctcatcgttatcacccagcatcttcatg 399

                                                        
Query: 233 tgaatggtgtaagaacctggtggagtgattgatggtaaggtttgc 277
              ||||||||||| ||||||||||||  |||||| | |||||||
Sbjct: 398 gtgatggtgtaagagcctggtggagtgtatgatggcagggtttgc 354
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>dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F03, full
           insert sequence
          Length = 678

 Score =  186 bits (94), Expect = 6e-44
 Identities = 154/174 (88%)
 Strand = Plus / Minus

                                                                       
Query: 365 tatttaacatcaataaccagcttcccctctgtgatgtttttatcagtggaagcggagatc 424
           ||||| |||||||||||||||||||| |    |||  |||||||||||||||||||||||
Sbjct: 266 tatttcacatcaataaccagcttccctttaccgatagttttatcagtggaagcggagatc 207

                                                                       
Query: 425 ttgaaggtggctggcacgccgcgctcgaccggatcaggcacgatctccacgccgctcacc 484
           |||||||| || ||| |||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 206 ttgaaggttgcgggctcgccgcgggcgaccggatcgggcacgatctccacgccgctcacc 147

                                                                 
Query: 485 ttcaccgggtagtttttgtgcttattgcagtactcgacatctgtgacggcggag 538
           ||||||||||| || |||  |||||||||||||||||| || ||||||||||||
Sbjct: 146 ttcaccgggtacttcttgcccttattgcagtactcgacgtcggtgacggcggag 93



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                       
Query: 173 atgctgaacccgaaggagatgcagctcaattcctcatcatgctttccgagcatcttcatc 232
           |||||||||||||| |||||||||||||  |||||||| |  |  || ||||||||||| 
Sbjct: 458 atgctgaacccgaacgagatgcagctcagctcctcatcgttatcacccagcatcttcatg 399

                                                        
Query: 233 tgaatggtgtaagaacctggtggagtgattgatggtaaggtttgc 277
              ||||||||||| ||||||||||||  |||||| | |||||||
Sbjct: 398 gtgatggtgtaagagcctggtggagtgtatgatggcagggtttgc 354
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                           
Query: 408     cagtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcaggcacga 467
               ||||||||||||||||||||||||| || ||| |||||||  |||||||||| |||||||
Sbjct: 3231342 cagtggaagcggagatcttgaaggttgcgggctcgccgcgggcgaccggatcgggcacga 3231283

                                           
Query: 468     tctccacgccgctcaccttcaccgggta 495
               ||||||||||||||||||||||||||||
Sbjct: 3231282 tctccacgccgctcaccttcaccgggta 3231255



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 173     atgctgaacccgaaggagatgcagctcaattcctcatc 210
               |||||||||||||| |||||||||||||  ||||||||
Sbjct: 3233684 atgctgaacccgaacgagatgcagctcagctcctcatc 3233647



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 365     tatttaacatcaataaccagcttccc 390
               ||||| ||||||||||||||||||||
Sbjct: 3233350 tatttcacatcaataaccagcttccc 3233325



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 510     tgcagtactcgacatctgtgacggcggag 538
               ||||||||||||| || ||||||||||||
Sbjct: 3231115 tgcagtactcgacgtcggtgacggcggag 3231087
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                          
Query: 408    cagtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcaggcacga 467
              ||||||||||||||||||||||||| || ||| |||||||  |||||||||| |||||||
Sbjct: 146332 cagtggaagcggagatcttgaaggttgcgggctcgccgcgggcgaccggatcgggcacga 146273

                                          
Query: 468    tctccacgccgctcaccttcaccgggta 495
              ||||||||||||||||||||||||||||
Sbjct: 146272 tctccacgccgctcaccttcaccgggta 146245



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 173    atgctgaacccgaaggagatgcagctcaattcctcatc 210
              |||||||||||||| |||||||||||||  ||||||||
Sbjct: 148674 atgctgaacccgaacgagatgcagctcagctcctcatc 148637



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 365    tatttaacatcaataaccagcttccc 390
              ||||| ||||||||||||||||||||
Sbjct: 148340 tatttcacatcaataaccagcttccc 148315



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 510    tgcagtactcgacatctgtgacggcggag 538
              ||||||||||||| || ||||||||||||
Sbjct: 146105 tgcagtactcgacgtcggtgacggcggag 146077
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                         
Query: 408   cagtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcaggcacga 467
             ||||||||||||||||||||||||| || ||| |||||||  |||||||||| |||||||
Sbjct: 41035 cagtggaagcggagatcttgaaggttgcgggctcgccgcgggcgaccggatcgggcacga 40976

                                         
Query: 468   tctccacgccgctcaccttcaccgggta 495
             ||||||||||||||||||||||||||||
Sbjct: 40975 tctccacgccgctcaccttcaccgggta 40948



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 173   atgctgaacccgaaggagatgcagctcaattcctcatc 210
             |||||||||||||| |||||||||||||  ||||||||
Sbjct: 43377 atgctgaacccgaacgagatgcagctcagctcctcatc 43340



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 365   tatttaacatcaataaccagcttccc 390
             ||||| ||||||||||||||||||||
Sbjct: 43043 tatttcacatcaataaccagcttccc 43018



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 510   tgcagtactcgacatctgtgacggcggag 538
             ||||||||||||| || ||||||||||||
Sbjct: 40808 tgcagtactcgacgtcggtgacggcggag 40780
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>gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence
          Length = 606

 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                       
Query: 380 accagcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggc 439
           |||||||||||||    |||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct: 183 accagcttccccttctcgatggttttatcagtagaagcggagatcttgaaagtggcgggc 124

                                                                   
Query: 440 acgccgcgctcgaccggatcaggcacgatctccacgccgctcaccttcaccgggta 495
             |||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||
Sbjct: 123 ttgccgggctcgaccggatcgggcacgatctgcaccccgctcaccttcaccgggta 68



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 170 ccaatgctgaacccgaaggagatgcagct 198
           ||||||||||| ||||| |||||||||||
Sbjct: 393 ccaatgctgaagccgaacgagatgcagct 365
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>gb|AY108527.1| Zea mays PCO089202 mRNA sequence
          Length = 666

 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                       
Query: 380 accagcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggc 439
           |||||||||||||    |||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct: 262 accagcttccccttctcgatggttttatcagtagaagcggagatcttgaaagtggcgggc 203

                                                                   
Query: 440 acgccgcgctcgaccggatcaggcacgatctccacgccgctcaccttcaccgggta 495
             |||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||
Sbjct: 202 ttgccgggctcgaccggatcgggcacgatctgcaccccgctcaccttcaccgggta 147



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 170 ccaatgctgaacccgaaggagatgcagct 198
           ||||||||||| ||||| |||||||||||
Sbjct: 472 ccaatgctgaagccgaacgagatgcagct 444
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>gb|AY109152.1| Zea mays PCO089203 mRNA sequence
          Length = 811

 Score =  107 bits (54), Expect = 4e-20
 Identities = 102/118 (86%)
 Strand = Plus / Minus

                                                                       
Query: 380 accagcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggc 439
           |||||||||||||    |||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct: 273 accagcttccccttctcgatggttttatcagtagaagcggagatcttgaaagtggcgggc 214

                                                                     
Query: 440 acgccgcgctcgaccggatcaggcacgatctccacgccgctcaccttcaccgggtagt 497
             |||| | ||||||||||| |||| ||||| ||| ||||||||||||||||||||||
Sbjct: 213 ttgccgggttcgaccggatcgggcaggatctgcaccccgctcaccttcaccgggtagt 156



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 166 gaagccaatgctgaacccgaaggagatgcagctca 200
           |||||| |||||||||||||| |||||||||||||
Sbjct: 487 gaagccgatgctgaacccgaacgagatgcagctca 453
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>dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D07, full
           insert sequence
          Length = 566

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 365 tatttaacatcaataaccagcttcccctctgtgatgtttttatcagtggaagcggagatc 424
           ||||| |||||||||||||||||||| |    |||  |||||||||||||||||||||||
Sbjct: 97  tatttcacatcaataaccagcttccctttaccgatagttttatcagtggaagcggagatc 38

                                              
Query: 425 ttgaaggtggctggcacgccgcgctcgaccggatc 459
           |||||||| || ||| |||||||  ||||||||||
Sbjct: 37  ttgaaggttgcgggctcgccgcgggcgaccggatc 3



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                       
Query: 173 atgctgaacccgaaggagatgcagctcaattcctcatcatgctttccgagcatcttcatc 232
           |||||||||||||| |||||||||||||  |||||||| |  |  || ||||||||||| 
Sbjct: 289 atgctgaacccgaacgagatgcagctcagctcctcatcgttatcacccagcatcttcatg 230

                                                        
Query: 233 tgaatggtgtaagaacctggtggagtgattgatggtaaggtttgc 277
              ||||||||||| ||||||||||||  |||||| | |||||||
Sbjct: 229 gtgatggtgtaagagcctggtggagtgtatgatggcagggtttgc 185
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>dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B04, full
           insert sequence
          Length = 678

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 383 agcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggcacg 442
           ||||||||||  |||||| ||||||| ||||| |||||||||||||||||||| |||   
Sbjct: 289 agcttccccttagtgatgcttttatccgtggatgcggagatcttgaaggtggccggctgc 230

                                                          
Query: 443 ccgcgctcgaccggatcaggcacgatctccacgccgctcaccttcac 489
           ||||   |||| || ||||| |||||||| || ||||||||||||||
Sbjct: 229 ccgctgacgacggggtcagggacgatctctactccgctcaccttcac 183



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 239 gtgtaagaacctggtggagtgattgatggtaa 270
           ||||||||||||||||| ||||||||||||||
Sbjct: 433 gtgtaagaacctggtggggtgattgatggtaa 402
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 410   gtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcaggcacgatc 469
             ||||| |||||||||||||||||||| |||   ||||   |||| || ||||| ||||||
Sbjct: 88332 gtggatgcggagatcttgaaggtggccggctgcccgctgacgacggggtcagggacgatc 88273

                                 
Query: 470   tccacgccgctcaccttcac 489
             ||||| ||||||||||||||
Sbjct: 88272 tccactccgctcaccttcac 88253
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 410      gtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcaggcacgatc 469
                ||||| |||||||||||||||||||| |||   ||||   |||| || ||||| ||||||
Sbjct: 32436204 gtggatgcggagatcttgaaggtggccggctgcccgctgacgacggggtcagggacgatc 32436145

                                    
Query: 470      tccacgccgctcaccttcac 489
                ||||| ||||||||||||||
Sbjct: 32436144 tccactccgctcaccttcac 32436125
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 410      gtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcaggcacgatc 469
                ||||| |||||||||||||||||||| |||   ||||   |||| || ||||| ||||||
Sbjct: 32526714 gtggatgcggagatcttgaaggtggccggctgcccgctgacgacggggtcagggacgatc 32526655

                                    
Query: 470      tccacgccgctcaccttcac 489
                ||||| ||||||||||||||
Sbjct: 32526654 tccactccgctcaccttcac 32526635
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>ref|NM_197325.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0026L12.25), mRNA
          Length = 367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 567 cggctgcggcggcgaggaag 586
           ||||||||||||||||||||
Sbjct: 38  cggctgcggcggcgaggaag 19
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>gb|AY029303.1| Strongylocentrotus purpuratus ADAM precursor, mRNA, complete cds
          Length = 3072

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   acccacgagtgttacacaga 63
            ||||||||||||||||||||
Sbjct: 2068 acccacgagtgttacacaga 2049
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>ref|XM_743971.1| Aspergillus fumigatus Af293 Rab geranylgeranyltransferase, subunit
           beta (Afu7g04460) partial mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 220 gagcatcttcatctgaatggtgta 243
           |||||||||| |||||||||||||
Sbjct: 40  gagcatcttcgtctgaatggtgta 63
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 462     gcacgatctccacgccgctc 481
               ||||||||||||||||||||
Sbjct: 4662632 gcacgatctccacgccgctc 4662651
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
              sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 567    cggctgcggcggcgaggaag 586
              ||||||||||||||||||||
Sbjct: 104469 cggctgcggcggcgaggaag 104488
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>gb|AC011341.3| Homo sapiens chromosome 5 clone CTC-269F1, complete sequence
          Length = 51684

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   gggcaaggaagccaatgctg 178
             ||||||||||||||||||||
Sbjct: 30310 gggcaaggaagccaatgctg 30291
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>gb|AC008716.7| Homo sapiens chromosome 5 clone CTB-85P21, complete sequence
          Length = 184589

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  gggcaaggaagccaatgctg 178
            ||||||||||||||||||||
Sbjct: 7207 gggcaaggaagccaatgctg 7226
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 567      cggctgcggcggcgaggaag 586
                ||||||||||||||||||||
Sbjct: 19271912 cggctgcggcggcgaggaag 19271893
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>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   gacggctgcggcggcgagga 584
             ||||||||||||||||||||
Sbjct: 39616 gacggctgcggcggcgagga 39597
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>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence
          Length = 137457

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    gagcatcttcatctgaatgg 239
              ||||||||||||||||||||
Sbjct: 118102 gagcatcttcatctgaatgg 118121
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>ref|NM_214470.1| Strongylocentrotus purpuratus ADAM (LOC373195), mRNA
          Length = 3072

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   acccacgagtgttacacaga 63
            ||||||||||||||||||||
Sbjct: 2068 acccacgagtgttacacaga 2049
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>gb|AY487776.1| Natrix tessellata isolate T299 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 atatttaacatcaataacca 383
           ||||||||||||||||||||
Sbjct: 888 atatttaacatcaataacca 907
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>gb|AY487773.1| Natrix tessellata isolate T157 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 atatttaacatcaataacca 383
           ||||||||||||||||||||
Sbjct: 888 atatttaacatcaataacca 907
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>gb|AY870641.1| Natrix tessellata voucher CAS 182901 NADH dehydrogenase subunit 2
           (ND2) gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 atatttaacatcaataacca 383
           ||||||||||||||||||||
Sbjct: 888 atatttaacatcaataacca 907
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 444     cgcgctcgaccggatcaggc 463
               ||||||||||||||||||||
Sbjct: 2234998 cgcgctcgaccggatcaggc 2235017
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 567      cggctgcggcggcgaggaag 586
                ||||||||||||||||||||
Sbjct: 19283188 cggctgcggcggcgaggaag 19283169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,610,600
Number of Sequences: 3902068
Number of extensions: 4610600
Number of successful extensions: 98840
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98377
Number of HSP's gapped (non-prelim): 456
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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