ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15d16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1) 53 8e-07
2TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein) 53 8e-07
3TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein) 53 8e-07
4TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p... 52 2e-06
5EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb... 41 0.002
6EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (... 41 0.002
7EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (... 40 0.004
8PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi... 40 0.005
9CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1 39 0.012
10PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi... 39 0.015
11PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi... 38 0.020
12PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi... 38 0.020
13PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi... 38 0.020
14PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi... 38 0.020
15PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi... 38 0.020
16PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi... 38 0.020
17PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind... 38 0.020
18PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi... 38 0.020
19PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi... 38 0.020
20PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi... 38 0.020
21PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g... 38 0.026
22RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ... 37 0.034
23ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur... 37 0.034
24PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 37 0.045
25ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro... 37 0.045
26RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ... 37 0.059
27ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 36 0.077
28ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha... 36 0.077
29ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP) 36 0.077
30ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB) 36 0.077
31ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2 36 0.077
32ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 36 0.077
33NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA... 36 0.077
34ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha... 36 0.077
35PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (6... 36 0.077
36ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo... 36 0.077
37ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec... 36 0.10
38RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15 36 0.10
39PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b... 36 0.10
40ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec... 36 0.10
41ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur... 36 0.10
42ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC) 36 0.10
43ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P... 36 0.10
44ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR) 36 0.10
45PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi... 36 0.10
46ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur... 36 0.10
47CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine... 35 0.13
48CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r... 35 0.13
49CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine... 35 0.13
50CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine... 35 0.13
51CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine... 35 0.13
52CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine... 35 0.13
53ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor 35 0.13
54PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi... 35 0.13
55GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment) 35 0.17
56ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu... 35 0.22
57ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu... 35 0.22
58ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E... 35 0.22
59RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri... 35 0.22
60PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi... 34 0.29
61PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-... 34 0.29
62PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-... 34 0.29
63PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi... 34 0.38
64RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch... 34 0.38
65ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur... 33 0.50
66GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2 33 0.50
67SAP49_SCHPO (O14102) Spliceosome-associated protein 49 33 0.50
68PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi... 33 0.65
69YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i... 33 0.85
70GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu... 33 0.85
71RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi) 32 1.1
72NSR1_YEAST (P27476) Nuclear localization sequence-binding protei... 32 1.1
73YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i... 32 1.1
74RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif p... 32 1.4
75RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif p... 32 1.4
76YVDH_STRFR (P40177) Hypothetical 32.3 kDa protein in vdh 3'regio... 32 1.4
77MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos... 32 1.4
78TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha) 32 1.9
79GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein 32 1.9
80YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 i... 32 1.9
81TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha) 32 1.9
82HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1) 32 1.9
83YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 ... 32 1.9
84YBF1_YEAST (P34217) Hypothetical 73.8 kDa protein in SAS3-SEC17 ... 32 1.9
85YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 i... 32 1.9
86RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co... 32 1.9
87RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He... 32 1.9
88GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A 31 2.5
89GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 31 2.5
90ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor 31 2.5
91GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ... 31 2.5
92TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein 31 2.5
93MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing prote... 31 2.5
94Y4090_STRCO (Q06542) Hypothetical protein SCO4090 31 3.2
95ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur... 31 3.2
96GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7 31 3.2
97YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5 31 3.2
98RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin... 30 4.2
99U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliar... 30 4.2
100YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 i... 30 4.2
101U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar... 30 4.2
102MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote... 30 4.2
103RSD1_SCHPO (O13845) RNA-binding protein rsd1 30 4.2
104ARP2_PLAFA (P13824) Clustered-asparagine-rich protein (CARP) 30 4.2
105U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliar... 30 4.2
106GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon... 30 5.5
107RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre... 30 5.5
108MEND_PASMU (Q9CPI4) Menaquinone biosynthesis protein menD [Inclu... 30 5.5
109PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin... 30 5.5
110TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran... 30 5.5
111TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr... 30 5.5
112TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr... 30 5.5
113RAVR2_HUMAN (Q9HCJ3) Protein raver-2 30 7.2
114MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 30 7.2
115RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p... 30 7.2
116FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing ... 30 7.2
117CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit... 30 7.2
118CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit... 30 7.2
119CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit... 30 7.2
120CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit... 30 7.2
121NAM8_YEAST (Q00539) Protein NAM8 30 7.2
122CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit... 30 7.2
123CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit... 30 7.2
124YIAN_ECOLI (P37675) 2,3-diketo-L-gulonate TRAP transporter large... 29 9.4
125RAVR2_MOUSE (Q7TPD6) Protein raver-2 29 9.4
126RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-ri... 29 9.4
127RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa... 29 9.4
128RAVR1_HUMAN (Q8IY67) Protein raver-1 29 9.4
129GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro... 29 9.4
130GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10 29 9.4
131MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing prote... 29 9.4 
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +RV  DKG+ FVR+S+HE AA AI + NG  I G  +KC WG +
Sbjct: 243 IRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           + KG+GFV +    +A  AIQ   GQ +GGRQI+ +W ++
Sbjct: 145 KSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 184



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 577 FVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           FV +  H  AA A+   NG+ I G+++K +W +
Sbjct: 50  FVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT 82
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>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +RV  +KG+ FVR+STHE AA AI + NG  I G  +KC WG +
Sbjct: 251 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 294



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           + KG+GFV +    +A  AI    GQ +GGRQI+ +W ++
Sbjct: 153 KSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 192



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 598 TRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           T +  + FV +  H +AA A+   NG+ I G+++K +W +
Sbjct: 62  TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 101
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>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +RV  +KG+ FVR+STHE AA AI + NG  I G  +KC WG +
Sbjct: 234 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           + KG+GFV +    +A  AI    GQ +GGRQI+ +W ++
Sbjct: 136 KSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 598 TRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           T +  + FV +  H +AA A+   NG+ I G+++K +W +
Sbjct: 45  TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84
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>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +RV  DKG+ FVR+++HE AA AI + NG  I G  +KC WG +
Sbjct: 243 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           + KG+GFV +    +A  AIQ   GQ +GGRQI+ +W ++
Sbjct: 145 KSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 184



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 577 FVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           FV +  H  AA A+   NG+ I G+++K +W +
Sbjct: 50  FVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT 82
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>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV Y  HEEA +A+   NG+ + GR I
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261



 Score = 36.6 bits (83), Expect = 0.059
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           +G+GFV + T E A +AIQT NG L+  R++
Sbjct: 138 RGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
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>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV Y  HEEA +A+   NG+ + GR I
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261



 Score = 39.7 bits (91), Expect = 0.007
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           +G+GFV + THE A +AIQT NG L+  R++
Sbjct: 138 RGYGFVHFETHEAANRAIQTMNGMLLNDRKV 168



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
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>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV Y  HEEA +A+   NG+ + GR +
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMV 261



 Score = 36.6 bits (83), Expect = 0.059
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           +G+GFV + T E A +AIQT NG L+  R++
Sbjct: 138 RGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
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>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + THE A +AI+  NG L+ GR++
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKV 168



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +  HE+A +A+   NG+ + G+QI
Sbjct: 229 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
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>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           +++   KG GFV+YS    A +AI T  G L+G   I+ +WG
Sbjct: 326 IKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWG 367
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>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           V+V RD     KGFGFV Y  HE+A +A++  NG+ I G+ I
Sbjct: 220 VKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261



 Score = 37.4 bits (85), Expect = 0.034
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++G + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+ FV + T E A +AI+  NG L+  R++
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKV 168
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>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           V+V RD     KGFGFVRY THE A +A+   +G+ I G+
Sbjct: 228 VKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           + V + KGFG V +S+ EEA +A+   NG+++G + +  + G
Sbjct: 335 MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376
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>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           V+V RD     KGFGFVRY THE A +A+   +G+ I G+
Sbjct: 228 VKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           + V + KGFG V +S+ EEA +A+   NG+++G + +  + G
Sbjct: 335 MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376
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>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           V+V RD     KGFGFVRY THE A +A+   +G+ I G+
Sbjct: 228 VKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           + V + KGFG V +S+ EEA +A+   NG+++G + +  + G
Sbjct: 335 MEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLG 376
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>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           V+V RD     KGFGFVRY THE A +A+   +G+ I G+
Sbjct: 228 VKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           + V + KGFG V +S+ EEA +A+   NG+++G + +  + G
Sbjct: 335 MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376
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>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           V+V RD     KGFGFVRY THE A +A+   +G+ I G+
Sbjct: 228 VKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           + V + KGFG V +S+ EEA +A+   NG+++G + +  + G
Sbjct: 335 MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376
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>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = -2

Query: 607 VRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           V+V RD     KGFGFVRY THE A +A+   +G+ I G+
Sbjct: 228 VKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           + V + KGFG V +S+ EEA +A+   NG+++G + +  + G
Sbjct: 335 MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376
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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +  HE+A +A+   NG+ + G+QI
Sbjct: 229 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261



 Score = 34.7 bits (78), Expect = 0.22
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A +AI+  NG L+  R++
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +  HE+A +A+   NG+ + G+QI
Sbjct: 229 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261



 Score = 34.7 bits (78), Expect = 0.22
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A +AI+  NG L+  R++
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +  HE+A +A+   NG+ + G+QI
Sbjct: 229 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261



 Score = 34.7 bits (78), Expect = 0.22
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A +AI+  NG L+  R++
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +  HE+A +A+   NG+ + G+QI
Sbjct: 229 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261



 Score = 34.7 bits (78), Expect = 0.22
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A +AI+  NG L+  R++
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +ST EEA  A++T +GQ+  G+ +
Sbjct: 342 KSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPL 374



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + +G+GFV++   + A  AIQT N  ++  ++I
Sbjct: 150 KSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEI 182
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>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 37.4 bits (85), Expect = 0.034
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGF+ ++  E A+ A++  NG+ + GRQI+     K
Sbjct: 45  RSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK 84
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>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 37.4 bits (85), Expect = 0.034
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R KGFGFV  S+ +E  +AI + NG  + GRQI+ S
Sbjct: 296 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVS 331



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           R +GFGFV  ST  E   A Q  NG    GR ++ + G
Sbjct: 138 RSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAG 175
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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +ST EEA +AI   N Q++ G+ +
Sbjct: 359 KSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 391



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KGFGFV Y  HE+A +A++  N   + G ++
Sbjct: 258 KGFGFVNYEKHEDAVKAVEALNDSELNGEKL 288



 Score = 33.1 bits (74), Expect = 0.65
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +     A +AI   NG L+ G++I
Sbjct: 163 KSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 195
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>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R KGFGFV Y + +E   AI++ +G  + GRQI+ S
Sbjct: 243 RSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVS 278



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           R +GFGFV  S+  E   A Q  NG  + GR ++ + G
Sbjct: 130 RSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAG 167
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>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGF+ ++  E A+ A++  NG+ + GRQI+     K
Sbjct: 45  RSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGK 84
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>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 306 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 352
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>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 326 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 372
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>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV  ST EEA +A++  NG  + GRQ+
Sbjct: 94  RSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQL 126



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GFGFV  S+  E   AI   +GQ + GR ++
Sbjct: 188 RSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVR 221
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>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 305 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
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>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 305 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
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>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 305 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
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>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           VR+   K  GFV++    +A  +IQ   G ++GG  I+ SWG
Sbjct: 389 VRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWG 430
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>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 331 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 377
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>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly|
           U-binding splicing factor) (Protein half pint) (PUF60
           homolog)
          Length = 637

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KGF FV Y   E A  A++  NG L+GGR IK
Sbjct: 169 KHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIK 202
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>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 319 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 365
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>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R +GFGFV YS+ +E   AI + NG  + GR I+ S
Sbjct: 246 RSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVS 281



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           R +GFGFV  ST EE   A Q  NG  I GR I+ + G
Sbjct: 126 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAG 163
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>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           R KG+ F+ +   E +A A++  NG  +G R +KC + S
Sbjct: 57  RSKGYAFIEFRDLESSASAVRNLNGYQLGSRFLKCGYSS 95
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>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 12/38 (31%), Positives = 26/38 (68%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +G+GFV +++ ++A  A+ +  GQ + GR ++ +W +K
Sbjct: 202 RGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 239



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 592 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +KG  F++Y THE+AA  I         GR ++  WG +
Sbjct: 374 EKGCCFIKYDTHEQAAVCIVALANFPFQGRNLRTGWGKE 412
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>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R +GFGFV YS+ EE   AI++ +G  + GR I+ S
Sbjct: 227 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 262



 Score = 33.5 bits (75), Expect = 0.50
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           R +GFGFV  S+ EE   A Q  NG  + GR ++ + G
Sbjct: 126 RSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSG 163
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>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           R +GFGFV  ST EE   A Q  NG  I GR I+ + G
Sbjct: 127 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAG 164



 Score = 35.0 bits (79), Expect = 0.17
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R +GFGFV YS+ +E   AI + NG  + GR I+ S
Sbjct: 247 RSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVS 282
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>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 313 VKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSF 359
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>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + ++EAA AI + NG  +G R ++ S+
Sbjct: 313 VKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSF 359
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>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + +EEAA AI + NG  +G + ++ S+
Sbjct: 273 VKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
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>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KG+GFV+Y+  E A +AI+  NG L+  +Q+
Sbjct: 162 QSKGYGFVQYANEESAQKAIEKLNGMLLNDKQV 194



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNG 521
           + KGFGFV +   ++AA+A+++ NG
Sbjct: 253 KSKGFGFVNFENADDAARAVESLNG 277
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>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R +GFGFV YS+ EE   AI++ +G  + GR I+ S
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268



 Score = 33.5 bits (75), Expect = 0.50
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           R +GFGFV  S+ EE   A Q  NG  + GR ++ + G
Sbjct: 126 RSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSG 163
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>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGFV +   ++A  A+   NG+ + GRQI+     K
Sbjct: 44  RSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQAGK 83
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>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGFV +   ++A  A+   NG+ + GRQI+     K
Sbjct: 45  RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84
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>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGFV +   ++A  A+   NG+ + GRQI+     K
Sbjct: 45  RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84
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>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGFV +   ++A  A+   NG+ + GRQI+     K
Sbjct: 45  RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84
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>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGFV +   ++A  A+   NG+ + GRQI+     K
Sbjct: 45  RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84
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>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R +GFGFV +   ++A  A+   NG+ + GRQI+     K
Sbjct: 45  RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84
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>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -2

Query: 604 RVT-RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           RVT R +GF FV   + EEA +AI+  +G  +GGR +K ++
Sbjct: 149 RVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNF 189
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>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           +GFGFV YS  EEA +A+   NG++IG + +
Sbjct: 372 RGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402



 Score = 33.1 bits (74), Expect = 0.65
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KG+GFV++   E A  AI   NG L+  +Q+
Sbjct: 174 RSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQV 206
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>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +ST E    AI+  NG+ + GR I
Sbjct: 26  RSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNI 58
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>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 519

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           KG+GFV  + ++EAA AI+  NG  +G R ++ S+
Sbjct: 479 KGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSF 513



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 598 TRDKGFGFVRYSTHEEAAQAIQTGNG 521
           T+ KG GF+R+   EEA +AI   NG
Sbjct: 323 TQTKGVGFIRFDKREEATRAIIALNG 348



 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 586 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           G+GFV Y   ++A QA+   NG  +  + IK S+
Sbjct: 240 GYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSF 273
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>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 483

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           KG+GFV  + ++EAA AI+  NG  +G R ++ S+
Sbjct: 443 KGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSF 477



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 598 TRDKGFGFVRYSTHEEAAQAIQTGNG 521
           T+ KG GF+R+   EEA +AI   NG
Sbjct: 287 TQTKGVGFIRFDKREEATRAIIALNG 312



 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 586 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           G+GFV Y   ++A QA+   NG  +  + IK S+
Sbjct: 204 GYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSF 237
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>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           V+V RD      KGFGFV  + +EE+A AI + NG  +G + ++ S+
Sbjct: 273 VKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKILQVSF 319
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>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KGFGFVR+    +A  A+   +G+L+ GR+++
Sbjct: 58  QSKGFGFVRFYERRDAEHALDRTDGKLVDGRELR 91
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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           +GFGFV YS  EEA  A++  NG++IG + +
Sbjct: 368 RGFGFVAYSNPEEALLAMKEMNGKMIGRKPL 398



 Score = 33.9 bits (76), Expect = 0.38
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 601 VTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           V R KG+GFV++   E A  AI   NG L+  +Q+
Sbjct: 168 VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQV 202
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>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + +GFGFV +  HE+A +A+   NG+ + G+ I
Sbjct: 229 KSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAI 261



 Score = 33.9 bits (76), Expect = 0.38
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A +AI   NG L+  R++
Sbjct: 138 KGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168
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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV +S+ EEA +A+   NG+++  + +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV +  HE+A +A+   NG+ + G+ +
Sbjct: 229 KSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSM 261



 Score = 33.9 bits (76), Expect = 0.38
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A +AI   NG L+  R++
Sbjct: 138 KGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168
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>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + KGFGFV Y+T EEA +A+   N +++ G+ +
Sbjct: 402 KSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPL 434



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           + +GFGFV Y+ HE A +A+   N +   G+++
Sbjct: 299 KPRGFGFVNYANHECAQKAVDELNDKEYKGKKL 331



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + + E A  AI+  NG L+  +++
Sbjct: 208 KGYGFVHFDSVESANAAIEHVNGMLLNDKKV 238
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>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -2

Query: 598 TRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           ++  GFGFV +S+ EE   AIQ  N  ++ G++I+
Sbjct: 222 SKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIR 256



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R + FGFV   T E+A   I+  N   IGGR+IK
Sbjct: 123 RSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIK 156
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>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GFGFV  S+  E ++AI   +GQ + GR I+
Sbjct: 230 RSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIR 263



 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           R +GFGFV  ST EEA +A++  +   + GR
Sbjct: 136 RSRGFGFVTMSTVEEADKAVELYSQYDLNGR 166
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>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +S+ +    AI+  NG+ + GR I
Sbjct: 47  RSRGFGFVTFSSEQSMLDAIENMNGKELDGRNI 79
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>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R KG+GFV Y + E A  AI+  N Q +  + I  S+  K
Sbjct: 138 RSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFK 177
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>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV + T E A  +I   NG L+ G+++
Sbjct: 130 KGYGFVHFETEEAANTSIDKVNGMLLNGKKV 160



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R KGFGFV ++   EA  A+   NG+++G + +
Sbjct: 325 RSKGFGFVCFNAASEATCAVTELNGRVVGSKPL 357



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIG 509
           + KGFGFV + T E A  A+Q  NG+ +G
Sbjct: 221 KSKGFGFVAFETTEAAEAAVQALNGKDMG 249
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>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 607 VRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           V++   KG GFV++   + A  AI    G  +G  +I+ SWG
Sbjct: 332 VKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWG 373
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>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +S+      AI+  NG+ + GR I
Sbjct: 47  RSRGFGFVTFSSENSMLDAIENMNGKELDGRNI 79
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>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)|
          Length = 165

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           KG+  V Y TH++A  A +  NG  I G+ I+  W
Sbjct: 114 KGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 148
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>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           KGFG+V++S  E+A +A+    G+ I  R ++  + S
Sbjct: 308 KGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 344



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKC 491
           R +G+G+V +     A +AIQ   G+ I GR I C
Sbjct: 207 RSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINC 241
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>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GF++   HE+A  AI+T NG +  G ++
Sbjct: 381 KGYGFIKLINHEQALAAIETFNGFMWHGNRL 411
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>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)|
           (Ribonucleoprotein RBM8A)
          Length = 174

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           KG+  V Y T++EA  A++  NGQ + G+ I   W
Sbjct: 114 KGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDW 148
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>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)|
           (Ribonucleoprotein RBM8A) (RNA-binding protein Y14)
           (Binder of OVCA1-1) (BOV-1)
          Length = 174

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           KG+  V Y T++EA  A++  NGQ + G+ I   W
Sbjct: 114 KGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDW 148
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>YVDH_STRFR (P40177) Hypothetical 32.3 kDa protein in vdh 3'region (ORF1)|
          Length = 284

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 158 EGGRCCSPLRRQHTCFIQSRHSIVHELLLLRVDTLEAPVIDGLAGAG 298
           EG +   P+ R  T  +++R  +   L +LR    E+P+IDGL   G
Sbjct: 165 EGEKAERPVLRYRTPMVEARRRVARGLRVLREALNESPLIDGLEDVG 211
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>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKC 491
           KG+GFV +   E A    +T N  L+G R IKC
Sbjct: 86  KGYGFVEFECDEVAKIVAETMNNYLMGERIIKC 118
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>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -2

Query: 604 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           R  R +GF FV +   +++ +A++  NG  + GR+I+  +
Sbjct: 153 RTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
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>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +   +    AI+  NGQ + GR I
Sbjct: 45  RSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNI 77
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>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I|
          Length = 219

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 604 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           R  + +GFGFV +   ++  +A +  NG+ IG R +K S
Sbjct: 65  REGKTRGFGFVSFKDSDQFLKAWREKNGKYIGSRPVKLS 103
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>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -2

Query: 604 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           R  R +GF FV +   +++ +A++  NG  + GR+I+  +
Sbjct: 155 RTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
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>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 16/66 (24%)
 Frame = -1

Query: 371 CSEQNGCQPGP----DGSARRPEAGCYGRR------------RQPGHL*RGLPECQPSAA 240
           C ++ G +  P    DG AR+ + G  GRR            RQPG    GLP C P   
Sbjct: 118 CGKRGGAETRPGRGEDGPARQTDRGPGGRRAAHCSHVPPWIRRQPGP---GLPTCPPGEC 174

Query: 239 AAHVLL 222
           A  ++L
Sbjct: 175 AGQMML 180
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>YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 intergenic|
           region
          Length = 713

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -2

Query: 607 VRVTRDKG---FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKC 491
           V+V RD     + FV+Y+   +A  A+    G L+ GR+++C
Sbjct: 126 VKVLRDNANRPYAFVQYNNDHDAKHALIRAQGTLLNGRRLRC 167
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>YBF1_YEAST (P34217) Hypothetical 73.8 kDa protein in SAS3-SEC17 intergenic|
           region
          Length = 668

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +G  F  ++T EE  Q I + NG+ I GR++K  +
Sbjct: 126 RGLAFANFTTPEETTQVITSLNGKEISGRKLKVEY 160
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>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I|
          Length = 297

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
 Frame = -2

Query: 607 VRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           VR+ R+      +GFGF+ +ST EEA  AI   N Q   GR
Sbjct: 130 VRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGR 170
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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R KG+GF+ +S  E A +A++  NG  + GR +K
Sbjct: 289 RSKGYGFITFSDSECAKKALEQLNGFELAGRPMK 322
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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R KG+GF+ +S  E A +A++  NG  + GR +K
Sbjct: 289 RSKGYGFITFSDSECAKKALEQLNGFELAGRPMK 322
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>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +   +    AI+  NGQ + GR I
Sbjct: 47  RSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79
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>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +   +    AI+  NGQ + GR I
Sbjct: 47  RSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79
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>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GFGFV  ++  E + AI   +GQ + GR I+
Sbjct: 269 RSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIR 302



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           + +GFGFV  ST EEA +A++  N   + GR
Sbjct: 175 QSRGFGFVTMSTVEEAEKAVEMYNRYDVNGR 205
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>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2|
           (G-strand-binding protein 2) (RAP1 localization factor
           6)
          Length = 427

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 482
           +GFG V Y T +E  +AI T NG  + GR ++   G
Sbjct: 259 RGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEVREG 294
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>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein|
          Length = 348

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIG 509
           R +GFGFV ++  E+ ++AI+  NG+ +G
Sbjct: 256 RGRGFGFVSFANAEDQSRAIEEMNGKQVG 284
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>MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing protein 1|
          Length = 769

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           +GF F+ ++TH EAA+A++      + GR +   W ++
Sbjct: 686 RGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWANE 723
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>Y4090_STRCO (Q06542) Hypothetical protein SCO4090|
          Length = 283

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +2

Query: 158 EGG---RCCSPLRRQHTCFIQSRHSIVHELLLLRVDTLEAPVIDGLAGAG 298
           EGG      +P+ R  T  +Q+R  +   L  LR    E P+IDGL   G
Sbjct: 161 EGGGDEAATAPVLRYRTPMVQARRRVARGLRALREAVDEGPLIDGLVDVG 210
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>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GFGFV  S  +E  +AI   +GQ + GR I+
Sbjct: 283 RSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 316
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>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +   +    AI+  NGQ + GR I
Sbjct: 47  RSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSI 79
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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           KGF F+ +++ E +  A++  NGQ +  R I  S+  K
Sbjct: 142 KGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 179
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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R KG+GF+ +S  E A +A++  NG  + GR ++
Sbjct: 302 RSKGYGFITFSDSECARRALEQLNGFELAGRPMR 335
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>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1)
          Length = 479

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +G  +V+Y + EE   A+   NG+   GRQ++C +
Sbjct: 272 RGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEF 306
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>YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 in chromosome I|
          Length = 576

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +G  F  + + EEA   +Q  NG  I GR+++  W
Sbjct: 273 RGLAFANFHSPEEAKTVVQVLNGYEITGRRLRVEW 307
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>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +G  +V+Y + EE   A+   NG+   GRQ++C +
Sbjct: 267 RGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEF 301
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>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1|
          Length = 858

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +GFGFV YST  EA  A++      + GR +   W
Sbjct: 759 RGFGFVEYSTVREAQSAMEALKHTHLLGRHLVLQW 793
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>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 479
           R KGFG+++Y     A  A++  NG  + GR ++   G+
Sbjct: 378 RSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGN 416
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>ARP2_PLAFA (P13824) Clustered-asparagine-rich protein (CARP)|
          Length = 443

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R+ GFGFV Y     A  AIQ  NG  +  + +K
Sbjct: 396 RNSGFGFVSYDNVISAQHAIQFMNGYFVNNKYLK 429
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>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1) (SP2)
          Length = 428

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +G  +V+Y + EE   A+   NG+   GRQ++C +
Sbjct: 258 RGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEF 292
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>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GFGFV ++    A  AI   +G+ + GR I+
Sbjct: 74  RSRGFGFVNFNDEGAATAAISEMDGKELNGRHIR 107
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>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +G+GFV + + + A  AI   NGQ + G  I
Sbjct: 70  RSRGYGFVNFISEDSANSAISAMNGQELNGFNI 102
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>MEND_PASMU (Q9CPI4) Menaquinone biosynthesis protein menD [Includes:|
           2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
           synthase (EC 2.5.1.64) (SHCHC synthase); 2-oxoglutarate
           decarboxylase (EC 4.1.1.71) (Alpha-ketoglutarate
           decarboxylase) (KDC)]
          Length = 568

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -1

Query: 395 PHLLRAIPCSEQNGCQPGPDGSA----RRPEAGCYGRRRQPGHL*RGLPECQP 249
           PH+    P +  N  +P  D SA     R E  CY + RQPG +   +P  +P
Sbjct: 126 PHMYADYPVASVNLPRPSQDYSADWLISRLEQACYQQARQPGVVHVNVPFAEP 178
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>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein|
           crp79) (Poly(A)-binding protein) (PABP) (Meiotic
           expression up-regulated protein 5)
          Length = 710

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           KG+GFV +   E A +A  T NG ++G ++I
Sbjct: 425 KGYGFVAFRQIEAAVRAKDTLNGMMVGKKRI 455
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>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GF FV +   ++A +A +  NG  + GR+I+
Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190
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>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GF FV +   ++A +A +  NG  + GR+I+
Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190
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>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           R +GF FV +   ++A +A +  NG  + GR+I+
Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190
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>RAVR2_HUMAN (Q9HCJ3) Protein raver-2|
          Length = 691

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 586 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           GF  V YST E+A +  Q  +G  I G +++ S+
Sbjct: 273 GFAVVEYSTAEQAEEVQQAADGMTIKGSKVQVSF 306
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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -2

Query: 607 VRVTRDKG-----FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 488
           V++ RD+      FGF+ Y   E+A  A++  NG  I   +I+ S
Sbjct: 46  VKILRDRNGESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEVS 90
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>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           +GFGFV++    EA +A++  N + I GR +   W
Sbjct: 153 RGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDW 187
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>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X|
           protein 1)
          Length = 415

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           KGFGFV     ++A +A Q  +G +I GR+I+
Sbjct: 192 KGFGFVTMERPQDAERARQELHGSMIEGRKIE 223
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>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KG+GF  Y   E A  A++  NG+   GR ++
Sbjct: 55  KPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
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>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KG+GF  Y   E A  A++  NG+   GR ++
Sbjct: 55  KPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
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>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KG+GF  Y   E A  A++  NG+   GR ++
Sbjct: 55  KPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KG+GF  Y   E A  A++  NG+   GR ++
Sbjct: 55  KPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
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>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           KG+GFV+++  +E   A+    G  + GR IK
Sbjct: 205 KGYGFVKFTNSDEQQLALSEMQGVFLNGRAIK 236
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>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KG+GF  Y   E A  A++  NG+   GR ++
Sbjct: 55  KPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
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>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 494
           + KG+GF  Y   E A  A++  NG+   GR ++
Sbjct: 55  KPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
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>YIAN_ECOLI (P37675) 2,3-diketo-L-gulonate TRAP transporter large permease|
           protein yiaN
          Length = 425

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 518 TYWWEADQVLLGKQTNSTRDSICTSSPSGISAI 420
           T+WW+A ++ L +Q  +T   I  S  SGI A+
Sbjct: 188 TWWWQASRLNLPRQQKATMQEIWHSFVSGIWAL 220
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>RAVR2_MOUSE (Q7TPD6) Protein raver-2|
          Length = 673

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 586 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           GF  V YST E A +  Q  +G  I G Q++ S+
Sbjct: 262 GFAVVEYSTAEHAEEVQQVADGITIKGSQVQLSF 295
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>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 586 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           GFGFV +    +A  A+   NG+ +GG ++
Sbjct: 37  GFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
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>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -2

Query: 604 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 476
           R ++ +GF F+ +    +A  A +  NG+ + G+ IK     K
Sbjct: 43  RTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKK 85
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>RAVR1_HUMAN (Q8IY67) Protein raver-1|
          Length = 606

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 589 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 485
           KGF  + Y T E A +A Q  +G  +GG  ++ S+
Sbjct: 262 KGFAVLEYETAEMAEEAQQQADGLSLGGSHLRVSF 296
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>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +   +    AI+  NG+ + GR I
Sbjct: 45  RSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVI 77
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>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 595 RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 497
           R +GFGFV +   +    AI   NG+ + GR I
Sbjct: 45  RSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTI 77
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>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1|
          Length = 819

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 604 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGR 503
           R T  KGF +V+Y+  + A +A +  +G++  GR
Sbjct: 331 RFTTSKGFAYVQYADPDAAVEAYRNLDGKIFQGR 364


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,830,602
Number of Sequences: 219361
Number of extensions: 1825655
Number of successful extensions: 4874
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 4581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4874
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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