| Clone Name | rbags15d10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 329 bits (166), Expect = 7e-87 Identities = 307/354 (86%) Strand = Plus / Minus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1101 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1042 Query: 351 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 410 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1041 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 982 Query: 411 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 470 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 981 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 922 Query: 471 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 530 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 921 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 862 Query: 531 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 590 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 861 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 802 Query: 591 agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaactt 644 ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 801 agtaagctgaccctttgaatcacggctggttccacatttctcattaataaactt 748
>dbj|AK103944.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A01, full insert sequence Length = 1431 Score = 329 bits (166), Expect = 7e-87 Identities = 307/354 (86%) Strand = Plus / Minus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1115 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1056 Query: 351 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 410 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1055 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 996 Query: 411 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 470 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 995 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 936 Query: 471 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 530 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 935 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 876 Query: 531 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 590 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 875 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 816 Query: 591 agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaactt 644 ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 815 agtaagctgaccctttgaatcacggctggttccacatttctcattaataaactt 762
>dbj|AK098931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F18, full insert sequence Length = 1522 Score = 329 bits (166), Expect = 7e-87 Identities = 307/354 (86%) Strand = Plus / Minus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1156 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1097 Query: 351 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 410 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1096 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1037 Query: 411 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 470 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 1036 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 977 Query: 471 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 530 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 976 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 917 Query: 531 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 590 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 916 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 857 Query: 591 agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaactt 644 ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 856 agtaagctgaccctttgaatcacggctggttccacatttctcattaataaactt 803
>dbj|AK062024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G03, full insert sequence Length = 1544 Score = 329 bits (166), Expect = 7e-87 Identities = 307/354 (86%) Strand = Plus / Minus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1158 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1099 Query: 351 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 410 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1098 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1039 Query: 411 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 470 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 1038 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 979 Query: 471 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 530 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 978 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 919 Query: 531 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 590 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 918 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 859 Query: 591 agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaactt 644 ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 858 agtaagctgaccctttgaatcacggctggttccacatttctcattaataaactt 805
>dbj|AK099341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028P21, full insert sequence Length = 1528 Score = 307 bits (155), Expect = 2e-80 Identities = 307/357 (85%), Gaps = 3/357 (0%) Strand = Plus / Minus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1162 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1103 Query: 351 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 410 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1102 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1043 Query: 411 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgc---ttgacagc 467 |||||||| || |||||||||||| |||||||||||||||||||| | ||| |||| Sbjct: 1042 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacctgttggcagc 983 Query: 468 aggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtc 527 ||| ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| || Sbjct: 982 agggccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatc 923 Query: 528 atcagcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctc 587 || || |||| |||| ||||| ||||||| | |||| ||| | |||| |||||||| Sbjct: 922 atttgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctc 863 Query: 588 tgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaactt 644 |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 862 tgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaactt 806
>gb|AY739289.1| Zea mays protein disulfide isomerase (PDIL2-2) mRNA, complete cds Length = 1408 Score = 246 bits (124), Expect = 8e-62 Identities = 289/344 (84%) Strand = Plus / Minus Query: 307 gaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctcc 366 ||||||||||||||||| | | ||||||||| ||||||||||||||||| ||||||||| Sbjct: 1093 gaaagaatgttcttcttaacgatgaattcatcagctttggaaggactgattgacttctcc 1034 Query: 367 aacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctgcaatatc 426 | || ||| || ||||||||||| |||||||| || |||||||||||||| | | ||| Sbjct: 1033 agcatgcggtgaagcctctcagtctccttcttagtgtagtcagagcccttgtctatgatc 974 Query: 427 ttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactgagctttgca 486 ||||||||| | ||||||| |||||||| |||||| | |||| ||| |||||||| ||| Sbjct: 973 ttctttgcagctgtcacatatatctttccatgcttggctgcagaaccgctgagcttagca 914 Query: 487 gcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggcactgtggaaa 546 | |||||||| ||||||||||||| ||||||||||||||||||||| ||| || | || Sbjct: 913 acatcctcttctattttagagaggacttccttccgcttgtcatcagcagcattgagaaac 854 Query: 547 tccttgacaagagcatccaaacttgccacaagcccagcctctgaagtaagctgacccttt 606 ||||| ||||||| || ||| |||| |||||||||||||||| | | || || |||||| Sbjct: 853 tccttcacaagaggattcaagcttggcacaagcccagcctcttgattcaggtggcccttt 794 Query: 607 gaatcacggctagttccacttttctcattaatgaacttaacaaa 650 | ||| ||||| || |||| ||||||||||||||||| ||||| Sbjct: 793 ggatcccggctggtgccacacttctcattaatgaacttgacaaa 750
>gb|BT016699.1| Zea mays clone Contig532 mRNA sequence Length = 1425 Score = 238 bits (120), Expect = 2e-59 Identities = 288/344 (83%) Strand = Plus / Minus Query: 307 gaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctcc 366 ||||||||||||||||| | | ||||||||| ||||||||||||||||| ||||||||| Sbjct: 1088 gaaagaatgttcttcttaacgatgaattcatcagctttggaaggactgattgacttctcc 1029 Query: 367 aacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctgcaatatc 426 | || ||| || ||||||||||| |||||||| || |||||||||||||| | | ||| Sbjct: 1028 agcatgcggtgaagcctctcagtctccttcttagtgtagtcagagcccttgtctatgatc 969 Query: 427 ttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactgagctttgca 486 ||||||||| | ||||||| |||||||| |||||| | |||| ||| |||||||| ||| Sbjct: 968 ttctttgcagctgtcacatatatctttccatgcttggctgcagaaccgctgagcttagca 909 Query: 487 gcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggcactgtggaaa 546 | |||||||| ||||||||||||| ||||||||||||||||||||| ||| || | || Sbjct: 908 acatcctcttctattttagagaggacttccttccgcttgtcatcagcagcattgagaaac 849 Query: 547 tccttgacaagagcatccaaacttgccacaagcccagcctctgaagtaagctgacccttt 606 ||||| ||||||| || ||| |||| |||||||||||||||| | | || || ||||| Sbjct: 848 tccttcacaagaggattcaagcttggcacaagcccagcctcttgattcaggtgggccttt 789 Query: 607 gaatcacggctagttccacttttctcattaatgaacttaacaaa 650 | ||| ||||| || |||| ||||||||||||||||| ||||| Sbjct: 788 ggatcccggctggtgccacacttctcattaatgaacttgacaaa 745
>ref|NM_183927.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 123 bits (62), Expect = 8e-25 Identities = 170/206 (82%) Strand = Plus / Minus Query: 445 tagatctttccgtgcttgacagcaggaccactgagctttgcagcctcctcttcaatttta 504 |||| |||||| ||||| |||||| |||||||||||| || |||||||||| || || Sbjct: 962 tagacctttccatgctttgcagcagaaccactgagcttcacaacctcctcttccatattg 903 Query: 505 gagaggatttccttccgcttgtcatcagcggcactgtggaaatccttgacaagagcatcc 564 ||||||||||||||||||||||||| || |||| |||| ||||| | || |||||| Sbjct: 902 gagaggatttccttccgcttgtcattggcagcaccaaggaactcctttgcgagggcatcc 843 Query: 565 aaacttgccacaagcccagcctctgaagtaagctgaccctttgaatcacggctagttcca 624 |||||||| | |||| |||||||||||||| || ||||| | ||||||||| || ||| Sbjct: 842 aaacttgctatgcgccccgcctctgaagtaagttggcccttagtatcacggctggtacca 783 Query: 625 cttttctcattaatgaacttaacaaa 650 | ||||||||||||||||| ||||| Sbjct: 782 cacttctcattaatgaacttgacaaa 757 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 306 tgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctc 365 |||||| | ||||||||||||| |||||||||||| || || || ||||| |||||||| Sbjct: 1101 tgaaaggacgttcttcttgatgatgaattcatcggcctttgatgggctgatggacttctc 1042 Query: 366 caacaagcgatggagcctctcagtttccttctttgtatagtc 407 ||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 1041 caacatgcgttcaagcctctctgtttccttcttggtatagtc 1000
>dbj|AK066111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J24, full insert sequence Length = 1549 Score = 123 bits (62), Expect = 8e-25 Identities = 170/206 (82%) Strand = Plus / Minus Query: 445 tagatctttccgtgcttgacagcaggaccactgagctttgcagcctcctcttcaatttta 504 |||| |||||| ||||| |||||| |||||||||||| || |||||||||| || || Sbjct: 1075 tagacctttccatgctttgcagcagaaccactgagcttcacaacctcctcttccatattg 1016 Query: 505 gagaggatttccttccgcttgtcatcagcggcactgtggaaatccttgacaagagcatcc 564 ||||||||||||||||||||||||| || |||| |||| ||||| | || |||||| Sbjct: 1015 gagaggatttccttccgcttgtcattggcagcaccaaggaactcctttgcgagggcatcc 956 Query: 565 aaacttgccacaagcccagcctctgaagtaagctgaccctttgaatcacggctagttcca 624 |||||||| | |||| |||||||||||||| || ||||| | ||||||||| || ||| Sbjct: 955 aaacttgctatgcgccccgcctctgaagtaagttggcccttagtatcacggctggtacca 896 Query: 625 cttttctcattaatgaacttaacaaa 650 | ||||||||||||||||| ||||| Sbjct: 895 cacttctcattaatgaacttgacaaa 870 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 306 tgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctc 365 |||||| | ||||||||||||| |||||||||||| || || || ||||| |||||||| Sbjct: 1214 tgaaaggacgttcttcttgatgatgaattcatcggcctttgatgggctgatggacttctc 1155 Query: 366 caacaagcgatggagcctctcagtttccttctttgtatagtc 407 ||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 1154 caacatgcgttcaagcctctctgtttccttcttggtatagtc 1113
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 112409 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 112468 Query: 351 actgatcgact 361 ||||||||||| Sbjct: 112469 actgatcgact 112479 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 360 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 419 ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| Sbjct: 112568 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 112627 Query: 420 caatatcttctttgcaacgttcacatagatctttccgt 457 || |||||||||||| |||||||||||||||||||| Sbjct: 112628 catgatcttctttgcagagttcacatagatctttccgt 112665 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 584 cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 643 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| Sbjct: 112960 cctctgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaact 113019 Query: 644 t 644 | Sbjct: 113020 t 113020
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 3234692 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 3234751 Query: 351 actgatcgact 361 ||||||||||| Sbjct: 3234752 actgatcgact 3234762 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 360 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 419 ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| Sbjct: 3234851 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 3234910 Query: 420 caatatcttctttgcaacgttcacatagatctttccgt 457 || |||||||||||| |||||||||||||||||||| Sbjct: 3234911 catgatcttctttgcagagttcacatagatctttccgt 3234948 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 584 cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 643 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| Sbjct: 3235243 cctctgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaact 3235302 Query: 644 t 644 | Sbjct: 3235303 t 3235303
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 291 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 350 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 28516 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 28575 Query: 351 actgatcgact 361 ||||||||||| Sbjct: 28576 actgatcgact 28586 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 360 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 419 ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| Sbjct: 28675 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 28734 Query: 420 caatatcttctttgcaacgttcacatagatctttccgt 457 || |||||||||||| |||||||||||||||||||| Sbjct: 28735 catgatcttctttgcagagttcacatagatctttccgt 28772 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 584 cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 643 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| Sbjct: 29067 cctctgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaact 29126 Query: 644 t 644 | Sbjct: 29127 t 29127
>gb|AY739288.1| Zea mays protein disulfide isomerase (PDIL2-1) mRNA, complete cds Length = 1447 Score = 89.7 bits (45), Expect = 1e-14 Identities = 276/353 (78%) Strand = Plus / Minus Query: 298 gagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatc 357 ||||||| ||||||| ||||||||||||| || || ||||| ||||| || ||||| Sbjct: 1117 gagaaagtcgaaagaacgttcttcttgatgataaactcgtcggccttggaggggctgatg 1058 Query: 358 gacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttc 417 ||||||||||| | ||||| ||||||| |||||||||| ||||| || ||| ||| Sbjct: 1057 gacttctccaagatgcgatcaagcctcttggtttccttctcagtatactcgttgcctttc 998 Query: 418 tgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactg 477 | | ||||||||||| | | | ||||||| |||||| ||| | |||||| ||||||| Sbjct: 997 tctagaatcttctttgcgatggttacatagacctttccatgccttgcagcagaaccactg 938 Query: 478 agctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggca 537 ||||| | |||||||| || || | ||||||| |||||| ||||||||| | | ||| Sbjct: 937 agcttatctgcctcctcctccatactggagaggacttcctttcgcttgtcaccggaagca 878 Query: 538 ctgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctgaagtaagc 597 | |||| ||||| | || |||||| |||||| | | | ||||||||||| || || Sbjct: 877 ccaaggaactccttagccaggacatccagacttgctatacggccagcctctgaggttagt 818 Query: 598 tgaccctttgaatcacggctagttccacttttctcattaatgaacttaacaaa 650 |||||||||| |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 817 tgaccctttgtgtcacggctggtaccactcttctcgttaatgaacttgacaaa 765
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 464 cagcaggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgct 523 |||||| |||||||||||| || |||||||||| || || ||||||||||||||||||| Sbjct: 13339689 cagcagaaccactgagcttcacaacctcctcttccatattggagaggatttccttccgct 13339630 Query: 524 tgtcat 529 |||||| Sbjct: 13339629 tgtcat 13339624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 584 cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 643 ||||||||||||| || ||||| | ||||||||| || |||| |||||||||||||||| Sbjct: 13339478 cctctgaagtaagttggcccttagtatcacggctggtaccacacttctcattaatgaact 13339419 Query: 644 taacaaa 650 | ||||| Sbjct: 13339418 tgacaaa 13339412 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Minus Query: 360 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtc 407 ||||||||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 13339884 cttctccaacatgcgttcaagcctctctgtttccttcttggtatagtc 13339837 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 306 tgaaagaatgttcttcttgatggcgaattcatcggc 341 |||||| | ||||||||||||| |||||||||||| Sbjct: 13340044 tgaaaggacgttcttcttgatgatgaattcatcggc 13340009
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 464 cagcaggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgct 523 |||||| |||||||||||| || |||||||||| || || ||||||||||||||||||| Sbjct: 80047 cagcagaaccactgagcttcacaacctcctcttccatattggagaggatttccttccgct 79988 Query: 524 tgtcat 529 |||||| Sbjct: 79987 tgtcat 79982 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 584 cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 643 ||||||||||||| || ||||| | ||||||||| || |||| |||||||||||||||| Sbjct: 79836 cctctgaagtaagttggcccttagtatcacggctggtaccacacttctcattaatgaact 79777 Query: 644 taacaaa 650 | ||||| Sbjct: 79776 tgacaaa 79770 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Minus Query: 360 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtc 407 ||||||||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 80242 cttctccaacatgcgttcaagcctctctgtttccttcttggtatagtc 80195 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 306 tgaaagaatgttcttcttgatggcgaattcatcggc 341 |||||| | ||||||||||||| |||||||||||| Sbjct: 80402 tgaaaggacgttcttcttgatgatgaattcatcggc 80367
>gb|DQ222488.1| Solanum tuberosum clone 098B03 disulfide-isomerase precursor-like protein mRNA, complete cds Length = 1408 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 583 gcctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaac 642 |||| |||||||| ||| || ||||||||||||||||| |||| |||||||| ||||| Sbjct: 847 gcctttgaagtaaactgtccttttgaatcacggctagtgccacacttctcattgatgaaa 788 Query: 643 ttaacaaa 650 || ||||| Sbjct: 787 ttgacaaa 780
>emb|CR788228.11| Zebrafish DNA sequence from clone CH211-15N4 in linkage group 3, complete sequence Length = 156998 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttgagtaaactcttaaagagt 81 ||||||||||||||||||||| Sbjct: 3719 ttgagtaaactcttaaagagt 3699
>emb|Z99495.1|HS441J1 Human DNA sequence from clone RP3-441J1 on chromosome 6p24 Contains the 5' end of gene KIAA1733, complete sequence Length = 151213 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 tagttccacttttctcattaa 637 ||||||||||||||||||||| Sbjct: 82816 tagttccacttttctcattaa 82836
>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174974 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 tcaccagatggtactgtttgttcttgagt 66 |||||||||||||||| ||| |||||||| Sbjct: 67976 tcaccagatggtactgattgctcttgagt 67948
>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence Length = 184396 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ctctattttccttttgtcttt 207 ||||||||||||||||||||| Sbjct: 74038 ctctattttccttttgtcttt 74018
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence Length = 141422 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 tccttttgtctttcttcgcttctct 219 ||||||||||||||||| ||||||| Sbjct: 83077 tccttttgtctttcttctcttctct 83101
>emb|BX296558.8| Zebrafish DNA sequence from clone CH211-261N20 in linkage group 3, complete sequence Length = 151242 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttgagtaaactcttaaagagt 81 ||||||||||||||||||||| Sbjct: 148900 ttgagtaaactcttaaagagt 148880
>gb|AC142293.2| Homo sapiens fosmid clone XXFOS-8806F2 from 4, complete sequence Length = 32823 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 ctgcaatatcttctttgcaac 437 ||||||||||||||||||||| Sbjct: 18966 ctgcaatatcttctttgcaac 18946
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete sequence Length = 169465 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 173 gccatctctctaatctctattttcctttt 201 |||||||||||| |||| ||||||||||| Sbjct: 135130 gccatctctctagtctccattttcctttt 135102
>gb|AC166823.3| Mus musculus BAC clone RP23-435F22 from chromosome 14, complete sequence Length = 221537 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 acatgttgttcaacagagaa 137 |||||||||||||||||||| Sbjct: 169248 acatgttgttcaacagagaa 169267
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence Length = 197609 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 taatctctattttccttttgtctt 206 |||||| ||||||||||||||||| Sbjct: 43611 taatctttattttccttttgtctt 43588
>ref|XM_477491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aatgttcttcttgatggcga 331 |||||||||||||||||||| Sbjct: 1435 aatgttcttcttgatggcga 1454
>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence Length = 200891 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcagtttccttctttgtata 404 |||||||||||||||||||| Sbjct: 198845 tcagtttccttctttgtata 198864
>gb|AF259073.1| Mus musculus T-cell receptor alpha locus BAC clone MBAC15 from 14D1-D2, complete sequence Length = 31638 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 acatgttgttcaacagagaa 137 |||||||||||||||||||| Sbjct: 9175 acatgttgttcaacagagaa 9194
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tattttccttttgtctttct 209 |||||||||||||||||||| Sbjct: 1851099 tattttccttttgtctttct 1851080
>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete sequence Length = 202850 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 accataaaagtaaatcacat 121 |||||||||||||||||||| Sbjct: 135657 accataaaagtaaatcacat 135676
>gb|BC043952.1| Xenopus laevis similar to chromosome 20 open reading frame 6 (human), mRNA (cDNA clone IMAGE:5570650), partial cds Length = 1703 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 attttccttttgtctttctt 210 |||||||||||||||||||| Sbjct: 1662 attttccttttgtctttctt 1643
>gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosome 14, complete sequence Length = 194924 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 acatgttgttcaacagagaa 137 |||||||||||||||||||| Sbjct: 180409 acatgttgttcaacagagaa 180390
>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence Length = 234064 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcagtttccttctttgtata 404 |||||||||||||||||||| Sbjct: 96200 tcagtttccttctttgtata 96181
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence Length = 257003 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 catctctctaatctctattt 194 |||||||||||||||||||| Sbjct: 213250 catctctctaatctctattt 213269
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 catctctctaatctctattt 194 |||||||||||||||||||| Sbjct: 124415 catctctctaatctctattt 124396
>gb|AC005236.4| Homo sapiens BAC clone RP11-479C13 from 7, complete sequence Length = 87593 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 cgatggagcctctcagtttc 392 |||||||||||||||||||| Sbjct: 34205 cgatggagcctctcagtttc 34186
>gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complete sequence Length = 151874 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ataaaagtaaatcacatgtt 124 |||||||||||||||||||| Sbjct: 121581 ataaaagtaaatcacatgtt 121562
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ttctttgcaacgttcacata 446 |||||||||||||||||||| Sbjct: 19319 ttctttgcaacgttcacata 19338
>gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, complete sequence Length = 185534 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcagtttccttctttgtata 404 |||||||||||||||||||| Sbjct: 182094 tcagtttccttctttgtata 182075
>emb|AL953860.3| Human DNA sequence from clone RP5-1107B12 on chromosome X Contains the 5' end of a novel gene (MGC44287), complete sequence Length = 46890 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctattttccttttgtcttt 207 |||||||||||||||||||| Sbjct: 28163 tctattttccttttgtcttt 28144
>emb|AL035661.16|HS568C11 Human DNA sequence from clone RP4-568C11 on chromosome 20p11.21-11.23 Contains the CST7 gene for cystatin F (leukocystatin)(cystatin 7, leukocystatin, cystatin-like metastasis-associated protein, CMAP), the gene C20ORF3 for chromosome 20 open reading frame 3, the 3' end of the ACAS2L gene for acetyl-Coenzyme A synthetase (AMP forming)-like and a CpG island, complete sequence Length = 103681 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 aaatccctgtataaccataaaagt 112 |||||||||||||||||| ||||| Sbjct: 5746 aaatccctgtataaccattaaagt 5769
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4 Contains a novel gene, an actin, beta (ACTB) pseudogene and a CpG island, complete sequence Length = 123637 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tctattttccttttgtcttt 207 |||||||||||||||||||| Sbjct: 84210 tctattttccttttgtcttt 84229
>gb|AC173999.3| Pan troglodytes BAC clone CH251-530E14 from chromosome 7, complete sequence Length = 166256 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cgatggagcctctcagtttc 392 |||||||||||||||||||| Sbjct: 117527 cgatggagcctctcagtttc 117546
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tcaacagagaaccaaacaga 146 |||||||||||||||||||| Sbjct: 122565 tcaacagagaaccaaacaga 122584
>dbj|AK127865.1| Homo sapiens cDNA FLJ45968 fis, clone PLACE7016321 Length = 3889 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ctgtataaccataaaagtaa 114 |||||||||||||||||||| Sbjct: 2484 ctgtataaccataaaagtaa 2465
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178239 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tcaacagagaaccaaacaga 146 |||||||||||||||||||| Sbjct: 170960 tcaacagagaaccaaacaga 170979
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gataatctatcgccgctaaa 164 |||||||||||||||||||| Sbjct: 3697592 gataatctatcgccgctaaa 3697611
>gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 180685 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 gctagttccacttttctcat 634 |||||||||||||||||||| Sbjct: 18655 gctagttccacttttctcat 18674
>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145969 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ttttccttttgtctttcttc 211 |||||||||||||||||||| Sbjct: 35791 ttttccttttgtctttcttc 35772
>gb|AC090096.5| Homo sapiens chromosome 8, clone RP11-159C14, complete sequence Length = 173158 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 accataaaagtaaatcacat 121 |||||||||||||||||||| Sbjct: 107023 accataaaagtaaatcacat 107042
>gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complete sequence Length = 130284 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cgatggagcctctcagtttc 392 |||||||||||||||||||| Sbjct: 79691 cgatggagcctctcagtttc 79710
>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus section 1 of 4 of the complete region Length = 404892 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 acatgttgttcaacagagaa 137 |||||||||||||||||||| Sbjct: 365950 acatgttgttcaacagagaa 365969
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence Length = 227245 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tctctctaatctctattttc 196 |||||||||||||||||||| Sbjct: 120017 tctctctaatctctattttc 120036
>dbj|AK052063.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230040N22 product:unclassifiable, full insert sequence Length = 3051 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 aatctctattttccttttgtcttt 207 |||||||||||||||||| ||||| Sbjct: 1955 aatctctattttccttttttcttt 1978
>gb|AC024941.30|AC024941 Homo sapiens 12 BAC RP11-900F13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172246 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ctgtataaccataaaagtaa 114 |||||||||||||||||||| Sbjct: 125652 ctgtataaccataaaagtaa 125633
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aatgttcttcttgatggcga 331 |||||||||||||||||||| Sbjct: 10843881 aatgttcttcttgatggcga 10843862
>gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complete sequence Length = 156083 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ttttccttttgtctttcttc 211 |||||||||||||||||||| Sbjct: 31068 ttttccttttgtctttcttc 31087
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence Length = 175222 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 accataaaagtaaatcacat 121 |||||||||||||||||||| Sbjct: 92695 accataaaagtaaatcacat 92714
>gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, complete sequence Length = 179517 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 accataaaagtaaatcacat 121 |||||||||||||||||||| Sbjct: 47726 accataaaagtaaatcacat 47707
>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence Length = 155702 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 accataaaagtaaatcacat 121 |||||||||||||||||||| Sbjct: 31166 accataaaagtaaatcacat 31185
>gb|AC007546.6| Homo sapiens 12 BAC RP11-946P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168396 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ctctcagtttccttctttgt 401 |||||||||||||||||||| Sbjct: 99531 ctctcagtttccttctttgt 99550
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aatgttcttcttgatggcga 331 |||||||||||||||||||| Sbjct: 54640 aatgttcttcttgatggcga 54621
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aatgttcttcttgatggcga 331 |||||||||||||||||||| Sbjct: 20256 aatgttcttcttgatggcga 20237
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete sequences Length = 180152 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctaatctctattttcctttt 201 |||||||||||||||||||| Sbjct: 106801 ctaatctctattttcctttt 106782
>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete sequence Length = 226471 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 tttccttttgtctttcttcgcttc 216 ||||||||||||||||||| |||| Sbjct: 155009 tttccttttgtctttcttcccttc 155032
>emb|AJ277755.1|LPN277755 Legionella pneumophila serogroup 1, 30 kb instable genetic element Length = 29223 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tttgttcttgagtaaactct 73 |||||||||||||||||||| Sbjct: 25134 tttgttcttgagtaaactct 25153
>gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete sequence Length = 168360 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tattttccttttgtctttct 209 |||||||||||||||||||| Sbjct: 136830 tattttccttttgtctttct 136811
>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167642 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctattttccttttgtcttt 207 |||||||||||||||||||| Sbjct: 19346 tctattttccttttgtcttt 19327
>emb|AL162191.6|CNS01RHQ Human chromosome 14 DNA sequence BAC R-349D8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204662 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtctttcttcgcttctctct 221 |||||||||||||||||||| Sbjct: 118488 gtctttcttcgcttctctct 118469
>emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-724F15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192387 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 572 ccacaagcccagcctctgaagtaa 595 |||||||||||||||||| ||||| Sbjct: 63594 ccacaagcccagcctctgcagtaa 63617
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete sequence Length = 257692 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tcaacagagaaccaaacaga 146 |||||||||||||||||||| Sbjct: 181694 tcaacagagaaccaaacaga 181713
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctaatctctattttcctttt 201 |||||||||||||||||||| Sbjct: 163745 ctaatctctattttcctttt 163726
>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 aatctctattttccttttgtcttt 207 |||||||||||| ||||||||||| Sbjct: 92713 aatctctattttgcttttgtcttt 92736
>gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 from chromosome unknown, complete sequence Length = 145427 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ctgccatctctctaatctct 190 |||||||||||||||||||| Sbjct: 132985 ctgccatctctctaatctct 133004
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 aatctctattttccttttgtcttt 207 |||||||||||||||||| ||||| Sbjct: 107877 aatctctattttccttttttcttt 107854
>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence Length = 177716 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 taatctctattttccttttgtctt 206 |||||| ||||||||||||||||| Sbjct: 54513 taatctttattttccttttgtctt 54536
>emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 in linkage group 23, complete sequence Length = 65564 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 tttgtctttcttcgcttctctctt 222 ||||||||||||| |||||||||| Sbjct: 28480 tttgtctttcttctcttctctctt 28457
>gb|M80235.1|ALFGRERP Alfalfa glucose-regulated endoplasmic reticular protein mRNA, complete cds Length = 1478 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 580 ccagcctctgaagtaagctgaccctttgaatcacggctagttccacttttctcatt 635 |||||||| ||||||||||| || |||| ||| || || |||||| ||||||||| Sbjct: 844 ccagcctcagaagtaagctgtccttttgcatctcgacttgttccagatttctcatt 789
>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence Length = 262831 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcagtttccttctttgtata 404 |||||||||||||||||||| Sbjct: 26532 tcagtttccttctttgtata 26551
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cattaagaggagaaagctga 308 |||||||||||||||||||| Sbjct: 114715 cattaagaggagaaagctga 114734
>emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-214N1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 145035 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctattttccttttgtcttt 207 |||||||||||||||||||| Sbjct: 141287 tctattttccttttgtcttt 141268
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete sequence Length = 119311 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctattttccttttgtcttt 207 |||||||||||||||||||| Sbjct: 102482 tctattttccttttgtcttt 102463
>emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chromosome 2, complete sequence Length = 203592 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 agcggcactgtggaaatcct 550 |||||||||||||||||||| Sbjct: 83420 agcggcactgtggaaatcct 83401
>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:B330A3, complete sequence Length = 160920 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctaatctctattttcctttt 201 |||||||||||||||||||| Sbjct: 5144 ctaatctctattttcctttt 5125
>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 6/11 Length = 156909 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 aatctctattttccttttgtcttt 207 |||||||||||| ||||||||||| Sbjct: 40282 aatctctattttgcttttgtcttt 40305 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,975,371 Number of Sequences: 3902068 Number of extensions: 6975371 Number of successful extensions: 146753 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 146356 Number of HSP's gapped (non-prelim): 386 length of query: 650 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 627 effective length of database: 17,143,297,704 effective search space: 10748847660408 effective search space used: 10748847660408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)