ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS4_MAIZE (O22424) 40S ribosomal protein S4 119 5e-27
2RS4_SOLTU (P46300) 40S ribosomal protein S4 115 6e-26
3RS4_ARATH (P49204) 40S ribosomal protein S4 114 1e-25
4RS4_PRUAR (O81363) 40S ribosomal protein S4 114 2e-25
5RS4_GOSHI (P46299) 40S ribosomal protein S4 112 4e-25
6RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620) 95 1e-22
7RS4_XENTR (Q6PBC4) 40S ribosomal protein S4 91 1e-18
8RS4_XENLA (P49401) 40S ribosomal protein S4 91 1e-18
9RS4_CRIGR (P47961) 40S ribosomal protein S4 91 1e-18
10RS4_CHICK (P47836) 40S ribosomal protein S4 91 1e-18
11RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1 91 1e-18
12RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform 91 1e-18
13RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform 91 1e-18
14RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform 91 1e-18
15RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform 91 1e-18
16RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform 91 1e-18
17RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single ... 91 1e-18
18RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform 91 1e-18
19RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform 91 1e-18
20RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1 89 4e-18
21RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1 89 6e-18
22RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1 89 7e-18
23RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform 89 7e-18
24RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1 88 1e-17
25RS4_DROME (P41042) 40S ribosomal protein S4 88 1e-17
26RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1 87 2e-17
27RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1 87 2e-17
28RS4_ICTPU (Q90YS0) 40S ribosomal protein S4 86 5e-17
29RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2 86 6e-17
30RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2 85 1e-16
31RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B 84 2e-16
32RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C 83 4e-16
33RS4A_SCHPO (P87158) 40S ribosomal protein S4-A 83 4e-16
34RS4_YARLI (O59950) 40S ribosomal protein S4 (S7) 76 4e-14
35RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5) 73 4e-13
36RS4_DICDI (P51405) 40S ribosomal protein S4 71 2e-12
37RS4_CANAL (P47837) 40S ribosomal protein S4 (S7) 70 2e-12
38RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4 70 3e-12
39FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (... 32 1.1
40Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977 31 1.4
41TRPG_CRYNE (Q5KC22) Anthranilate synthase component 2 (EC 4.1.3.... 28 9.1 
>RS4_MAIZE (O22424) 40S ribosomal protein S4|
          Length = 265

 Score =  119 bits (297), Expect = 5e-27
 Identities = 60/90 (66%), Positives = 64/90 (71%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK V F KF                  VIK RE HKG+FE IHVED+ GHQFATR+GNVF
Sbjct: 167 NKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVF 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKRD 199
           TIGKG KPWVSLPKGKGIKL+IIEEQRKRD
Sbjct: 227 TIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256
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>RS4_SOLTU (P46300) 40S ribosomal protein S4|
          Length = 264

 Score =  115 bits (288), Expect = 6e-26
 Identities = 56/89 (62%), Positives = 64/89 (71%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK V F KF                  VIK RE HKG+FE +H++D+QGH+FATRLGNVF
Sbjct: 167 NKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVF 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           T+GKGTKPWVSLPKGKGIKLTIIE+ RKR
Sbjct: 227 TLGKGTKPWVSLPKGKGIKLTIIEDARKR 255
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>RS4_ARATH (P49204) 40S ribosomal protein S4|
          Length = 262

 Score =  114 bits (286), Expect = 1e-25
 Identities = 57/89 (64%), Positives = 63/89 (70%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK V F KF                  VIK RE HKG+FE IH++D+ GH+FATRLGNV+
Sbjct: 167 NKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVY 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           TIGKGTKPWVSLPKGKGIKLTIIEE RKR
Sbjct: 227 TIGKGTKPWVSLPKGKGIKLTIIEEARKR 255
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>RS4_PRUAR (O81363) 40S ribosomal protein S4|
          Length = 261

 Score =  114 bits (284), Expect = 2e-25
 Identities = 57/89 (64%), Positives = 62/89 (69%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK   F KF                  VIK RE HKG+FE IHV+DA GH+FATRLGNVF
Sbjct: 163 NKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVF 222

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           TIGKGTKPWVSLPKGKGIKLTI+EE +KR
Sbjct: 223 TIGKGTKPWVSLPKGKGIKLTILEEAKKR 251
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>RS4_GOSHI (P46299) 40S ribosomal protein S4|
          Length = 262

 Score =  112 bits (281), Expect = 4e-25
 Identities = 58/89 (65%), Positives = 62/89 (69%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK V F KF                  VIK RE HKG+FE IHV+DA GH+FATRLGNVF
Sbjct: 167 NKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVF 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           TIGKGTKPWVSLPK KGIKL+IIEE RKR
Sbjct: 227 TIGKGTKPWVSLPKRKGIKLSIIEEARKR 255
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>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)|
          Length = 268

 Score = 94.7 bits (234), Expect(2) = 1e-22
 Identities = 44/49 (89%), Positives = 46/49 (93%)
 Frame = -3

Query: 363 KGTFEXIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 217
           KG+FE IHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE
Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253



 Score = 30.4 bits (67), Expect(2) = 1e-22
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -2

Query: 469 QQXCXLHXVXRRQRRHGXWWAQHWACWCDQXQGXA*GN 356
           QQ   LH        HG W  ++ A WCDQ QG A G+
Sbjct: 171 QQELRLHQGLMLAMCHGDW-RRNTAVWCDQQQGEAKGS 207
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>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_XENLA (P49401) 40S ribosomal protein S4|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_CRIGR (P47961) 40S ribosomal protein S4|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_CHICK (P47836) 40S ribosomal protein S4|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant|
           mRNA protein) (SCR10)
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 42/88 (47%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K + F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LT+ EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAEERDKR 254
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>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 42/88 (47%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K + F KF                  VI  RE H G+F+ +HV+DA G+ FATR+ N+F 
Sbjct: 167 KIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 41/88 (46%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K + F KF                  VI  RE H G+F+ +HV+DA G+ FATR+ N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LT+ EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAEERDKR 254
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>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 43/88 (48%), Positives = 54/88 (61%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+D+ G+ FATRL N+F 
Sbjct: 167 KITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG KPWVSLP+GKG++LTI EE+ KR
Sbjct: 227 IGKGNKPWVSLPRGKGVRLTIAEERDKR 254
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>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 42/88 (47%), Positives = 53/88 (60%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+DA G+ FATR+ N+F 
Sbjct: 167 KITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_DROME (P41042) 40S ribosomal protein S4|
          Length = 261

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 38/58 (65%), Positives = 49/58 (84%)
 Frame = -3

Query: 375 REXHKGTFEXIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           RE H G+F+ +H++D+QGH FATRL NVF IGKG KP++SLPKGKG+KL+I EE+ KR
Sbjct: 198 RERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKR 255
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>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 41/88 (46%), Positives = 53/88 (60%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K + F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LT+  E+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAAERDKR 254
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>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 41/88 (46%), Positives = 53/88 (60%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K + F KF                  VI  RE H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LT+  E+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAAERDKR 254
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>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4|
          Length = 262

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 42/88 (47%), Positives = 53/88 (60%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+F+ +HV+D+ G+ FATRL N+F 
Sbjct: 167 KITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IGKG K WVS+P+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKAWVSIPRGKGIRLTIAEERDKR 254
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>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score = 85.5 bits (210), Expect = 6e-17
 Identities = 41/88 (46%), Positives = 52/88 (59%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE H G+ + +HV+DA G+ FATR+ N+F 
Sbjct: 167 KITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 40/88 (45%), Positives = 52/88 (59%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  V+  RE H G+ + +HV+DA G+ FATR+ N+F 
Sbjct: 167 KITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B|
          Length = 262

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 51/89 (57%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK   F KF                   I  RE H G+FE IHV+DA   +FATRL NVF
Sbjct: 167 NKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVF 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
            IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 227 VIGEAGKSWISLPKGKGVKLSITEERDRR 255
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>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C|
          Length = 262

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/89 (47%), Positives = 51/89 (57%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK   F KF                   I  RE H G+FE IHV+DA   +FATRL NVF
Sbjct: 167 NKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVF 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
            IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 227 VIGETGKSWISLPKGKGVKLSITEERDRR 255
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>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A|
          Length = 262

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/89 (47%), Positives = 51/89 (57%)
 Frame = -3

Query: 468 NKXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVF 289
           NK   F KF                   I  RE H G+FE IHV+DA   +FATRL NVF
Sbjct: 167 NKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVF 226

Query: 288 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
            IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 227 VIGETGKSWISLPKGKGVKLSITEERDRR 255
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>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)|
          Length = 260

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 39/88 (44%), Positives = 49/88 (55%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                   I  RE H+G F+ +H++DA  +QF TRL NVF 
Sbjct: 168 KITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFV 227

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG+G K  +SLPKGKGIKL+I EE+  R
Sbjct: 228 IGEGNKSLISLPKGKGIKLSIAEERDAR 255
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>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)|
          Length = 260

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 36/88 (40%), Positives = 49/88 (55%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                   I  +E H G F+ +H++D+  + F TRL NVF 
Sbjct: 167 KITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFV 226

Query: 285 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG+  KP++SLPKGKGIKL+I EE+ +R
Sbjct: 227 IGEQGKPYISLPKGKGIKLSIAEERDRR 254
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>RS4_DICDI (P51405) 40S ribosomal protein S4|
          Length = 266

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 30/58 (51%), Positives = 43/58 (74%)
 Frame = -3

Query: 384 IKXREXHKGTFEXIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQ 211
           +  RE H G+F+ +HV D  GHQFATRL NVF IGK ++ +VSLP GKG++ + ++E+
Sbjct: 194 VTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDER 251
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>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)|
          Length = 262

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -3

Query: 465 KXVXFXKFXXXXXXXXXXXXXXXXXXVIKXREXHKGTFEXIHVEDAQGHQFATRLGNVFT 286
           K   F KF                  VI  RE  +G F+ +H++DA  + F TRL NVF 
Sbjct: 168 KIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFV 227

Query: 285 IG-KGTKPWVSLPKGKGIKLTIIEEQRKR 202
           IG +  KPWVSLPKGKGIKL+I EE+ +R
Sbjct: 228 IGTEAGKPWVSLPKGKGIKLSISEERDRR 256
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>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4|
          Length = 259

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = -3

Query: 384 IKXREXHKGTFEXIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I  RE   G  + IH++D+ GH FATR+ NVF IGKG K  VSLP G GI+L+I EE+ K
Sbjct: 194 IGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254
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>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin|
           resistance protein)
          Length = 154

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -3

Query: 384 IKXREXHKGTFEXIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 244
           +K R+ H+G  + I+  D  GH+F    G+VF      +  KP +S  +G
Sbjct: 95  LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
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>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977|
          Length = 199

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
 Frame = +1

Query: 283 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 372
           NG H      V + GGKL  +G+L  D LKGSL +L
Sbjct: 36  NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
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>TRPG_CRYNE (Q5KC22) Anthranilate synthase component 2 (EC 4.1.3.27)|
           (Anthranilate synthase component II) [Includes:
           Glutamine amidotransferase; Indole-3-glycerol phosphate
           synthase (EC 4.1.1.48) (IGPS);
           N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3
          Length = 752

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +1

Query: 220 NDGELDTLAL--GEAHPRLGALANGEHVAQTGGKLVTLGILN-----VDGLKGSLMLLPV 378
           +DGEL+ + +  G  HPR  +  + + +A   GKL  LG+       VD L G +     
Sbjct: 46  SDGELERIVISPGPGHPRTDSGVSRDVIAWGMGKLPILGVCMGLECIVDLLGGEIAYAGE 105

Query: 379 LDHTNTPSVAPTXHHDDV 432
           + H  T  V     HD +
Sbjct: 106 IKHGKTSLV----QHDSI 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,627,033
Number of Sequences: 219361
Number of extensions: 1202123
Number of successful extensions: 3095
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3094
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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