>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score =  232 bits (592), Expect = 5e-61
 Identities = 109/112 (97%), Positives = 112/112 (100%)
 Frame = -3

Query: 562  EPVPPKVMKHKETSWTVWDRWSVKGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFAR 383
            EPVPPKVMKHKETSWTVWDRWSV+GNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFAR
Sbjct: 942  EPVPPKVMKHKETSWTVWDRWSVQGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFAR 1001

Query: 382  HKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR 227
            HKDRLTKKV+DIA+EVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR
Sbjct: 1002 HKDRLTKKVVDIAREVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR 1053

>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score =  192 bits (487), Expect = 7e-49
 Identities = 84/112 (75%), Positives = 101/112 (90%)
 Frame = -3

Query: 562  EPVPPKVMKHKETSWTVWDRWSVKGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFAR 383
            EPVPPK +KH+E SWTVWDRW+V GN+TL ELL+W  +KGL AYSISCGTSLLYN+MF R
Sbjct: 940  EPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPR 999

Query: 382  HKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR 227
            HK+RL +KV+D+A+EVAK++VP YRRHLD+ VACED+D+NDVDIPLVSVYFR
Sbjct: 1000 HKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYFR 1051

>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score =  192 bits (487), Expect = 7e-49
 Identities = 84/112 (75%), Positives = 101/112 (90%)
 Frame = -3

Query: 562  EPVPPKVMKHKETSWTVWDRWSVKGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFAR 383
            EPVPPK +KH+E SWTVWDRW+V GN+TL ELL+W  +KGL AYSISCGTSLLYN+MF R
Sbjct: 940  EPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPR 999

Query: 382  HKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR 227
            HK+RL +KV+D+A+EVAK++VP YRRHLD+ VACED+D+NDVDIPLVSVYFR
Sbjct: 1000 HKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYFR 1051

>UBA1_CANAL (P52495) Ubiquitin-activating enzyme E1 1 (Fragment)|
          Length = 205

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
 Frame = -3

Query: 562 EPVPPKVMKHKETSWT-VWDRWSVKGNLTLAELLQWFA-DKGLTAYSISCGTSLLYNNMF 389
           EP+     K+    +  +WDR+ + G++TL ELL  F  ++GLT   +S G SLLY + F
Sbjct: 91  EPIKSPEGKYNNKKFDQIWDRFELNGDITLQELLDHFEKEEGLTISMLSYGVSLLYASFF 150

Query: 388 A--RHKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSV 236
              + KDRL  K+  + KEV+K +VP + ++L   + C+DE+  DV++P + V
Sbjct: 151 PPKKVKDRLGLKLTSLIKEVSKKEVPSHVKNLIFEICCDDEEGEDVEVPYICV 203

>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1|
          Length = 1024

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
 Frame = -3

Query: 562  EPVP-PKVMKHKETSWTVWDRWSVKGNLTLAELLQWFA-DKGLTAYSISCGTSLLYNNMF 389
            EP+  PK   + +    +WDR+ +KG++ L++L++ F  D+GL    +S G SLLY + F
Sbjct: 910  EPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYGVSLLYASFF 969

Query: 388  A--RHKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVY 233
               + K+RL   +  + K V K D+P +   + + +  +D++  DV++P ++++
Sbjct: 970  PPKKLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITIH 1023

>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport|
            protein 3)
          Length = 1012

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 32/108 (29%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = -3

Query: 550  PKVMKHKETSWTVWDRWSVKGNLTLAELLQWFA-DKGLTAYSISCGTSLLYNNMFARHK- 377
            PK+  + +    +WDR+++  + TL EL+ +F  ++GL    +S G SLLY N     K 
Sbjct: 904  PKMKVNGKEIDKIWDRYNLP-DCTLQELIDYFQKEEGLEVTMLSSGVSLLYANFQPPKKL 962

Query: 376  -DRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSV 236
             +RL  K+ ++ +++ K  +  +R+HL + + C+D +  DV++P + +
Sbjct: 963  AERLPLKISELVEQITKKKLEPFRKHLVLEICCDDANGEDVEVPFICI 1010

>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1|
          Length = 1058

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
 Frame = -3

Query: 562  EPVPPKVMKHKETSWTVWDRWSVKG------NLTLAELLQWF-ADKGLTAYSISCGTSLL 404
            EP+     ++    WT+WDR+ V+G       +TL + L +F  +  L    +S G S+L
Sbjct: 938  EPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSML 997

Query: 403  YNNMF--ARHKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYF 230
            Y+     A+ K+RL + + +I   V+K  +  + R L + + C DE   DV++P V    
Sbjct: 998  YSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYVRYTI 1057

Query: 229  R 227
            R
Sbjct: 1058 R 1058

>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1|
          Length = 1058

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
 Frame = -3

Query: 562  EPVPPKVMKHKETSWTVWDRWSVKG------NLTLAELLQWF-ADKGLTAYSISCGTSLL 404
            EP+     ++    WT+WDR+ V+G       +TL + L +F  +  L    +S G S+L
Sbjct: 938  EPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSML 997

Query: 403  YNNMF--ARHKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYF 230
            Y+     A+ K+RL + + +I   V+K  +  + R L + + C DE   DV++P V    
Sbjct: 998  YSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYVRYTI 1057

Query: 229  R 227
            R
Sbjct: 1058 R 1058

>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)|
          Length = 1058

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
 Frame = -3

Query: 562  EPVPPKVMKHKETSWTVWDRWSVKG------NLTLAELLQWF-ADKGLTAYSISCGTSLL 404
            EP+     ++    WT+WDR+ V+G       +TL + L +F  +  L    +S G S+L
Sbjct: 938  EPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSML 997

Query: 403  YNNMF--ARHKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYF 230
            Y+     A+ K+RL + + +I   V+K  +  + R L + + C DE   DV++P V    
Sbjct: 998  YSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYVRYTI 1057

Query: 229  R 227
            R
Sbjct: 1058 R 1058

>UBE1Y_MOUSE (P31254) Ubiquitin-activating enzyme E1 Y (Fragment)|
          Length = 442

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
 Frame = -3

Query: 559 PVPPKVMKHKETSWTVWDRWSVKG------NLTLAELLQWF-ADKGLTAYSISCGTSLLY 401
           P+ P+  +  +  WT+WDR+ V+G       +TL + L +F  +  L    +S G S+LY
Sbjct: 323 PLAPECHQFYDQEWTLWDRFDVQGLQPSGEEMTLKQFLDYFKTEHKLEVIMLSQGVSMLY 382

Query: 400 NNMF--ARHKDRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR 227
           +     ++ K+RL + + +I   V+K  +  + + L   + C  +  +D+++P V    R
Sbjct: 383 SVFMPASKLKERLDQPMTEIVSCVSKQKLGHHVKSLVFELCCNSDSGDDIEVPYVRYIIR 442

>UBE1X_MOUSE (P31253) Ubiquitin-activating enzyme E1 X (Fragment)|
          Length = 450

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
 Frame = -3

Query: 562 EPVPPKVMKHKETSWTVWDRWSVKG------NLTLAELLQWF-ADKGLTAYSISCGTSLL 404
           EP+     ++    WT+WDR+ V+G       +TL + L +F  +  L    +S G S+L
Sbjct: 324 EPLAAPRHQYYNQEWTLWDRFEVQGVQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSML 383

Query: 403 YNNMF--ARHKDRLTKKVIDIAKEVAKVDVPEYRRH 302
           Y+     A+ K+RL + + +I   V+K  +  + RH
Sbjct: 384 YSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRH 419

>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
 Frame = -3

Query: 559  PVPPKVMKHKETSWTVWDRWSV---KGNLTLAELLQWFADK-GLTAYSISCGTSLLYNNM 392
            P  P +       WT WDR  V   +   TL  LL    ++ GL    +  G++LLY   
Sbjct: 897  PFAPAIQTFHHLKWTSWDRLKVPAGQPERTLESLLAHLQEQHGLRVRILLHGSALLYAAG 956

Query: 391  FARHK--DRLTKKVIDIAKEVAKVDVPEYRRHLDIGVACEDEDENDVDIPL 245
            ++  K    L  +V ++ +++        +R L + ++CE +DE+    PL
Sbjct: 957  WSPEKQAQHLPLRVTELVQQLTGQAPAPGQRVLVLELSCEGDDEDTAFPPL 1007

>RPOC_PELUB (Q4FLL3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1389

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 464  QELSQGEVALDGPPVPHGPARLLVLHDL 547
            +++ +GE  LDG P+PH   R+L + DL
Sbjct: 1194 EKIKKGEYLLDGQPLPHDILRILGIKDL 1221

>RPOC_NITOC (Q3J8Q8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1403

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 464  QELSQGEVALDGPPVPHGPARLLVLHDLRW 553
            + + +GE  +DGPPVPH   RL  + +L +
Sbjct: 1201 EHVEKGEAIVDGPPVPHDILRLRGVEELTY 1230

>CP314_DROME (Q9VUF8) Cytochrome P450 314a1, mitochondrial precursor (EC|
           1.14.99.22) (CYPCCCXIVA1) (Ecdysone 20-monooxygenase)
           (E20MO) (Shade protein)
          Length = 540

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 478 LAELLQWFADKGLTAYSISCGTSLLYNNMFARHKD 374
           LA +L+   D  L+ YS++ GT +L  NM A HKD
Sbjct: 414 LARILE--EDMELSGYSLNAGTVVLCQNMIACHKD 446

>IMDH_HAEIN (P44334) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 488

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = -3

Query: 499 SVKGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFARHKDRLTKKVIDIAKEVAKV 326
           +V  NLTLAEL +     G   Y +  G     NN+      R T+ V D++K V++V
Sbjct: 100 TVLPNLTLAELAEMVKKNGFAGYPVVDGE----NNLIGIITGRDTRFVKDLSKTVSQV 153

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = -3

Query: 529 ETSWTVWDRWSVKGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFARHKDRLTKKVID 350
           E+++TV  RW           ++W    G+  YS S G   +  N        +  K +D
Sbjct: 224 ESTFTVVSRW-----------VKWLLVFGILTYSFSEGFKYITENTTLLKSSEVADKSVD 272

Query: 349 IAKEVAKVD 323
           +AK   K D
Sbjct: 273 VAKTNVKFD 281


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,790,554
Number of Sequences: 219361
Number of extensions: 1271012
Number of successful extensions: 4714
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4707
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)