ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags14n24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 432 bits (218), Expect = e-118 Identities = 481/567 (84%), Gaps = 4/567 (0%) Strand = Plus / Minus Query: 81 aattacaagcttgtcgctgaagctgttacatgataatatccttgcaaacataaggaaccc 140 ||||||||||||||| || | ||||||||||||||||||||||||||||||| || | Sbjct: 1297 aattacaagcttgtcact-aggctgttacatgataatatccttgcaaacatagggcagtg 1239 Query: 141 cctttatttttctttatcggagcacaccatccatacataaacaaagcacactgcaagggt 200 |||||||||||||| | | |||| |||||||||||||||| ||||||||||| |||||| Sbjct: 1238 cctttatttttcttcagcaaagcaaaccatccatacataaataaagcacactgaaagggt 1179 Query: 201 ncttcagagtatcccttgttagataaacttttgagaaaggctttacttgtagacctcgat 260 || |||||| |||| ||||||||||| |||| || |||||||||||||||| Sbjct: 1178 actaaagagtacaacttg---gataaacttttatgaaaccgttcacttgtagacctcgat 1122 Query: 261 gacacctcgtgcacccattttcttgataattttgtagtcggtgaaccctgctttcatgaa 320 |||||||||||||||| |||||||| ||||||||||||| | |||||||||||| |||| Sbjct: 1121 aacacctcgtgcacccagtttcttgacaattttgtagtcgctaaaccctgctttcgtgaa 1062 Query: 321 gaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacacaagcatgagcat 380 ||| || |||||| |||||| || ||||||||||| |||||||||||||||||||| || Sbjct: 1061 gagctcatgccagttattttcacttcgttgacggcctctcgtgaacacaagcatgaggat 1002 Query: 381 gtccatgagagtctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatc 440 |||||| ||||| || ||| ||||||||| | || ||||| || ||||||| || || Sbjct: 1001 gtccatcagagtttgttccttaaacatgacttggcccaatgagggggcgaccacaatgtc 942 Query: 441 aatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttag 500 || ||||||||||| ||||||||||| || ||||||||||||| |||||| |||||||| Sbjct: 941 tattacaatcacctttcctccctcctcgcgtgaaggaatggcatccttacattgggttag 882 Query: 501 gatcttcacacaatcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcctg 560 |||||| | |||||| |||| |||| ||||||||| ||||||||||||||||| ||||| Sbjct: 881 gatcttaaaacaatcctcgtaactcaagtggtgcaaaacaagcttgagcatcaccgcctg 822 Query: 561 agcctttgggacagtgtggaacaggtcaccagcgacatagttgactacacagtcggatgg 620 |||||||||||| |||||||| ||||| || || | ||||||||||| || ||| || || Sbjct: 821 agcctttgggacggtgtggaagaggtcgccggcaaaatagttgactataccgtcagaagg 762 Query: 621 agttttttctatgaccttggggagatc 647 |||||| || || |||||||||||||| Sbjct: 761 agttttgtcgatcaccttggggagatc 735
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 115 bits (58), Expect = 2e-22 Identities = 172/210 (81%) Strand = Plus / Minus Query: 393 ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 452 |||||| |||||||| || ||||||| ||| ||| | |||| || || |||| || || Sbjct: 1007 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 948 Query: 453 cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 512 ||||||||||||||| || || |||||||| || | ||||| || | ||||||||| || Sbjct: 947 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 888 Query: 513 atcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcctgagcctttgggac 572 ||| || || ||||||||||||| |||||||||||||||||||| |||||| ||| || Sbjct: 887 atcatcatcgctccagtggtgcaatacaagcttgagcatcacggcttgagccggtggcac 828 Query: 573 agtgtggaacaggtcaccagcgacatagtt 602 |||||||||| |||||| || |||||||| Sbjct: 827 ggtgtggaacaagtcacctgcaacatagtt 798
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 115 bits (58), Expect = 2e-22 Identities = 172/210 (81%) Strand = Plus / Minus Query: 393 ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 452 |||||| |||||||| || ||||||| ||| ||| | |||| || || |||| || || Sbjct: 1012 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 953 Query: 453 cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 512 ||||||||||||||| || || |||||||| || | ||||| || | ||||||||| || Sbjct: 952 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 893 Query: 513 atcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcctgagcctttgggac 572 ||| || || ||||||||||||| |||||||||||||||||||| |||||| ||| || Sbjct: 892 atcatcatcgctccagtggtgcaatacaagcttgagcatcacggcttgagccggtggcac 833 Query: 573 agtgtggaacaggtcaccagcgacatagtt 602 |||||||||| |||||| || |||||||| Sbjct: 832 ggtgtggaacaagtcacctgcaacatagtt 803
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 111 bits (56), Expect = 3e-21 Identities = 238/296 (80%), Gaps = 2/296 (0%) Strand = Plus / Minus Query: 250 tagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcggtgaaccct 309 |||||||||| |||| |||| ||||| | |||||| | ||| || ||||| |||| ||| Sbjct: 64471 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 64412 Query: 310 gctttcatgaagaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacaca 369 ||| ||||||| ||||| |||| ||||||||| | |||||||| || || || ||| Sbjct: 64411 gctgtcatgaacaggtcatgccaatcattttcgttccgttgacgacctctagtattcacc 64352 Query: 370 agcatgagcatgtccatga-gagtctgggcctcaaacatgacaggtcctaatgatggttc 428 | ||||||||||||||| | ||| ||| || || ||||| ||||| || || |||||||| Sbjct: 64351 atcatgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttc 64293 Query: 429 gaccacgatatcaatgacaatcaccttccctccctcctcacgggaaggaatggcattctt 488 |||| |||||| |||||||||| |||||| ||||||| || |||||||| || || || Sbjct: 64292 aaccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagccttttt 64233 Query: 489 acactgggttaggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| | |||||||||||| || || ||||| ||| |||| ||||| ||||||| Sbjct: 64232 gcactgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 64177 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 393 ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 452 |||||| |||||||| || ||||||| ||| ||| | |||| || || |||| || || Sbjct: 123014 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 122955 Query: 453 cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 512 ||||||||||||||| || || |||||||| || | ||||| || | ||||||||| || Sbjct: 122954 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 122895 Query: 513 atcgtcgtcactccagtggtgcagcacaagct 544 ||| || || ||||||||||||| ||||||| Sbjct: 122894 atcatcatcgctccagtggtgcaatacaagct 122863 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 543 cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 602 ||||||||||||||| |||||| ||| || |||||||||| |||||| || |||||||| Sbjct: 119697 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 119638 Score = 40.1 bits (20), Expect = 8.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 472 gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 531 ||||||||||| ||||| || || | ||||| |||||||| ||||| || ||||||||| Sbjct: 128503 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 128562
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 111 bits (56), Expect = 3e-21 Identities = 238/296 (80%), Gaps = 2/296 (0%) Strand = Plus / Plus Query: 250 tagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcggtgaaccct 309 |||||||||| |||| |||| ||||| | |||||| | ||| || ||||| |||| ||| Sbjct: 11549317 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11549376 Query: 310 gctttcatgaagaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacaca 369 ||| ||||||| ||||| |||| ||||||||| | |||||||| || || || ||| Sbjct: 11549377 gctgtcatgaacaggtcatgccaatcattttcgttccgttgacgacctctagtattcacc 11549436 Query: 370 agcatgagcatgtccatga-gagtctgggcctcaaacatgacaggtcctaatgatggttc 428 | ||||||||||||||| | ||| ||| || || ||||| ||||| || || |||||||| Sbjct: 11549437 atcatgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttc 11549495 Query: 429 gaccacgatatcaatgacaatcaccttccctccctcctcacgggaaggaatggcattctt 488 |||| |||||| |||||||||| |||||| ||||||| || |||||||| || || || Sbjct: 11549496 aaccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagccttttt 11549555 Query: 489 acactgggttaggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| | |||||||||||| || || ||||| ||| |||| ||||| ||||||| Sbjct: 11549556 gcactgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 11549611 Score = 83.8 bits (42), Expect = 7e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 439 tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 498 ||||||| |||||||||||||| || | |||| ||||| || |||||||| || ||| Sbjct: 11329787 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 11329846 Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 || || ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 11329847 agtattttcacacaatcctcgtcactccagtggtgaagcacaagct 11329892 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 448 atcaccttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttc 507 |||||||||||||| || || |||| ||||| || ||||| || | | |||||||||| Sbjct: 11354087 atcaccttccctccatcttctcgggttggaatagctttcttgcaattagctaggatcttc 11354146 Query: 508 acacaatcgtcgtcactccagtggtgcagcacaagct 544 |||||||| |||||| |||||||||| |||||||||| Sbjct: 11354147 acacaatcctcgtcattccagtggtgaagcacaagct 11354183 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 442 atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 501 ||||| ||||||||||||||||||| || ||||| ||||| ||||| ||||||| ||| Sbjct: 7137724 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 7137783 Query: 502 atcttcacacaatcgtcgtcactcca 527 |||||||| || ||||| || ||||| Sbjct: 7137784 atcttcacgcagtcgtcatcgctcca 7137809 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 393 ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 452 |||||| |||||||| || ||||||| ||| ||| | |||| || || |||| || || Sbjct: 11490774 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 11490833 Query: 453 cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 512 ||||||||||||||| || || |||||||| || | ||||| || | ||||||||| || Sbjct: 11490834 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 11490893 Query: 513 atcgtcgtcactccagtggtgcagcacaagct 544 ||| || || ||||||||||||| ||||||| Sbjct: 11490894 atcatcatcgctccagtggtgcaatacaagct 11490925 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 543 cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 602 ||||||||||||||| |||||| ||| || |||||||||| |||||| || |||||||| Sbjct: 11494091 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 11494150 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 302 tgaaccctgctttcatgaagaggtctcgccagtcattttcg 342 |||| ||||||||| ||||||| || ||||||||||||||| Sbjct: 11329653 tgaagcctgctttcttgaagagatcacgccagtcattttcg 11329693 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 274 cccattttcttgataattttgtagtcggtgaaccctgctttcatgaagaggtctcgccag 333 |||| |||||| | ||| |||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 11294558 cccaatttcttcacaatcttgtagtccctgaagcctactttcatgaagagatctcgccaa 11294617 Query: 334 tcatt 338 ||||| Sbjct: 11294618 tcatt 11294622 Score = 40.1 bits (20), Expect = 8.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 472 gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 531 ||||||||||| ||||| || || | ||||| |||||||| ||||| || ||||||||| Sbjct: 11485285 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 11485226
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 111 bits (56), Expect = 3e-21 Identities = 238/296 (80%), Gaps = 2/296 (0%) Strand = Plus / Plus Query: 250 tagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcggtgaaccct 309 |||||||||| |||| |||| ||||| | |||||| | ||| || ||||| |||| ||| Sbjct: 11628506 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11628565 Query: 310 gctttcatgaagaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacaca 369 ||| ||||||| ||||| |||| ||||||||| | |||||||| || || || ||| Sbjct: 11628566 gctgtcatgaacaggtcatgccaatcattttcgttccgttgacgacctctagtattcacc 11628625 Query: 370 agcatgagcatgtccatga-gagtctgggcctcaaacatgacaggtcctaatgatggttc 428 | ||||||||||||||| | ||| ||| || || ||||| ||||| || || |||||||| Sbjct: 11628626 atcatgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttc 11628684 Query: 429 gaccacgatatcaatgacaatcaccttccctccctcctcacgggaaggaatggcattctt 488 |||| |||||| |||||||||| |||||| ||||||| || |||||||| || || || Sbjct: 11628685 aaccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagccttttt 11628744 Query: 489 acactgggttaggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| | |||||||||||| || || ||||| ||| |||| ||||| ||||||| Sbjct: 11628745 gcactgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 11628800 Score = 83.8 bits (42), Expect = 7e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 439 tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 498 ||||||| |||||||||||||| || | |||| ||||| || |||||||| || ||| Sbjct: 11408976 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 11409035 Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 || || ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 11409036 agtattttcacacaatcctcgtcactccagtggtgaagcacaagct 11409081 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 448 atcaccttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttc 507 |||||||||||||| || || |||| ||||| || ||||| || | | |||||||||| Sbjct: 11433276 atcaccttccctccatcttctcgggttggaatagctttcttgcaattagctaggatcttc 11433335 Query: 508 acacaatcgtcgtcactccagtggtgcagcacaagct 544 |||||||| |||||| |||||||||| |||||||||| Sbjct: 11433336 acacaatcctcgtcattccagtggtgaagcacaagct 11433372 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 442 atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 501 ||||| ||||||||||||||||||| || ||||| ||||| ||||| ||||||| ||| Sbjct: 7203695 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 7203754 Query: 502 atcttcacacaatcgtcgtcactcca 527 |||||||| || ||||| || ||||| Sbjct: 7203755 atcttcacgcagtcgtcatcgctcca 7203780 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 393 ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 452 |||||| |||||||| || ||||||| ||| ||| | |||| || || |||| || || Sbjct: 11569963 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 11570022 Query: 453 cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 512 ||||||||||||||| || || |||||||| || | ||||| || | ||||||||| || Sbjct: 11570023 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 11570082 Query: 513 atcgtcgtcactccagtggtgcagcacaagct 544 ||| || || ||||||||||||| ||||||| Sbjct: 11570083 atcatcatcgctccagtggtgcaatacaagct 11570114 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 543 cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 602 ||||||||||||||| |||||| ||| || |||||||||| |||||| || |||||||| Sbjct: 11573280 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 11573339 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 302 tgaaccctgctttcatgaagaggtctcgccagtcattttcg 342 |||| ||||||||| ||||||| || ||||||||||||||| Sbjct: 11408842 tgaagcctgctttcttgaagagatcacgccagtcattttcg 11408882 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 274 cccattttcttgataattttgtagtcggtgaaccctgctttcatgaagaggtctcgccag 333 |||| |||||| | ||| |||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 11373747 cccaatttcttcacaatcttgtagtccctgaagcctactttcatgaagagatctcgccaa 11373806 Query: 334 tcatt 338 ||||| Sbjct: 11373807 tcatt 11373811 Score = 40.1 bits (20), Expect = 8.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 472 gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 531 ||||||||||| ||||| || || | ||||| |||||||| ||||| || ||||||||| Sbjct: 11564474 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 11564415
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 439 tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 498 ||||||| |||||||||||||| || | |||| ||||| || |||||||| || ||| Sbjct: 978 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 919 Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagcttgagcat 551 || || ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 918 agtattttcacacaatcctcgtcactccagtggtgaagcacaagcttgagcat 866 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 302 tgaaccctgctttcatgaagaggtctcgccagtcattttcg 342 |||| ||||||||| ||||||| || ||||||||||||||| Sbjct: 1112 tgaagcctgctttcttgaagagatcacgccagtcattttcg 1072
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 83.8 bits (42), Expect = 7e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 439 tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 498 ||||||| |||||||||||||| || | |||| ||||| || |||||||| || ||| Sbjct: 116145 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 116204 Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 || || ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 116205 agtattttcacacaatcctcgtcactccagtggtgaagcacaagct 116250 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 448 atcaccttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttc 507 |||||||||||||| || || |||| ||||| || ||||| || | | |||||||||| Sbjct: 140445 atcaccttccctccatcttctcgggttggaatagctttcttgcaattagctaggatcttc 140504 Query: 508 acacaatcgtcgtcactccagtggtgcagcacaagct 544 |||||||| |||||| |||||||||| |||||||||| Sbjct: 140505 acacaatcctcgtcattccagtggtgaagcacaagct 140541 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 302 tgaaccctgctttcatgaagaggtctcgccagtcattttcg 342 |||| ||||||||| ||||||| || ||||||||||||||| Sbjct: 116011 tgaagcctgctttcttgaagagatcacgccagtcattttcg 116051 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 274 cccattttcttgataattttgtagtcggtgaaccctgctttcatgaagaggtctcgccag 333 |||| |||||| | ||| |||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 80916 cccaatttcttcacaatcttgtagtccctgaagcctactttcatgaagagatctcgccaa 80975 Query: 334 tcatt 338 ||||| Sbjct: 80976 tcatt 80980
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 83.8 bits (42), Expect = 7e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 469 cgggaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccag 528 |||||||| ||||| ||||| || || | |||||||| | ||||| ||||| |||||| Sbjct: 289 cgggaaggtatggccttcttgcattgagcgaggatcttgatgcaatcctcgtcgctccag 230 Query: 529 tggtgcagcacaagcttgagcatcacggcctgagcctttgggacagtgtggaacaggtca 588 ||| || |||||||||||||| ||||||||||| |||||| || ||||| |||||| Sbjct: 229 aagtgtagaacaagcttgagcatgacggcctgagctggtgggacggtatggaagaggtca 170 Query: 589 ccagcgacatagtt 602 |||||||||||||| Sbjct: 169 ccagcgacatagtt 156 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tagacctcgatgacacctcg 269 |||||||||||||||||||| Sbjct: 505 tagacctcgatgacacctcg 486
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 442 atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 501 ||||| ||||||||||||||||||| || ||||| ||||| ||||| ||||||| ||| Sbjct: 44831 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 44772 Query: 502 atcttcacacaatcgtcgtcactcca 527 |||||||| || ||||| || ||||| Sbjct: 44771 atcttcacgcagtcgtcatcgctcca 44746
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 442 atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 501 ||||| ||||||||||||||||||| || ||||| ||||| ||||| ||||||| ||| Sbjct: 50944 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 51003 Query: 502 atcttcacacaatcgtcgtcactcca 527 |||||||| || ||||| || ||||| Sbjct: 51004 atcttcacgcagtcgtcatcgctcca 51029
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 393 ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 452 |||||| |||||||| || ||||||| ||| ||| | |||| || || |||| || || Sbjct: 8763 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 8704 Query: 453 cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 512 ||||||||||||||| || || |||||||| || | ||||| || | ||||||||| || Sbjct: 8703 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 8644 Query: 513 atcgtcgtcactccagtggtgcagcacaagct 544 ||| || || ||||||||||||| ||||||| Sbjct: 8643 atcatcatcgctccagtggtgcaatacaagct 8612 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 543 cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 602 ||||||||||||||| |||||| ||| || |||||||||| |||||| || |||||||| Sbjct: 5446 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 5387 Score = 40.1 bits (20), Expect = 8.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 472 gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 531 ||||||||||| ||||| || || | ||||| |||||||| ||||| || ||||||||| Sbjct: 14252 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 14311
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 249 gtagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcgg 301 |||||||||||||||||| || || || |||||||||| || |||||||||| Sbjct: 1103 gtagacctcgatgacaccacgagctccgattttcttgacaaccttgtagtcgg 1051 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcc 558 |||||||| || || |||||||| |||||| |||||| || ||||||||||| || ||| Sbjct: 853 aggatcttgacgcagtcgtcgtcgctccagaagtgcaggacgagcttgagcatgacagcc 794 Query: 559 tg 560 || Sbjct: 793 tg 792
>emb|BX009572.1|CNS08FJS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15CA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 535 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 21 tacatacacaaacaaacttattgt 44 |||||||||||||||||||||||| Sbjct: 234 tacatacacaaacaaacttattgt 257
>ref|XM_320984.2| Anopheles gambiae str. PEST ENSANGP00000019928 (ENSANGG00000017439), partial mRNA Length = 1872 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 21 tacatacacaaacaaacttattgt 44 |||||||||||||||||||||||| Sbjct: 1627 tacatacacaaacaaacttattgt 1604
>gb|DQ428476.1| Sorghum propinquum locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428475.1| Sorghum bicolor voucher PI585454 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428474.1| Sorghum bicolor voucher PI267539 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428473.1| Sorghum bicolor voucher PI267408 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428472.1| Sorghum bicolor voucher PI221607 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428471.1| Sorghum bicolor voucher PI152702 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428470.1| Sorghum bicolor voucher NSL92371 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428469.1| Sorghum bicolor voucher NSL87902b locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428468.1| Sorghum bicolor voucher NSL87902a locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428467.1| Sorghum bicolor voucher NSL87666 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428466.1| Sorghum bicolor voucher NSL77217 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428465.1| Sorghum bicolor voucher NSL77034 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428464.1| Sorghum bicolor voucher NSL56174 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428463.1| Sorghum bicolor voucher NSL56003 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428462.1| Sorghum bicolor voucher NSL55243 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428461.1| Sorghum bicolor voucher NSL51365 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428460.1| Sorghum bicolor voucher NSL51030b locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428459.1| Sorghum bicolor voucher NSL51030a locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>gb|DQ428458.1| Sorghum bicolor voucher NSL50875 locus PRC1113 genomic sequence Length = 666 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 499 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 544 ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
>ref|XM_670200.1| Plasmodium berghei strain ANKA hypothetical protein (PB104271.00.0) partial mRNA Length = 2088 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccattttcttgataattttgt 295 ||||||||||||||||||||| Sbjct: 1345 ccattttcttgataattttgt 1325
>gb|U58757.2| Caenorhabditis elegans cosmid C01B10, complete sequence Length = 45931 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aatatacatacacaaacaaac 37 ||||||||||||||||||||| Sbjct: 32091 aatatacatacacaaacaaac 32111
>gb|AC094963.9| Rattus norvegicus X BAC CH230-6L20 (Children's Hospital Oakland Research Institute) complete sequence Length = 213440 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cattttcttgataattttgta 296 ||||||||||||||||||||| Sbjct: 76825 cattttcttgataattttgta 76805
>gb|AC015795.20| Homo sapiens chromosome 17, clone RP11-613C6, complete sequence Length = 170862 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 621 agttttttctatgaccttggggagatcag 649 |||||||||||||||||||| || ||||| Sbjct: 89593 agttttttctatgaccttggagaaatcag 89565
>emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in linkage group 5, complete sequence Length = 191453 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 caaacaaacttattgtttaatactt 53 |||||||||| |||||||||||||| Sbjct: 61194 caaacaaactaattgtttaatactt 61218
>gb|AC102231.12| Mus musculus chromosome 18, clone RP24-76A21, complete sequence Length = 174136 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aatatacatacacaaacaaa 36 |||||||||||||||||||| Sbjct: 30034 aatatacatacacaaacaaa 30053
>ref|NM_006251.5| Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit (PRKAA1), transcript variant 1, mRNA Length = 5085 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 3042 atatacatacacaaacaaac 3023
>ref|NM_206907.3| Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit (PRKAA1), transcript variant 2, mRNA Length = 5130 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 3087 atatacatacacaaacaaac 3068
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acaggtcctaatgatggttc 428 |||||||||||||||||||| Sbjct: 859378 acaggtcctaatgatggttc 859359
>gb|AC121296.7| Mus musculus chromosome 14, clone RP23-286K8, complete sequence Length = 232049 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 97235 atatacatacacaaacaaac 97216
>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete sequence Length = 204339 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 137990 atatacatacacaaacaaac 137971
>gb|AC133076.3| Mus musculus BAC clone RP24-400C14 from chromosome 15, complete sequence Length = 200588 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 150140 atatacatacacaaacaaac 150159
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaacttat 41 ||||||||||||||||| |||||| Sbjct: 96632 atatacatacacaaacatacttat 96609
>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6, complete sequence Length = 198346 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 10428 atatacatacacaaacaaac 10409
>emb|CR382363.14| Zebrafish DNA sequence from clone DKEY-23P11 in linkage group 25, complete sequence Length = 129281 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 65610 atacatacacaaacaaactt 65591
>emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, complete sequence Length = 179411 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 57753 atatacatacacaaacaaac 57734
>gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, complete sequence Length = 204453 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 15820 atatacatacacaaacaaac 15839
>gb|AC107765.9| Mus musculus chromosome 17, clone RP23-166P7, complete sequence Length = 229687 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 106285 atatacatacacaaacaaac 106304
>gb|AY351354.1| Chasmistes brevirostris anonymous nuclear locus 083 marker sequence Length = 513 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaacttat 41 ||||||||||||| |||||||||| Sbjct: 36 atatacatacacacacaaacttat 59
>emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in linkage group 9, complete sequence Length = 214040 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 86203 atacatacacaaacaaactt 86222
>emb|CR293532.12| Zebrafish DNA sequence from clone DKEY-40N15 in linkage group 23, complete sequence Length = 146597 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 60331 atatacatacacaaacaaac 60350
>emb|AL592293.7| Human DNA sequence from clone RP11-54D18 on chromosome 9 Contains a lactate dehdrogenase A (LDHA) (LOC158222) pseudogene, a novel pseudogene (FLJ20543), a pseudogene similar to part of chloride channel 3 (CLCN3) (CLC3), a pseudogene similar to part of PC4 and SFRS1 interacting protein 2 (PSIP2) and a CpG island, complete sequence Length = 157574 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 19057 atacatacacaaacaaactt 19076
>gb|AC091397.2| Rattus norvegicus strain Brown Norway clone RP31-246E3, complete sequence Length = 73920 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 tttctatgaccttggggaga 645 |||||||||||||||||||| Sbjct: 28070 tttctatgaccttggggaga 28089
>emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chromosome 13q12.3-14.11 Contains a ribosomal protein S12 (RPS12) pseudogene and a CpG island, complete sequence Length = 182178 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cattttcttgataattttgt 295 |||||||||||||||||||| Sbjct: 120367 cattttcttgataattttgt 120386
>emb|CR318589.8| Zebrafish DNA sequence from clone DKEYP-107F9 in linkage group 14, complete sequence Length = 97627 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 21908 atatacatacacaaacaaac 21889
>gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, complete sequence Length = 157325 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 82344 atatacatacacaaacaaac 82325
>emb|BX511111.16| Zebrafish DNA sequence from clone RP71-62I8 in linkage group 17, complete sequence Length = 123253 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 120368 atacatacacaaacaaactt 120387
>emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in linkage group 1, complete sequence Length = 178445 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 49000 atacatacacaaacaaactt 49019
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 1068586 atatacatacacaaacaaac 1068567
>emb|AL831789.6| Zebrafish DNA sequence from clone CH211-207O21 in linkage group 14 Contains the zebrafish fgf24 gene for fibroblast growth factor 24, a novel gene for a RING finger protein, the lbx1h gene for lady bird-like homeobox 1 homolog, (Drosophila) and eight CpG islands, complete sequence Length = 217649 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacaaacttattgttta 47 |||||||||||||||||||| Sbjct: 209418 acaaacaaacttattgttta 209437
>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence Length = 211004 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 10427 atatacatacacaaacaaac 10446
>emb|CR933001.12| Zebrafish DNA sequence from clone DKEY-158B11 in linkage group 5, complete sequence Length = 158802 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cattttcttgataattttgt 295 |||||||||||||||||||| Sbjct: 91007 cattttcttgataattttgt 90988
>emb|AL645582.22| Mouse DNA sequence from clone RP23-302J15 on chromosome 11 Contains two CpG islands, complete sequence Length = 135978 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 32880 atatacatacacaaacaaac 32861
>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4, complete sequence Length = 92591 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 64543 atatacatacacaaacaaac 64524 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 11136 atatacatacacaaacaaac 11117
>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8, complete sequence Length = 174723 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 7817 atatacatacacaaacaaac 7798
>emb|CR847792.4| Zebrafish DNA sequence from clone DKEY-22A20 in linkage group 3, complete sequence Length = 106088 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 38311 atacatacacaaacaaactt 38292
>emb|BX950171.9| Zebrafish DNA sequence from clone DKEY-1D1 in linkage group 5, complete sequence Length = 120091 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 53729 atacatacacaaacaaactt 53748
>emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in linkage group 11, complete sequence Length = 84892 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 75548 atacatacacaaacaaactt 75567
>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15, complete sequence Length = 224041 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 213325 atatacatacacaaacaaac 213306 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 202488 atatacatacacaaacaaac 202469
>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8, complete sequence Length = 198019 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 98297 atatacatacacaaacaaac 98316 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 61308 atatacatacacaaacaaac 61289
>emb|BX571711.8| Zebrafish DNA sequence from clone DKEY-57L19 in linkage group 21, complete sequence Length = 193674 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 1622 atatacatacacaaacaaac 1641
>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence Length = 223438 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aatatacatacacaaacaaa 36 |||||||||||||||||||| Sbjct: 79020 aatatacatacacaaacaaa 79001
>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence Length = 163201 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaacttattgtttaatactt 53 |||||||||||||||||||| Sbjct: 35694 aaacttattgtttaatactt 35713
>gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187657 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ttagataaacttttgagaaa 238 |||||||||||||||||||| Sbjct: 100340 ttagataaacttttgagaaa 100321
>gb|AC027322.4| Homo sapiens chromosome 5 clone CTD-2027G10, complete sequence Length = 156248 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tacatacacaaacaaactta 40 |||||||||||||||||||| Sbjct: 8992 tacatacacaaacaaactta 8973
>emb|BX248091.12| Zebrafish DNA sequence from clone DKEY-257I9, complete sequence Length = 165075 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 89946 atacatacacaaacaaactt 89965 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 87206 atacatacacaaacaaactt 87225
>emb|BX649506.13| Zebrafish DNA sequence from clone DKEY-43L23 in linkage group 22, complete sequence Length = 110752 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 6444 atatacatacacaaacaaac 6463
>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17, complete sequence Length = 247607 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 167248 atatacatacacaaacaaac 167229 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 26257 atatacatacacaaacaaac 26276
>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 131425 atatacatacacaaacaaac 131444
>emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 in linkage group 23, complete sequence Length = 189019 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 39942 atatacatacacaaacaaac 39961
>emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in linkage group 7, complete sequence Length = 159633 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 74501 atatacatacacaaacaaac 74482
>gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosome 15, complete sequence Length = 217298 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 ctatgaccttggggagatca 648 |||||||||||||||||||| Sbjct: 100374 ctatgaccttggggagatca 100355
>gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y, complete sequence Length = 156357 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ataaacaaagcacactgcaa 196 |||||||||||||||||||| Sbjct: 116672 ataaacaaagcacactgcaa 116691
>emb|BX294113.7| Zebrafish DNA sequence from clone DKEYP-73G8 in linkage group 24, complete sequence Length = 199820 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 acacaagcatgagcatgtccatga 388 |||||||||| ||||||||||||| Sbjct: 68031 acacaagcattagcatgtccatga 68008
>gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y, complete sequence Length = 174082 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ataaacaaagcacactgcaa 196 |||||||||||||||||||| Sbjct: 21693 ataaacaaagcacactgcaa 21674
>gb|AC012315.5|AC012315 Homo sapiens chromosome 5 clone CTD-2122K7, complete sequence Length = 170216 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tacatacacaaacaaactta 40 |||||||||||||||||||| Sbjct: 164974 tacatacacaaacaaactta 164955
>emb|BX530067.4| Zebrafish DNA sequence from clone DKEY-194C21 in linkage group 19, complete sequence Length = 203882 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 194603 atacatacacaaacaaactt 194622
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 146647 atatacatacacaaacaaac 146628
>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22, complete sequence Length = 165445 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 158661 atatacatacacaaacaaac 158642
>emb|BX649620.5| Zebrafish DNA sequence from clone DKEY-11N14 in linkage group 20, complete sequence Length = 61794 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 61416 atatacatacacaaacaaac 61435
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 109436 atatacatacacaaacaaac 109455
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 40.1 bits (20), Expect = 8.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 472 gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 531 ||||||||||| ||||| || || | ||||| |||||||| ||||| || ||||||||| Sbjct: 965 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 906
>dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB22 Length = 29694 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 620 gagttttttctatgaccttgggga 643 ||||||||||||| |||||||||| Sbjct: 26081 gagttttttctataaccttgggga 26058
>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y Length = 1351786 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ataaacaaagcacactgcaa 196 |||||||||||||||||||| Sbjct: 1174694 ataaacaaagcacactgcaa 1174675 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ataaacaaagcacactgcaa 196 |||||||||||||||||||| Sbjct: 1113516 ataaacaaagcacactgcaa 1113535
>gb|AC149314.2| Phakopsora pachyrhizi clone JGIAFNA-101K12, complete sequence Length = 35483 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 365 acacaagcatgagcatgtccatgagagt 392 |||||| ||||||||||| ||||||||| Sbjct: 12685 acacaatcatgagcatgtgcatgagagt 12658
>emb|CR388193.14| Zebrafish DNA sequence from clone DKEY-81L19 in linkage group 14, complete sequence Length = 11952 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 3659 atatacatacacaaacaaac 3678
>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19, complete sequence Length = 180950 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 61167 atacatacacaaacaaactt 61186
>emb|BX842593.8| Zebrafish DNA sequence from clone DKEY-19K8 in linkage group 20, complete sequence Length = 127151 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 36398 atatacatacacaaacaaac 36417
>emb|AL591510.11| Zebrafish DNA sequence from clone BUSM1-228E24 in linkage group 6, complete sequence Length = 99579 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 80281 atacatacacaaacaaactt 80300
>emb|CR854848.7| Zebrafish DNA sequence from clone DKEY-287E13 in linkage group 15, complete sequence Length = 31765 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 22085 atacatacacaaacaaactt 22104
>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14, complete sequence Length = 142230 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 99941 atatacatacacaaacaaac 99922
>emb|BX950199.14| Zebrafish DNA sequence from clone CH211-215A11 in linkage group 24, complete sequence Length = 213091 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 acacaagcatgagcatgtccatga 388 |||||||||| ||||||||||||| Sbjct: 207721 acacaagcattagcatgtccatga 207744
>emb|CR759951.21| Zebrafish DNA sequence from clone DKEY-256E7 in linkage group 1, complete sequence Length = 120721 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 6970 atacatacacaaacaaactt 6989
>gb|AF060868.1|AF060868 Mus musculus tumor susceptibility protein 101 (tsg101) gene, complete cds Length = 33613 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aatatacatacacaaacaaa 36 |||||||||||||||||||| Sbjct: 24246 aatatacatacacaaacaaa 24227
>emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 in linkage group 9, complete sequence Length = 193489 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 158083 atacatacacaaacaaactt 158064
>emb|CR388097.9| Zebrafish DNA sequence from clone CH211-10J9 in linkage group 3, complete sequence Length = 195927 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 75726 atacatacacaaacaaactt 75745
>emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, complete sequence Length = 197027 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 91097 atatacatacacaaacaaac 91078
>gb|BC037303.2| Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit, transcript variant 1, mRNA (cDNA clone MGC:33776 IMAGE:5265054), complete cds Length = 5083 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 3024 atatacatacacaaacaaac 3005
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence Length = 214005 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tacataaacaaagcacactg 193 |||||||||||||||||||| Sbjct: 31022 tacataaacaaagcacactg 31003
>emb|AL929568.12| Zebrafish DNA sequence from clone CH211-59K8, complete sequence Length = 185257 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 163971 atacatacacaaacaaactt 163990
>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14, complete sequence Length = 193551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atatacatacacaaacaaac 37 |||||||||||||||||||| Sbjct: 88599 atatacatacacaaacaaac 88618
>dbj|AP006662.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10F06, TM0347b, complete sequence Length = 71349 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aatatacatacacaaacaaa 36 |||||||||||||||||||| Sbjct: 46995 aatatacatacacaaacaaa 46976
>dbj|AP006401.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT18E13, TM0283, complete sequence Length = 112721 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tgagaaaggctttacttgta 251 |||||||||||||||||||| Sbjct: 91431 tgagaaaggctttacttgta 91412
>gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosome 15, complete sequence Length = 213726 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 ctatgaccttggggagatca 648 |||||||||||||||||||| Sbjct: 2415 ctatgaccttggggagatca 2396
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacatacacaaacaaactt 39 |||||||||||||||||||| Sbjct: 111845 atacatacacaaacaaactt 111864 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,787,675 Number of Sequences: 3902068 Number of extensions: 6787675 Number of successful extensions: 142620 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 142161 Number of HSP's gapped (non-prelim): 451 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
