ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15c16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds 803 0.0
2dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 9e-74
3gb|AY104742.1| Zea mays PCO152525 mRNA sequence 276 8e-71
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
5dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
6dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
7dbj|AK104196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
8dbj|AK072628.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
9dbj|AK059921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12ref|NM_191117.1| Oryza sativa (japonica cultivar-group), predic... 44 0.54
13gb|AC012569.18| Homo sapiens chromosome , clone RP11-8H2, comple... 44 0.54
14dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
15dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
16dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
17gb|AY112460.1| Zea mays CL9078_1 mRNA sequence 44 0.54
18dbj|D28126.1|HUMATPSAS Human gene for ATP synthase alpha subunit... 44 0.54
19emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 i... 42 2.1
20gb|AC003685.1|AC003685 Homo sapiens Xp22 BAC GS-542M4 (Genome Sy... 42 2.1
21gb|AY775058.1| Homo sapiens misshapen/NIKs-related kinase isofor... 40 8.4
22gb|BC056810.1| Danio rerio zgc:63733, mRNA (cDNA clone MGC:63733... 40 8.4
23ref|NM_001024937.1| Homo sapiens misshapen-like kinase 1 (zebraf... 40 8.4
24ref|NM_015716.2| Homo sapiens misshapen-like kinase 1 (zebrafish... 40 8.4
25ref|NM_170663.2| Homo sapiens misshapen-like kinase 1 (zebrafish... 40 8.4
26ref|NM_153827.2| Homo sapiens misshapen-like kinase 1 (zebrafish... 40 8.4
27emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in... 40 8.4
28gb|AC002287.1|HUAC002287 Homo sapiens Chromosome 16 BAC clone CI... 40 8.4
29gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosom... 40 8.4
30gb|AC142330.1| Pan troglodytes BAC clone RP43-25K18 from 7, comp... 40 8.4
31gb|AF509739.1| Loofa yellow mosaic virus DNA-A, complete sequence 40 8.4
32gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, compl... 40 8.4
33emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 8.4
34gb|BC034673.1| Homo sapiens misshapen-like kinase 1 (zebrafish),... 40 8.4
35ref|NM_200619.1| Danio rerio zgc:63733 (zgc:63733), mRNA 40 8.4
36gb|AC020633.3| Homo sapiens 3 BAC RP11-65E22 (Roswell Park Cance... 40 8.4
37gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, c... 40 8.4
38gb|AY045719.1| Larus argentatus vitellogenin mRNA, complete cds 40 8.4
39ref|XM_697217.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 8.4
40gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, comp... 40 8.4
41gb|AF320615.1|AF320615 Mus musculus Tnf receptor-associated fact... 40 8.4
42gb|AC130450.3| Homo sapiens chromosome 16 clone CTA-237H1, compl... 40 8.4
43gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I... 40 8.4
44gb|AF288092.1| Naegleria gruberi mitochondrial DNA, complete genome 40 8.4
45gb|BC094686.1| Homo sapiens cDNA clone IMAGE:30389401, containin... 40 8.4
46gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, compl... 40 8.4
47gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, c... 40 8.4
48emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 ... 40 8.4
49emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in ... 40 8.4
50gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, co... 40 8.4
51dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 8.4
52dbj|AP006246.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 8.4
53gb|DQ294276.1| Solanum tuberosum clone 171G04 putative 24 kDa se... 40 8.4
54gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, compl... 40 8.4
55gb|AC002497.1|AC002497 Human Cosmid g1940a142 from 7q31.3, compl... 40 8.4
56dbj|AB209450.1| Homo sapiens mRNA for misshapen/NIK-related kina... 40 8.4
57dbj|AB035698.1| Homo sapiens mRNA for Misshapen/NIK-related kina... 40 8.4
58dbj|AB041926.1| Homo sapiens mRNA for GCK family kinase MINK-2, ... 40 8.4
59dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 8.4 
>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds
          Length = 615

 Score =  803 bits (405), Expect = 0.0
 Identities = 405/405 (100%)
 Strand = Plus / Minus

                                                                       
Query: 216 ctaggtcttcttggttttcgccggtcctcgcggtatcttgctcaaaaccttctggtccag 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctaggtcttcttggttttcgccggtcctcgcggtatcttgctcaaaaccttctggtccag 556

                                                                       
Query: 276 cacctcgtagtgcttgcacgcctcggtatgagcctttccggcgaagtgatccaccttgtc 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cacctcgtagtgcttgcacgcctcggtatgagcctttccggcgaagtgatccaccttgtc 496

                                                                       
Query: 336 ctggtacttatcgtacaagatcggcaccgtgtggatcatcaggacagcgatgtatatcaa 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctggtacttatcgtacaagatcggcaccgtgtggatcatcaggacagcgatgtatatcaa 436

                                                                       
Query: 396 ggtgaggaaatcacagcagcttccgacttctgacagaacccagagaccagcaatcacacc 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggtgaggaaatcacagcagcttccgacttctgacagaacccagagaccagcaatcacacc 376

                                                                       
Query: 456 aaggaatttcttcagatcatgccccattgcgatctcccggaacaagtgaagtgatctgtt 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaggaatttcttcagatcatgccccattgcgatctcccggaacaagtgaagtgatctgtt 316

                                                                       
Query: 516 gacgtcgttgcgtaatgcccgtgatacattcacagcgaggtcttcaggtatctcaactac 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gacgtcgttgcgtaatgcccgtgatacattcacagcgaggtcttcaggtatctcaactac 256

                                                        
Query: 576 aggaatatccggtgggctcttcttgatgaaggtcatagctttgga 620
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aggaatatccggtgggctcttcttgatgaaggtcatagctttgga 211
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>dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051P18, full
           insert sequence
          Length = 1147

 Score =  285 bits (144), Expect = 9e-74
 Identities = 303/356 (85%)
 Strand = Plus / Minus

                                                                       
Query: 247 ggtatcttgctcaaaaccttctggtccagcacctcgtagtgcttgcacgcctcggtatga 306
           ||||||||||||||||||||    ||||||||||| ||||||||||| ||||| |  |||
Sbjct: 824 ggtatcttgctcaaaaccttggcatccagcacctcatagtgcttgcaggcctcagagtga 765

                                                                       
Query: 307 gcctttccggcgaagtgatccaccttgtcctggtacttatcgtacaagatcggcaccgtg 366
           ||| |||| || ||||| || ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 764 gcccttccagcaaagtggtcgaccttatcctggtacttgtcatacaagatcggcaccgtg 705

                                                                       
Query: 367 tggatcatcaggacagcgatgtatatcaaggtgaggaaatcacagcagcttccgacttct 426
           |||| ||||||||| || |  ||||||||||||||||| || ||||||||||| ||||||
Sbjct: 704 tggagcatcaggacggcaacatatatcaaggtgaggaagtcgcagcagcttcctacttct 645

                                                                       
Query: 427 gacagaacccagagaccagcaatcacaccaaggaatttcttcagatcatgccccattgcg 486
           || |||||||||||| || ||||||| || || || ||||| || ||||||||||  |||
Sbjct: 644 gagagaacccagagagcaacaatcacgcccagaaacttctttaggtcatgccccaacgcg 585

                                                                       
Query: 487 atctcccggaacaagtgaagtgatctgttgacgtcgttgcgtaatgcccgtgatacattc 546
           |||||||| |||| |||||||| |||||| | |||  |||||||||| ||||| || |||
Sbjct: 584 atctcccgaaacaggtgaagtgctctgtttatgtcactgcgtaatgctcgtgacacgttc 525

                                                                   
Query: 547 acagcgaggtcttcaggtatctcaactacaggaatatccggtgggctcttcttgat 602
           || ||||  |||||||||||||  |||||||||||||| ||||| |||||||||||
Sbjct: 524 acggcgacatcttcaggtatctgtactacaggaatatctggtggactcttcttgat 469
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>gb|AY104742.1| Zea mays PCO152525 mRNA sequence
          Length = 1163

 Score =  276 bits (139), Expect = 8e-71
 Identities = 286/335 (85%)
 Strand = Plus / Minus

                                                                       
Query: 271 tccagcacctcgtagtgcttgcacgcctcggtatgagcctttccggcgaagtgatccacc 330
           |||||||||| ||| ||||||   |||||||| || ||| |||| ||||  || ||||||
Sbjct: 807 tccagcaccttgtactgcttgagggcctcggtgtgtgcccttccagcgacatggtccacc 748

                                                                       
Query: 331 ttgtcctggtacttatcgtacaagatcggcaccgtgtggatcatcaggacagcgatgtat 390
           |||||||||||||| ||||||||||| ||||||||||||| ||||||||| || ||||||
Sbjct: 747 ttgtcctggtacttgtcgtacaagattggcaccgtgtggagcatcaggacggcaatgtat 688

                                                                       
Query: 391 atcaaggtgaggaaatcacagcagcttccgacttctgacagaacccagagaccagcaatc 450
            |||| |||||||| ||||||| |||||| ||| | || |||||||| |||||  | |||
Sbjct: 687 gtcaacgtgaggaagtcacagctgcttccaactccggagagaacccacagacccacgatc 628

                                                                       
Query: 451 acaccaaggaatttcttcagatcatgccccattgcgatctcccggaacaagtgaagtgat 510
           ||||| |  || ||||||||||||||||||||||||||||| |||||||||||||| | |
Sbjct: 627 acacccaaaaacttcttcagatcatgccccattgcgatctcacggaacaagtgaagcgct 568

                                                                       
Query: 511 ctgttgacgtcgttgcgtaatgcccgtgatacattcacagcgaggtcttcaggtatctca 570
           ||||||| ||| || |||||||||||||| ||||||||| | ||||| |||| || ||  
Sbjct: 567 ctgttgatgtcattccgtaatgcccgtgaaacattcacaacaaggtcctcagatacctgc 508

                                              
Query: 571 actacaggaatatccggtgggctcttcttgatgaa 605
           ||||| |||||||||||||| ||||||||||||||
Sbjct: 507 actactggaatatccggtggactcttcttgatgaa 473
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                            
Query: 247      ggtatcttgctcaaaaccttctggtccagcacctcgtagtgcttgcacgcctcggtatga 306
                ||||||||||||||||||||    ||||||||||| ||||||||||| ||||| |  |||
Sbjct: 17622297 ggtatcttgctcaaaaccttggcatccagcacctcatagtgcttgcaggcctcagagtga 17622238

                                                                            
Query: 307      gcctttccggcgaagtgatccaccttgtcctggtacttatcgtacaagatcggcaccgtg 366
                ||| |||| || ||||| || ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 17622237 gcccttccagcaaagtggtcgaccttatcctggtacttgtcatacaagatcggcaccgtg 17622178

                              
Query: 367      tggatcatcaggac 380
                |||| |||||||||
Sbjct: 17622177 tggagcatcaggac 17622164



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                            
Query: 463      ttcttcagatcatgccccattgcgatctcccggaacaagtgaagtgatctgttgacgtcg 522
                ||||| || ||||||||||  ||||||||||| |||| |||||||| |||||| | ||| 
Sbjct: 17621896 ttctttaggtcatgccccaacgcgatctcccgaaacaggtgaagtgctctgtttatgtca 17621837

                                                                            
Query: 523      ttgcgtaatgcccgtgatacattcacagcgaggtcttcaggtatctcaactacaggaata 582
                 |||||||||| ||||| || ||||| ||||  |||||||||||||  ||||||||||||
Sbjct: 17621836 ctgcgtaatgctcgtgacacgttcacggcgacatcttcaggtatctgtactacaggaata 17621777

                        
Query: 583      tccggtgg 590
                || |||||
Sbjct: 17621776 tctggtgg 17621769



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 388      tatatcaaggtgaggaaatcacagcagcttccgacttctgacagaacccagagaccagca 447
                ||||||||||||||||| || ||||||||||| |||||||| |||||||||||| || ||
Sbjct: 17622066 tatatcaaggtgaggaagtcgcagcagcttcctacttctgagagaacccagagagcaaca 17622007

                     
Query: 448      atcac 452
                |||||
Sbjct: 17622006 atcac 17622002
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>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           BAC clone:OJ1288_C01
          Length = 111223

 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                       
Query: 247 ggtatcttgctcaaaaccttctggtccagcacctcgtagtgcttgcacgcctcggtatga 306
           ||||||||||||||||||||    ||||||||||| ||||||||||| ||||| |  |||
Sbjct: 195 ggtatcttgctcaaaaccttggcatccagcacctcatagtgcttgcaggcctcagagtga 136

                                                                       
Query: 307 gcctttccggcgaagtgatccaccttgtcctggtacttatcgtacaagatcggcaccgtg 366
           ||| |||| || ||||| || ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 135 gcccttccagcaaagtggtcgaccttatcctggtacttgtcatacaagatcggcaccgtg 76

                         
Query: 367 tggatcatcaggac 380
           |||| |||||||||
Sbjct: 75  tggagcatcaggac 62
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>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0564B04
          Length = 64684

 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                         
Query: 247   ggtatcttgctcaaaaccttctggtccagcacctcgtagtgcttgcacgcctcggtatga 306
             ||||||||||||||||||||    ||||||||||| ||||||||||| ||||| |  |||
Sbjct: 48645 ggtatcttgctcaaaaccttggcatccagcacctcatagtgcttgcaggcctcagagtga 48586

                                                                         
Query: 307   gcctttccggcgaagtgatccaccttgtcctggtacttatcgtacaagatcggcaccgtg 366
             ||| |||| || ||||| || ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 48585 gcccttccagcaaagtggtcgaccttatcctggtacttgtcatacaagatcggcaccgtg 48526

                           
Query: 367   tggatcatcaggac 380
             |||| |||||||||
Sbjct: 48525 tggagcatcaggac 48512



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                         
Query: 463   ttcttcagatcatgccccattgcgatctcccggaacaagtgaagtgatctgttgacgtcg 522
             ||||| || ||||||||||  ||||||||||| |||| |||||||| |||||| | ||| 
Sbjct: 48244 ttctttaggtcatgccccaacgcgatctcccgaaacaggtgaagtgctctgtttatgtca 48185

                                                                         
Query: 523   ttgcgtaatgcccgtgatacattcacagcgaggtcttcaggtatctcaactacaggaata 582
              |||||||||| ||||| || ||||| ||||  |||||||||||||  ||||||||||||
Sbjct: 48184 ctgcgtaatgctcgtgacacgttcacggcgacatcttcaggtatctgtactacaggaata 48125

                     
Query: 583   tccggtgg 590
             || |||||
Sbjct: 48124 tctggtgg 48117



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 388   tatatcaaggtgaggaaatcacagcagcttccgacttctgacagaacccagagaccagca 447
             ||||||||||||||||| || ||||||||||| |||||||| |||||||||||| || ||
Sbjct: 48414 tatatcaaggtgaggaagtcgcagcagcttcctacttctgagagaacccagagagcaaca 48355

                  
Query: 448   atcac 452
             |||||
Sbjct: 48354 atcac 48350
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>dbj|AK104196.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H05, full
           insert sequence
          Length = 993

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 224/285 (78%)
 Strand = Plus / Minus

                                                                       
Query: 322 tgatccaccttgtcctggtacttatcgtacaagatcggcaccgtgtggatcatcaggaca 381
           ||||| ||||||||||| ||||| |  |||||||||||||| || |||| ||||| ||||
Sbjct: 643 tgatcaaccttgtcctgatacttgtgatacaagatcggcactgtatggagcatcaagaca 584

                                                                       
Query: 382 gcgatgtatatcaaggtgaggaaatcacagcagcttccgacttctgacagaacccagaga 441
           || | ||| | || ||| ||||||||||||  |||||| | ||| || |||| |||||||
Sbjct: 583 gcaacgtaaaacagggtcaggaaatcacagaggcttccaatttcagaaagaatccagaga 524

                                                                       
Query: 442 ccagcaatcacaccaaggaatttcttcagatcatgccccattgcgatctcccggaacaag 501
            || | ||||| || |  || ||| |||| |||||||| |  |  |||||||| | ||||
Sbjct: 523 gcaacgatcacgcctaaaaacttcatcaggtcatgccctagagaaatctcccgaagcaag 464

                                                                       
Query: 502 tgaagtgatctgttgacgtcgttgcgtaatgcccgtgatacattcacagcgaggtcttca 561
           ||||||| |  ||||| |||  |||| | |||  |||  ||||||||||| || ||||||
Sbjct: 463 tgaagtgcttggttgatgtcagtgcgcagtgctagtgcaacattcacagcaagatcttca 404

                                                        
Query: 562 ggtatctcaactacaggaatatccggtgggctcttcttgatgaag 606
           | |||||  ||| | |||||||  ||||| |||||||||||||||
Sbjct: 403 gatatcttcacttctggaatattaggtggactcttcttgatgaag 359
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>dbj|AK072628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130B01, full
           insert sequence
          Length = 880

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 224/285 (78%)
 Strand = Plus / Minus

                                                                       
Query: 322 tgatccaccttgtcctggtacttatcgtacaagatcggcaccgtgtggatcatcaggaca 381
           ||||| ||||||||||| ||||| |  |||||||||||||| || |||| ||||| ||||
Sbjct: 525 tgatcaaccttgtcctgatacttgtgatacaagatcggcactgtatggagcatcaagaca 466

                                                                       
Query: 382 gcgatgtatatcaaggtgaggaaatcacagcagcttccgacttctgacagaacccagaga 441
           || | ||| | || ||| ||||||||||||  |||||| | ||| || |||| |||||||
Sbjct: 465 gcaacgtaaaacagggtcaggaaatcacagaggcttccaatttcagaaagaatccagaga 406

                                                                       
Query: 442 ccagcaatcacaccaaggaatttcttcagatcatgccccattgcgatctcccggaacaag 501
            || | ||||| || |  || ||| |||| |||||||| |  |  |||||||| | ||||
Sbjct: 405 gcaacgatcacgcctaaaaacttcatcaggtcatgccctagagaaatctcccgaagcaag 346

                                                                       
Query: 502 tgaagtgatctgttgacgtcgttgcgtaatgcccgtgatacattcacagcgaggtcttca 561
           ||||||| |  ||||| |||  |||| | |||  |||  ||||||||||| || ||||||
Sbjct: 345 tgaagtgcttggttgatgtcagtgcgcagtgctagtgcaacattcacagcaagatcttca 286

                                                        
Query: 562 ggtatctcaactacaggaatatccggtgggctcttcttgatgaag 606
           | |||||  ||| | |||||||  ||||| |||||||||||||||
Sbjct: 285 gatatcttcacttctggaatattaggtggactcttcttgatgaag 241
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>dbj|AK059921.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G09, full
           insert sequence
          Length = 1028

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 223/285 (78%)
 Strand = Plus / Minus

                                                                       
Query: 322 tgatccaccttgtcctggtacttatcgtacaagatcggcaccgtgtggatcatcaggaca 381
           ||||| ||||||||||| ||||| |  |||||||||||||| || |||| ||||| ||||
Sbjct: 692 tgatcaaccttgtcctgatacttgtgatacaagatcggcactgtatggagcatcaagaca 633

                                                                       
Query: 382 gcgatgtatatcaaggtgaggaaatcacagcagcttccgacttctgacagaacccagaga 441
           || | ||| | || ||| ||||||||||||  |||||| | ||| || |||| |||||||
Sbjct: 632 gcaacgtaaaacagggtcaggaaatcacagaggcttccaatttcagaaagaatccagaga 573

                                                                       
Query: 442 ccagcaatcacaccaaggaatttcttcagatcatgccccattgcgatctcccggaacaag 501
            || | ||||| || |  || ||| |||| |||||||| |  |  |||||||  | ||||
Sbjct: 572 gcaacgatcacgcctaaaaacttcatcaggtcatgccctagagaaatctccctaagcaag 513

                                                                       
Query: 502 tgaagtgatctgttgacgtcgttgcgtaatgcccgtgatacattcacagcgaggtcttca 561
           ||||||| |  ||||| |||  |||| | |||  |||  ||||||||||| || ||||||
Sbjct: 512 tgaagtgcttggttgatgtcagtgcgcagtgctagtgcaacattcacagcaagatcttca 453

                                                        
Query: 562 ggtatctcaactacaggaatatccggtgggctcttcttgatgaag 606
           | |||||  ||| | |||||||  ||||| |||||||||||||||
Sbjct: 452 gatatcttcacttctggaatattaggtggactcttcttgatgaag 408
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                           
Query: 322     tgatccaccttgtcctggtacttatcgtacaagatcggcaccgtgtggatcatcaggaca 381
               ||||| ||||||||||| ||||| |  |||||||||||||| || |||| ||||| ||||
Sbjct: 9498980 tgatcaaccttgtcctgatacttgtgatacaagatcggcactgtatggagcatcaagaca 9498921

                 
Query: 382     gc 383
               ||
Sbjct: 9498920 gc 9498919
to top
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0006C08
          Length = 151987

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 322    tgatccaccttgtcctggtacttatcgtacaagatcggcaccgtgtggatcatcaggaca 381
              ||||| ||||||||||| ||||| |  |||||||||||||| || |||| ||||| ||||
Sbjct: 112541 tgatcaaccttgtcctgatacttgtgatacaagatcggcactgtatggagcatcaagaca 112482

                
Query: 382    gc 383
              ||
Sbjct: 112481 gc 112480
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>ref|NM_191117.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 425 ctgacagaacccagagaccagcaatcacaccaaggaatttcttcagatca 474
           ||||||||| |||||| ||||| ||||||   ||||| ||||||||||||
Sbjct: 553 ctgacagaatccagagtccagcgatcacaatgaggaacttcttcagatca 504
to top
>gb|AC012569.18| Homo sapiens chromosome , clone RP11-8H2, complete sequence
          Length = 153276

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 50    aaatagctaatacatgcggagc 71
             ||||||||||||||||||||||
Sbjct: 52011 aaatagctaatacatgcggagc 51990
to top
>dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G09, full
           insert sequence
          Length = 1325

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 425 ctgacagaacccagagaccagcaatcacaccaaggaatttcttcagatca 474
           ||||||||| |||||| ||||| ||||||   ||||| ||||||||||||
Sbjct: 687 ctgacagaatccagagtccagcgatcacaatgaggaacttcttcagatca 638
to top
>dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H02, full
           insert sequence
          Length = 1181

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 425 ctgacagaacccagagaccagcaatcacaccaaggaatttcttcagatca 474
           ||||||||| |||||| ||||| ||||||   ||||| ||||||||||||
Sbjct: 678 ctgacagaatccagagtccagcgatcacaatgaggaacttcttcagatca 629
to top
>dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H05, full
           insert sequence
          Length = 731

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 425 ctgacagaacccagagaccagcaatcacaccaaggaatttcttcagatca 474
           ||||||||| |||||| ||||| ||||||   ||||| ||||||||||||
Sbjct: 198 ctgacagaatccagagtccagcgatcacaatgaggaacttcttcagatca 149
to top
>gb|AY112460.1| Zea mays CL9078_1 mRNA sequence
          Length = 686

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 425 ctgacagaacccagagaccagcaatcacaccaaggaatttcttcagatca 474
           |||| |||| ||||||||| ||||| |||   ||||||||||||||||||
Sbjct: 527 ctgaaagaagccagagacctgcaataacaattaggaatttcttcagatca 576
to top
>dbj|D28126.1|HUMATPSAS Human gene for ATP synthase alpha subunit, complete cds (exon 1 to
            12)
          Length = 18004

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 50   aaatagctaatacatgcggagc 71
            ||||||||||||||||||||||
Sbjct: 2668 aaatagctaatacatgcggagc 2647
to top
>emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 in linkage group 14,
             complete sequence
          Length = 221928

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   caagtgaagtgatctgttgac 518
             |||||||||||||||||||||
Sbjct: 62835 caagtgaagtgatctgttgac 62855
to top
>gb|AC003685.1|AC003685 Homo sapiens Xp22 BAC GS-542M4 (Genome Systems Human BAC library)
             complete sequence
          Length = 181795

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    acaaatagctaatacatgcgg 68
             |||||||||||||||||||||
Sbjct: 53886 acaaatagctaatacatgcgg 53906
to top
>gb|AY775058.1| Homo sapiens misshapen/NIKs-related kinase isoform beta (MINK)
           mRNA, complete cds, alternatively spliced
          Length = 3939

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 286 ccggggggctcttcttgatgaagg 263
to top
>gb|BC056810.1| Danio rerio zgc:63733, mRNA (cDNA clone MGC:63733 IMAGE:2639664),
           complete cds
          Length = 2648

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 gctcttcttgatgaaggtca 610
           ||||||||||||||||||||
Sbjct: 222 gctcttcttgatgaaggtca 241
to top
>ref|NM_001024937.1| Homo sapiens misshapen-like kinase 1 (zebrafish) (MINK1),
           transcript variant 4, mRNA
          Length = 4929

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 482 ccggggggctcttcttgatgaagg 459
to top
>ref|NM_015716.2| Homo sapiens misshapen-like kinase 1 (zebrafish) (MINK1),
           transcript variant 1, mRNA
          Length = 4878

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 482 ccggggggctcttcttgatgaagg 459
to top
>ref|NM_170663.2| Homo sapiens misshapen-like kinase 1 (zebrafish) (MINK1),
           transcript variant 2, mRNA
          Length = 4902

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 482 ccggggggctcttcttgatgaagg 459
to top
>ref|NM_153827.2| Homo sapiens misshapen-like kinase 1 (zebrafish) (MINK1),
           transcript variant 3, mRNA
          Length = 4989

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 482 ccggggggctcttcttgatgaagg 459
to top
>emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in linkage group 17,
              complete sequence
          Length = 171764

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    aggaatttcttcagatcatg 476
              ||||||||||||||||||||
Sbjct: 128656 aggaatttcttcagatcatg 128675
to top
>gb|AC002287.1|HUAC002287 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-237H1  ~complete genomic
              sequence, complete sequence
          Length = 188636

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 594    cttcttgatgaaggtcatag 613
              ||||||||||||||||||||
Sbjct: 127930 cttcttgatgaaggtcatag 127949
to top
>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence
          Length = 175727

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    cttgctcaaaaccttctggt 271
              ||||||||||||||||||||
Sbjct: 121447 cttgctcaaaaccttctggt 121466
to top
>gb|AC142330.1| Pan troglodytes BAC clone RP43-25K18 from 7, complete sequence
          Length = 187596

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    caaatagctaatacatgcgg 68
             ||||||||||||||||||||
Sbjct: 32600 caaatagctaatacatgcgg 32581
to top
>gb|AF509739.1| Loofa yellow mosaic virus DNA-A, complete sequence
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   ttttcagagttgcatataca 50
            ||||||||||||||||||||
Sbjct: 1021 ttttcagagttgcatataca 1002
to top
>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence
          Length = 175079

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||||||||| ||||||||||
Sbjct: 45896 acaaatagctaatgcatgcggagc 45919
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   cggcaccgtgtggatcatca 376
             ||||||||||||||||||||
Sbjct: 72285 cggcaccgtgtggatcatca 72304
to top
>gb|BC034673.1| Homo sapiens misshapen-like kinase 1 (zebrafish), transcript
           variant 3, mRNA (cDNA clone MGC:21111 IMAGE:4384442),
           complete cds
          Length = 5014

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 482 ccggggggctcttcttgatgaagg 459
to top
>ref|NM_200619.1| Danio rerio zgc:63733 (zgc:63733), mRNA
          Length = 2648

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 gctcttcttgatgaaggtca 610
           ||||||||||||||||||||
Sbjct: 222 gctcttcttgatgaaggtca 241
to top
>gb|AC020633.3| Homo sapiens 3 BAC RP11-65E22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148244

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||| ||||||||||||||||
Sbjct: 34763 acaaatacctaatacatgcggagc 34786
to top
>gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, complete sequence
          Length = 110907

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 563   gtatctcaactacaggaata 582
             ||||||||||||||||||||
Sbjct: 51233 gtatctcaactacaggaata 51252
to top
>gb|AY045719.1| Larus argentatus vitellogenin mRNA, complete cds
          Length = 5727

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gcagtagcaaaggtagcagt 25
            ||||||||||||||||||||
Sbjct: 3636 gcagtagcaaaggtagcagt 3655
to top
>ref|XM_697217.1| PREDICTED: Danio rerio hypothetical protein LOC554378 (LOC554378),
           mRNA
          Length = 1232

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 gctcttcttgatgaaggtca 610
           ||||||||||||||||||||
Sbjct: 223 gctcttcttgatgaaggtca 242
to top
>gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, complete sequence
          Length = 120871

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||||||||| ||||||||||
Sbjct: 99573 acaaatagctaatgcatgcggagc 99550
to top
>gb|AF320615.1|AF320615 Mus musculus Tnf receptor-associated factor 3 (Traf3) gene, partial
            sequence; and amnionless precursor protein (Amn) gene,
            complete cds
          Length = 14031

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  cttgctcaaaaccttctggt 271
            ||||||||||||||||||||
Sbjct: 2823 cttgctcaaaaccttctggt 2804
to top
>gb|AC130450.3| Homo sapiens chromosome 16 clone CTA-237H1, complete sequence
          Length = 183842

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 594    cttcttgatgaaggtcatag 613
              ||||||||||||||||||||
Sbjct: 123136 cttcttgatgaaggtcatag 123155
to top
>gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I21, complete sequence
          Length = 123050

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||||||||| ||||||||||
Sbjct: 23505 acaaatagctaatgcatgcggagc 23528
to top
>gb|AF288092.1| Naegleria gruberi mitochondrial DNA, complete genome
          Length = 49843

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tatacaaatagctaatacat 64
             ||||||||||||||||||||
Sbjct: 42463 tatacaaatagctaatacat 42444
to top
>gb|BC094686.1| Homo sapiens cDNA clone IMAGE:30389401, containing frame-shift
           errors
          Length = 5060

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 573 ccggggggctcttcttgatgaagg 550
to top
>gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, complete sequence
          Length = 185967

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||| ||||||||||||||||
Sbjct: 21979 acaaatacctaatacatgcggagc 22002
to top
>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence
          Length = 183794

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 563    gtatctcaactacaggaata 582
              ||||||||||||||||||||
Sbjct: 152225 gtatctcaactacaggaata 152244
to top
>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18,
              complete sequence
          Length = 214763

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     tccagttttcagagttgcat 45
              ||||||||||||||||||||
Sbjct: 158791 tccagttttcagagttgcat 158810
to top
>emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in linkage group 10,
             complete sequence
          Length = 197451

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 591   gctcttcttgatgaaggtca 610
             ||||||||||||||||||||
Sbjct: 20922 gctcttcttgatgaaggtca 20903
to top
>gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, complete sequence
          Length = 154308

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   cccagagaccagcaatcaca 453
             ||||||||||||||||||||
Sbjct: 65976 cccagagaccagcaatcaca 65957
to top
>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete
             sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||||||||| ||||||||||
Sbjct: 77463 acaaatagctaatgcatgcggagc 77486
to top
>dbj|AP006246.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-159M14, complete
              sequence
          Length = 178517

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     acaaatagctaatacatgcggagc 71
              ||||||||||||| ||||||||||
Sbjct: 168098 acaaatagctaatgcatgcggagc 168121
to top
>gb|DQ294276.1| Solanum tuberosum clone 171G04 putative 24 kDa seed maturation
           protein-like protein mRNA, complete cds
          Length = 1080

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 430 agaacccagagaccagcaatcacaccaaggaatttcttca 469
           |||||||| | ||||||||| ||| | |||||||||||||
Sbjct: 618 agaacccacaaaccagcaataacagcgaggaatttcttca 579
to top
>gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, complete sequence
          Length = 210193

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 cccagagaccagcaatcaca 453
           ||||||||||||||||||||
Sbjct: 471 cccagagaccagcaatcaca 490
to top
>gb|AC002497.1|AC002497 Human Cosmid g1940a142 from 7q31.3, complete sequence
          Length = 40846

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   caaatagctaatacatgcgg 68
            ||||||||||||||||||||
Sbjct: 6829 caaatagctaatacatgcgg 6810
to top
>dbj|AB209450.1| Homo sapiens mRNA for misshapen/NIK-related kinase isoform 2
           variant protein
          Length = 5483

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 471 ccggggggctcttcttgatgaagg 448
to top
>dbj|AB035698.1| Homo sapiens mRNA for Misshapen/NIK-related kinase MINK-1, complete
           cds
          Length = 3888

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 286 ccggggggctcttcttgatgaagg 263
to top
>dbj|AB041926.1| Homo sapiens mRNA for GCK family kinase MINK-2, complete cds
          Length = 4863

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 584 ccggtgggctcttcttgatgaagg 607
           |||| |||||||||||||||||||
Sbjct: 470 ccggggggctcttcttgatgaagg 447
to top
>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 6/11
          Length = 156909

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    acaaatagctaatacatgcggagc 71
             ||||||||||||| ||||||||||
Sbjct: 25036 acaaatagctaatgcatgcggagc 25059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,275,963
Number of Sequences: 3902068
Number of extensions: 4275963
Number of successful extensions: 77359
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77224
Number of HSP's gapped (non-prelim): 131
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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