ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15c15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
2gb|AY104635.1| Zea mays PCO115798 mRNA sequence 240 5e-60
3gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
6gb|AC096584.1| Homo sapiens BAC clone RP11-663G9 from 2, complet... 48 0.037
7ref|XM_466214.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.58
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
9dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
10dbj|AK067393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
11dbj|AK063555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
12gb|AC113293.16| Mus musculus chromosome 3, clone RP23-418O15, co... 44 0.58
13gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete s... 42 2.3
14gb|AC144868.2| Xenopus tropicalis clone ISB-379D13, complete seq... 42 2.3
15gb|AC144866.2| Xenopus tropicalis clone ISB-367O10, complete seq... 42 2.3
16gb|AC092213.4| Homo sapiens BAC clone RP11-190I6 from 7, complet... 42 2.3
17gb|AC007270.2| Homo sapiens BAC clone GS1-77A9 from 7, complete ... 42 2.3
18gb|AC144820.2| Xenopus tropicalis clone ISB-286C6, complete sequ... 42 2.3
19emb|AL353630.12| Human DNA sequence from clone RP11-37K5 on chro... 42 2.3
20emb|Y00501.1|XTGLB Xenopus tropicalis larval beta-globin gene 42 2.3
21emb|AL772217.10| Mouse DNA sequence from clone RP23-160K5 on chr... 42 2.3
22emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chr... 42 2.3
23gb|AC166770.7| Mus musculus chromosome 1, clone RP23-205P24, com... 40 9.1
24gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, comp... 40 9.1
25gb|AC139347.4| Mus musculus BAC clone RP24-334F11 from chromosom... 40 9.1
26ref|XM_653926.1| Aspergillus nidulans FGSC A4 phosphate-non-repr... 40 9.1
27gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome ... 40 9.1
28ref|XM_809116.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.1
29emb|BX649222.6| Chicken DNA sequence from clone WAG-90O5, comple... 40 9.1
30emb|BX957220.1| Methanococcus maripaludis S2 complete genome; se... 40 9.1
31gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 9.1
32gb|AC107032.4| Homo sapiens 12 BAC RP11-613M5 (Roswell Park Canc... 40 9.1
33gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswel... 40 9.1
34gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswel... 40 9.1
35gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 40 9.1
36dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, ... 40 9.1
37gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, comple... 40 9.1
38gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 40 9.1
39dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.1
40gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, co... 40 9.1
41emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch... 40 9.1
42gb|M96993.1|EMEACIDPHO Aspergillus nidulans (strain FGSC4) acid ... 40 9.1
43dbj|AP001050.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 9.1 
>dbj|AK111924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C03, full
            insert sequence
          Length = 1356

 Score =  357 bits (180), Expect = 3e-95
 Identities = 373/439 (84%), Gaps = 3/439 (0%)
 Strand = Plus / Minus

                                                                        
Query: 225  cctttaccatcagctgtgtcaaaataaaagaaactcttgatcgtgtcgcccttacaagat 284
            |||||||||||||| | |||  |||| |||||| |||||||||  || ||||||| ||||
Sbjct: 1064 cctttaccatcagcggcgtcgtaatagaagaaattcttgatcggatcacccttaccagat 1005

                                                                        
Query: 285  atagacttgatcacctcctgaccaagaatgccaccaaggattgcacatacaggaggatgt 344
            || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1004 attgacttaatcacctcctgaccaagaatgccgccaaggattgcacatacaggaggatgt 945

                                                                        
Query: 345  tccttctttccagctgctaaaagccgttccagtagagccgtaggaatttgagactcgctt 404
            | |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 944  tgcttctttccagctgctaaaagccgttccaggagagcagtaggaatttgagactcactt 885

                                                                        
Query: 405  aaagacattctatcacacatatccttcctccaagccaaaactgcaggtagatcagaaagt 464
            ||||||||| |||||||||| |||||||||  |||||||||||||||| |||||||||||
Sbjct: 884  aaagacattttatcacacatgtccttcctcagagccaaaactgcaggtcgatcagaaagt 825

                                                                        
Query: 465  gctgtctcaccaggattgcgcccttcagataattcataactttccaagactctcatggcg 524
            | || ||||| || |||||| ||||||||| | |||||| | ||||  ||||||||||| 
Sbjct: 824  gatgcctcacaagcattgcggccttcagatgactcataattctccagtactctcatggca 765

                                                                        
Query: 525  tagtacagtttagttgnnnnnnngggcagattcttccagggcacagaaatagcttcctgc 584
             |||||||||||||||        || | |||||||||||| || || ||||||||||| 
Sbjct: 764  aagtacagtttagttgtttttcttggtaaattcttccagggtacggagatagcttcctgg 705

                                                                        
Query: 585  aggctagcatatgtcaactcctgctgttcaggttctcctccaggcttcttctgaagataa 644
            || || | ||||| ||||||||   |||  ||||| ||||||     |||||||| ||| 
Sbjct: 704  agacttggatatgccaactcctttggtttgggttcacctcca---accttctgaacatag 648

                               
Query: 645  ctatggttctgcaaatcaa 663
            |||||||||||||||||||
Sbjct: 647  ctatggttctgcaaatcaa 629
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>gb|AY104635.1| Zea mays PCO115798 mRNA sequence
          Length = 1324

 Score =  240 bits (121), Expect = 5e-60
 Identities = 253/297 (85%)
 Strand = Plus / Minus

                                                                        
Query: 207  gggatgtcctccatgacacctttaccatcagctgtgtcaaaataaaagaaactcttgatc 266
            ||||| ||||| |||||||||||||| |||||    || ||||| |||||| ||||||  
Sbjct: 1092 gggatatcctcgatgacacctttaccgtcagccacatcgaaatagaagaaattcttgact 1033

                                                                        
Query: 267  gtgtcgcccttacaagatatagacttgatcacctcctgaccaagaatgccaccaaggatt 326
            |  |||||||| || ||||| || ||||||||||||||||||||||| ||||||||||| 
Sbjct: 1032 ggatcgcccttgcaggatatcgatttgatcacctcctgaccaagaataccaccaaggata 973

                                                                        
Query: 327  gcacatacaggaggatgttccttctttccagctgctaaaagccgttccagtagagccgta 386
            ||||||||||||||||| |||||||||||||||||||  || |||||||  ||||  |||
Sbjct: 972  gcacatacaggaggatgctccttctttccagctgctagcagtcgttccacgagagtagta 913

                                                                        
Query: 387  ggaatttgagactcgcttaaagacattctatcacacatatccttcctccaagccaaaact 446
            |||||  |||||||  | ||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 912  ggaatacgagactcattcaaagacattttatcacacatatccttcctccgagccagaact 853

                                                                     
Query: 447  gcaggtagatcagaaagtgctgtctcaccaggattgcgcccttcagataattcataa 503
            |||  || ||||||||||| ||| || |||||  |||||||||||||||||||||||
Sbjct: 852  gcatctatatcagaaagtgttgtttcgccagggctgcgcccttcagataattcataa 796



 Score =  115 bits (58), Expect = 2e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                       
Query: 558 ttccagggcacagaaatagcttcctgcaggctagcatatgtcaactcctgctgttcaggt 617
           ||||| |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| |
Sbjct: 741 ttccaaggcacagagatagcttcctgaaggctagaatatgtcaactcctgttgttcagtt 682

                                                         
Query: 618 tctcctccaggcttcttctgaagataactatggttctgcaaatcaa 663
            ||||||||||||| ||||||| ||| ||||| ||||| |||||||
Sbjct: 681 gctcctccaggctttttctgaacatagctatgcttctgtaaatcaa 636
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>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0018F17, complete sequence
          Length = 104291

 Score =  178 bits (90), Expect = 2e-41
 Identities = 105/110 (95%)
 Strand = Plus / Minus

                                                                         
Query: 301   cctgaccaagaatgccaccaaggattgcacatacaggaggatgttccttctttccagctg 360
             |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 54866 cctgaccaagaatgccgccaaggattgcacatacaggaggatgttgcttctttccagctg 54807

                                                               
Query: 361   ctaaaagccgttccagtagagccgtaggaatttgagactcgcttaaagac 410
             |||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 54806 ctaaaagccgttccaggagagcagtaggaatttgagactcacttaaagac 54757



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                         
Query: 410   cattctatcacacatatccttcctccaagccaaaactgcaggtagatcagaaagtgctgt 469
             |||| |||||||||| |||||||||  |||||||||||||||| |||||||||||| || 
Sbjct: 54680 cattttatcacacatgtccttcctcagagccaaaactgcaggtcgatcagaaagtgatgc 54621

                                               
Query: 470   ctcaccaggattgcgcccttcagataattcataa 503
             ||||| || |||||| ||||||||| | ||||||
Sbjct: 54620 ctcacaagcattgcggccttcagatgactcataa 54587



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 225   cctttaccatcagctgtgtcaaaataaaagaaactcttgatcgtgtcgcccttacaagat 284
             |||||||||||||| | |||  |||| |||||| |||||||||  || ||||||| ||||
Sbjct: 55906 cctttaccatcagcggcgtcgtaatagaagaaattcttgatcggatcacccttaccagat 55847

                                 
Query: 285   atagacttgatcacctcctg 304
             || ||||| |||||||||||
Sbjct: 55846 attgacttaatcacctcctg 55827



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 635   ctgaagataactatggttctgcaaatcaa 663
             ||||| ||| |||||||||||||||||||
Sbjct: 52537 ctgaacatagctatggttctgcaaatcaa 52509
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  178 bits (90), Expect = 2e-41
 Identities = 105/110 (95%)
 Strand = Plus / Minus

                                                                            
Query: 301      cctgaccaagaatgccaccaaggattgcacatacaggaggatgttccttctttccagctg 360
                |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 17080910 cctgaccaagaatgccgccaaggattgcacatacaggaggatgttgcttctttccagctg 17080851

                                                                  
Query: 361      ctaaaagccgttccagtagagccgtaggaatttgagactcgcttaaagac 410
                |||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 17080850 ctaaaagccgttccaggagagcagtaggaatttgagactcacttaaagac 17080801



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                            
Query: 410      cattctatcacacatatccttcctccaagccaaaactgcaggtagatcagaaagtgctgt 469
                |||| |||||||||| |||||||||  |||||||||||||||| |||||||||||| || 
Sbjct: 17080724 cattttatcacacatgtccttcctcagagccaaaactgcaggtcgatcagaaagtgatgc 17080665

                                                  
Query: 470      ctcaccaggattgcgcccttcagataattcataa 503
                ||||| || |||||| ||||||||| | ||||||
Sbjct: 17080664 ctcacaagcattgcggccttcagatgactcataa 17080631



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 225      cctttaccatcagctgtgtcaaaataaaagaaactcttgatcgtgtcgcccttacaagat 284
                |||||||||||||| | |||  |||| |||||| |||||||||  || ||||||| ||||
Sbjct: 17081950 cctttaccatcagcggcgtcgtaatagaagaaattcttgatcggatcacccttaccagat 17081891

                                    
Query: 285      atagacttgatcacctcctg 304
                || ||||| |||||||||||
Sbjct: 17081890 attgacttaatcacctcctg 17081871



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 635      ctgaagataactatggttctgcaaatcaa 663
                ||||| ||| |||||||||||||||||||
Sbjct: 17078581 ctgaacatagctatggttctgcaaatcaa 17078553
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  178 bits (90), Expect = 2e-41
 Identities = 105/110 (95%)
 Strand = Plus / Minus

                                                                            
Query: 301      cctgaccaagaatgccaccaaggattgcacatacaggaggatgttccttctttccagctg 360
                |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 17175591 cctgaccaagaatgccgccaaggattgcacatacaggaggatgttgcttctttccagctg 17175532

                                                                  
Query: 361      ctaaaagccgttccagtagagccgtaggaatttgagactcgcttaaagac 410
                |||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 17175531 ctaaaagccgttccaggagagcagtaggaatttgagactcacttaaagac 17175482



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                            
Query: 410      cattctatcacacatatccttcctccaagccaaaactgcaggtagatcagaaagtgctgt 469
                |||| |||||||||| |||||||||  |||||||||||||||| |||||||||||| || 
Sbjct: 17175405 cattttatcacacatgtccttcctcagagccaaaactgcaggtcgatcagaaagtgatgc 17175346

                                                  
Query: 470      ctcaccaggattgcgcccttcagataattcataa 503
                ||||| || |||||| ||||||||| | ||||||
Sbjct: 17175345 ctcacaagcattgcggccttcagatgactcataa 17175312



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 225      cctttaccatcagctgtgtcaaaataaaagaaactcttgatcgtgtcgcccttacaagat 284
                |||||||||||||| | |||  |||| |||||| |||||||||  || ||||||| ||||
Sbjct: 17176631 cctttaccatcagcggcgtcgtaatagaagaaattcttgatcggatcacccttaccagat 17176572

                                    
Query: 285      atagacttgatcacctcctg 304
                || ||||| |||||||||||
Sbjct: 17176571 attgacttaatcacctcctg 17176552



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 635      ctgaagataactatggttctgcaaatcaa 663
                ||||| ||| |||||||||||||||||||
Sbjct: 17173262 ctgaacatagctatggttctgcaaatcaa 17173234
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>gb|AC096584.1| Homo sapiens BAC clone RP11-663G9 from 2, complete sequence
          Length = 15672

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 209  gatgtcctccatgacacctttaccatca 236
            ||||||||||||||||| ||||||||||
Sbjct: 9359 gatgtcctccatgacacatttaccatca 9332
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>ref|XM_466214.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2425

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 575 agcttcctgcaggctagcatat 596
           ||||||||||||||||||||||
Sbjct: 527 agcttcctgcaggctagcatat 506
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 575      agcttcctgcaggctagcatat 596
                ||||||||||||||||||||||
Sbjct: 21086336 agcttcctgcaggctagcatat 21086357
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 575   agcttcctgcaggctagcatat 596
             ||||||||||||||||||||||
Sbjct: 88081 agcttcctgcaggctagcatat 88102
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>dbj|AK067393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B07, full
           insert sequence
          Length = 2425

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 575 agcttcctgcaggctagcatat 596
           ||||||||||||||||||||||
Sbjct: 527 agcttcctgcaggctagcatat 506
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>dbj|AK063555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E08, full
           insert sequence
          Length = 1597

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 575 agcttcctgcaggctagcatat 596
           ||||||||||||||||||||||
Sbjct: 548 agcttcctgcaggctagcatat 527
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>gb|AC113293.16| Mus musculus chromosome 3, clone RP23-418O15, complete sequence
          Length = 179590

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 245   aaaataaaagaaactcttgatc 266
             ||||||||||||||||||||||
Sbjct: 46912 aaaataaaagaaactcttgatc 46933
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>gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete sequence
          Length = 157383

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 574   tagcttcctgcaggctagcat 594
             |||||||||||||||||||||
Sbjct: 12525 tagcttcctgcaggctagcat 12545
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>gb|AC144868.2| Xenopus tropicalis clone ISB-379D13, complete sequence
          Length = 63594

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 574  tagcttcctgcaggctagcat 594
            |||||||||||||||||||||
Sbjct: 2675 tagcttcctgcaggctagcat 2695
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>gb|AC144866.2| Xenopus tropicalis clone ISB-367O10, complete sequence
          Length = 57987

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 574   tagcttcctgcaggctagcat 594
             |||||||||||||||||||||
Sbjct: 42975 tagcttcctgcaggctagcat 42995
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>gb|AC092213.4| Homo sapiens BAC clone RP11-190I6 from 7, complete sequence
          Length = 137237

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 346    ccttctttccagctgctaaaa 366
              |||||||||||||||||||||
Sbjct: 118797 ccttctttccagctgctaaaa 118777
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>gb|AC007270.2| Homo sapiens BAC clone GS1-77A9 from 7, complete sequence
          Length = 182958

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   ccttctttccagctgctaaaa 366
             |||||||||||||||||||||
Sbjct: 91388 ccttctttccagctgctaaaa 91408
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>gb|AC144820.2| Xenopus tropicalis clone ISB-286C6, complete sequence
          Length = 103933

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 574   tagcttcctgcaggctagcat 594
             |||||||||||||||||||||
Sbjct: 43964 tagcttcctgcaggctagcat 43984
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>emb|AL353630.12| Human DNA sequence from clone RP11-37K5 on chromosome 9 Contains STSs
             and GSSs, complete sequence
          Length = 81566

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 488   ttcagataattcataactttc 508
             |||||||||||||||||||||
Sbjct: 74633 ttcagataattcataactttc 74653
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>emb|Y00501.1|XTGLB Xenopus tropicalis larval beta-globin gene
          Length = 4051

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 574 tagcttcctgcaggctagcat 594
           |||||||||||||||||||||
Sbjct: 462 tagcttcctgcaggctagcat 482
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>emb|AL772217.10| Mouse DNA sequence from clone RP23-160K5 on chromosome 2, complete
             sequence
          Length = 202067

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 197   cggggttggggggatgtcctc 217
             |||||||||||||||||||||
Sbjct: 46799 cggggttggggggatgtcctc 46819
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>emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chromosome 1, complete
             sequence
          Length = 173053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 443   aactgcaggtagatcagaaag 463
             |||||||||||||||||||||
Sbjct: 58003 aactgcaggtagatcagaaag 58023
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>gb|AC166770.7| Mus musculus chromosome 1, clone RP23-205P24, complete sequence
          Length = 213942

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 555   ttcttccagggcacagaaat 574
             ||||||||||||||||||||
Sbjct: 17988 ttcttccagggcacagaaat 17969
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>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence
          Length = 194413

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   ttcttccagggcacagaaat 574
             ||||||||||||||||||||
Sbjct: 60581 ttcttccagggcacagaaat 60600
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>gb|AC139347.4| Mus musculus BAC clone RP24-334F11 from chromosome 16, complete sequence
          Length = 193398

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    tcaaaataaaagaaactctt 262
              ||||||||||||||||||||
Sbjct: 105084 tcaaaataaaagaaactctt 105065
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>ref|XM_653926.1| Aspergillus nidulans FGSC A4 phosphate-non-repressible acid
           phosphatase precursor (AN1414.2), mRNA
          Length = 1056

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 556 tcttccagggcacagaaata 575
           ||||||||||||||||||||
Sbjct: 253 tcttccagggcacagaaata 234
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>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence
          Length = 184002

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 590   agcatatgtcaactcctgctgttc 613
             ||||| ||||||||||||||||||
Sbjct: 29227 agcatttgtcaactcctgctgttc 29204
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>ref|XM_809116.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504213.60) partial mRNA
          Length = 3207

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   ctgcctctgccaccgatatg 99
            ||||||||||||||||||||
Sbjct: 2428 ctgcctctgccaccgatatg 2409
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>emb|BX649222.6| Chicken DNA sequence from clone WAG-90O5, complete sequence
          Length = 121741

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 607   gctgttcaggttctcctcca 626
             ||||||||||||||||||||
Sbjct: 20204 gctgttcaggttctcctcca 20223
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>emb|BX957220.1| Methanococcus maripaludis S2 complete genome; segment 2/5
          Length = 349648

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   aaaataaaagaaactcttga 264
             ||||||||||||||||||||
Sbjct: 86721 aaaataaaagaaactcttga 86702
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   cacagaaatagcttcctgca 585
             ||||||||||||||||||||
Sbjct: 20162 cacagaaatagcttcctgca 20143
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>gb|AC107032.4| Homo sapiens 12 BAC RP11-613M5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162515

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   ctgtgtcaaaataaaagaaa 257
             ||||||||||||||||||||
Sbjct: 20513 ctgtgtcaaaataaaagaaa 20532
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>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 174616

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 232  catcagctgtgtcaaaataaaaga 255
            |||||||||||| |||||||||||
Sbjct: 8824 catcagctgtgttaaaataaaaga 8847
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>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170356

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    catcagctgtgtcaaaataaaaga 255
              |||||||||||| |||||||||||
Sbjct: 127308 catcagctgtgttaaaataaaaga 127331
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>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete
             sequence
          Length = 154626

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   ttcagataattcataacttt 507
             ||||||||||||||||||||
Sbjct: 37467 ttcagataattcataacttt 37448
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>dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, map 22, complete
             sequences
          Length = 144611

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    atatggagttgtcacatgtt 114
             ||||||||||||||||||||
Sbjct: 53360 atatggagttgtcacatgtt 53379
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>gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, complete sequence
          Length = 159591

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   ctgtgtcaaaataaaagaaa 257
             ||||||||||||||||||||
Sbjct: 68288 ctgtgtcaaaataaaagaaa 68307
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>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
              sequence
          Length = 244140

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    catcagctgtgtcaaaataaaaga 255
              |||||||||||| |||||||||||
Sbjct: 138593 catcagctgtgttaaaataaaaga 138616
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>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     atatggagttgtcacatgtt 114
              ||||||||||||||||||||
Sbjct: 260305 atatggagttgtcacatgtt 260324
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>gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, complete sequence
          Length = 239588

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 549    ggcagattcttccagggcacagaa 572
              ||||||||||||||||| ||||||
Sbjct: 189767 ggcagattcttccaggggacagaa 189744
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>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete
             sequence
          Length = 226457

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   cacagaaatagcttcctgca 585
             ||||||||||||||||||||
Sbjct: 34905 cacagaaatagcttcctgca 34924
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>gb|M96993.1|EMEACIDPHO Aspergillus nidulans (strain FGSC4) acid phosphatase gene, complete
            cds
          Length = 2905

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 556  tcttccagggcacagaaata 575
            ||||||||||||||||||||
Sbjct: 1816 tcttccagggcacagaaata 1797
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>dbj|AP001050.1| Homo sapiens genomic DNA, chromosome 21, clone:KB953G5, MX1-D21S171
             region, complete sequence
          Length = 98992

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    atatggagttgtcacatgtt 114
             ||||||||||||||||||||
Sbjct: 38222 atatggagttgtcacatgtt 38241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,342,740
Number of Sequences: 3902068
Number of extensions: 6342740
Number of successful extensions: 115702
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115527
Number of HSP's gapped (non-prelim): 174
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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