ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags14n10 |
|---|---|
| Clone Library Name | barley_pub |
>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1054 Score = 37.0 bits (84), Expect = 0.054 Identities = 22/68 (32%), Positives = 33/68 (48%) Frame = -3 Query: 418 SSISRDKPSILPVNDTSKNKTPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGP 239 S S+ P+ +DT K+ T SPKSP ++RT ++ +EH + SSS Sbjct: 112 SPSSKTAPTPAGASDTIKSTTKRSPKSP--TTRTIKVVESEELTEEHSDSENQESSSSSS 169 Query: 238 GSSDVLEK 215 SS + K Sbjct: 170 SSSSTIRK 177 Score = 31.2 bits (69), Expect = 3.0 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Frame = -3 Query: 580 SKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGSSVRQGQ------------TP- 440 SK + + N+ + NT + +D++GS + G+ TP Sbjct: 181 SKNSANRELQKNPNVKDNKKNTPKKKPNPEPPAVDEAGSGLDNGEFKLTPPPPDPPTTPH 240 Query: 439 -KIESSPGSSISRD---KPSILPVNDTSK------NK--TPESPKSPAVSSRTYAATKNN 296 K+ +SP ++ ++ KPS+ P ++TSK NK T E+ ++ A + ++ A+ K Sbjct: 241 SKVATSPKTTAAKPVTPKPSLAPNSETSKEASLASNKETTVETKETTATNKQSSASKKKT 300 Query: 295 VAVQEHHPPAAERSSSVGPGSS 230 +V+E V P S+ Sbjct: 301 TSVKETRSAEKTSDKDVEPTST 322
>MYCB2_HUMAN (O75592) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4641 Score = 35.4 bits (80), Expect = 0.16 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 2/136 (1%) Frame = -3 Query: 649 LRPDCGVNRTIIEKLSVKAPSA--ESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLD 476 L+PD ++RT ++ + + S+ +LK+ A + D S + N D Sbjct: 2704 LKPDGRMSRTTADQKKPRGTESLSASESLILKSDAAKLRSDSHSRSLSPNHNTLQTLKSD 2763 Query: 475 DSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESPKSPAVSSRTYAATKNN 296 S + ++P PGS +S KP LP N +S + SP+S + + K+ Sbjct: 2764 GRMPSSSRAESP----GPGSRLSSPKPKTLPANRSSPSGA-SSPRSSSPHDKN-LPQKST 2817 Query: 295 VAVQEHHPPAAERSSS 248 V+ P ERS S Sbjct: 2818 APVKTKLDPPRERSKS 2833
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 35.0 bits (79), Expect = 0.21 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Frame = -3 Query: 466 SSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPES---PKSPAV--SSRTYAATK 302 +SVR+ +TP + SP + PS+ + +TP S PKSP+V S + Sbjct: 435 ASVRRSRTPSVPKSPSARPRSKSPSVRAEITDDEGETPPSSVRPKSPSVRPKSPSVRPRS 494 Query: 301 NNVAVQEHHPPAAERSSS 248 + +V+ P A RS S Sbjct: 495 KSPSVRPKSPSARPRSKS 512 Score = 32.7 bits (73), Expect = 1.0 Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 31/156 (19%) Frame = -3 Query: 598 KAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGSSVRQGQTP--KIESS 425 +A A K+ LKA+A Y L T ++ K D +D S ++ Q+P I S Sbjct: 337 RAELALLKVPELKAMALSYGLKNFKDKTPSQLRKN--DFIDFIILSTQKSQSPPPSIRSK 394 Query: 424 PGSSISRDKPSILPVNDTS-------------------------KNKTPESPKSPAVSSR 320 P SS + K L D S +++TP PKSP+ R Sbjct: 395 PRSSSPKYKTKDLVTTDESDGEIVVKKITRKPKSPRRSPPASVRRSRTPSVPKSPSARPR 454 Query: 319 TYA-ATKNNVAVQEHHPPAAE---RSSSVGPGSSDV 224 + + + + + E P + +S SV P S V Sbjct: 455 SKSPSVRAEITDDEGETPPSSVRPKSPSVRPKSPSV 490
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 34.7 bits (78), Expect = 0.27 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Frame = -3 Query: 652 ELRPDCGVNRTIIEKLSVKAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYE----- 488 E PD I + V+ E K ++++ HE +D + ++E + + + Sbjct: 3364 EAEPDPDPEAEIESEPVVEVLDPEELNKAVQSLKHEDMMDIKADTPQSERDLQIDTDTEE 3423 Query: 487 --DLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESPKSPAVSSRT 317 D D SG S++ +T + SSP SIS + P+ +T+ P P +S+ + Sbjct: 3424 NPDEADSSGPSLKIDETVQSSSSPEKSISNNSPT---PRETANIDIPNVESQPKLSNES 3479
>CDC27_YEAST (P38042) Anaphase-promoting complex subunit CDC27 (Cell division| control protein 27) (Anaphase-promoting complex subunit 3) Length = 758 Score = 34.3 bits (77), Expect = 0.35 Identities = 14/42 (33%), Positives = 28/42 (66%) Frame = -3 Query: 373 TSKNKTPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSS 248 T +NK ++PK+PA++S+T +A NN+++ P + + + S Sbjct: 296 TCQNKNTQTPKNPAINSKTSSALPNNISMNLVSPSSKQPTIS 337
>SWC4_EMENI (Q5B4T5) SWR1-complex protein 4| Length = 586 Score = 33.5 bits (75), Expect = 0.60 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = -3 Query: 514 EAEFNKKYEDLLDDSG-SSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESPKS 338 +A+ +KK +L G + GQTP I ++PGS+ D+S+ TP + Sbjct: 316 QADKSKKRRSILGPDGIAPTSGGQTPTIPNAPGSA-----------RDSSRADTPNGGTT 364 Query: 337 PAVSSRTYAATKNNVAVQE 281 + +++ AA N A Q+ Sbjct: 365 QSTTTKKAAAAANREAAQQ 383
>POLG_YEFV2 (P19901) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3411 Score = 33.1 bits (74), Expect = 0.78 Identities = 23/64 (35%), Positives = 36/64 (56%) Frame = +3 Query: 243 PTDDDLSAAGG*CS*TATLFLVAAYVLELTAGDFGDSGVLFLLVSLTGRIDGLSLEMEEP 422 P ++ L+AAG L +A +E G G+L +LVS+ GR+DG LE+++ Sbjct: 1357 PVNEALAAAGL----VGVLAGLAFQEMENFLGPIAVGGLLMMLVSVAGRVDG--LELKKL 1410 Query: 423 GELS 434 GE+S Sbjct: 1411 GEVS 1414
>POLG_YEFV1 (P03314) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3411 Score = 33.1 bits (74), Expect = 0.78 Identities = 23/64 (35%), Positives = 36/64 (56%) Frame = +3 Query: 243 PTDDDLSAAGG*CS*TATLFLVAAYVLELTAGDFGDSGVLFLLVSLTGRIDGLSLEMEEP 422 P ++ L+AAG L +A +E G G+L +LVS+ GR+DG LE+++ Sbjct: 1357 PVNEALAAAGL----VGVLAGLAFQEMENFLGPIAVGGLLMMLVSVAGRVDG--LELKKL 1410 Query: 423 GELS 434 GE+S Sbjct: 1411 GEVS 1414
>HDGF_HUMAN (P51858) Hepatoma-derived growth factor (HDGF) (High-mobility group| protein 1-like 2) (HMG-1L2) Length = 240 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/61 (27%), Positives = 32/61 (52%) Frame = -3 Query: 520 NTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESPK 341 N + ++ DLL+DS ++ + P+ E +++ ++P LP+ + KN TP P Sbjct: 149 NEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERP--LPM-EVEKNSTPSEPG 205 Query: 340 S 338 S Sbjct: 206 S 206
>ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin,| nonerythroid) Length = 3924 Score = 32.7 bits (73), Expect = 1.0 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%) Frame = -3 Query: 514 EAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISR-DKPSILPVNDTSKNKTPESPKS 338 + +F+ K +DL ++S +Q ++PG+ S K I+P +S +KTPE + Sbjct: 3717 QQDFSGKMQDLPEESSLEYQQEY---FVTTPGTETSETQKAMIVP---SSPSKTPEEVST 3770 Query: 337 PAVSSRTYAATK------NNVAVQEHHPPAAERSSS 248 PA + Y T + +QE P+ R S Sbjct: 3771 PAEEEKLYLQTPTSSERGGSPIIQEPEEPSEHREES 3806
>HDGF_BOVIN (Q9XSK7) Hepatoma-derived growth factor (HDGF)| Length = 239 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = -3 Query: 520 NTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESPK 341 N + ++ DLL+DS ++ + + E G+++ ++P LPV + KN TP P Sbjct: 149 NEKGALKRRAGDLLEDSPKRPKEAEDLEGEEKEGATLEGERP--LPV-EAEKNSTPSEPG 205 Query: 340 S 338 S Sbjct: 206 S 206
>PER_DROWI (Q03297) Period circadian protein (Fragment)| Length = 1093 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -3 Query: 442 PKIESSPGSSISRDKPSILPVNDTSKNKTPESPKSPAVSSRTYAATKNNVA 290 P+ SS +S+ + S + +DTSK + P+SP +P + T NN A Sbjct: 971 PQRPSSQATSVKAETGSNVAPSDTSKKEVPDSPITPTMGDFTLDQPCNNNA 1021
>2A5D_YEAST (P38903) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta isoform (PP2A, B subunit, B' delta isoform) (Protein RTS1) (Protein SCS1) Length = 757 Score = 32.0 bits (71), Expect = 1.7 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 18/153 (11%) Frame = -3 Query: 634 GVNRTIIEKLSVKAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGSSVR 455 G + +I+K + + S+ SK K + + + S+T + +KK S SS Sbjct: 4 GFKQRLIKKTTGSSSSSSSKKK-------DKEKEKEKSSTTSSTSKK-----PASASSSS 51 Query: 454 QGQTPKIESSPGSSISRDK---PSILPV------NDTSKNKTPESPKSPAVSSRTYAATK 302 G T SS GS + +K +P + TSK KT +P S + SSR+ + ++ Sbjct: 52 HGTTHSSASSTGSKSTTEKGKQSGSVPSQGKHHSSSTSKTKTATTPSSSSSSSRSSSVSR 111 Query: 301 NNVAV---------QEHHPPAAERSSSVGPGSS 230 + + QE + + S S GSS Sbjct: 112 SGSSSTKKTSSRKGQEQSKQSQQPSQSQKQGSS 144
>Y943_METJA (Q58353) Hypothetical protein MJ0943| Length = 417 Score = 32.0 bits (71), Expect = 1.7 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 2/100 (2%) Frame = -3 Query: 670 FVAAAMELRPDCGVNRTIIEKLSVKAPSAESKLKV-LKAIAHEYNLDWDSSNTEA-EFNK 497 F+A+ + PD GVN + E+ K+ LK ++ + +L D+ N+E+ +K Sbjct: 271 FLASINGISPDIGVNIEM-----------ENGEKINLKYVSMDVDLIIDNPNSESITIDK 319 Query: 496 KYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVN 377 ++ DD G S+ +G+ I +PG + K +I P+N Sbjct: 320 IILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNI-PIN 358
>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| (GAS2-related protein on chromosome 22) (GAR22 protein) Length = 681 Score = 32.0 bits (71), Expect = 1.7 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Frame = -3 Query: 424 PGSSISRDKPSILPVNDTSKNKTPESPKSPA------VSSRTYAATKNNVAVQEHHPPAA 263 PGS +P + PV+ S + PE+P P SR Y+ ++ A P Sbjct: 309 PGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLG 368 Query: 262 ERSSSVGPG 236 RS G G Sbjct: 369 TRSDDTGTG 377
>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1468 Score = 31.6 bits (70), Expect = 2.3 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%) Frame = -3 Query: 616 IEKLSVKAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGSSVRQGQTPK 437 +EK+S +P A++K ++ A++ N D S ++ + ++ +D V++ TPK Sbjct: 316 LEKMS--SPLADAK-RIPSAVSSPLNSPLDRSGIDSTVFQAKKEKVDSQYPPVQRLMTPK 372 Query: 436 IESSPGSSISRDKPSILPVNDTSKNKTPESPKSPAVS----SRTYAATKNNVAVQEHHPP 269 S + KPS+ P D K K+ V SR ++ + P Sbjct: 373 PVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKNISRQNREQESGFSYPNFSIP 432 Query: 268 AAE-RSSSVGPG 236 AA SS VG G Sbjct: 433 AANGLSSGVGGG 444
>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)| Length = 515 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Frame = -3 Query: 478 DDSGSSVRQGQTP-KIESSPGSSISRDKPSILPVNDTSKN-KTPESPKSPAVSSRTYAAT 305 D + S R +TP + P I P++L + + + +SP SP S++ + Sbjct: 53 DTTHSRHRYPETPPSLPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLS 112 Query: 304 KNNVAVQEHHPPAAERSSSVGPGS 233 + A Q HH ++ S +V P S Sbjct: 113 PSTAASQHHHHHSSSSSYAVSPTS 136
>AP3B1_MOUSE (Q9Z1T1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1105 Score = 31.2 bits (69), Expect = 3.0 Identities = 24/88 (27%), Positives = 35/88 (39%) Frame = -3 Query: 523 SNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESP 344 S EAE K + S + + K E+S S S ++ S + D+S ES Sbjct: 741 SQAEAERQKVAKRNSKTKRKSDSENREKKNENSKASESSSEESSSM--EDSSSESESESG 798 Query: 343 KSPAVSSRTYAATKNNVAVQEHHPPAAE 260 + R A K QE HPP+ + Sbjct: 799 SDSEPAPRNVAPAKERKPQQERHPPSKD 826
>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP40] Length = 1850 Score = 30.8 bits (68), Expect = 3.9 Identities = 28/99 (28%), Positives = 44/99 (44%) Frame = -3 Query: 526 SSNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPES 347 SS + N S SS R + SS SS SR S + SK+ + S Sbjct: 1169 SSRSSKSSNSSKRSSSKSSNSSKRSSSS----SSSSSSSSRSSSSSSSSSSNSKSSSSSS 1224 Query: 346 PKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGSS 230 KS + SSR+ +++K++ + ++ +SSS SS Sbjct: 1225 -KSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSS 1262
>CLA4_ASHGO (Q9HFW2) Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)| Length = 793 Score = 30.8 bits (68), Expect = 3.9 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = -3 Query: 490 EDLLDD-SGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESPKSPAVSSRTY 314 E LL++ S +S+ Q Q P +P SS+ P P+ + P P P + Sbjct: 370 ERLLNNLSETSLMQKQLPAKPVAPPSSVGPVAP---PLRLQPQRVAPGRPAQPGPHAPDT 426 Query: 313 AATKNNVAVQEHHPPAAERSSSVGPGS 233 N Q+H PPAA S +GP S Sbjct: 427 RPGGPNAMKQQHGPPAA-ASGQLGPDS 452
>KIN1_SCHPO (P22987) Protein kinase kin1 (EC 2.7.11.1)| Length = 891 Score = 30.8 bits (68), Expect = 3.9 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Frame = -3 Query: 451 GQTPKIESSPGSSISRDKPSILPVNDTSKNKT-PESPK---------SPAVSSRTYAATK 302 G +I +P SS+ PV TS N+T P P+ SP VS T A + Sbjct: 520 GNWNRIAKTPVSSVPSS-----PVQPTSYNRTLPPMPEVVAYKGDEESPRVSRNTSLARR 574 Query: 301 NNVAVQEHHPPAAERSSSVGPGSSDVLEK 215 + E H P+ +SS+ S + + Sbjct: 575 KPLPDTESHSPSPSATSSIKKNPSSIFRR 603
>SYR_STRR6 (Q8DN69) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 563 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 2/87 (2%) Frame = -3 Query: 613 EKLSVKAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGS--SVRQGQTP 440 + + V + K LKA+ E DW T F L+ G S R+G Sbjct: 326 KSIYVVGQEQSAHFKQLKAVLQEMGYDWSDDITHVPFG-----LVTKEGKKLSTRKGNVI 380 Query: 439 KIESSPGSSISRDKPSILPVNDTSKNK 359 +E + ++SR K I N +NK Sbjct: 381 LLEPTVAEAVSRAKVQIEAKNPELENK 407
>SYR_STRPN (Q54869) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 563 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 2/87 (2%) Frame = -3 Query: 613 EKLSVKAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGS--SVRQGQTP 440 + + V + K LKA+ E DW T F L+ G S R+G Sbjct: 326 KSIYVVGQEQSAHFKQLKAVLQEMGYDWSDDITHVPFG-----LVTKEGKKLSTRKGNVI 380 Query: 439 KIESSPGSSISRDKPSILPVNDTSKNK 359 +E + ++SR K I N +NK Sbjct: 381 LLEPTVAEAVSRAKVQIEAKNPELENK 407
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 30.8 bits (68), Expect = 3.9 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 14/112 (12%) Frame = -3 Query: 511 AEFNKKYEDLLDDSGSSVRQGQTPKIESSPG----------SSISRDKPSILPVNDTSKN 362 A+ KK ++ ++ + + +TP IE +P S +++ S+LP S+ Sbjct: 1062 AKGKKKETEVKAETEKQIPEKETPSIEKTPPAVATDQKLEESEVTKSLVSVLPEKKPSEE 1121 Query: 361 K----TPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGSSDVLE 218 + + K P + K + + PP A+ S+S G D+L+ Sbjct: 1122 EKALPADKKEKKPPAAEAPPLEEKKPIPDDQKLPPDAKPSASEGEEKRDLLK 1173
>KCNAW_DROME (P17972) Potassium voltage-gated channel protein Shaw (Shaw2)| Length = 498 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 420 ALPFPEISHRF--YLSTTQAKIKLPSPRNHLL*VQEHMLP 307 ALP P I F Y S TQA+ KLP R +L V++ P Sbjct: 406 ALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQP 445
>YOFA_CAEEL (Q09337) Hypothetical protein ZK1290.10 precursor| Length = 412 Score = 30.4 bits (67), Expect = 5.1 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 1/101 (0%) Frame = -3 Query: 529 DSSNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPE 350 D + + N++Y+D + SSVR T + P LP+ T + Sbjct: 35 DKAQEPIDDNEEYDDFIPTIDSSVRLDNTIPV------------PPALPIGLPIIQITTK 82 Query: 349 SPKSPA-VSSRTYAATKNNVAVQEHHPPAAERSSSVGPGSS 230 P+ PA ++S A VA PP A+R+S P S Sbjct: 83 EPQPPASLTSLPAAPPSAQVAPPAIRPPEAKRTSLEPPQPS 123
>TTC3_HUMAN (P53804) Tetratricopeptide repeat protein 3 (TPR repeat protein 3)| (TPR repeat protein D) Length = 2025 Score = 30.4 bits (67), Expect = 5.1 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 382 VNDTSKNKTPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGP 239 V + SK K P+ K V S T + T NN + + S S GP Sbjct: 1019 VKNKSKKKKPKDSKPMLVGSGTTSVTSNNEIITSSEDHSNRNSDSAGP 1066
>SRP40_YEAST (P32583) Suppressor protein SRP40| Length = 406 Score = 30.4 bits (67), Expect = 5.1 Identities = 25/119 (21%), Positives = 51/119 (42%) Frame = -3 Query: 583 ESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISR 404 ++K + + + E + SS++E+E + + S SS ++ S SS S Sbjct: 143 KAKTEPESSSSSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSS 202 Query: 403 DKPSILPVNDTSKNKTPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGSSD 227 S + +S + + +S S + SS + + ++ + + + SSS SSD Sbjct: 203 SSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSD 261
>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1424 Score = 30.4 bits (67), Expect = 5.1 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -2 Query: 290 RSRASPPCRGEIIVRWPRLVRRARKGPSCHCCSHPCLRRRLDSGRTC 150 +SR PCR + PRL+ +A PS HC R + S R C Sbjct: 31 QSRLQRPCRRRRLQPPPRLLIQAPIHPSRHCTQSRTAHRSIRSPRRC 77
>TSH_DROME (P22265) Protein teashirt| Length = 954 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Frame = -3 Query: 562 KAIAHEYNLDWDSSNTEAEFNKKYEDLL-----DDSGSSVRQGQTPKIESSPGSSISRDK 398 K + E ++ EAE K E + ++ +++ + +PK SS S +R Sbjct: 797 KPVKMEIKSEFVDEPNEAEETSKMEAAVVNGSATNNNNNIVERSSPKTPSSAASPQTR-- 854 Query: 397 PSILPVNDTSKNKTPESPKSPAVSSRTY 314 +LP ++++ +PKSPA S ++Y Sbjct: 855 --LLPPRSPAESQRSVTPKSPASSHKSY 880
>GLIP1_MOUSE (Q9CWG1) Glioma pathogenesis-related protein 1 precursor (GliPR 1)| Length = 255 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 356 SRVPEITCCEFKNICCHQE*CGRSRASPPCRGEIIVRW-PRLVRRARK-GPSCHCCSHPC 183 S +P+IT +F C RS+ SPP R + + W P+L + A+ SC +P Sbjct: 23 STLPDITNEDFIKECVQVHNQLRSKVSPPARNMLYMSWDPKLAQIAKAWTKSCEFKHNPQ 82 Query: 182 LRRRL 168 L R+ Sbjct: 83 LHSRI 87
>GVPD_HALME (Q02229) Protein gvpD| Length = 545 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = -3 Query: 376 DTSKNKTPESPKSPAVSSRTYAATKNNVAVQEHHPPA------AERSSSVG 242 DTS+ TP +SP V + T + K + E +PPA ERS+++G Sbjct: 371 DTSQTATPSDAESP-VGTETELSEKVETELSEENPPAPGEVVDTERSTTIG 420
>PITM3_MOUSE (Q3UHE1) Membrane-associated phosphatidylinositol transfer protein| 3 (Phosphatidylinositol transfer protein, membrane-associated 3) (Pyk2 N-terminal domain-interacting receptor 1) (NIR-1) Length = 974 Score = 30.0 bits (66), Expect = 6.6 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Frame = -3 Query: 478 DDSGSSVRQGQTPKIESSP-----GSSISRDKPSILPVNDTSKNKTPESPKSPAVSSRTY 314 D GSS R+G + +P S++ K D S E PK P ++ Sbjct: 285 DSPGSSSRKGSISSTQDTPVVVEEDCSLASSKRLSKSNVDVSSGVEDEDPKRPLPRKQSD 344 Query: 313 AATKNNVAVQEHHPPAAERSSSV 245 ++T + A+ +HH + SSV Sbjct: 345 SSTYDCEAITQHHAFLSSIHSSV 367
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 30.0 bits (66), Expect = 6.6 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 23/116 (19%) Frame = -3 Query: 601 VKAPSAESKLKVLKAIAHEYNLDWDSSNTEAEFNKKYEDLLDDSGSSVRQGQTP-KIESS 425 VK+P + K I E + + TE + ++S +SV++ +TP K++ Sbjct: 1480 VKSPVKKEKSPDATNIV-EVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEK 1538 Query: 424 PGSSISRDKP---SIL-------------------PVNDTSKNKTPESPKSPAVSS 323 P S +DK SI P + T K K+PE P SP S Sbjct: 1539 PKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKS 1594
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 30.0 bits (66), Expect = 6.6 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = -3 Query: 556 IAHEYNLDWDSSNTEAE-FNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPV 380 +AH+ ++D FN Y SV + P S+P + S PS P+ Sbjct: 439 MAHKISIDHMKQKPRYNNFNLPYTPASSSPVKSVANSRYPSPSSTPYQNCSSASPSYSPL 498 Query: 379 NDTSKNKTPESPKSPAVSSRTYAAT 305 + S N + S S + SS T +++ Sbjct: 499 SVDSSNVSSSSSSSSSQSSFTTSSS 523
>MRP_RAT (Q9EPH2) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) (Brain protein F52) Length = 198 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = -3 Query: 358 TPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGS 233 TPES + A + A +K A +E P AAE S+ GP S Sbjct: 147 TPESQEPQAKGAEASAVSKGGDAEEEAGPQAAEPSTPSGPES 188
>ENGC_HAEIN (P45339) Probable GTPase engC (EC 3.6.1.-)| Length = 346 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = +1 Query: 220 LARLTSLGQRTMISPR-----QGGDALERPHYSWWQHMFLNSQQVISGTREFYFCL 372 ++ + LGQ T S R QGG+ ++ P + L+++Q+ G REF + L Sbjct: 237 VSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVL 292
>MRP_MOUSE (P28667) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) (Brain protein F52) Length = 199 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = -3 Query: 358 TPESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGS 233 TPES + A + AA+K +E P AAE S+ GP S Sbjct: 147 TPESQEPQAKGAEASAASKEGDTEEEAGPQAAEPSTPSGPES 188
>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK) (Divergent of neuregulin-1) (DON-1)] Length = 850 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/74 (32%), Positives = 35/74 (47%) Frame = -3 Query: 529 DSSNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPE 350 DSS++ +E + +SGSS R SS SSISR P+ P + P Sbjct: 24 DSSSSSSERSSSSSSSSSESGSSSR-------SSSNNSSISR--PAAPPEPRPQQQPQPR 74 Query: 349 SPKSPAVSSRTYAA 308 SP + ++R+ AA Sbjct: 75 SPAARRAAARSRAA 88
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = -3 Query: 445 TPKIESSPGSSI--SRDKPSILPVNDTSKNKTPESPKSPAVSSRTYAATKNNVAVQEHHP 272 T +SP S++ S PS +S + TP S S +VSS T ++T+++ + Q+ Sbjct: 478 TESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSS-TASSTQSSTSTQQSST 536 Query: 271 PAAERSSSVGPGSS 230 +++ G++ Sbjct: 537 TTKSETTTSSDGTN 550
>YIHI_SHIFL (P0A8H7) UPF0241 protein yihI| Length = 169 Score = 29.6 bits (65), Expect = 8.7 Identities = 25/102 (24%), Positives = 41/102 (40%) Frame = -3 Query: 523 SNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESP 344 S A+ +K + LD R+ Q + +PGS + N TS +K +P Sbjct: 10 SKGHAKARRKTREELDQEARD-RKRQKKRRGHAPGSRAAGG-------NTTSGSKGQNAP 61 Query: 343 KSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGSSDVLE 218 K P + S+T V + H P +E+ ++LE Sbjct: 62 KDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLE 103
>YIHI_ECOLI (P0A8H6) UPF0241 protein yihI| Length = 169 Score = 29.6 bits (65), Expect = 8.7 Identities = 25/102 (24%), Positives = 41/102 (40%) Frame = -3 Query: 523 SNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKPSILPVNDTSKNKTPESP 344 S A+ +K + LD R+ Q + +PGS + N TS +K +P Sbjct: 10 SKGHAKARRKTREELDQEARD-RKRQKKRRGHAPGSRAAGG-------NTTSGSKGQNAP 61 Query: 343 KSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGPGSSDVLE 218 K P + S+T V + H P +E+ ++LE Sbjct: 62 KDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLE 103
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 391 ILPVNDTSKNKTP--ESPKSPAVSSRTYAATKNNVAVQEHHPPAAERSSSVGP 239 +LP T N P S K P+V R A ++VQ H P + + VGP Sbjct: 1095 VLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGP 1147
>NADE_BACAN (Q81RP3) NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)| Length = 272 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -3 Query: 661 AAMELRPDCGVNRTIIEKLSVKAPSAESKLKV-LKAIAHEYNLDWDSSNTEAEFNKKYED 485 A E+R + G I +L K E ++ L+ I + ++ +D ++T F+ +YE+ Sbjct: 62 AVEEIRNEGGNATFIAVRLPYKVQKDEDDAQLALQFIQADQSVAFDIASTVDAFSNQYEN 121 Query: 484 LLDDSGSSVRQG 449 LLD+S + +G Sbjct: 122 LLDESLTDFNKG 133
>ZN265_HUMAN (O95218) Zinc finger protein 265 (Zinc finger, splicing)| Length = 337 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Frame = -3 Query: 547 EYNLDWDSSNTEAEFNKKYEDLLDDSGSSVRQGQTPKIESSPGSSISRDKP-SILPVNDT 371 +YNLD ++ E + NKK + S S ++ SSP SS SR + S + Sbjct: 182 KYNLD---ASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQ 238 Query: 370 SKNKTPESPKSPAVSSRTYAATKNNVAVQEH 278 S++++ +S + S++ +++++ A+ H Sbjct: 239 SRSRSSSRERSRSRGSKSRSSSRSTGALLPH 269
>ATG18_NEUCR (Q96U88) Autophagy-related protein 18| Length = 461 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/79 (30%), Positives = 35/79 (44%) Frame = -1 Query: 555 LLMSTILIGIHLIPKQNSIRNTKICWTIPDHQSAKAKHLKLRALQALPFPEISHRFYLST 376 +L ST L+ + L P+Q I+NTK+ P + A L+L LP S L+ Sbjct: 50 MLFSTSLVALILTPRQLEIQNTKV--DQPSQRHCLASELRLMRRPILPTQRASVICELTF 107 Query: 375 TQAKIKLPSPRNHLL*VQE 319 A + + R L V E Sbjct: 108 PSAVLAVRLNRKRLAVVLE 126
>VHP1_CAEEL (Q10038) Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual| specificity phosphatase family protein 1) Length = 657 Score = 29.6 bits (65), Expect = 8.7 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Frame = -3 Query: 448 QTPKIESS----PGSSISRDKPSILPVNDTSKNKTPESPKSPAVSSRTYAATKNNVAVQE 281 + PK SS PGS+ PS V++ S PE+ S A SS T +A Sbjct: 346 KVPKSASSNCVFPGSTHDESSPSSPSVSEGSAASEPETSSSAASSSSTASA--------- 396 Query: 280 HHPPAAERSSSVGPGSSDV 224 PP+ +S G S V Sbjct: 397 --PPSMPSTSEQGTSSGTV 413 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,217,987 Number of Sequences: 219361 Number of extensions: 1841789 Number of successful extensions: 6056 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 5694 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6033 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
