ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14n09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464472.1| Oryza sativa (japonica cultivar-group), mRNA 438 e-120
2ref|XM_506747.1| PREDICTED Oryza sativa (japonica cultivar-group... 438 e-120
3dbj|AK105018.2| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-120
4dbj|AK099565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-120
5dbj|AK070521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-120
6gb|BT018049.1| Zea mays clone EL01N0531D09.c mRNA sequence 363 4e-97
7gb|AY108192.1| Zea mays PCO101856 mRNA sequence 315 9e-83
8gb|BT024096.1| Zea mays clone EL01N0527B08 mRNA sequence 285 8e-74
9gb|AY111753.1| Zea mays CL11375_2 mRNA sequence 226 6e-56
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
11dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
12dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
13gb|BC076381.1| Rattus norvegicus fumarylacetoacetate hydrolase, ... 72 2e-09
14ref|NM_017181.2| Rattus norvegicus fumarylacetoacetate hydrolase... 72 2e-09
15gb|M77694.1|RATFAH R.norvegicus fumarylacetoacetate hydrolase (F... 72 2e-09
16gb|BC010767.1| Mus musculus fumarylacetoacetate hydrolase, mRNA ... 66 1e-07
17gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome... 66 1e-07
18gb|AC129605.4| Mus musculus BAC clone RP23-121N17 from chromosom... 66 1e-07
19emb|Z11774.1|MMFLCTAT M.musculus mRNA for fumarylacetoacetase 66 1e-07
20ref|NM_010176.1| Mus musculus fumarylacetoacetate hydrolase (Fah... 66 1e-07
21dbj|AK143759.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 66 1e-07
22dbj|AK158808.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 66 1e-07
23gb|M84145.1|MUSFAH Mouse fumarylacetoacetate hydrolase (Fah) mRN... 66 1e-07
24gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 44 0.51
25gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Ca... 42 2.0
26emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in ... 42 2.0
27emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in... 42 2.0
28ref|NM_101077.4| Arabidopsis thaliana catalytic/ fumarylacetoace... 40 8.0
29gb|AY126660.1| Canis lupus MHC class II antigen (Calu-DRB1) gene... 40 8.0
30gb|AY126652.1| Canis lupus MHC class II antigen (Calu-DQB1) gene... 40 8.0
31gb|AY126650.1| Canis lupus MHC class II antigen (DLA-DQB1) gene,... 40 8.0
32gb|DQ499153.1| Canis familiaris MHC class II antigen (DLA-DQB1) ... 40 8.0
33gb|U40959.1| Caenorhabditis elegans cosmid B0310, complete sequence 40 8.0
34emb|AL390718.11| Human DNA sequence from clone RP11-502H18 on ch... 40 8.0
35gb|AF516923.1| Canis latrans MHC class II histocompatibility ant... 40 8.0
36gb|AF516916.1| Canis rufus MHC class II histocompatibility antig... 40 8.0
37gb|AY009512.1| Canis rufus MHC Class II antigen (Caru-DRB) gene,... 40 8.0
38gb|AY009511.1| Canis lupus MHC Class II antigen (Calu-DRB) gene,... 40 8.0
39gb|AY009510.1| Canis lupus MHC Class II antigen (Calu-DRB) gene,... 40 8.0
40emb|AJ316223.1|CFA316223 Canis lupus partial DLA-DQB1 gene for M... 40 8.0
41emb|AJ311095.1|CFA311095 Canis familiaris partial DLA-DRB1 gene ... 40 8.0
42gb|AC153550.10| Mus musculus 10 BAC RP23-250H23 (Roswell Park Ca... 40 8.0
43gb|DQ415890.1| Canis familiaris MHC class II antigen (DLA-DQB1) ... 40 8.0
44dbj|AB223280.1| Aspergillus oryzae cDNA, contig sequence: AoEST0111 40 8.0
45dbj|AB223182.1| Aspergillus oryzae cDNA, contig sequence: AoEST0013 40 8.0
46gb|AY094010.1| Arabidopsis thaliana At1g12050/F12F1_8 mRNA, comp... 40 8.0
47dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 8.0
48gb|AC097494.3| Homo sapiens BAC clone RP11-273B19 from 4, comple... 40 8.0
49gb|AY074575.1| Arabidopsis thaliana 40 8.0
50gb|AC023533.6| Homo sapiens chromosome 8, clone RP11-288G19, com... 40 8.0
51gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, com... 40 8.0
52gb|AC022639.7| Homo sapiens, clone RP11-27K19, complete sequence 40 8.0
53gb|S76138.1| DLA-DRB1 (DLA-DRB1-Dw3)=leucocyte antigen class II ... 40 8.0
54ref|NM_001023398.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.0
55gb|AF336108.1|AF336108 Canis lupus MHC class II antigen beta cha... 40 8.0
56emb|BX817509.1|CNS0AE5N Arabidopsis thaliana Full-length cDNA Co... 40 8.0
57gb|AF343741.1|AF343741 Canis familiaris MHC class II antigen bet... 40 8.0
58gb|AF343740.1|AF343740 Canis lupus MHC class II antigen beta cha... 40 8.0
59gb|AF343732.1|AF343732 Canis lupus MHC class II antigen beta cha... 40 8.0
60gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Can... 40 8.0
61gb|AY220508.1| Canis familiaris MHC class II antigen beta chain ... 40 8.0
62gb|AY220507.1| Canis familiaris MHC class II antigen beta chain ... 40 8.0
63gb|AF113704.1|AF113704 Canis familiaris MHC class II antigen DLA... 40 8.0
64gb|AF113705.1|AF113705 Canis familiaris MHC class II antigen DLA... 40 8.0
65gb|AY009941.1| Canis familiaris MHC class II antigen beta chain ... 40 8.0
66gb|AC154022.2| Mus musculus 6 BAC RP24-402L3 (Roswell Park Cance... 40 8.0
67ref|NM_001014768.1| Canis familiaris MHC class II DLA DRB1 beta ... 40 8.0
68emb|AL031538.1|SPCC1906 S.pombe chromosome III cosmid c1906 40 8.0
69gb|AF043165.1|AF043165 Canis familiaris MHC class II DLA-DQ beta... 40 8.0
70gb|AF043164.1|AF043164 Canis familiaris MHC class II DLA-DQ beta... 40 8.0
71gb|AF043161.1|AF043161 Canis familiaris MHC class II DLA-DQ beta... 40 8.0
72gb|AF043160.1|AF043160 Canis familiaris MHC class II DLA-DQ beta... 40 8.0
73gb|AF043156.1|AF043156 Canis familiaris MHC class II DLA-DQ beta... 40 8.0
74gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 ... 40 8.0
75gb|AF061039.1|AF061039 Canis familiaris MHC class II antigen bet... 40 8.0
76emb|AM084382.1| Canis familiaris partial DLA-DRB1 gene for MHC c... 40 8.0
77emb|AM076471.1| Canis familiaris partial DLA-DRB1 gene for MHC c... 40 8.0
78emb|AM076470.1| Canis familiaris partial DLA-DRB1 gene for MHC c... 40 8.0
79gb|U58685.1|CFU58685 Canis familiaris MHC Class II DLA DRBB1 bet... 40 8.0
80gb|M30129.1|DOGMHCDOBA Dog MHC class II DLA beta chain variable ... 40 8.0
81gb|M30132.1|DOGMHC3LAB Dog MHC class II DLA beta chain variable ... 40 8.0
82emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chr... 40 8.0
83emb|AJ012456.1|CFA012456 Canis Familiaris DLA-DRB1 gene, DRB1*08... 40 8.0
84emb|AJ012455.1|CFA012455 Canis Familiaris DLA-DRB1 gene, DRB1*29... 40 8.0
85gb|M29611.1|DOGMHDRBA C.familiaris MHC class II DLA-DR-beta-1 ge... 40 8.0
86gb|M57529.1|DOGMHCDW4 Canine MHC class II DLA-DRB mRNA (Dw4), pa... 40 8.0
87gb|M57535.1|DOGMHCD8 Canine MHC class II DLA-DRB mRNA (D8), part... 40 8.0
88dbj|D89232.1| Schizosaccharomyces pombe mRNA, partial cds, clone... 40 8.0
89dbj|AB045893.1| Nepenthes alata NaAP3 mRNA for aspartic proteina... 40 8.0 
>ref|XM_464472.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1613

 Score =  438 bits (221), Expect = e-120
 Identities = 365/413 (88%)
 Strand = Plus / Minus

                                                                        
Query: 173  cttcccggtgcaggttccgaatccgacgttgtagtcctcgcccttgcaacaagctgtcaa 232
            |||||| |||||||||||||||||||| |||||| | || ||||||||||||||||||||
Sbjct: 1386 cttcccagtgcaggttccgaatccgacattgtagccttcacccttgcaacaagctgtcaa 1327

                                                                        
Query: 233  gatgacttcatccccatcttggaggaacttgcgggtcgaattcccaactgatatctcctt 292
            |||||| |||||||||||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 1326 gatgacctcatccccatcttctaggaacttgcgggtcgagtttccaactgatatctcctt 1267

                                                                        
Query: 293  ctgcccgttccacgttatctccagcaagcatcccaaagagtccggttcaggtccactgag 352
            |||||| ||||| |||| ||||||||| ||||||||||| || |  |||||||| || ||
Sbjct: 1266 ctgcccattccatgttagctccagcaaacatcccaaagattctgtctcaggtccgcttag 1207

                                                                        
Query: 353  ggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaacagtgtggtgtgc 412
             |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 tgtgccagttgcaaacatatcccctggtctcagattgcatccattaacagtgtggtgtgc 1147

                                                                        
Query: 413  tagttgctgcgtcacagtccagtacatatgtttgaaattggtctttgtgacaattgatgc 472
            ||||||||| || | |||||| |||| ||| ||||| ||  ||||||  || ||||||| 
Sbjct: 1146 tagttgctgtgttaaagtccaatacagatgcttgaagttactctttgcaaccattgatgg 1087

                                                                        
Query: 473  gtcactttgttctttgggcttaatccaagcttcaagaggaatatcatagtttatgtgatc 532
             |||||||| || ||||||||||||||  | |||||||||||||| ||||||| ||| | 
Sbjct: 1086 ttcactttgctccttgggcttaatccagacctcaagaggaatatcgtagtttacgtggtt 1027

                                                                 
Query: 533  cttttcagctaagtaaggcaaaggctcaggttcctgcttaggagcctcacagg 585
            |||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1026 cttttcagctaagtaaggcaaaggttcaggttcctgcttaggagcttcacagg 974
to top
>ref|XM_506747.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.17 mRNA
          Length = 1619

 Score =  438 bits (221), Expect = e-120
 Identities = 365/413 (88%)
 Strand = Plus / Minus

                                                                        
Query: 173  cttcccggtgcaggttccgaatccgacgttgtagtcctcgcccttgcaacaagctgtcaa 232
            |||||| |||||||||||||||||||| |||||| | || ||||||||||||||||||||
Sbjct: 1389 cttcccagtgcaggttccgaatccgacattgtagccttcacccttgcaacaagctgtcaa 1330

                                                                        
Query: 233  gatgacttcatccccatcttggaggaacttgcgggtcgaattcccaactgatatctcctt 292
            |||||| |||||||||||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 1329 gatgacctcatccccatcttctaggaacttgcgggtcgagtttccaactgatatctcctt 1270

                                                                        
Query: 293  ctgcccgttccacgttatctccagcaagcatcccaaagagtccggttcaggtccactgag 352
            |||||| ||||| |||| ||||||||| ||||||||||| || |  |||||||| || ||
Sbjct: 1269 ctgcccattccatgttagctccagcaaacatcccaaagattctgtctcaggtccgcttag 1210

                                                                        
Query: 353  ggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaacagtgtggtgtgc 412
             |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 tgtgccagttgcaaacatatcccctggtctcagattgcatccattaacagtgtggtgtgc 1150

                                                                        
Query: 413  tagttgctgcgtcacagtccagtacatatgtttgaaattggtctttgtgacaattgatgc 472
            ||||||||| || | |||||| |||| ||| ||||| ||  ||||||  || ||||||| 
Sbjct: 1149 tagttgctgtgttaaagtccaatacagatgcttgaagttactctttgcaaccattgatgg 1090

                                                                        
Query: 473  gtcactttgttctttgggcttaatccaagcttcaagaggaatatcatagtttatgtgatc 532
             |||||||| || ||||||||||||||  | |||||||||||||| ||||||| ||| | 
Sbjct: 1089 ttcactttgctccttgggcttaatccagacctcaagaggaatatcgtagtttacgtggtt 1030

                                                                 
Query: 533  cttttcagctaagtaaggcaaaggctcaggttcctgcttaggagcctcacagg 585
            |||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1029 cttttcagctaagtaaggcaaaggttcaggttcctgcttaggagcttcacagg 977
to top
>dbj|AK105018.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D02, full
            insert sequence
          Length = 1609

 Score =  438 bits (221), Expect = e-120
 Identities = 365/413 (88%)
 Strand = Plus / Minus

                                                                        
Query: 173  cttcccggtgcaggttccgaatccgacgttgtagtcctcgcccttgcaacaagctgtcaa 232
            |||||| |||||||||||||||||||| |||||| | || ||||||||||||||||||||
Sbjct: 1384 cttcccagtgcaggttccgaatccgacattgtagccttcacccttgcaacaagctgtcaa 1325

                                                                        
Query: 233  gatgacttcatccccatcttggaggaacttgcgggtcgaattcccaactgatatctcctt 292
            |||||| |||||||||||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 1324 gatgacctcatccccatcttctaggaacttgcgggtcgagtttccaactgatatctcctt 1265

                                                                        
Query: 293  ctgcccgttccacgttatctccagcaagcatcccaaagagtccggttcaggtccactgag 352
            |||||| ||||| |||| ||||||||| ||||||||||| || |  |||||||| || ||
Sbjct: 1264 ctgcccattccatgttagctccagcaaacatcccaaagattctgtctcaggtccgcttag 1205

                                                                        
Query: 353  ggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaacagtgtggtgtgc 412
             |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgtgccagttgcaaacatatcccctggtctcagattgcatccattaacagtgtggtgtgc 1145

                                                                        
Query: 413  tagttgctgcgtcacagtccagtacatatgtttgaaattggtctttgtgacaattgatgc 472
            ||||||||| || | |||||| |||| ||| ||||| ||  ||||||  || ||||||| 
Sbjct: 1144 tagttgctgtgttaaagtccaatacagatgcttgaagttactctttgcaaccattgatgg 1085

                                                                        
Query: 473  gtcactttgttctttgggcttaatccaagcttcaagaggaatatcatagtttatgtgatc 532
             |||||||| || ||||||||||||||  | |||||||||||||| ||||||| ||| | 
Sbjct: 1084 ttcactttgctccttgggcttaatccagacctcaagaggaatatcgtagtttacgtggtt 1025

                                                                 
Query: 533  cttttcagctaagtaaggcaaaggctcaggttcctgcttaggagcctcacagg 585
            |||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1024 cttttcagctaagtaaggcaaaggttcaggttcctgcttaggagcttcacagg 972
to top
>dbj|AK099565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M07, full
           insert sequence
          Length = 1177

 Score =  438 bits (221), Expect = e-120
 Identities = 365/413 (88%)
 Strand = Plus / Minus

                                                                       
Query: 173 cttcccggtgcaggttccgaatccgacgttgtagtcctcgcccttgcaacaagctgtcaa 232
           |||||| |||||||||||||||||||| |||||| | || ||||||||||||||||||||
Sbjct: 907 cttcccagtgcaggttccgaatccgacattgtagccttcacccttgcaacaagctgtcaa 848

                                                                       
Query: 233 gatgacttcatccccatcttggaggaacttgcgggtcgaattcccaactgatatctcctt 292
           |||||| |||||||||||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 847 gatgacctcatccccatcttctaggaacttgcgggtcgagtttccaactgatatctcctt 788

                                                                       
Query: 293 ctgcccgttccacgttatctccagcaagcatcccaaagagtccggttcaggtccactgag 352
           |||||| ||||| |||| ||||||||| ||||||||||| || |  |||||||| || ||
Sbjct: 787 ctgcccattccatgttagctccagcaaacatcccaaagattctgtctcaggtccgcttag 728

                                                                       
Query: 353 ggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaacagtgtggtgtgc 412
            |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tgtgccagttgcaaacatatcccctggtctcagattgcatccattaacagtgtggtgtgc 668

                                                                       
Query: 413 tagttgctgcgtcacagtccagtacatatgtttgaaattggtctttgtgacaattgatgc 472
           ||||||||| || | |||||| |||| ||| ||||| ||  ||||||  || ||||||| 
Sbjct: 667 tagttgctgtgttaaagtccaatacagatgcttgaagttactctttgcaaccattgatgg 608

                                                                       
Query: 473 gtcactttgttctttgggcttaatccaagcttcaagaggaatatcatagtttatgtgatc 532
            |||||||| || ||||||||||||||  | |||||||||||||| ||||||| ||| | 
Sbjct: 607 ttcactttgctccttgggcttaatccagacctcaagaggaatatcgtagtttacgtggtt 548

                                                                
Query: 533 cttttcagctaagtaaggcaaaggctcaggttcctgcttaggagcctcacagg 585
           |||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 547 cttttcagctaagtaaggcaaaggttcaggttcctgcttaggagcttcacagg 495
to top
>dbj|AK070521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055F19, full
            insert sequence
          Length = 1619

 Score =  438 bits (221), Expect = e-120
 Identities = 365/413 (88%)
 Strand = Plus / Minus

                                                                        
Query: 173  cttcccggtgcaggttccgaatccgacgttgtagtcctcgcccttgcaacaagctgtcaa 232
            |||||| |||||||||||||||||||| |||||| | || ||||||||||||||||||||
Sbjct: 1389 cttcccagtgcaggttccgaatccgacattgtagccttcacccttgcaacaagctgtcaa 1330

                                                                        
Query: 233  gatgacttcatccccatcttggaggaacttgcgggtcgaattcccaactgatatctcctt 292
            |||||| |||||||||||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 1329 gatgacctcatccccatcttctaggaacttgcgggtcgagtttccaactgatatctcctt 1270

                                                                        
Query: 293  ctgcccgttccacgttatctccagcaagcatcccaaagagtccggttcaggtccactgag 352
            |||||| ||||| |||| ||||||||| ||||||||||| || |  |||||||| || ||
Sbjct: 1269 ctgcccattccatgttagctccagcaaacatcccaaagattctgtctcaggtccgcttag 1210

                                                                        
Query: 353  ggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaacagtgtggtgtgc 412
             |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 tgtgccagttgcaaacatatcccctggtctcagattgcatccattaacagtgtggtgtgc 1150

                                                                        
Query: 413  tagttgctgcgtcacagtccagtacatatgtttgaaattggtctttgtgacaattgatgc 472
            ||||||||| || | |||||| |||| ||| ||||| ||  ||||||  || ||||||| 
Sbjct: 1149 tagttgctgtgttaaagtccaatacagatgcttgaagttactctttgcaaccattgatgg 1090

                                                                        
Query: 473  gtcactttgttctttgggcttaatccaagcttcaagaggaatatcatagtttatgtgatc 532
             |||||||| || ||||||||||||||  | |||||||||||||| ||||||| ||| | 
Sbjct: 1089 ttcactttgctccttgggcttaatccagacctcaagaggaatatcgtagtttacgtggtt 1030

                                                                 
Query: 533  cttttcagctaagtaaggcaaaggctcaggttcctgcttaggagcctcacagg 585
            |||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1029 cttttcagctaagtaaggcaaaggttcaggttcctgcttaggagcttcacagg 977
to top
>gb|BT018049.1| Zea mays clone EL01N0531D09.c mRNA sequence
          Length = 872

 Score =  363 bits (183), Expect = 4e-97
 Identities = 375/439 (85%)
 Strand = Plus / Minus

                                                                       
Query: 145 tgttggctcatggcagtgacggcacgatcttcccggtgcaggttccgaatccgacgttgt 204
           |||||||||| || |||| |||||  | |||||||||||||||||| || || | |||||
Sbjct: 559 tgttggctcagggaagtgccggcagaaccttcccggtgcaggttccaaaaccaatgttgt 500

                                                                       
Query: 205 agtcctcgcccttgcaacaagctgtcaagatgacttcatccccatcttggaggaacttgc 264
           || |||| |||||||||||  ||||||||||||||||||| |||||||  ||||||||||
Sbjct: 499 agccctcacccttgcaacatcctgtcaagatgacttcatctccatcttctaggaacttgc 440

                                                                       
Query: 265 gggtcgaattcccaactgatatctccttctgcccgttccacgttatctccagcaagcatc 324
           ||||| ||||||| || | ||||||||||||||||||||| || | ||||||||  || |
Sbjct: 439 gggtcaaattccccaccggtatctccttctgcccgttccatgtcagctccagcagacacc 380

                                                                       
Query: 325 ccaaagagtccggttcaggtccactgagggtgccagtcgcaaacatgtcccctggtctca 384
           | |  |||||||||||||||||||| || |||||||||||||| || ||||| || ||||
Sbjct: 379 cgagcgagtccggttcaggtccactcagtgtgccagtcgcaaatatatcccccggcctca 320

                                                                       
Query: 385 gattgcatccattaacagtgtggtgtgctagttgctgcgtcacagtccagtacatatgtt 444
             |||||||| || |  |||||||||||||| ||||| ||||  ||||| |||| ||| |
Sbjct: 319 tgttgcatccgttgatggtgtggtgtgctagctgctgtgtcagcgtccaatacagatgct 260

                                                                       
Query: 445 tgaaattggtctttgtgacaattgatgcgtcactttgttctttgggcttaatccaagctt 504
           ||||||| || ||||||||||||||||||||| |||| ||||| |||||||||||  |||
Sbjct: 259 tgaaattagtttttgtgacaattgatgcgtcattttgatctttcggcttaatccagactt 200

                                                                       
Query: 505 caagaggaatatcatagtttatgtgatccttttcagctaagtaaggcaaaggctcaggtt 564
           |||||||||| ||||| |||||||||| |||||| |||||||| || |||||||| ||||
Sbjct: 199 caagaggaatgtcataatttatgtgattcttttcggctaagtacggtaaaggctcgggtt 140

                              
Query: 565 cctgcttaggagcctcaca 583
           ||||||||||||| |||||
Sbjct: 139 cctgcttaggagcatcaca 121
to top
>gb|AY108192.1| Zea mays PCO101856 mRNA sequence
          Length = 1637

 Score =  315 bits (159), Expect = 9e-83
 Identities = 369/439 (84%)
 Strand = Plus / Minus

                                                                        
Query: 145  tgttggctcatggcagtgacggcacgatcttcccggtgcaggttccgaatccgacgttgt 204
            |||||||||| || |||| ||||| || |||||| ||||| ||||| || || | |||||
Sbjct: 1428 tgttggctcagggaagtgccggcaggaccttcccagtgcaagttccaaaaccaatgttgt 1369

                                                                        
Query: 205  agtcctcgcccttgcaacaagctgtcaagatgacttcatccccatcttggaggaacttgc 264
            || | || |||||||| ||  ||||||||||||| ||||| |||||||  || |||||||
Sbjct: 1368 agccttcacccttgcagcatcctgtcaagatgacctcatctccatcttctagaaacttgc 1309

                                                                        
Query: 265  gggtcgaattcccaactgatatctccttctgcccgttccacgttatctccagcaagcatc 324
            ||||| |||| || |||| ||||||||||||||||||||| |||| |||||  |  ||||
Sbjct: 1308 gggtcaaattgcccactggtatctccttctgcccgttccatgttagctccaatagacatc 1249

                                                                        
Query: 325  ccaaagagtccggttcaggtccactgagggtgccagtcgcaaacatgtcccctggtctca 384
            | |  ||||||||||||||||||||||| |||||||| ||||| || ||||| || ||||
Sbjct: 1248 cgagggagtccggttcaggtccactgagtgtgccagttgcaaatatatcccccggcctca 1189

                                                                        
Query: 385  gattgcatccattaacagtgtggtgtgctagttgctgcgtcacagtccagtacatatgtt 444
              ||||||||||| | ||||||||||| ||| ||||||||||| ||||| |||| ||| |
Sbjct: 1188 tgttgcatccattgatagtgtggtgtgttagctgctgcgtcaccgtccaatacagatgct 1129

                                                                        
Query: 445  tgaaattggtctttgtgacaattgatgcgtcactttgttctttgggcttaatccaagctt 504
            ||||||| || ||||||||||||  |||  || |||| ||||| ||||||||| |  |||
Sbjct: 1128 tgaaattagtttttgtgacaattagtgcaacattttgatctttaggcttaatcaagactt 1069

                                                                        
Query: 505  caagaggaatatcatagtttatgtgatccttttcagctaagtaaggcaaaggctcaggtt 564
            |||||||||| |||||||||||||||| ||||||||||| ||| || ||||| || ||||
Sbjct: 1068 caagaggaatgtcatagtttatgtgattcttttcagctaggtatggtaaaggttcgggtt 1009

                               
Query: 565  cctgcttaggagcctcaca 583
            |||||||||||||||||||
Sbjct: 1008 cctgcttaggagcctcaca 990
to top
>gb|BT024096.1| Zea mays clone EL01N0527B08 mRNA sequence
          Length = 1600

 Score =  285 bits (144), Expect = 8e-74
 Identities = 324/384 (84%)
 Strand = Plus / Minus

                                                                        
Query: 200  gttgtagtcctcgcccttgcaacaagctgtcaagatgacttcatccccatcttggaggaa 259
            ||||||| | || |||||||| ||  ||||||||||||| ||||| |||||||  |  ||
Sbjct: 1374 gttgtagccttcacccttgcagcatcctgtcaagatgacctcatctccatcttctaaaaa 1315

                                                                        
Query: 260  cttgcgggtcgaattcccaactgatatctccttctgcccgttccacgttatctccagcaa 319
            |||||||||| |||| || |||| ||||||||||||||||||||| |||| |||||  | 
Sbjct: 1314 cttgcgggtcaaattgcccactggtatctccttctgcccgttccatgttagctccaatag 1255

                                                                        
Query: 320  gcatcccaaagagtccggttcaggtccactgagggtgccagtcgcaaacatgtcccctgg 379
             ||||| |  ||||||||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct: 1254 acatccgagggagtccggttcaggtccactgagtgtgccagttgcaaatatatcccccgg 1195

                                                                        
Query: 380  tctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagtccagtacat 439
             ||||  ||||||||||| | ||||||||||| ||| ||||||||||| ||||| |||| 
Sbjct: 1194 cctcatgttgcatccattgatagtgtggtgtgttagctgctgcgtcaccgtccaatacag 1135

                                                                        
Query: 440  atgtttgaaattggtctttgtgacaattgatgcgtcactttgttctttgggcttaatcca 499
            ||| |||||||| || ||||||||||||  |||  || |||| ||||| ||||||||| |
Sbjct: 1134 atgcttgaaattagtttttgtgacaattagtgcaacattttgatctttaggcttaatcaa 1075

                                                                        
Query: 500  agcttcaagaggaatatcatagtttatgtgatccttttcagctaagtaaggcaaaggctc 559
              ||||||||||||| |||||||||||||||| ||||||||||| ||| || ||||| ||
Sbjct: 1074 gacttcaagaggaatgtcatagtttatgtgattcttttcagctaggtatggtaaaggttc 1015

                                    
Query: 560  aggttcctgcttaggagcctcaca 583
             |||||||||||||||||||||||
Sbjct: 1014 gggttcctgcttaggagcctcaca 991
to top
>gb|AY111753.1| Zea mays CL11375_2 mRNA sequence
          Length = 644

 Score =  226 bits (114), Expect = 6e-56
 Identities = 317/388 (81%)
 Strand = Plus / Plus

                                                                       
Query: 145 tgttggctcatggcagtgacggcacgatcttcccggtgcaggttccgaatccgacgttgt 204
           |||||||||| || |||| |||||  | |||||||||||||||||| || || | |||||
Sbjct: 248 tgttggctcagggaagtgccggcagaaccttcccggtgcaggttccaaaaccaatgttgt 307

                                                                       
Query: 205 agtcctcgcccttgcaacaagctgtcaagatgacttcatccccatcttggaggaacttgc 264
           || | || |||||||||||  ||||||||||||||||||| |||||||  ||||||||||
Sbjct: 308 agccttcacccttgcaacatcctgtcaagatgacttcatctccatcttctaggaacttgc 367

                                                                       
Query: 265 gggtcgaattcccaactgatatctccttctgcccgttccacgttatctccagcaagcatc 324
           ||||| ||||||| || | ||||||||||||||||||||| || | ||||||||  || |
Sbjct: 368 gggtcaaattccccaccggtatctccttctgcccgttccatgtcagctccagcagacacc 427

                                                                       
Query: 325 ccaaagagtccggttcaggtccactgagggtgccagtcgcaaacatgtcccctggtctca 384
           | |  |||||||||||||||||||| || |||||||||||||| || |     || ||||
Sbjct: 428 cgagggagtccggttcaggtccactcagtgtgccagtcgcaaatatatnnnnnggcctca 487

                                                                       
Query: 385 gattgcatccattaacagtgtggtgtgctagttgctgcgtcacagtccagtacatatgtt 444
             |||||||| || |  |||||||||||||| ||||| ||||  ||||| |||| ||| |
Sbjct: 488 tgttgcatccgttgatggtgtggtgtgctagctgctgtgtcagcgtccaatacagatgct 547

                                                                       
Query: 445 tgaaattggtctttgtgacaattgatgcgtcactttgttctttgggcttaatccaagctt 504
           ||||||| |     |||||||||  |||  || |||| ||||| ||||||||| |  |||
Sbjct: 548 tgaaattagnnnnngtgacaattagtgcaacattttgatctttcggcttaatcaagactt 607

                                       
Query: 505 caagaggaatatcatagtttatgtgatc 532
           |||||||||| |||||||||||||||||
Sbjct: 608 caagaggaatgtcatagtttatgtgatc 635
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                           
Query: 214     ccttgcaacaagctgtcaagatgacttcatccccatcttggaggaacttgcgggtcgaat 273
               ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |
Sbjct: 5415397 ccttgcaacaagctgtcaagatgacctcatccccatcttctaggaacttgcgggtcgagt 5415456

                                                                         
Query: 274     tcccaactgatatctccttctgcccgttccacgttatctccagcaagcatcccaaaga 331
               | ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||
Sbjct: 5415457 ttccaactgatatctccttctgcccattccatgttagctccagcaaacatcccaaaga 5415514



 Score =  123 bits (62), Expect = 7e-25
 Identities = 77/82 (93%)
 Strand = Plus / Plus

                                                                           
Query: 340     caggtccactgagggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaa 399
               ||||||| || || |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 5415613 caggtccgcttagtgtgccagttgcaaacatatcccctggtctcagattgcatccattaa 5415672

                                     
Query: 400     cagtgtggtgtgctagttgctg 421
               ||||||||||||||||||||||
Sbjct: 5415673 cagtgtggtgtgctagttgctg 5415694



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                           
Query: 504     tcaagaggaatatcatagtttatgtgatccttttcagctaagtaaggcaaaggctcaggt 563
               |||||||||||||| ||||||| ||| | |||||||||||||||||||||||| ||||||
Sbjct: 5415965 tcaagaggaatatcgtagtttacgtggttcttttcagctaagtaaggcaaaggttcaggt 5416024

                     
Query: 564     tcctgc 569
               ||||||
Sbjct: 5416025 tcctgc 5416030



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                 
Query: 173     cttcccggtgcaggttccgaatccgacgttgtag 206
               |||||| |||||||||||||||||||| ||||||
Sbjct: 5415239 cttcccagtgcaggttccgaatccgacattgtag 5415272
to top
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1524_D08
          Length = 143046

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                         
Query: 214   ccttgcaacaagctgtcaagatgacttcatccccatcttggaggaacttgcgggtcgaat 273
             ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |
Sbjct: 68978 ccttgcaacaagctgtcaagatgacctcatccccatcttctaggaacttgcgggtcgagt 69037

                                                                       
Query: 274   tcccaactgatatctccttctgcccgttccacgttatctccagcaagcatcccaaaga 331
             | ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||
Sbjct: 69038 ttccaactgatatctccttctgcccattccatgttagctccagcaaacatcccaaaga 69095



 Score =  123 bits (62), Expect = 7e-25
 Identities = 77/82 (93%)
 Strand = Plus / Plus

                                                                         
Query: 340   caggtccactgagggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaa 399
             ||||||| || || |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 69194 caggtccgcttagtgtgccagttgcaaacatatcccctggtctcagattgcatccattaa 69253

                                   
Query: 400   cagtgtggtgtgctagttgctg 421
             ||||||||||||||||||||||
Sbjct: 69254 cagtgtggtgtgctagttgctg 69275



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                         
Query: 504   tcaagaggaatatcatagtttatgtgatccttttcagctaagtaaggcaaaggctcaggt 563
             |||||||||||||| ||||||| ||| | |||||||||||||||||||||||| ||||||
Sbjct: 69546 tcaagaggaatatcgtagtttacgtggttcttttcagctaagtaaggcaaaggttcaggt 69605

                   
Query: 564   tcctgc 569
             ||||||
Sbjct: 69606 tcctgc 69611



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 173   cttcccggtgcaggttccgaatccgacgttgtag 206
             |||||| |||||||||||||||||||| ||||||
Sbjct: 68820 cttcccagtgcaggttccgaatccgacattgtag 68853
to top
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1225_F07
          Length = 142772

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                          
Query: 214    ccttgcaacaagctgtcaagatgacttcatccccatcttggaggaacttgcgggtcgaat 273
              ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |
Sbjct: 141700 ccttgcaacaagctgtcaagatgacctcatccccatcttctaggaacttgcgggtcgagt 141759

                                                                        
Query: 274    tcccaactgatatctccttctgcccgttccacgttatctccagcaagcatcccaaaga 331
              | ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||
Sbjct: 141760 ttccaactgatatctccttctgcccattccatgttagctccagcaaacatcccaaaga 141817



 Score =  123 bits (62), Expect = 7e-25
 Identities = 77/82 (93%)
 Strand = Plus / Plus

                                                                          
Query: 340    caggtccactgagggtgccagtcgcaaacatgtcccctggtctcagattgcatccattaa 399
              ||||||| || || |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 141916 caggtccgcttagtgtgccagttgcaaacatatcccctggtctcagattgcatccattaa 141975

                                    
Query: 400    cagtgtggtgtgctagttgctg 421
              ||||||||||||||||||||||
Sbjct: 141976 cagtgtggtgtgctagttgctg 141997



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                          
Query: 504    tcaagaggaatatcatagtttatgtgatccttttcagctaagtaaggcaaaggctcaggt 563
              |||||||||||||| ||||||| ||| | |||||||||||||||||||||||| ||||||
Sbjct: 142268 tcaagaggaatatcgtagtttacgtggttcttttcagctaagtaaggcaaaggttcaggt 142327

                    
Query: 564    tcctgc 569
              ||||||
Sbjct: 142328 tcctgc 142333



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 173    cttcccggtgcaggttccgaatccgacgttgtag 206
              |||||| |||||||||||||||||||| ||||||
Sbjct: 141542 cttcccagtgcaggttccgaatccgacattgtag 141575
to top
>gb|BC076381.1| Rattus norvegicus fumarylacetoacetate hydrolase, mRNA (cDNA clone
            MGC:93536 IMAGE:7108528), complete cds
          Length = 1493

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgc 422
            |||||| ||||||||||||||||||||||||| ||||||||  |||||||||
Sbjct: 1132 gtccccaggtctcagattgcatccattaacagagtggtgtgtcagttgctgc 1081
to top
>ref|NM_017181.2| Rattus norvegicus fumarylacetoacetate hydrolase (Fah), mRNA
          Length = 1493

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgc 422
            |||||| ||||||||||||||||||||||||| ||||||||  |||||||||
Sbjct: 1132 gtccccaggtctcagattgcatccattaacagagtggtgtgtcagttgctgc 1081
to top
>gb|M77694.1|RATFAH R.norvegicus fumarylacetoacetate hydrolase (FAH) mRNA, complete cds
          Length = 1386

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgc 422
            |||||| ||||||||||||||||||||||||| ||||||||  |||||||||
Sbjct: 1054 gtccccaggtctcagattgcatccattaacagagtggtgtgtcagttgctgc 1003
to top
>gb|BC010767.1| Mus musculus fumarylacetoacetate hydrolase, mRNA (cDNA clone
            MGC:18569 IMAGE:4242421), complete cds
          Length = 1373

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
            |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 1036 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 977

                     
Query: 431  ccagtacat 439
            |||||||||
Sbjct: 976  ccagtacat 968
to top
>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence
          Length = 193890

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 371   gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
             |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 39657 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 39716

                      
Query: 431   ccagtacat 439
             |||||||||
Sbjct: 39717 ccagtacat 39725
to top
>gb|AC129605.4| Mus musculus BAC clone RP23-121N17 from chromosome 7, complete sequence
          Length = 232568

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                          
Query: 371    gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
              |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 217608 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 217667

                       
Query: 431    ccagtacat 439
              |||||||||
Sbjct: 217668 ccagtacat 217676
to top
>emb|Z11774.1|MMFLCTAT M.musculus mRNA for fumarylacetoacetase
          Length = 1398

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
            |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 1063 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 1004

                     
Query: 431  ccagtacat 439
            |||||||||
Sbjct: 1003 ccagtacat 995
to top
>ref|NM_010176.1| Mus musculus fumarylacetoacetate hydrolase (Fah), mRNA
          Length = 1398

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
            |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 1063 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 1004

                     
Query: 431  ccagtacat 439
            |||||||||
Sbjct: 1003 ccagtacat 995
to top
>dbj|AK143759.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
            library, clone:F430103D22 product:fumarylacetoacetate
            hydrolase, full insert sequence
          Length = 1398

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
            |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 1080 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 1021

                     
Query: 431  ccagtacat 439
            |||||||||
Sbjct: 1020 ccagtacat 1012
to top
>dbj|AK158808.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library,
            clone:K430330E02 product:fumarylacetoacetate hydrolase,
            full insert sequence
          Length = 1464

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
            |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 1137 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 1078

                     
Query: 431  ccagtacat 439
            |||||||||
Sbjct: 1077 ccagtacat 1069
to top
>gb|M84145.1|MUSFAH Mouse fumarylacetoacetate hydrolase (Fah) mRNA, complete cds
          Length = 1405

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 371  gtcccctggtctcagattgcatccattaacagtgtggtgtgctagttgctgcgtcacagt 430
            |||||| |||||||| |||||||||||||||| ||||||||  |||||||||  ||  ||
Sbjct: 1077 gtccccaggtctcaggttgcatccattaacagagtggtgtgtgagttgctgcagcatggt 1018

                     
Query: 431  ccagtacat 439
            |||||||||
Sbjct: 1017 ccagtacat 1009
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 414    agttgctgcgtcacagtccagtacatatgtttgaaattggtc 455
              |||||||||| ||  ||||||||||| |||||||| ||||||
Sbjct: 628289 agttgctgcgccatcgtccagtacatgtgtttgaagttggtc 628248
to top
>gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156390

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 509   aggaatatcatagtttatgtgatcc 533
             |||| ||||||||||||||||||||
Sbjct: 72521 aggactatcatagtttatgtgatcc 72545
to top
>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10,
             complete sequence
          Length = 272498

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 517   catagtttatgtgatcctttt 537
             |||||||||||||||||||||
Sbjct: 81032 catagtttatgtgatcctttt 81012
to top
>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18,
             complete sequence
          Length = 154557

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 517   catagtttatgtgatcctttt 537
             |||||||||||||||||||||
Sbjct: 77925 catagtttatgtgatcctttt 77905
to top
>ref|NM_101077.4| Arabidopsis thaliana catalytic/ fumarylacetoacetase AT1G12050 mRNA,
            complete cds
          Length = 1634

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 381  ctcagattgcatccattaacagtgtggtgtgctagttgctgcgt 424
            |||| |||||| || ||||| || ||||||||||| ||||||||
Sbjct: 1148 ctcaaattgcaaccgttaacggtatggtgtgctagctgctgcgt 1105
to top
>gb|AY126660.1| Canis lupus MHC class II antigen (Calu-DRB1) gene, Calu-DRB1*14
           allele, exon 2 and partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AY126652.1| Canis lupus MHC class II antigen (Calu-DQB1) gene, Calu-DQB1*01
           allele, exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AY126650.1| Canis lupus MHC class II antigen (DLA-DQB1) gene, DLA-DQB1*04001
           allele, exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|DQ499153.1| Canis familiaris MHC class II antigen (DLA-DQB1) gene,
           DLA-DQB1*05301 allele, exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|U40959.1| Caenorhabditis elegans cosmid B0310, complete sequence
          Length = 39130

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    taagcccttgaagatacatg 104
             ||||||||||||||||||||
Sbjct: 25707 taagcccttgaagatacatg 25726
to top
>emb|AL390718.11| Human DNA sequence from clone RP11-502H18 on chromosome 1 Contains the 3'
              end of a novel gene, a novel gene, the QSCN6 gene for
              quiescin Q6 and a CpG island, complete sequence
          Length = 176123

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    tccattaacagtgtggtgtg 411
              ||||||||||||||||||||
Sbjct: 155090 tccattaacagtgtggtgtg 155071
to top
>gb|AF516923.1| Canis latrans MHC class II histocompatibility antigen (Cala-DRB)
           gene, Cala-DRB*16 allele, partial cds
          Length = 280

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 179 atctccttctgcccgttcca 160
to top
>gb|AF516916.1| Canis rufus MHC class II histocompatibility antigen (Caru-DRB)
           gene, Caru-DRB*1 allele, partial cds
          Length = 280

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 179 atctccttctgcccgttcca 160
to top
>gb|AY009512.1| Canis rufus MHC Class II antigen (Caru-DRB) gene, Caru-DRB*1
           allele, exon 2 and partial cds
          Length = 207

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 146 atctccttctgcccgttcca 127
to top
>gb|AY009511.1| Canis lupus MHC Class II antigen (Calu-DRB) gene, Calu-DRB*11
           allele, exon 2 and partial cds
          Length = 207

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 146 atctccttctgcccgttcca 127
to top
>gb|AY009510.1| Canis lupus MHC Class II antigen (Calu-DRB) gene, Calu-DRB*6
           allele, exon 2 and partial cds
          Length = 207

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 146 atctccttctgcccgttcca 127
to top
>emb|AJ316223.1|CFA316223 Canis lupus partial DLA-DQB1 gene for MHC class II antigen,
           DQB1*04001 allele, exon 2
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>emb|AJ311095.1|CFA311095 Canis familiaris partial DLA-DRB1 gene for MHC class II antigen,
           exon 2 DRB1*05101 allele
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AC153550.10| Mus musculus 10 BAC RP23-250H23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 168208

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   caaaggctcaggttcctgct 570
             ||||||||||||||||||||
Sbjct: 64541 caaaggctcaggttcctgct 64522
to top
>gb|DQ415890.1| Canis familiaris MHC class II antigen (DLA-DQB1) gene,
           DLA-DQB1*Bali1 allele, exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>dbj|AB223280.1| Aspergillus oryzae cDNA, contig sequence: AoEST0111
          Length = 732

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  taccatcactactaagccct 92
           ||||||||||||||||||||
Sbjct: 349 taccatcactactaagccct 368
to top
>dbj|AB223182.1| Aspergillus oryzae cDNA, contig sequence: AoEST0013
          Length = 732

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  taccatcactactaagccct 92
           ||||||||||||||||||||
Sbjct: 146 taccatcactactaagccct 165
to top
>gb|AY094010.1| Arabidopsis thaliana At1g12050/F12F1_8 mRNA, complete cds
          Length = 1266

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 381  ctcagattgcatccattaacagtgtggtgtgctagttgctgcgt 424
            |||| |||||| || ||||| || ||||||||||| ||||||||
Sbjct: 1037 ctcaaattgcaaccgttaacggtatggtgtgctagctgctgcgt 994
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      taccatcactactaagccct 92
               ||||||||||||||||||||
Sbjct: 1917019 taccatcactactaagccct 1917000
to top
>gb|AC097494.3| Homo sapiens BAC clone RP11-273B19 from 4, complete sequence
          Length = 144135

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   cagctctgctttattccaag 125
             ||||||||||||||||||||
Sbjct: 39528 cagctctgctttattccaag 39547
to top
>gb|AY074575.1| Arabidopsis thaliana
          Length = 1582

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 381  ctcagattgcatccattaacagtgtggtgtgctagttgctgcgt 424
            |||| |||||| || ||||| || ||||||||||| ||||||||
Sbjct: 1148 ctcaaattgcaaccgttaacggtatggtgtgctagctgctgcgt 1105
to top
>gb|AC023533.6| Homo sapiens chromosome 8, clone RP11-288G19, complete sequence
          Length = 193083

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   atatgtttgaaattggtctt 457
             ||||||||||||||||||||
Sbjct: 93793 atatgtttgaaattggtctt 93812
to top
>gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   gtgatccttttcagctaagt 546
             ||||||||||||||||||||
Sbjct: 82158 gtgatccttttcagctaagt 82139
to top
>gb|AC022639.7| Homo sapiens, clone RP11-27K19, complete sequence
          Length = 168954

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 438    atatgtttgaaattggtctt 457
              ||||||||||||||||||||
Sbjct: 164401 atatgtttgaaattggtctt 164420
to top
>gb|S76138.1| DLA-DRB1 (DLA-DRB1-Dw3)=leucocyte antigen class II region [dogs,
           Genomic, 300 nt]
          Length = 300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 212 atctccttctgcccgttcca 193
to top
>ref|NM_001023398.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC1906.03),
           partial mRNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 cagtgtggtgtgctagttgc 419
           ||||||||||||||||||||
Sbjct: 422 cagtgtggtgtgctagttgc 441
to top
>gb|AF336108.1|AF336108 Canis lupus MHC class II antigen beta chain (DLA-DRB1) gene,
           DLA-DRB1*03101 allele, partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>emb|BX817509.1|CNS0AE5N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL27ZG10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 871

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 381 ctcagattgcatccattaacagtgtggtgtgctagttgctgcgt 424
           |||| |||||| || ||||| || ||||||||||| ||||||||
Sbjct: 440 ctcaaattgcaaccgttaacggtatggtgtgctagctgctgcgt 397
to top
>gb|AF343741.1|AF343741 Canis familiaris MHC class II antigen beta chain (DLA-DRB1) gene,
           DLA-DRB1*04001 allele, partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AF343740.1|AF343740 Canis lupus MHC class II antigen beta chain (DLA-DRB1) gene,
           DLA-DRB1*03901 allele, partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AF343732.1|AF343732 Canis lupus MHC class II antigen beta chain (DLA-DQB1) gene,
           DLA-DQB1*01401 allele, partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 177364

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   caaaggctcaggttcctgct 570
             ||||||||||||||||||||
Sbjct: 48097 caaaggctcaggttcctgct 48116
to top
>gb|AY220508.1| Canis familiaris MHC class II antigen beta chain (DLA-DRB1) gene,
           DLA-DRB1*05801 allele, exon 2 and partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AY220507.1| Canis familiaris MHC class II antigen beta chain (DLA-DRB1) gene,
           DLA-DRB1*05701 allele, exon 2 and partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AF113704.1|AF113704 Canis familiaris MHC class II antigen DLA-DQ beta chain domain 1
           DLA-DQB1 gene (DLA-DQB1-DQB22 allele), exon 2 and
           partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AF113705.1|AF113705 Canis familiaris MHC class II antigen DLA-DQ beta chain domain 1
           DLA-DQB1 gene (DLA-DQB1-DQB23 allele), exon 2 and
           partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AY009941.1| Canis familiaris MHC class II antigen beta chain (DLA-DRB1) gene,
           DLA-DRB1*03201 allele, partial cds
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|AC154022.2| Mus musculus 6 BAC RP24-402L3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 125205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   attaacagtgtggtgtgcta 414
             ||||||||||||||||||||
Sbjct: 67142 attaacagtgtggtgtgcta 67123
to top
>ref|NM_001014768.1| Canis familiaris MHC class II DLA DRB1 beta chain (DLA-DRB1), mRNA
          Length = 1165

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 326 atctccttctgcccgttcca 307
to top
>emb|AL031538.1|SPCC1906 S.pombe chromosome III cosmid c1906
          Length = 15252

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  cagtgtggtgtgctagttgc 419
            ||||||||||||||||||||
Sbjct: 6780 cagtgtggtgtgctagttgc 6799
to top
>gb|AF043165.1|AF043165 Canis familiaris MHC class II DLA-DQ beta chain b1 domain DLA-DQBC1
           gene (DQB20 allele), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AF043164.1|AF043164 Canis familiaris MHC class II DLA-DQ beta chain b1 domain DLA-DQBC1
           gene (DQB19 allele), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AF043161.1|AF043161 Canis familiaris MHC class II DLA-DQ beta chain b1 domain DLA-DQBC1
           gene (DQB16 allele), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AF043160.1|AF043160 Canis familiaris MHC class II DLA-DQ beta chain b1 domain DLA-DQBC1
           gene (DQB15 allele), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AF043156.1|AF043156 Canis familiaris MHC class II DLA-DQ beta chain b1 domain DLA-DQBC1
           gene (DQB11 allele), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence
          Length = 123386

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 381   ctcagattgcatccattaacagtgtggtgtgctagttgctgcgt 424
             |||| |||||| || ||||| || ||||||||||| ||||||||
Sbjct: 39226 ctcaaattgcaaccgttaacggtatggtgtgctagctgctgcgt 39269
to top
>gb|AF061039.1|AF061039 Canis familiaris MHC class II antigen beta chain DLA-DRBB1 gene,
           (DLA-DRBB1-DRB26 allele), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>emb|AM084382.1| Canis familiaris partial DLA-DRB1 gene for MHC class II antigen,
           DLA-DRB1*00103 allele, exon 2
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>emb|AM076471.1| Canis familiaris partial DLA-DRB1 gene for MHC class II antigen,
           DLA-DRB1*06901 allele, exon 2
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>emb|AM076470.1| Canis familiaris partial DLA-DRB1 gene for MHC class II antigen,
           DLA-DRB1*06801 allele, exon 2
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|U58685.1|CFU58685 Canis familiaris MHC Class II DLA DRBB1 beta chain gene (allele
           D22), exon 2 and partial cds
          Length = 267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 185 atctccttctgcccgttcca 166
to top
>gb|M30129.1|DOGMHCDOBA Dog MHC class II DLA beta chain variable region (1-Dob-A) gene
          Length = 163

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 129 atctccttctgcccgttcca 110
to top
>gb|M30132.1|DOGMHC3LAB Dog MHC class II DLA beta chain variable region (3-Lab) gene
          Length = 166

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 132 atctccttctgcccgttcca 113
to top
>emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chromosome 4, complete
             sequence
          Length = 207430

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tgaagatcatcctccctgtt 148
             ||||||||||||||||||||
Sbjct: 50979 tgaagatcatcctccctgtt 50960
to top
>emb|AJ012456.1|CFA012456 Canis Familiaris DLA-DRB1 gene, DRB1*0802 allele, exon 2
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>emb|AJ012455.1|CFA012455 Canis Familiaris DLA-DRB1 gene, DRB1*2901 allele, exon 2
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 187 atctccttctgcccgttcca 168
to top
>gb|M29611.1|DOGMHDRBA C.familiaris MHC class II DLA-DR-beta-1 gene, complete cds
          Length = 1165

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 326 atctccttctgcccgttcca 307
to top
>gb|M57529.1|DOGMHCDW4 Canine MHC class II DLA-DRB mRNA (Dw4), partial cds
          Length = 771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 275 atctccttctgcccgttcca 256
to top
>gb|M57535.1|DOGMHCD8 Canine MHC class II DLA-DRB mRNA (D8), partial cds
          Length = 771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atctccttctgcccgttcca 304
           ||||||||||||||||||||
Sbjct: 275 atctccttctgcccgttcca 256
to top
>dbj|D89232.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 1417
          Length = 1389

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 cagtgtggtgtgctagttgc 419
           ||||||||||||||||||||
Sbjct: 111 cagtgtggtgtgctagttgc 130
to top
>dbj|AB045893.1| Nepenthes alata NaAP3 mRNA for aspartic proteinase 3, complete cds
          Length = 1753

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 attcccaactgatatctcct 291
           ||||||||||||||||||||
Sbjct: 611 attcccaactgatatctcct 592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,856,019
Number of Sequences: 3902068
Number of extensions: 4856019
Number of successful extensions: 98191
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98020
Number of HSP's gapped (non-prelim): 167
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top