ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags14n04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465344.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2082 Score = 529 bits (267), Expect = e-147 Identities = 413/462 (89%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 1692 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 1633 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 | ||||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| Sbjct: 1632 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccaggatgtttgt 1573 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 ||||| || |||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 1572 aatctgacccttcctcacattgatgcctgcattcttctcacccttggcatgacgattccg 1513 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 ||||| || ||||| | ||| || |||||||||||||||||||| ||||||||||| || Sbjct: 1512 aagctcagtcacaatagaaataggattgagccctgcattctctgctaatgtgtaaggaat 1453 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1452 gacctcaagtgcctcagcaaactccttgatgcagtaactctccatcccttggagctcctt 1393 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 || ||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| | Sbjct: 1392 tgcccaagcagcaagctgcattgacatctctatttctggtgcaccaccaccagcaatcaa 1333 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1332 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatgaagactgcgctcagc 1273 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagt 622 ||||||||| || |||||||||||||| |||||||||||||| Sbjct: 1272 ttcatcaattactaactggttggacccccggacaagcacagt 1231
>dbj|AK067672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K24, full insert sequence Length = 2081 Score = 529 bits (267), Expect = e-147 Identities = 413/462 (89%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 1691 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 1632 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 | ||||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| Sbjct: 1631 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccaggatgtttgt 1572 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 ||||| || |||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 1571 aatctgacccttcctcacattgatgcctgcattcttctcacccttggcatgacgattccg 1512 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 ||||| || ||||| | ||| || |||||||||||||||||||| ||||||||||| || Sbjct: 1511 aagctcagtcacaatagaaataggattgagccctgcattctctgctaatgtgtaaggaat 1452 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1451 gacctcaagtgcctcagcaaactccttgatgcagtaactctccatcccttggagctcctt 1392 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 || ||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| | Sbjct: 1391 tgcccaagcagcaagctgcattgacatctctatttctggtgcaccaccaccagcaatcaa 1332 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1331 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatgaagactgcgctcagc 1272 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagt 622 ||||||||| || |||||||||||||| |||||||||||||| Sbjct: 1271 ttcatcaattactaactggttggacccccggacaagcacagt 1230
>dbj|AK059413.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D02, full insert sequence Length = 836 Score = 529 bits (267), Expect = e-147 Identities = 413/462 (89%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 585 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 526 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 | ||||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| Sbjct: 525 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccaggatgtttgt 466 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 ||||| || |||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 465 aatctgacccttcctcacattgatgcctgcattcttctcacccttggcatgacgattccg 406 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 ||||| || ||||| | ||| || |||||||||||||||||||| ||||||||||| || Sbjct: 405 aagctcagtcacaatagaaataggattgagccctgcattctctgctaatgtgtaaggaat 346 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 345 gacctcaagtgcctcagcaaactccttgatgcagtaactctccatcccttggagctcctt 286 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 || ||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| | Sbjct: 285 tgcccaagcagcaagctgcattgacatctctatttctggtgcaccaccaccagcaatcaa 226 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 225 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatgaagactgcgctcagc 166 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagt 622 ||||||||| || |||||||||||||| |||||||||||||| Sbjct: 165 ttcatcaattactaactggttggacccccggacaagcacagt 124
>gb|AY104979.1| Zea mays PCO112869 mRNA sequence Length = 1979 Score = 507 bits (256), Expect = e-140 Identities = 411/463 (88%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| |||||||| || ||||||||||||||||||||||| || |||||||| || | Sbjct: 1762 ttacctaacagtgacaatgtcatcaatcttcaagatcattctgacacactcgcaggctaa 1703 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 || ||||| || |||||||| |||||||| |||||||||||||||| |||||||||||| Sbjct: 1702 cgtaatggcacttgtgctcaccagcaacggctgcacgacattctcctccaggatgtttgt 1643 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 |||||| ||||||||||| |||||||| |||||||||||||| |||||||||| ||||| Sbjct: 1642 gatctgccctttcctcacattgatgccagtgttcttctcacctctggcatggcgattcct 1583 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 || ||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1582 gagttcggtgacaatggagattgggttgagcccagcattctcagccaatgtgtaagggat 1523 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 ||||||||| || ||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1522 gacctcaagcgcctcagcaaactccttgatgcagtaactctccatccctcgaagctcctt 1463 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 || |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 1462 tgcccaagcagccagctgcattgacatctctatttctggagcaccaccaccagcaatcaa 1403 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 |||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||||| Sbjct: 1402 aaacctcttgttgaccaagcaccttatgacacagagtgcatcatggagactacgttcagc 1343 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagtt 623 ||||||||||||||| ||||| || || | |||||| |||||| Sbjct: 1342 ttcatcaataaccaattggttagatcccctgacaagtacagtt 1300
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 418 bits (211), Expect = e-114 Identities = 342/386 (88%) Strand = Plus / Plus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 13560241 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 13560300 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 | ||||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| Sbjct: 13560301 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccaggatgtttgt 13560360 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 ||||| || |||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 13560361 aatctgacccttcctcacattgatgcctgcattcttctcacccttggcatgacgattccg 13560420 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 ||||| || ||||| | ||| || |||||||||||||||||||| ||||||||||| || Sbjct: 13560421 aagctcagtcacaatagaaataggattgagccctgcattctctgctaatgtgtaaggaat 13560480 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 13560481 gacctcaagtgcctcagcaaactccttgatgcagtaactctccatcccttggagctcctt 13560540 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 || ||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| | Sbjct: 13560541 tgcccaagcagcaagctgcattgacatctctatttctggtgcaccaccaccagcaatcaa 13560600 Query: 521 aaacctcttgttcaccaagcacctga 546 |||||||||||||||||||||||||| Sbjct: 13560601 aaacctcttgttcaccaagcacctga 13560626 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 541 acctgatgacacaaagggcatcatggagactgcggtcagcttcatcaataaccaactggt 600 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 13563725 acctgatgacacaaagggcatcatgaagactgcgctcagcttcatcaattactaactggt 13563784 Query: 601 tggacccacggacaagcacagt 622 ||||||| |||||||||||||| Sbjct: 13563785 tggacccccggacaagcacagt 13563806
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 418 bits (211), Expect = e-114 Identities = 342/386 (88%) Strand = Plus / Plus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 75546 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 75605 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 | ||||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| Sbjct: 75606 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccaggatgtttgt 75665 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 ||||| || |||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 75666 aatctgacccttcctcacattgatgcctgcattcttctcacccttggcatgacgattccg 75725 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 ||||| || ||||| | ||| || |||||||||||||||||||| ||||||||||| || Sbjct: 75726 aagctcagtcacaatagaaataggattgagccctgcattctctgctaatgtgtaaggaat 75785 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 75786 gacctcaagtgcctcagcaaactccttgatgcagtaactctccatcccttggagctcctt 75845 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 || ||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| | Sbjct: 75846 tgcccaagcagcaagctgcattgacatctctatttctggtgcaccaccaccagcaatcaa 75905 Query: 521 aaacctcttgttcaccaagcacctga 546 |||||||||||||||||||||||||| Sbjct: 75906 aaacctcttgttcaccaagcacctga 75931 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 541 acctgatgacacaaagggcatcatggagactgcggtcagcttcatcaataaccaactggt 600 ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 79030 acctgatgacacaaagggcatcatgaagactgcgctcagcttcatcaattactaactggt 79089 Query: 601 tggacccacggacaagcacagt 622 ||||||| |||||||||||||| Sbjct: 79090 tggacccccggacaagcacagt 79111
>gb|BT018933.1| Zea mays clone Contig68.F mRNA sequence Length = 1331 Score = 392 bits (198), Expect = e-106 Identities = 326/369 (88%) Strand = Plus / Minus Query: 255 acgacattctcctncaggatgtttgtgatctggcctttcctcacgttgatgcccgtgttc 314 ||||||||||||| ||||||||||| |||||| ||||||| ||| |||||||| |||||| Sbjct: 1083 acgacattctcctccaggatgtttgggatctgccctttccgcacattgatgccagtgttc 1024 Query: 315 ttctcacccttggcatggcggttccttagctcggtaacaatggcaattgggttgagccct 374 |||||||| ||| |||| | ||||| || ||||| ||||||| ||||||| ||||||| Sbjct: 1023 ttctcacctctgggatggggattcctgagttcggtgacaatgggaattggggtgagccca 964 Query: 375 gcattctctgccaatgtgtaagggatgacctcaagtgcatcagcaaactccttgatgcag 434 |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 963 gcattctcagccaatgtgtaagggatgacctcaagcgcctcagcaaactccttgatgcag 904 Query: 435 taactctccatcccatggagctcctttgaccaagcagccagttgcattgacatttctatt 494 |||||||||||||| | |||||||||| |||||||||||| ||||||||||| |||||| Sbjct: 903 taactctccatccctcgaagctcctttgcccaagcagccagctgcattgacatctctatt 844 Query: 495 tcaggagcaccgccaccagcaattagaaacctcttgttcaccaagcacctgatgacacaa 554 || |||||||| ||||||||||| | ||| |||||| | ||||||||||| |||||||| Sbjct: 843 tctggagcaccaccaccagcaatcaaaaatctcttgctgaccaagcaccttatgacacag 784 Query: 555 agggcatcatggagactgcggtcagcttcatcaataaccaactggttggacccacggaca 614 || ||||||||||||||||| |||||||||||||||||||| ||||| || || | |||| Sbjct: 783 agtgcatcatggagactgcgttcagcttcatcaataaccaattggttagatcccctgaca 724 Query: 615 agcacagtt 623 || |||||| Sbjct: 723 agtacagtt 715
>ref|NM_197338.1| Oryza sativa (japonica cultivar-group) putative cytosolic chaperonin, delta-subunit (OSJNBa0026L12.9), mRNA Length = 1626 Score = 357 bits (180), Expect = 3e-95 Identities = 392/463 (84%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| || ||||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 1626 ttacctcacggtgacaatatcatcaatcttcagtatcatcctaacacactcgcaggccag 1567 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 || || ||||||||||||||| |||| || |||||||||||||||| ||||||||| || Sbjct: 1566 cgtgacggcgctcgtgctcaccagcagtggctgcacgacattctcctccaggatgttcgt 1507 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 |||| | || |||||||||||||| || | ||||||||| |||||||||||||| |||| Sbjct: 1506 gatccgacccttcctcacgttgatcccggcgttcttctcgcccttggcatggcgattccg 1447 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 |||||||| ||| ||| || || | ||||||||||||||||||||| ||||||||||| Sbjct: 1446 gagctcggtgacagtggagatgggatcgagccctgcattctctgccaacgtgtaagggat 1387 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||| || || || || |||||| ||| |||||||||||||||||| |||||||| Sbjct: 1386 gacctcgagcgcctcggcgaactccctgacgcagtaactctccatccctctcagctcctt 1327 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 | |||||||||||| ||||| ||||| || || ||||||||||| |||||||| || || Sbjct: 1326 cgcccaagcagccagctgcatcgacatctcgatctcaggagcaccaccaccagcgatcag 1267 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||| ||||| | || || ||||| ||||| | ||| Sbjct: 1266 aaacctcttgttcaccaagcacctgatcacacagaatgcgtcgtggaggctgcgctgagc 1207 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagtt 623 ||| || || |||| ||||||||| || |||||||| |||||| Sbjct: 1206 ttcgtcgatcaccatctggttggatccccggacaagaacagtt 1164
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 357 bits (180), Expect = 3e-95 Identities = 392/463 (84%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| || ||||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 54769 ttacctcacggtgacaatatcatcaatcttcagtatcatcctaacacactcgcaggccag 54710 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 || || ||||||||||||||| |||| || |||||||||||||||| ||||||||| || Sbjct: 54709 cgtgacggcgctcgtgctcaccagcagtggctgcacgacattctcctccaggatgttcgt 54650 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 |||| | || |||||||||||||| || | ||||||||| |||||||||||||| |||| Sbjct: 54649 gatccgacccttcctcacgttgatcccggcgttcttctcgcccttggcatggcgattccg 54590 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 |||||||| ||| ||| || || | ||||||||||||||||||||| ||||||||||| Sbjct: 54589 gagctcggtgacagtggagatgggatcgagccctgcattctctgccaacgtgtaagggat 54530 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||| || || || || |||||| ||| |||||||||||||||||| |||||||| Sbjct: 54529 gacctcgagcgcctcggcgaactccctgacgcagtaactctccatccctctcagctcctt 54470 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 | |||||||||||| ||||| ||||| || || ||||||||||| |||||||| || || Sbjct: 54469 cgcccaagcagccagctgcatcgacatctcgatctcaggagcaccaccaccagcgatcag 54410 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||| ||||| | || || ||||| ||||| | ||| Sbjct: 54409 aaacctcttgttcaccaagcacctgatcacacagaatgcgtcgtggaggctgcgctgagc 54350 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagtt 623 ||| || || |||| ||||||||| || |||||||| |||||| Sbjct: 54349 ttcgtcgatcaccatctggttggatccccggacaagaacagtt 54307
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 357 bits (180), Expect = 3e-95 Identities = 392/463 (84%) Strand = Plus / Plus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| || ||||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 19321612 ttacctcacggtgacaatatcatcaatcttcagtatcatcctaacacactcgcaggccag 19321671 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 || || ||||||||||||||| |||| || |||||||||||||||| ||||||||| || Sbjct: 19321672 cgtgacggcgctcgtgctcaccagcagtggctgcacgacattctcctccaggatgttcgt 19321731 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 |||| | || |||||||||||||| || | ||||||||| |||||||||||||| |||| Sbjct: 19321732 gatccgacccttcctcacgttgatcccggcgttcttctcgcccttggcatggcgattccg 19321791 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 |||||||| ||| ||| || || | ||||||||||||||||||||| ||||||||||| Sbjct: 19321792 gagctcggtgacagtggagatgggatcgagccctgcattctctgccaacgtgtaagggat 19321851 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||| || || || || |||||| ||| |||||||||||||||||| |||||||| Sbjct: 19321852 gacctcgagcgcctcggcgaactccctgacgcagtaactctccatccctctcagctcctt 19321911 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 | |||||||||||| ||||| ||||| || || ||||||||||| |||||||| || || Sbjct: 19321912 cgcccaagcagccagctgcatcgacatctcgatctcaggagcaccaccaccagcgatcag 19321971 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||| ||||| | || || ||||| ||||| | ||| Sbjct: 19321972 aaacctcttgttcaccaagcacctgatcacacagaatgcgtcgtggaggctgcgctgagc 19322031 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagtt 623 ||| || || |||| ||||||||| || |||||||| |||||| Sbjct: 19322032 ttcgtcgatcaccatctggttggatccccggacaagaacagtt 19322074
>dbj|AK070291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I10, full insert sequence Length = 1849 Score = 357 bits (180), Expect = 3e-95 Identities = 392/463 (84%) Strand = Plus / Minus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| || ||||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 1680 ttacctcacggtgacaatatcatcaatcttcagtatcatcctaacacactcgcaggccag 1621 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 || || ||||||||||||||| |||| || |||||||||||||||| ||||||||| || Sbjct: 1620 cgtgacggcgctcgtgctcaccagcagtggctgcacgacattctcctccaggatgttcgt 1561 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 |||| | || |||||||||||||| || | ||||||||| |||||||||||||| |||| Sbjct: 1560 gatccgacccttcctcacgttgatcccggcgttcttctcgcccttggcatggcgattccg 1501 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 |||||||| ||| ||| || || | ||||||||||||||||||||| ||||||||||| Sbjct: 1500 gagctcggtgacagtggagatgggatcgagccctgcattctctgccaacgtgtaagggat 1441 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||| || || || || |||||| ||| |||||||||||||||||| |||||||| Sbjct: 1440 gacctcgagcgcctcggcgaactccctgacgcagtaactctccatccctctcagctcctt 1381 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 | |||||||||||| ||||| ||||| || || ||||||||||| |||||||| || || Sbjct: 1380 cgcccaagcagccagctgcatcgacatctcgatctcaggagcaccaccaccagcgatcag 1321 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||| ||||| | || || ||||| ||||| | ||| Sbjct: 1320 aaacctcttgttcaccaagcacctgatcacacagaatgcgtcgtggaggctgcgctgagc 1261 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagtt 623 ||| || || |||| ||||||||| || |||||||| |||||| Sbjct: 1260 ttcgtcgatcaccatctggttggatccccggacaagaacagtt 1218
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 357 bits (180), Expect = 3e-95 Identities = 392/463 (84%) Strand = Plus / Plus Query: 161 ttaccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 220 |||||| || ||||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 19332888 ttacctcacggtgacaatatcatcaatcttcagtatcatcctaacacactcgcaggccag 19332947 Query: 221 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgt 280 || || ||||||||||||||| |||| || |||||||||||||||| ||||||||| || Sbjct: 19332948 cgtgacggcgctcgtgctcaccagcagtggctgcacgacattctcctccaggatgttcgt 19333007 Query: 281 gatctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcct 340 |||| | || |||||||||||||| || | ||||||||| |||||||||||||| |||| Sbjct: 19333008 gatccgacccttcctcacgttgatcccggcgttcttctcgcccttggcatggcgattccg 19333067 Query: 341 tagctcggtaacaatggcaattgggttgagccctgcattctctgccaatgtgtaagggat 400 |||||||| ||| ||| || || | ||||||||||||||||||||| ||||||||||| Sbjct: 19333068 gagctcggtgacagtggagatgggatcgagccctgcattctctgccaacgtgtaagggat 19333127 Query: 401 gacctcaagtgcatcagcaaactccttgatgcagtaactctccatcccatggagctcctt 460 |||||| || || || || |||||| ||| |||||||||||||||||| |||||||| Sbjct: 19333128 gacctcgagcgcctcggcgaactccctgacgcagtaactctccatccctctcagctcctt 19333187 Query: 461 tgaccaagcagccagttgcattgacatttctatttcaggagcaccgccaccagcaattag 520 | |||||||||||| ||||| ||||| || || ||||||||||| |||||||| || || Sbjct: 19333188 cgcccaagcagccagctgcatcgacatctcgatctcaggagcaccaccaccagcgatcag 19333247 Query: 521 aaacctcttgttcaccaagcacctgatgacacaaagggcatcatggagactgcggtcagc 580 ||||||||||||||||||||||||||| ||||| | || || ||||| ||||| | ||| Sbjct: 19333248 aaacctcttgttcaccaagcacctgatcacacagaatgcgtcgtggaggctgcgctgagc 19333307 Query: 581 ttcatcaataaccaactggttggacccacggacaagcacagtt 623 ||| || || |||| ||||||||| || |||||||| |||||| Sbjct: 19333308 ttcgtcgatcaccatctggttggatccccggacaagaacagtt 19333350
>emb|AJ583803.1| Glycine max cctd gene for cytosolic chaperonin delta-subunit, cultivar Cuc Vang Length = 1602 Score = 69.9 bits (35), Expect = 1e-08 Identities = 163/206 (79%) Strand = Plus / Minus Query: 162 taccttacagtgactatatcatcaatcttcaagatcattctaacgcactcgcacgccagc 221 ||||| ||||| || ||||||||||||||||| ||||| | || ||||| ||||| | Sbjct: 1601 tacctcacagttacaatatcatcaatcttcaaaatcatccgcacacactctgtcgccaac 1542 Query: 222 gagatggcgctcgtgctcacaagcaacggttgcacgacattctcctncaggatgtttgtg 281 ||| || || ||||| ||||| | || ||||| |||||||||| || |||||| || Sbjct: 1541 atgatcgcacttgtgctaacaagaaggggctgcaccacattctcctccaagatgttggta 1482 Query: 282 atctggcctttcctcacgttgatgcccgtgttcttctcacccttggcatggcggttcctt 341 ||||| || |||||||| || || || | || ||||||||| ||||| || ||||| Sbjct: 1481 atctgacccttcctcacatttattccagcatttatctcaccctgtgcatgacgattcctc 1422 Query: 342 agctcggtaacaatggcaattgggtt 367 |||||||||||||||||||| ||||| Sbjct: 1421 agctcggtaacaatggcaatcgggtt 1396
>emb|AJ012318.1|GMA012318 Glycine max cctd gene Length = 1602 Score = 65.9 bits (33), Expect = 2e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 252 tgcacgacattctcctncaggatgtttgtgatctggcctttcctcacgttgatgcccgtg 311 ||||| |||||||||| || |||||| || ||||| || |||||||| || || || | Sbjct: 1511 tgcaccacattctcctccaagatgttggtaatctgacccttcctcacatttattccagca 1452 Query: 312 ttcttctcacccttggcatggcggttccttagctcggtaacaatggcaattgggtt 367 || ||||||||| ||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 1451 tttatctcaccctgtgcatgacgattcctcagctcggtaacaatggcaatcgggtt 1396
>gb|DQ016992.1| Ipomoea batatas putative cytosolic chaperonin delta subunit mRNA, partial cds Length = 680 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 576 tcagcttcatcaataaccaactggttggacccacggacaagcacag 621 ||||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 99 tcagcttcatcaataaccaactgattggaccctcgaaccagcacag 54 Score = 58.0 bits (29), Expect = 4e-05 Identities = 148/188 (78%) Strand = Plus / Minus Query: 234 gtgctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttc 293 ||||||||||| | || ||||| |||||||||| || ||||| |||||||| || ||| Sbjct: 441 gtgctcacaaggagtggctgcactacattctcctccaaaatgttagtgatctgccccttc 382 Query: 294 ctcacgttgatgcccgtgttcttctcacccttggcatggcggttccttagctcggtaaca 353 ||||| ||||| || | || ||||||||| ||||| | ||||||| ||| || ||| Sbjct: 381 ctcacattgatcccagcattgatctcaccctgtgcatgcctattccttaactcagtcaca 322 Query: 354 atggcaattgggttgagccctgcattctctgccaatgtgtaagggatgacctcaagtgca 413 || | || ||||| || || |||||||| || ||||| ||||| || |||||||| || Sbjct: 321 atagttatagggttcagtccagcattctcagctaatgtataaggaataacctcaagagct 262 Query: 414 tcagcaaa 421 |||||||| Sbjct: 261 tcagcaaa 254
>gb|AF053556.1|AF053556 Mesembryanthemum crystallinum chaperonin homolog mRNA, partial cds Length = 331 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 162 taccttacagtgactatatcatcaatcttcaagatcattctaacgcactc 211 ||||| |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 118 tacctcacagtgacaatgtcatcaatcttcaaaatcattctgacacactc 69
>ref|NM_112702.2| Arabidopsis thaliana ATP binding / protein binding AT3G18190 mRNA, complete cds Length = 1935 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Minus Query: 237 ctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttcctc 296 |||||||||| || || || ||||| |||| || |||||| |||||||| ||||||||| Sbjct: 1635 ctcacaagcagaggctgaacaacattttcctccaagatgttagtgatctgtcctttcctc 1576 Query: 297 acgttgat 304 || ||||| Sbjct: 1575 acattgat 1568
>gb|BC065324.1| Danio rerio chaperonin containing TCP1, subunit 4 (delta), mRNA (cDNA clone MGC:77192 IMAGE:6961875), complete cds Length = 1955 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 366 ttgagccctgcattctctgccaatgtgtaagggatgacctcaagtgcatcagc 418 ||||| ||||| ||||||||||| ||| | || ||||||||||| |||||||| Sbjct: 1551 ttgagtcctgcgttctctgccaacgtggagggaatgacctcaagggcatcagc 1499
>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence Length = 122819 Score = 50.1 bits (25), Expect = 0.009 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 327 gcatggcggttccttagctcggtaacaatggcaattgggttgagccctgcattctctgcc 386 ||||| || ||||| ||||| |||||||| ||||| || || | || |||||||| ||| Sbjct: 112508 gcatgacgattcctcagctcagtaacaatcgcaatcggattcaaaccagcattctcggcc 112567 Query: 387 aatgtgtaagggatgacctcaagtgcatcagcaaactccttga-tgcagtaactctccat 445 || || || || ||||| || ||||| |||||||| | ||||| ||||| ||| ||||| Sbjct: 112568 aaagtatacggaatgacttcgagtgcctcagcaaa-tgcttgaatgcaggaaccttccat 112626 Query: 446 cccatggagctcctttgaccaagca 470 |||||| ||| |||||| ||||||| Sbjct: 112627 cccatgcagcacctttgcccaagca 112651
>gb|BC056719.1| Danio rerio chaperonin containing TCP1, subunit 4 (delta), mRNA (cDNA clone MGC:65789 IMAGE:6790812), complete cds Length = 1940 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 366 ttgagccctgcattctctgccaatgtgtaagggatgacctcaagtgcatcagc 418 ||||| ||||| ||||||||||| ||| | || ||||||||||| |||||||| Sbjct: 1553 ttgagtcctgcgttctctgccaacgtggagggaatgacctcaagggcatcagc 1501
>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence Length = 151594 Score = 50.1 bits (25), Expect = 0.009 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 327 gcatggcggttccttagctcggtaacaatggcaattgggttgagccctgcattctctgcc 386 ||||| || ||||| ||||| |||||||| ||||| || || | || |||||||| ||| Sbjct: 39090 gcatgacgattcctcagctcagtaacaatcgcaatcggattcaaaccagcattctcggcc 39031 Query: 387 aatgtgtaagggatgacctcaagtgcatcagcaaactccttga-tgcagtaactctccat 445 || || || || ||||| || ||||| |||||||| | ||||| ||||| ||| ||||| Sbjct: 39030 aaagtatacggaatgacttcgagtgcctcagcaaa-tgcttgaatgcaggaaccttccat 38972 Query: 446 cccatggagctcctttgaccaagca 470 |||||| ||| |||||| ||||||| Sbjct: 38971 cccatgcagcacctttgcccaagca 38947
>gb|AY099877.1| Arabidopsis thaliana chaperonin subunit, putative (At3g18190) mRNA, complete cds Length = 1908 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Minus Query: 237 ctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttcctc 296 |||||||||| || || || ||||| |||| || |||||| |||||||| ||||||||| Sbjct: 1609 ctcacaagcagaggctgaacaacattttcctccaagatgttagtgatctgtcctttcctc 1550 Query: 297 acgttgat 304 || ||||| Sbjct: 1549 acattgat 1542
>gb|AY093777.1| Arabidopsis thaliana AT3g18190/MRC8_18 mRNA sequence Length = 1821 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Minus Query: 237 ctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttcctc 296 |||||||||| || || || ||||| |||| || |||||| |||||||| ||||||||| Sbjct: 1521 ctcacaagcagaggctgaacaacattttcctccaagatgttagtgatctgtcctttcctc 1462 Query: 297 acgttgat 304 || ||||| Sbjct: 1461 acattgat 1454
>gb|BT003418.1| Arabidopsis thaliana chaperonin subunit, putative (At3g18190) mRNA, complete cds Length = 1783 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Minus Query: 237 ctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttcctc 296 |||||||||| || || || ||||| |||| || |||||| |||||||| ||||||||| Sbjct: 1535 ctcacaagcagaggctgaacaacattttcctccaagatgttagtgatctgtcctttcctc 1476 Query: 297 acgttgat 304 || ||||| Sbjct: 1475 acattgat 1468
>gb|AY088570.1| Arabidopsis thaliana clone 7925 mRNA, complete sequence Length = 1873 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Minus Query: 237 ctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttcctc 296 |||||||||| || || || ||||| |||| || |||||| |||||||| ||||||||| Sbjct: 1635 ctcacaagcaggggctgaacaacattttcctccaagatgttagtgatctgtcctttcctc 1576 Query: 297 acgttgat 304 || ||||| Sbjct: 1575 acattgat 1568
>dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRC8 Length = 76816 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Minus Query: 237 ctcacaagcaacggttgcacgacattctcctncaggatgtttgtgatctggcctttcctc 296 |||||||||| || || || ||||| |||| || |||||| |||||||| ||||||||| Sbjct: 62758 ctcacaagcagaggctgaacaacattttcctccaagatgttagtgatctgtcctttcctc 62699 Query: 297 acgttgat 304 || ||||| Sbjct: 62698 acattgat 62691
>ref|NM_200583.1| Danio rerio chaperonin containing TCP1, subunit 4 (delta) (cct4), mRNA Length = 1940 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 366 ttgagccctgcattctctgccaatgtgtaagggatgacctcaagtgcatcagc 418 ||||| ||||| ||||||||||| ||| | || ||||||||||| |||||||| Sbjct: 1553 ttgagtcctgcgttctctgccaacgtggagggaatgacctcaagggcatcagc 1501
>ref|XM_517629.1| PREDICTED: Pan troglodytes chaperonin containing TCP1, subunit 5 (epsilon) (LOC461721), mRNA Length = 2130 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 2099 tcatcaatcttcaaaatcattctaac 2074
>ref|NM_012073.3| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon) (CCT5), mRNA Length = 3403 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1766 tcatcaatcttcaaaatcattctaac 1741
>gb|BC035499.2| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA (cDNA clone MGC:20797 IMAGE:4329194), complete cds Length = 1952 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1677 tcatcaatcttcaaaatcattctaac 1652
>dbj|D43950.2|HUMKG1DD Homo sapiens mRNA for KIAA0098 protein, partial cds Length = 1891 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1632 tcatcaatcttcaaaatcattctaac 1607
>emb|CR626727.1| full-length cDNA clone CS0DA005YC18 of Neuroblastoma of Homo sapiens (human) Length = 1839 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1613 tcatcaatcttcaaaatcattctaac 1588
>emb|CR624278.1| full-length cDNA clone CS0DG004YM17 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1572 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1440 tcatcaatcttcaaaatcattctaac 1415
>dbj|AK124354.1| Homo sapiens cDNA FLJ42363 fis, clone UTERU2026775 Length = 2551 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 2396 tcatcaatcttcaaaatcattctaac 2421
>emb|CR621852.1| full-length cDNA clone CS0DK006YF22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1858 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1610 tcatcaatcttcaaaatcattctaac 1585
>emb|CR619740.1| full-length cDNA clone CS0DA004YE17 of Neuroblastoma of Homo sapiens (human) Length = 660 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 332 tcatcaatcttcaaaatcattctaac 307
>emb|CR618337.1| full-length cDNA clone CS0DA004YN07 of Neuroblastoma of Homo sapiens (human) Length = 1826 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1596 tcatcaatcttcaaaatcattctaac 1571
>emb|CR617351.1| full-length cDNA clone CS0DD007YO16 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1786 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1583 tcatcaatcttcaaaatcattctaac 1558
>emb|CR616179.1| full-length cDNA clone CS0DH002YF13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1816 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1586 tcatcaatcttcaaaatcattctaac 1561
>emb|CR611397.1| full-length cDNA clone CS0DI073YJ18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1903 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1612 tcatcaatcttcaaaatcattctaac 1587
>emb|CR609903.1| full-length cDNA clone CS0DF037YB16 of Fetal brain of Homo sapiens (human) Length = 1742 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1595 tcatcaatcttcaaaatcattctaac 1570
>emb|CR606787.1| full-length cDNA clone CS0DG002YD05 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1871 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1631 tcatcaatcttcaaaatcattctaac 1606
>emb|CR605385.1| full-length cDNA clone CS0DF030YN09 of Fetal brain of Homo sapiens (human) Length = 1584 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1374 tcatcaatcttcaaaatcattctaac 1349
>emb|CR604938.1| full-length cDNA clone CS0DE007YC17 of Placenta of Homo sapiens (human) Length = 1861 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1549 tcatcaatcttcaaaatcattctaac 1524
>emb|CR602835.1| full-length cDNA clone CS0DH001YA09 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1752 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1610 tcatcaatcttcaaaatcattctaac 1585
>emb|CR599726.1| full-length cDNA clone CL0BB007ZD11 of Neuroblastoma of Homo sapiens (human) Length = 1526 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1265 tcatcaatcttcaaaatcattctaac 1240
>emb|CR596856.1| full-length cDNA clone CS0DH005YD19 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1857 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1630 tcatcaatcttcaaaatcattctaac 1605
>emb|CR594923.1| full-length cDNA clone CS0DM004YE20 of Fetal liver of Homo sapiens (human) Length = 1742 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1612 tcatcaatcttcaaaatcattctaac 1587
>emb|CR590360.1| full-length cDNA clone CS0DI081YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1844 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1612 tcatcaatcttcaaaatcattctaac 1587
>gb|AC034241.4| Homo sapiens chromosome 5 clone CTD-2360O20, complete sequence Length = 77702 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 70533 tcatcaatcttcaaaatcattctaac 70558
>dbj|AB169078.1| Macaca fascicularis testis cDNA, clone: QtsA-17059, similar to human chaperonin containing TCP1, subunit 5 (epsilon) (CCT5),mRNA, RefSeq: NM_012073.2 Length = 1957 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1617 tcatcaatcttcaaaatcattctaac 1592
>gb|BC009454.1|BC009454 Homo sapiens, clone IMAGE:3534054, mRNA, partial cds Length = 1414 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1134 tcatcaatcttcaaaatcattctaac 1109
>gb|BC002971.1|BC002971 Homo sapiens, clone IMAGE:3543711, mRNA, partial cds Length = 1934 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1590 tcatcaatcttcaaaatcattctaac 1565
>gb|AF275798.1|AF275798 Homo sapiens PNAS-102 mRNA, complete cds Length = 907 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 623 tcatcaatcttcaaaatcattctaac 598
>gb|AC012640.12| Homo sapiens chromosome 5 clone CTD-2256P15, complete sequence Length = 145122 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 115014 tcatcaatcttcaaaatcattctaac 115039
>emb|AJ012489.1|HSA012489 Homo sapiens mRNA activated in tumor suppression, clone TSAP9 Length = 303 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 124 tcatcaatcttcaaaatcattctaac 99
>gb|BC006543.2| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA (cDNA clone MGC:2389 IMAGE:2824199), complete cds Length = 1911 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1630 tcatcaatcttcaaaatcattctaac 1605
>gb|BC040027.1| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA (cDNA clone IMAGE:5394937) Length = 1989 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 tcatcaatcttcaagatcattctaac 205 |||||||||||||| ||||||||||| Sbjct: 1647 tcatcaatcttcaaaatcattctaac 1622
>gb|AC137842.8| Mus musculus chromosome 15, clone RP23-91M6, complete sequence Length = 230609 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 139941 gatgacacacagggcatcatggaga 139917
>gb|BT019208.1| Zea mays clone Contig881.F mRNA sequence Length = 1196 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 557 ggcatcatggagactgcggtcagcttcatcaat 589 ||||||||||||||| || |||||||| ||||| Sbjct: 379 ggcatcatggagacttcgttcagcttcctcaat 347
>gb|BT018658.1| Zea mays clone EL01N0508E09.d mRNA sequence Length = 1864 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 557 ggcatcatggagactgcggtcagcttcatcaat 589 ||||||||||||||| || |||||||| ||||| Sbjct: 1064 ggcatcatggagacttcgttcagcttcctcaat 1032
>gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, complete sequence Length = 172482 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 ccatggagctcctttgaccaa 467 ||||||||||||||||||||| Sbjct: 129669 ccatggagctcctttgaccaa 129689
>ref|NM_007637.1| Mus musculus chaperonin subunit 5 (epsilon) (Cct5), mRNA Length = 1769 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1326 gatgacacacagggcatcatggaga 1302
>gb|AC165946.4| Mus musculus chromosome 1, clone RP24-167M10, complete sequence Length = 157434 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 ccatggagctcctttgaccaa 467 ||||||||||||||||||||| Sbjct: 55243 ccatggagctcctttgaccaa 55223
>emb|Z31555.1|MMCCTEP M.musculus (129/Sv) Ccte mRNA for CCT (chaperonin containing TCP-1) epsilon subunit Length = 1769 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1326 gatgacacacagggcatcatggaga 1302
>gb|BC079441.1| Rattus norvegicus chaperonin subunit 5 (epsilon), mRNA (cDNA clone MGC:94989 IMAGE:7115414), complete cds Length = 1766 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1229 gatgacacacagggcatcatggaga 1205
>ref|NM_001004078.1| Rattus norvegicus chaperonin subunit 5 (epsilon) (Cct5), mRNA Length = 1766 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1229 gatgacacacagggcatcatggaga 1205
>dbj|AK145445.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0046D15 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1807 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1295 gatgacacacagggcatcatggaga 1271
>dbj|AK146425.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730086P06 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1278 gatgacacacagggcatcatggaga 1254
>dbj|AK146405.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730074J22 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1747 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1298 gatgacacacagggcatcatggaga 1274
>dbj|AK136493.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030625O15 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1800 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1278 gatgacacacagggcatcatggaga 1254
>dbj|AK133857.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730455A01 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1707 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1284 gatgacacacagggcatcatggaga 1260
>dbj|AK153911.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004M12 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1722 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1302 gatgacacacagggcatcatggaga 1278
>dbj|AK150390.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006H03 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1690 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1245 gatgacacacagggcatcatggaga 1221
>dbj|AK167895.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730035K07 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1711 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1267 gatgacacacagggcatcatggaga 1243
>dbj|AK077753.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730596N21 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1797 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1285 gatgacacacagggcatcatggaga 1261
>dbj|AK088184.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005M01 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1704 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1260 gatgacacacagggcatcatggaga 1236
>ref|NM_063349.4| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-4) (cct-4) mRNA, complete cds Length = 1816 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 tgtgtaagggatgacctcaagtgcatcagcaaa 421 |||||| || |||| |||||||||||||||||| Sbjct: 1392 tgtgtatggaatgagctcaagtgcatcagcaaa 1360
>gb|BC094427.1| Mus musculus chaperonin subunit 5 (epsilon), mRNA (cDNA clone MGC:122961 IMAGE:30537966), complete cds Length = 1750 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1273 gatgacacacagggcatcatggaga 1249
>gb|AF238884.1|AF238884 Botrytis virus F, complete genome Length = 6827 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 ttcttctcacccttggcatgg 332 ||||||||||||||||||||| Sbjct: 6035 ttcttctcacccttggcatgg 6055
>gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, complete sequence Length = 163408 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 gacatttctatttcaggagca 503 ||||||||||||||||||||| Sbjct: 38602 gacatttctatttcaggagca 38622
>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5 Length = 88356 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ccacgttcacaaataaaattg 46 ||||||||||||||||||||| Sbjct: 36289 ccacgttcacaaataaaattg 36309
>dbj|AK129056.1| Mus musculus mRNA for mKIAA0098 protein Length = 1682 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1232 gatgacacacagggcatcatggaga 1208
>gb|AY104342.1| Zea mays PCO097811 mRNA sequence Length = 2116 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 557 ggcatcatggagactgcggtcagcttcatcaat 589 ||||||||||||||| || |||||||| ||||| Sbjct: 1329 ggcatcatggagacttcgttcagcttcctcaat 1297
>gb|BC092233.1| Mus musculus cDNA clone IMAGE:30551864, containing frame-shift errors Length = 1761 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 1296 gatgacacacagggcatcatggaga 1272
>gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, complete sequence Length = 220046 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 ttagaaacctcttgttcacca 537 ||||||||||||||||||||| Sbjct: 188968 ttagaaacctcttgttcacca 188948
>gb|AC102776.10| Mus musculus chromosome 1, clone RP23-469D21, complete sequence Length = 190746 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 ttagaaacctcttgttcacca 537 ||||||||||||||||||||| Sbjct: 115971 ttagaaacctcttgttcacca 115991
>gb|U25697.1|CEU25697 Caenorhabditis elegans CCT chaperonin subunit 4 (cct-4) mRNA, complete cds Length = 1623 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 tgtgtaagggatgacctcaagtgcatcagcaaa 421 |||||| || |||| |||||||||||||||||| Sbjct: 1392 tgtgtatggaatgagctcaagtgcatcagcaaa 1360
>dbj|AB022158.1| Mus musculus Ccte gene for chaperonin containing TCP-1 epsilon subunit, complete cds Length = 14641 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gatgacacaaagggcatcatggaga 569 ||||||||| ||||||||||||||| Sbjct: 11231 gatgacacacagggcatcatggaga 11207
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ctcaagtgcatcagcaaactcctt 427 ||||||||| |||||||||||||| Sbjct: 73221 ctcaagtgcttcagcaaactcctt 73198
>gb|AC108394.13| Mus musculus chromosome 1, clone RP24-322K23, complete sequence Length = 206294 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 10171 tgcagtaactctccatccca 10152
>gb|U41276.1| Caenorhabditis elegans cosmid C52B11, complete sequence Length = 41039 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ataacaatacagccctaaaa 138 |||||||||||||||||||| Sbjct: 30563 ataacaatacagccctaaaa 30544
>ref|XM_715377.1| Candida albicans SC5314 putative cytosolic chaperonin CCT ring complex subunit Cct4 (CaO19_2720), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 492 atttcaggagcaccgccaccagcaatta 519 ||||| |||||||| ||||||||||||| Sbjct: 1304 atttctggagcaccaccaccagcaatta 1277
>ref|XM_715147.1| Candida albicans SC5314 putative cytosolic chaperonin CCT ring complex subunit Cct4 (CaO19_10235), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 492 atttcaggagcaccgccaccagcaatta 519 ||||| |||||||| ||||||||||||| Sbjct: 1304 atttctggagcaccaccaccagcaatta 1277
>ref|XM_798178.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507763.20) partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 caggagcaccgccaccagca 515 |||||||||||||||||||| Sbjct: 96 caggagcaccgccaccagca 77
>ref|XM_449931.1| Candida glabrata CBS138 hypothetical protein (CAGL0M13519g) partial mRNA Length = 1485 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 tcagcttcatcaataaccaa 595 |||||||||||||||||||| Sbjct: 557 tcagcttcatcaataaccaa 538
>emb|AL512282.6| Human DNA sequence from clone RP11-141F18 on chromosome X, complete sequence Length = 12748 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gatgtttgtgatctggcctt 291 |||||||||||||||||||| Sbjct: 5050 gatgtttgtgatctggcctt 5069
>emb|AL109933.25|HSDJ81D8 Human DNA sequence from clone RP1-81D8 on chromosome 6q25.3-26 Contains the PLG gene for plasminogen, the 5' end of the LPA gene for lipoprotein (Lp(a)), a novel gene, a pseudogene similar to part of plasminogen and a CpG island, complete sequence Length = 163599 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ttcacaaataaaattgtaac 50 |||||||||||||||||||| Sbjct: 153153 ttcacaaataaaattgtaac 153134
>emb|AL035653.12|HS67E13 Human DNA sequence from clone RP1-67E13 on chromosome 6p24.3-25.3 Contains a novel pseudogene, part of a novel gene and CpG islands, complete sequence Length = 133765 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gcccgtgttcttctcaccct 324 |||||||||||||||||||| Sbjct: 35385 gcccgtgttcttctcaccct 35366
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tcagcttcatcaataaccaa 595 |||||||||||||||||||| Sbjct: 1330180 tcagcttcatcaataaccaa 1330199
>emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 5/11 Length = 349723 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaaccacgttcacaaataaa 42 |||||||||||||||||||| Sbjct: 19250 gaaccacgttcacaaataaa 19231
>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains part of a novel gene similar to ATP8B1 (ATPase, Class I, type 8B, member 1), part of a novel gene similar to MCF2 (MCF.2 cell line derived transforming sequence) and two CpG islands, complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 caagtgcatcagcaaactcc 425 |||||||||||||||||||| Sbjct: 130032 caagtgcatcagcaaactcc 130013
>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence Length = 173677 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gaaccagacaggccaaagtg 103 |||||||||||||||||||| Sbjct: 86823 gaaccagacaggccaaagtg 86804
>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence Length = 207840 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 151020 tgcagtaactctccatccca 151039
>gb|AC091700.4| Homo sapiens chromosome 15 clone CTD-2173F13 map 15q22, complete sequence Length = 97653 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tcagcttcatcaataaccaa 595 |||||||||||||||||||| Sbjct: 56427 tcagcttcatcaataaccaa 56446
>gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map 15q22, complete sequence Length = 195554 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tcagcttcatcaataaccaa 595 |||||||||||||||||||| Sbjct: 171705 tcagcttcatcaataaccaa 171724
>gb|AC158390.2| Mus musculus BAC clone RP24-401O3 from chromosome 14, complete sequence Length = 121889 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 caaataaaattgtaacttat 54 |||||||||||||||||||| Sbjct: 83113 caaataaaattgtaacttat 83132
>gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149754 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 cttgttcaccaagcacctga 546 |||||||||||||||||||| Sbjct: 120000 cttgttcaccaagcacctga 119981
>ref|NM_171985.2| Caenorhabditis elegans T21B10.7 (T21B10.7) mRNA, complete cds Length = 1932 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 acacaaagggcatcatggag 568 |||||||||||||||||||| Sbjct: 1179 acacaaagggcatcatggag 1160
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ctcaagtgcatcagcaaactcctt 427 ||||||||| |||||||||||||| Sbjct: 868798 ctcaagtgcttcagcaaactcctt 868775
>emb|BX890619.6| Zebrafish DNA sequence from clone CH211-288M1, complete sequence Length = 141754 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 caagtgcatcagcaaactcc 425 |||||||||||||||||||| Sbjct: 141688 caagtgcatcagcaaactcc 141669
>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14, complete sequence Length = 166194 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 caagtgcatcagcaaactcc 425 |||||||||||||||||||| Sbjct: 126671 caagtgcatcagcaaactcc 126690
>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177364 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 158962 tgcagtaactctccatccca 158943
>gb|AC019197.7| Homo sapiens BAC clone RP11-361O8 from 2, complete sequence Length = 178255 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atatcatcaatcttcaagat 196 |||||||||||||||||||| Sbjct: 148313 atatcatcaatcttcaagat 148294
>gb|AC004860.1|AC004860 Homo sapiens PAC clone RP4-691L7 from 7, complete sequence Length = 136225 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gaaccagacaggccaaagtg 103 |||||||||||||||||||| Sbjct: 95230 gaaccagacaggccaaagtg 95249
>emb|BX119967.5| Mouse DNA sequence from clone RP23-362M13 on chromosome X, complete sequence Length = 59836 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 31767 tgcagtaactctccatccca 31786
>emb|BX276118.7| Mouse DNA sequence from clone RP23-452O23 on chromosome X, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 25026 tgcagtaactctccatccca 25045
>gb|AC145087.14| Mus musculus chromosome 1, clone RP23-255P18, complete sequence Length = 187470 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 171987 tgcagtaactctccatccca 171968
>dbj|AK121961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107O09, full insert sequence Length = 3228 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ctcaagtgcatcagcaaactcctt 427 ||||||||| |||||||||||||| Sbjct: 813 ctcaagtgcttcagcaaactcctt 790
>emb|Z68318.2|CET21B10 Caenorhabditis elegans Cosmid T21B10, complete sequence Length = 31801 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 acacaaagggcatcatggag 568 |||||||||||||||||||| Sbjct: 430 acacaaagggcatcatggag 411
>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence Length = 185014 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 gacacaaagggcatcatgga 567 |||||||||||||||||||| Sbjct: 32683 gacacaaagggcatcatgga 32664
>emb|CT025159.8| Mouse DNA sequence from clone RP23-336K1 on chromosome 14, complete sequence Length = 198530 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 caaataaaattgtaacttat 54 |||||||||||||||||||| Sbjct: 50922 caaataaaattgtaacttat 50903
>gb|U25632.1|CEU25632 Caenorhabditis elegans chaperonin CCT-2 (cct-2) mRNA, complete cds Length = 1590 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 acacaaagggcatcatggag 568 |||||||||||||||||||| Sbjct: 1169 acacaaagggcatcatggag 1150
>gb|AC153547.3| Mus musculus 10 BAC RP23-429B12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206024 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tgcagtaactctccatccca 449 |||||||||||||||||||| Sbjct: 187840 tgcagtaactctccatccca 187859
>emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chromosome X, complete sequence Length = 221439 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tcaatcttcaagatcattct 202 |||||||||||||||||||| Sbjct: 21770 tcaatcttcaagatcattct 21751
>emb|AL671991.5| Mouse DNA sequence from clone RP23-343L7 on chromosome X, complete sequence Length = 211866 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aatacagccctaaaaaggat 143 |||||||||||||||||||| Sbjct: 140708 aatacagccctaaaaaggat 140689 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,933,400 Number of Sequences: 3902068 Number of extensions: 4933400 Number of successful extensions: 89973 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 89611 Number of HSP's gapped (non-prelim): 353 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
