| Clone Name | rbags14m17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 Score = 531 bits (268), Expect = e-148 Identities = 443/500 (88%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 169 tgcattaagaagccttcatgtcatcgagtccaacactggccaggaagtcatgattctcct 228 |||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| | Sbjct: 754 tgcattaagaagccttcagatcatcaagtccaacactggccagaaaatcatgattctctt 695 Query: 229 tgagaaagggataaaaggtggtgcagaatttctcaatgtctgctttgatgtcacccgttc 288 ||||||| || |||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 694 tgagaaaagggtaaaaggtcgtgcagaatttctcgatatcagcttttatgtcacccgttc 635 Query: 289 cgctaattacctccataaatttatctttgttaggagcaagcttcatagcaaccgtaaaac 348 | ||||| |||||||||||||| ||| | ||||||||||||||||| || || ||||||| Sbjct: 634 cactaatgacctccataaatttctctctattaggagcaagcttcattgccactgtaaaac 575 Query: 349 tggagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatg 408 | || ||||| ||||| ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 574 tagaactggcaagccaaccatgccatttcttcagagttttggtatatgaatcagtacaag 515 Query: 409 cttgactcatagtccagtctggatggtcaagcagattacggaacagttcaacaaggaagt 468 |||||||||||||||||||| |||| |||||||| |||||||| | |||||||||||||| Sbjct: 514 cttgactcatagtccagtcttgatgctcaagcaggttacggaataattcaacaaggaagt 455 Query: 469 ccatggcccctcgtgagccatagaagtccattggtgcagcttgatgaaccttttgcggtc 528 |||| | ||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 454 ccatag-ccctcgtgagccacagaagtccatttgtgcagcttgacgaaccttttgcagtc 396 Query: 529 ttcttttcaacttcttcttggaccatggtgtacaagtgctcatattttgctgggtctgaa 588 || |||| ||| ||||| || |||||| ||||||| ||||||||||||| |||||||||| Sbjct: 395 ttgttttgaacctcttcctgaaccatgctgtacaattgctcatattttgatgggtctgaa 336 Query: 589 gagtacttgttctccaacctcgtgatatttcctccaatatcactcttcacaattgccata 648 || || || || |||| |||||||||||| || ||||| ||||||||||||| ||||||| Sbjct: 335 gaatatttattttccagcctcgtgatattaccaccaatgtcactcttcacaagtgccata 276 Query: 649 gcagcaccaaatttatccaa 668 ||||| |||||||||||||| Sbjct: 275 gcagctccaaatttatccaa 256
>dbj|AK061679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H10, full insert sequence Length = 978 Score = 523 bits (264), Expect = e-145 Identities = 442/500 (88%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 169 tgcattaagaagccttcatgtcatcgagtccaacactggccaggaagtcatgattctcct 228 |||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| | Sbjct: 754 tgcattaagaagccttcagatcatcaagtccaacactggccagaaaatcatgattctctt 695 Query: 229 tgagaaagggataaaaggtggtgcagaatttctcaatgtctgctttgatgtcacccgttc 288 ||||||| || |||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 694 tgagaaaagggtaaaaggtcgtgcagaatttctcgatatcagcttttatgtcacccgttc 635 Query: 289 cgctaattacctccataaatttatctttgttaggagcaagcttcatagcaaccgtaaaac 348 | ||||| |||||||||||||| ||| | ||||||||||||||||| || || ||||||| Sbjct: 634 cactaatgacctccataaatttctctctattaggagcaagcttcattgccactgtaaaac 575 Query: 349 tggagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatg 408 | || ||||| ||||| ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 574 tagaactggcaagccaaccatgccatttcttcagagttttggtatatgaatcagtacaag 515 Query: 409 cttgactcatagtccagtctggatggtcaagcagattacggaacagttcaacaaggaagt 468 |||||||||||||||||||| |||| |||||||| |||||||| | |||||||||||||| Sbjct: 514 cttgactcatagtccagtcttgatgctcaagcaggttacggaataattcaacaaggaagt 455 Query: 469 ccatggcccctcgtgagccatagaagtccattggtgcagcttgatgaaccttttgcggtc 528 |||| | ||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 454 ccatag-ccctcgtgagccacagaagtccatttgtgcagcttgacgaaccttttgcagtc 396 Query: 529 ttcttttcaacttcttcttggaccatggtgtacaagtgctcatattttgctgggtctgaa 588 || |||| | | ||||| || |||||| ||||||| ||||||||||||| |||||||||| Sbjct: 395 ttgttttgagcctcttcctgaaccatgctgtacaattgctcatattttgatgggtctgaa 336 Query: 589 gagtacttgttctccaacctcgtgatatttcctccaatatcactcttcacaattgccata 648 || || || || |||| |||||||||||| || ||||| ||||||||||||| ||||||| Sbjct: 335 gaatatttattttccagcctcgtgatattaccaccaatgtcactcttcacaagtgccata 276 Query: 649 gcagcaccaaatttatccaa 668 ||||| |||||||||||||| Sbjct: 275 gcagctccaaatttatccaa 256
>gb|BT024039.1| Zea mays clone EL01N0429A01 mRNA sequence Length = 807 Score = 394 bits (199), Expect = e-106 Identities = 419/491 (85%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 177 gaagccttcatgtcatcgagtccaacactggccaggaagtcatgattctccttgagaaag 236 ||||||||||| ||||| || ||||| || ||||| || || ||||| || |||||||| Sbjct: 559 gaagccttcatatcatcaagaccaacgctcgccagaaactcgtgattttctttgagaaaa 500 Query: 237 ggataaaaggtggtgcagaatttctcaatgtctgctttgatgtcacccgttccgctaatt 296 ||| | ||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 499 ggagagaaggttgtgcaaaatttctcaatatctgcattgatatcaccagttccactaatg 440 Query: 297 acctccataaatttatctttgttaggagcaagcttcatagcaaccgtaaaactggagctg 356 |||||||| ||||||||| | ||||||| |||||||| || ||||||||||| || ||| Sbjct: 439 acctccatgaatttatctctattaggagagagcttcatggccaccgtaaaactagaactg 380 Query: 357 gcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgcttgactc 416 || ||||||||||| |||||||||| || || |||||||||||||| || |||||| || Sbjct: 379 gcaagccagccatgaaatttcttcagggtcttggtgtatgaatcagtgcaagcttgagtc 320 Query: 417 atagtccagtctggatggtcaagcagattacggaacagttcaacaaggaagtccatggcc 476 || |||||||||||||| |||||||| |||||||||| ||||||||||| ||||||| | Sbjct: 319 atggtccagtctggatgctcaagcaggttacggaacaactcaacaaggaaatccatgg-c 261 Query: 477 cctcgtgagccatagaagtccattggtgcagcttgatgaaccttttgcggtcttcttttc 536 |||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| |||| Sbjct: 260 cctcgtgagccacagaagaccatttgtgcagcttgaggaacctttcgcggtcttgttttg 201 Query: 537 aacttcttcttggaccatggtgtacaagtgctcatattttgctgggtctgaagagtactt 596 ||||||||| || |||||| |||||||||| |||| |||| ||| |||||||| ||||| Sbjct: 200 aacttcttcctgaaccatgctgtacaagtgtccatactttgatggatctgaagaatactt 141 Query: 597 gttctccaacctcgtgatatttcctccaatatcactcttcacaattgccatagcagcacc 656 ||| |||| ||| |||||||| || | |||||| |||| ||||||||||||||||| || Sbjct: 140 gttttccagccttgtgatattgccgctgatatcattctttacaattgccatagcagctcc 81 Query: 657 aaatttatcca 667 ||||||||||| Sbjct: 80 aaatttatcca 70
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 337 caaccgtaaaactggagctggcgagccagccatgccatttcttcagagtttttgtgtatg 396 |||| |||||||| || ||||| ||||| ||||||||||||||||||||||| || |||| Sbjct: 24801215 caactgtaaaactagaactggcaagccaaccatgccatttcttcagagttttggtatatg 24801156 Query: 397 aatcagtacatgcttgactcatagtccagtctggatggtcaagcagattacggaacagtt 456 |||||||||| ||||||||||||||||||||| |||| |||||||| |||||||| | || Sbjct: 24801155 aatcagtacaagcttgactcatagtccagtcttgatgctcaagcaggttacggaataatt 24801096 Query: 457 caacaaggaagtccatggccc 477 |||||||||||||||| |||| Sbjct: 24801095 caacaaggaagtccatagccc 24801075 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 216 tcatgattctccttgagaaagggataaaaggtggtgcagaatttctcaatgtctgctttg 275 ||||||||||| |||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 24801750 tcatgattctctttgagaaaagggtaaaaggtcgtgcagaatttctcgatatcagctttt 24801691 Query: 276 atgtcacccgttccgctaattacctccataaatttatctttgttaggagcaagcttcat 334 |||||||||||||| ||||| |||||||||||||| ||| | ||||||||||||||||| Sbjct: 24801690 atgtcacccgttccactaatgacctccataaatttctctctattaggagcaagcttcat 24801632 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 477 cctcgtgagccatagaagtccattggtgcagcttgatgaaccttttgcggtcttcttttc 536 |||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 24800995 cctcgtgagccacagaagtccatttgtgcagcttgacgaaccttttgcagtcttgttttg 24800936 Query: 537 aacttcttcttggaccatggtgtacaagtgctcatattttgctgggtctgaaga 590 ||| ||||| || |||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 24800935 aacctcttcctgaaccatgctgtacaattgctcatattttgatgggtctgaaga 24800882 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 609 cgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 ||||||||| || ||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 24800652 cgtgatattaccaccaatgtcactcttcacaagtgccatagcagctccaaatttatc 24800596 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 169 tgcattaagaagccttcatgtcatcgagtccaacactggcc 209 |||||||||||||||||| ||||| ||||||||||||||| Sbjct: 24801886 tgcattaagaagccttcagatcatcaagtccaacactggcc 24801846 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cataaatttatctttgttag 321 |||||||||||||||||||| Sbjct: 30753977 cataaatttatctttgttag 30753996
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 337 caaccgtaaaactggagctggcgagccagccatgccatttcttcagagtttttgtgtatg 396 |||| |||||||| || ||||| ||||| ||||||||||||||||||||||| || |||| Sbjct: 100863 caactgtaaaactagaactggcaagccaaccatgccatttcttcagagttttggtatatg 100804 Query: 397 aatcagtacatgcttgactcatagtccagtctggatggtcaagcagattacggaacagtt 456 |||||||||| ||||||||||||||||||||| |||| |||||||| |||||||| | || Sbjct: 100803 aatcagtacaagcttgactcatagtccagtcttgatgctcaagcaggttacggaataatt 100744 Query: 457 caacaaggaagtccatggccc 477 |||||||||||||||| |||| Sbjct: 100743 caacaaggaagtccatagccc 100723 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 216 tcatgattctccttgagaaagggataaaaggtggtgcagaatttctcaatgtctgctttg 275 ||||||||||| |||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 101398 tcatgattctctttgagaaaagggtaaaaggtcgtgcagaatttctcgatatcagctttt 101339 Query: 276 atgtcacccgttccgctaattacctccataaatttatctttgttaggagcaagcttcat 334 |||||||||||||| ||||| |||||||||||||| ||| | ||||||||||||||||| Sbjct: 101338 atgtcacccgttccactaatgacctccataaatttctctctattaggagcaagcttcat 101280 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 477 cctcgtgagccatagaagtccattggtgcagcttgatgaaccttttgcggtcttcttttc 536 |||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 100643 cctcgtgagccacagaagtccatttgtgcagcttgacgaaccttttgcagtcttgttttg 100584 Query: 537 aacttcttcttggaccatggtgtacaagtgctcatattttgctgggtctgaaga 590 ||| ||||| || |||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 100583 aacctcttcctgaaccatgctgtacaattgctcatattttgatgggtctgaaga 100530 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 609 cgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 ||||||||| || ||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 100300 cgtgatattaccaccaatgtcactcttcacaagtgccatagcagctccaaatttatc 100244 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 169 tgcattaagaagccttcatgtcatcgagtccaacactggcc 209 |||||||||||||||||| ||||| ||||||||||||||| Sbjct: 101534 tgcattaagaagccttcagatcatcaagtccaacactggcc 101494
>dbj|AP006846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa283G08 Length = 38265 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 337 caaccgtaaaactggagctggcgagccagccatgccatttcttcagagtttttgtgtatg 396 |||| |||||||| || ||||| ||||| ||||||||||||||||||||||| || |||| Sbjct: 4579 caactgtaaaactagaactggcaagccaaccatgccatttcttcagagttttggtatatg 4520 Query: 397 aatcagtacatgcttgactcatagtccagtctggatggtcaagcagattacggaacagtt 456 |||||||||| ||||||||||||||||||||| |||| |||||||| |||||||| | || Sbjct: 4519 aatcagtacaagcttgactcatagtccagtcttgatgctcaagcaggttacggaataatt 4460 Query: 457 caacaaggaagtccatggccc 477 |||||||||||||||| |||| Sbjct: 4459 caacaaggaagtccatagccc 4439 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 216 tcatgattctccttgagaaagggataaaaggtggtgcagaatttctcaatgtctgctttg 275 ||||||||||| |||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 5114 tcatgattctctttgagaaaagggtaaaaggtcgtgcagaatttctcgatatcagctttt 5055 Query: 276 atgtcacccgttccgctaattacctccataaatttatctttgttaggagcaagcttcat 334 |||||||||||||| ||||| |||||||||||||| ||| | ||||||||||||||||| Sbjct: 5054 atgtcacccgttccactaatgacctccataaatttctctctattaggagcaagcttcat 4996 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 477 cctcgtgagccatagaagtccattggtgcagcttgatgaaccttttgcggtcttcttttc 536 |||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 4359 cctcgtgagccacagaagtccatttgtgcagcttgacgaaccttttgcagtcttgttttg 4300 Query: 537 aacttcttcttggaccatggtgtacaagtgctcatattttgctgggtctgaaga 590 ||| ||||| || |||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 4299 aacctcttcctgaaccatgctgtacaattgctcatattttgatgggtctgaaga 4246 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 609 cgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 ||||||||| || ||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 4016 cgtgatattaccaccaatgtcactcttcacaagtgccatagcagctccaaatttatc 3960 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 169 tgcattaagaagccttcatgtcatcgagtccaacactggcc 209 |||||||||||||||||| ||||| ||||||||||||||| Sbjct: 5250 tgcattaagaagccttcagatcatcaagtccaacactggcc 5210
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 608 tcgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 |||||||||| || ||||| ||||||||||||| |||||||||||| | ||||||||| Sbjct: 16231108 tcgtgatattaccaccaatgtcactcttcacaagtgccatagcagctctaaatttatc 16231165
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 608 tcgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 |||||||||| || ||||| ||||||||||||| |||||||||||| | ||||||||| Sbjct: 21286 tcgtgatattaccaccaatgtcactcttcacaagtgccatagcagctctaaatttatc 21343
>dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109M01, full insert sequence Length = 2519 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 608 tcgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 |||||||||| || ||||| ||||||||||||| |||||||||||| | ||||||||| Sbjct: 1894 tcgtgatattaccaccaatgtcactcttcacaagtgccatagcagctctaaatttatc 1837
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 609 cgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 ||||||||| || ||||| ||||||||||||| |||||||||||| | ||||||||| Sbjct: 21531190 cgtgatattaccaccaatgtcactcttcacaagtgccatagcagctctaaatttatc 21531134 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 629 cactcttcacaattgccatagcagc 653 |||||||||||| |||||||||||| Sbjct: 13742600 cactcttcacaagtgccatagcagc 13742624
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 609 cgtgatatttcctccaatatcactcttcacaattgccatagcagcaccaaatttatc 665 ||||||||| || ||||| ||||||||||||| |||||||||||| | ||||||||| Sbjct: 88374 cgtgatattaccaccaatgtcactcttcacaagtgccatagcagctctaaatttatc 88318
>ref|NM_201859.1| Arabidopsis thaliana unknown protein AT2G33470 transcript variant AT2G33470.2 mRNA, complete cds Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 351 gagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgct 410 |||||||||||||| || ||||||||||| || |||||| |||||| |||| ||| ||| Sbjct: 504 gagctggcgagccatccgtgccatttcttgagtgttttttggtatgagtcagcacaagct 445 Query: 411 tg 412 || Sbjct: 444 tg 443
>ref|NM_128907.2| Arabidopsis thaliana unknown protein AT2G33470 transcript variant AT2G33470.1 mRNA, complete cds Length = 981 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 351 gagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgct 410 |||||||||||||| || ||||||||||| || |||||| |||||| |||| ||| ||| Sbjct: 620 gagctggcgagccatccgtgccatttcttgagtgttttttggtatgagtcagcacaagct 561 Query: 411 tg 412 || Sbjct: 560 tg 559
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence Length = 152593 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 351 gagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgct 410 |||||||||||||| || ||||||||||| || |||||| |||||| |||| ||| ||| Sbjct: 80824 gagctggcgagccatccgtgccatttcttgagtgttttttggtatgagtcagcacaagct 80883 Query: 411 tg 412 || Sbjct: 80884 tg 80885
>gb|BT005674.1| Arabidopsis thaliana clone U50148 unknown protein (At2g33470) mRNA, complete cds Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 351 gagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgct 410 |||||||||||||| || ||||||||||| || |||||| |||||| |||| ||| ||| Sbjct: 431 gagctggcgagccatccgtgccatttcttgagtgttttttggtatgagtcagcacaagct 372 Query: 411 tg 412 || Sbjct: 371 tg 370
>gb|BT004207.1| Arabidopsis thaliana clone RAFL15-28-H11 (R50148) unknown protein (At2g33470) mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 351 gagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgct 410 |||||||||||||| || ||||||||||| || |||||| |||||| |||| ||| ||| Sbjct: 524 gagctggcgagccatccgtgccatttcttgagtgttttttggtatgagtcagcacaagct 465 Query: 411 tg 412 || Sbjct: 464 tg 463
>gb|AY085884.1| Arabidopsis thaliana clone 19302 mRNA, complete sequence Length = 945 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 351 gagctggcgagccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgct 410 |||||||||||||| || ||||||||||| || |||||| |||||| |||| ||| ||| Sbjct: 618 gagctggcgagccatccgtgccatttcttgagtgttttttggtatgagtcagcacaagct 559 Query: 411 tg 412 || Sbjct: 558 tg 557
>ref|NM_187035.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 321 ggagcaagcttcatagcaaccgtaaaactggagctggcgagccagccatgccatttcttc 380 ||||||||||| || ||||||| ||| || || || || ||||| || ||||||||||| Sbjct: 461 ggagcaagctttatggcaaccgaaaagcttgaactcgccagccatccgtgccatttcttg 402 Query: 381 agagtttt 388 |||||||| Sbjct: 401 agagtttt 394 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 443 attacggaacagttcaacaaggaagtccatggc 475 |||| |||||||| |||| |||||||||||||| Sbjct: 339 attatggaacagtgcaaccaggaagtccatggc 307
>ref|NM_179950.1| Arabidopsis thaliana ATP binding / microtubule motor AT2G37420 mRNA, complete cds Length = 3429 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 cttcttttcaacttcttcttg 548 ||||||||||||||||||||| Sbjct: 1463 cttcttttcaacttcttcttg 1443
>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence Length = 202146 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 catggtgtacaagtgctcata 572 ||||||||||||||||||||| Sbjct: 98483 catggtgtacaagtgctcata 98463
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 cttttcaacttcttcttggac 551 ||||||||||||||||||||| Sbjct: 81841 cttttcaacttcttcttggac 81861
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 cttttcaacttcttcttggac 551 ||||||||||||||||||||| Sbjct: 20115 cttttcaacttcttcttggac 20135
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 tatcactcttcacaattgcca 646 ||||||||||||||||||||| Sbjct: 167998 tatcactcttcacaattgcca 168018
>ref|XM_647817.1| Entamoeba histolytica HM-1:IMSS Ras GTPase activating protein, putative (100.t00030) partial mRNA Length = 2310 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 tgttttgatagacttattatt 60 ||||||||||||||||||||| Sbjct: 2047 tgttttgatagacttattatt 2067
>emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chromosome 13 Contains the 5' end of the FGF14 gene for fibroblast growth factor 14, a lipoyltransferase (LOC51601) pseudogene and a CpG island, complete sequence Length = 188696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 tatcactcttcacaattgcca 646 ||||||||||||||||||||| Sbjct: 18893 tatcactcttcacaattgcca 18913
>emb|AL356476.13| Human DNA sequence from clone RP11-655H13 on chromosome 10 Contains a mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5) pseudogene and a novel gene, complete sequence Length = 184510 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 acatgcttgactcatagtcca 424 ||||||||||||||||||||| Sbjct: 154862 acatgcttgactcatagtcca 154882
>emb|X71621.1|SCELM1AA S.cerevisiae genes ELM1 and PRI2 Length = 17564 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 12391 tcttcttttcaacttcttctt 12411
>gb|AC116158.5| Homo sapiens chromosome , clone RP11-102L12, complete sequence Length = 159236 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 attaagaagccttcatgtcat 192 ||||||||||||||||||||| Sbjct: 138153 attaagaagccttcatgtcat 138133
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 360 agccagccatgccatttcttcagagtttttgtgtatgaatcagtacatgcttg 412 |||||||||||||| ||||| ||||| || | || ||||||||||| ||||| Sbjct: 10350 agccagccatgccacttctttagagtcttgttataggaatcagtacaggcttg 10298
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 cggtcttcttttcaacttctt 544 ||||||||||||||||||||| Sbjct: 596202 cggtcttcttttcaacttctt 596182
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 cttcttttcaacttcttcttg 548 ||||||||||||||||||||| Sbjct: 71423 cttcttttcaacttcttcttg 71403
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ataaaatttgagaaaatagcaagac 137 |||||||||||||||| |||||||| Sbjct: 14220331 ataaaatttgagaaaaaagcaagac 14220355
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 443 attacggaacagttcaacaaggaagtccatggc 475 |||| |||||||| |||| |||||||||||||| Sbjct: 15168600 attatggaacagtgcaaccaggaagtccatggc 15168568
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 629 cactcttcacaattgccatagcagc 653 |||||||||||| |||||||||||| Sbjct: 149933 cactcttcacaagtgccatagcagc 149957
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 443 attacggaacagttcaacaaggaagtccatggc 475 |||| |||||||| |||| |||||||||||||| Sbjct: 35349 attatggaacagtgcaaccaggaagtccatggc 35317
>dbj|AK105492.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C02, full insert sequence Length = 1753 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 629 cactcttcacaattgccatagcagc 653 |||||||||||| |||||||||||| Sbjct: 1493 cactcttcacaagtgccatagcagc 1469
>emb|Z28044.1|SCYKL044W S.cerevisiae chromosome XI reading frame ORF YKL044w Length = 1668 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 1575 tcttcttttcaacttcttctt 1595
>emb|Z28043.1|SCYKL043W S.cerevisiae chromosome XI reading frame ORF YKL043w Length = 1832 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 12 tcttcttttcaacttcttctt 32
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ataaaatttgagaaaatagcaagac 137 |||||||||||||||| |||||||| Sbjct: 14174611 ataaaatttgagaaaaaagcaagac 14174635
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141067 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ataaaatttgagaaaatagcaagac 137 |||||||||||||||| |||||||| Sbjct: 15949 ataaaatttgagaaaaaagcaagac 15973
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ataaaatttgagaaaatagcaagac 137 |||||||||||||||| |||||||| Sbjct: 146872 ataaaatttgagaaaaaagcaagac 146896
>gb|AY949948.1| Saccharomyces cerevisiae strain YPS610 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949947.1| Saccharomyces cerevisiae strain YPS608 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949946.1| Saccharomyces cerevisiae strain YPS606 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949945.1| Saccharomyces cerevisiae strain YPS604 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949944.1| Saccharomyces cerevisiae strain YPS602 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949943.1| Saccharomyces cerevisiae strain YPS600 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949942.1| Saccharomyces cerevisiae strain YPS598 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949941.1| Saccharomyces cerevisiae strain YPS400 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949940.1| Saccharomyces cerevisiae strain YPS396 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949939.1| Saccharomyces cerevisiae strain YPH499 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949938.1| Saccharomyces cerevisiae strain Sgu52F PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949937.1| Saccharomyces cerevisiae strain Sgu52E PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949936.1| Saccharomyces cerevisiae strain ORM1-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949935.1| Saccharomyces cerevisiae strain MMW1-15h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949934.1| Saccharomyces cerevisiae strain MMW1-15 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949933.1| Saccharomyces cerevisiae strain MMW1-12 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949932.1| Saccharomyces cerevisiae strain MMW1-2h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949931.1| Saccharomyces cerevisiae strain MMW1-2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949930.1| Saccharomyces cerevisiae strain MMR2-5 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949929.1| Saccharomyces cerevisiae strain MM@2-3 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949928.1| Saccharomyces cerevisiae strain MMR2-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949927.1| Saccharomyces cerevisiae strain M7-8D PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949926.1| Saccharomyces cerevisiae strain M5-7B PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949925.1| Saccharomyces cerevisiae strain M5-7A PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949924.1| Saccharomyces cerevisiae strain M2-8 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949923.1| Saccharomyces cerevisiae strain M1-2A PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 29 tcttcttttcaacttcttctt 49
>gb|AY949922.1| Saccharomyces cerevisiae strain Fy93,5a PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949921.1| Saccharomyces cerevisiae strain Bb32(5) PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|AY949920.1| Saccharomyces cerevisiae strain Ba194 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 26 tcttcttttcaacttcttctt 46
>gb|U05241.1|SCU05241 Saccharomyces cerevisiae strain YPH1 putative transcription factor Phd1p (PHD1) gene, complete cds Length = 2020 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttctt 547 ||||||||||||||||||||| Sbjct: 607 tcttcttttcaacttcttctt 627
>ref|NM_119452.3| Arabidopsis thaliana ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1); transcription factor AT4G32980 (ATH1) mRNA, complete cds Length = 2268 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 326 cttcttttcaacttcttctt 345
>ref|NM_113399.1| Arabidopsis thaliana DNA binding AT3G24870 mRNA, complete cds Length = 5526 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gccagccatgccatttcttc 380 |||||||||||||||||||| Sbjct: 1745 gccagccatgccatttcttc 1726
>ref|NM_113400.3| Arabidopsis thaliana DNA binding AT3G24880 mRNA, complete cds Length = 6089 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gccagccatgccatttcttc 380 |||||||||||||||||||| Sbjct: 1760 gccagccatgccatttcttc 1741
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 623 caatatcactcttcacaatt 642 |||||||||||||||||||| Sbjct: 147057 caatatcactcttcacaatt 147038
>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence Length = 201427 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tgactcatagtccagtctggatgg 434 |||||||||||||||| ||||||| Sbjct: 51044 tgactcatagtccagtgtggatgg 51021
>gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214 of 244 of the complete genome Length = 11851 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tcttcttttcaacttcttct 546 |||||||||||||||||||| Sbjct: 10453 tcttcttttcaacttcttct 10472
>gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosome 7, complete sequence Length = 175150 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 ttcttttcaacttcttcttg 548 |||||||||||||||||||| Sbjct: 65743 ttcttttcaacttcttcttg 65724
>gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, complete sequence Length = 167218 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 aaaatttgagaaaatagcaagact 138 ||||||||||||| |||||||||| Sbjct: 91456 aaaatttgagaaattagcaagact 91433
>gb|AC132324.3| Mus musculus BAC clone RP24-270C24 from chromosome 13, complete sequence Length = 169258 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aataaaatttgagaaaatag 131 |||||||||||||||||||| Sbjct: 150855 aataaaatttgagaaaatag 150836
>gb|AC127281.3| Mus musculus BAC clone RP24-273C15 from chromosome 13, complete sequence Length = 154576 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aataaaatttgagaaaatag 131 |||||||||||||||||||| Sbjct: 47453 aataaaatttgagaaaatag 47434
>gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complete sequence Length = 150507 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tgactcatagtccagtctggatgg 434 |||||||||||||||| ||||||| Sbjct: 15040 tgactcatagtccagtgtggatgg 15063
>ref|XM_646239.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (170.t00017) partial mRNA Length = 696 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 aaatttatctttgttaggag 324 |||||||||||||||||||| Sbjct: 378 aaatttatctttgttaggag 397
>ref|XM_646996.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (133.t00008) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 63 cttcttttcaacttcttctt 44
>emb|CR730554.1|CNS0GQN3 Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 595 tgcttgactcatagtccagt 614
>emb|CR727607.2|CNS0GOD9 Tetraodon nigroviridis full-length cDNA Length = 1331 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 605 tgcttgactcatagtccagt 624
>emb|CR703130.2|CNS0G5HI Tetraodon nigroviridis full-length cDNA Length = 1008 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 527 tgcttgactcatagtccagt 546
>emb|CR687850.2|CNS0FTP2 Tetraodon nigroviridis full-length cDNA Length = 1120 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 654 tgcttgactcatagtccagt 673
>emb|CR684165.2|CNS0FQUP Tetraodon nigroviridis full-length cDNA Length = 953 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 225 tgcttgactcatagtccagt 244
>emb|CR661825.2|CNS0F9MV Tetraodon nigroviridis full-length cDNA Length = 1041 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 314 tgcttgactcatagtccagt 333
>emb|CR657762.1|CNS0F6I0 Tetraodon nigroviridis full-length cDNA Length = 1311 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 581 tgcttgactcatagtccagt 600
>emb|CR642978.2|CNS0EV3C Tetraodon nigroviridis full-length cDNA Length = 1080 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgcttgactcatagtccagt 426 |||||||||||||||||||| Sbjct: 370 tgcttgactcatagtccagt 389
>gb|AC163499.2| Mus musculus chromosome 5, clone RP23-250F1, complete sequence Length = 155609 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ataaaatttgagaaaatagcaaga 136 ||||||||||||||||||| |||| Sbjct: 3767 ataaaatttgagaaaataggaaga 3744
>emb|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 Contains a calmodulin 2 (phosphorylase kinase, delta) (CALM2) pseudogene, complete sequence Length = 139444 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 605 acctcgtgatatttcctccaatat 628 |||| ||||||||||||||||||| Sbjct: 95311 accttgtgatatttcctccaatat 95288
>emb|Z83320.1|ATZ83320 A.thaliana partial ATH1 gene Length = 10072 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 8541 cttcttttcaacttcttctt 8560
>emb|X80127.1|ATHIGEN A.thaliana AtH1 gene Length = 4878 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 1635 cttcttttcaacttcttctt 1654
>gb|AY072174.1| Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds Length = 2277 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 328 cttcttttcaacttcttctt 347
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 gcttgatgaaccttttgcgg 526 |||||||||||||||||||| Sbjct: 1483789 gcttgatgaaccttttgcgg 1483808
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 139475 cttcttttcaacttcttctt 139456
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 48779 cttcttttcaacttcttctt 48760
>gb|AC008916.7| Homo sapiens chromosome 5 clone CTD-2271P9, complete sequence Length = 133862 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aataaaatttgagaaaatag 131 |||||||||||||||||||| Sbjct: 32245 aataaaatttgagaaaatag 32226
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tggtgcagcttgatgaacct 519 |||||||||||||||||||| Sbjct: 3543799 tggtgcagcttgatgaacct 3543780
>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete sequence Length = 131417 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ccataaatttatctttgtta 320 |||||||||||||||||||| Sbjct: 84860 ccataaatttatctttgtta 84879
>emb|BX826894.1|CNS0A4MQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2123 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cttcttttcaacttcttctt 547 |||||||||||||||||||| Sbjct: 184 cttcttttcaacttcttctt 203
>dbj|AP006346.1| Marsupenaeus japonicus mitochondrial DNA, complete genome Length = 15968 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 tatttcctccaatatcactc 633 |||||||||||||||||||| Sbjct: 1163 tatttcctccaatatcactc 1182
>gb|AC084571.1|CBRG39J22 Caenorhabditis briggsae cosmid G39J22, complete sequence Length = 41637 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 tcaacttcttcttggaccat 554 |||||||||||||||||||| Sbjct: 13754 tcaacttcttcttggaccat 13773
>gb|AC116849.11| Mus musculus chromosome 19, clone RP24-395F1, complete sequence Length = 168486 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 623 caatatcactcttcacaatt 642 |||||||||||||||||||| Sbjct: 22535 caatatcactcttcacaatt 22516
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cataaatttatctttgttag 321 |||||||||||||||||||| Sbjct: 94124 cataaatttatctttgttag 94143
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gccagccatgccatttcttc 380 |||||||||||||||||||| Sbjct: 65045 gccagccatgccatttcttc 65064 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gccagccatgccatttcttc 380 |||||||||||||||||||| Sbjct: 53786 gccagccatgccatttcttc 53805
>gb|AC155305.2| Mus musculus BAC clone RP24-182I21 from 12, complete sequence Length = 172724 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ccataaatttatctttgtta 320 |||||||||||||||||||| Sbjct: 12035 ccataaatttatctttgtta 12054
>gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, complete sequence Length = 159591 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 atttcttcagagtttttgtgtatg 396 |||||||||| ||||||||||||| Sbjct: 142675 atttcttcagtgtttttgtgtatg 142652
>gb|AC147891.2| Xenopus tropicalis clone CH216-2E23, complete sequence Length = 209003 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atttatctttgttaggagca 326 |||||||||||||||||||| Sbjct: 166370 atttatctttgttaggagca 166389
>gb|AC101850.8| Mus musculus chromosome 5, clone RP23-269D16, complete sequence Length = 184289 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ataaaatttgagaaaatagcaaga 136 ||||||||||||||||||| |||| Sbjct: 95823 ataaaatttgagaaaataggaaga 95800
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aattacctccataaatttat 312 |||||||||||||||||||| Sbjct: 2252598 aattacctccataaatttat 2252617
>gb|U67077.1|XLU67077 Xenopus laevis zing finger protein XFDL141 gene, complete cds Length = 5163 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agtccaacactggccaggaa 214 |||||||||||||||||||| Sbjct: 4847 agtccaacactggccaggaa 4828
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 tgatatttcctccaatatca 630 |||||||||||||||||||| Sbjct: 114778 tgatatttcctccaatatca 114759 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,788,979 Number of Sequences: 3902068 Number of extensions: 6788979 Number of successful extensions: 132553 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131961 Number of HSP's gapped (non-prelim): 589 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)