ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14m14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EGFL9_HUMAN (Q6UY11) EGF-like domain-containing protein 9 precur... 31 3.3
2EGFL9_MOUSE (Q8K1E3) EGF-like domain-containing protein 9 precur... 31 3.3
3YLK2_CAEEL (P41950) Hypothetical protein D1044.2 precursor 29 9.5

>EGFL9_HUMAN (Q6UY11) EGF-like domain-containing protein 9 precursor (Multiple|
           EGF-like domain protein 9)
          Length = 383

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 209 LQQGCLMPENHTTRLHAKNEYIYCTMVPKCIRISQTSHGRCYLAWMCL 352
           L  GC  P+  + R     E ++C    +C+R+    HG C+  W C+
Sbjct: 35  LAHGCCAPDG-SCRCDPGWEGLHCE---RCVRMPGCQHGTCHQPWQCI 78



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>EGFL9_MOUSE (Q8K1E3) EGF-like domain-containing protein 9 precursor (Multiple|
           EGF-like domain protein 9) (Endothelial cell-specific
           protein S-1)
          Length = 382

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 209 LQQGCLMPENHTTRLHAKNEYIYCTMVPKCIRISQTSHGRCYLAWMCL 352
           L  GC  P+  + R     E ++C    +C+R+    HG C+  W C+
Sbjct: 35  LAHGCCAPDG-SCRCDPGWEGLHCE---RCVRMPGCQHGTCHQPWQCI 78



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>YLK2_CAEEL (P41950) Hypothetical protein D1044.2 precursor|
          Length = 1090

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 16/62 (25%), Positives = 23/62 (37%)
 Frame = +1

Query: 166 CLCKGRHEGHGMNNTATGVLDAGKSHHQTARKE*VYILYNGAKMYKDQSNQSWQMLSSLD 345
           C+CK    G G N+ +   L    +HHQ  RK+               S   W +   L 
Sbjct: 435 CMCKEGFSGDGQNDCSQSFLFQYDTHHQLPRKK--------------NSKMEWNLKKPLK 480

Query: 346 VF 351
           +F
Sbjct: 481 IF 482


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,156,728
Number of Sequences: 219361
Number of extensions: 1852460
Number of successful extensions: 3581
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3581
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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