ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14m14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 4e-82
2ref|NM_190541.1| Oryza sativa (japonica cultivar-group), predic... 303 4e-79
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
4dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
5ref|XM_475363.1| Oryza sativa (japonica cultivar-group), predic... 70 9e-09
6gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 70 9e-09
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
8emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 ... 68 4e-08
9gb|AY821694.1| Crithopsis delileana beta amylase gene, partial c... 56 1e-04
10gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 56 1e-04
11emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene 52 0.002
12dbj|AB183299.1| Triticum aestivum WHLP gene for ribosomal L14 pr... 52 0.002
13gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete se... 50 0.009
14emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin 50 0.009
15gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B... 48 0.034
16gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 48 0.034
17gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch s... 48 0.034
18gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene,... 48 0.034
19gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-l... 48 0.034
20gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-l... 48 0.034
21gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-lik... 48 0.034
22gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ... 48 0.034
23gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, c... 48 0.034
24gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 46 0.13
25gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, com... 46 0.13
26gb|AC022730.7| Homo sapiens chromosome 8, clone RP11-333A23, com... 46 0.13
27gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 46 0.13
28gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 46 0.13
29gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, compl... 44 0.53
30gb|AC026316.16| Homo sapiens 3 BAC RP11-373E16 (Roswell Park Can... 44 0.53
31dbj|AP000435.5| Homo sapiens genomic DNA, chromosome 11q clone:C... 44 0.53
32gb|AC115947.8| Mus musculus chromosome 5, clone RP24-560A18, com... 42 2.1
33gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 42 2.1
34gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 42 2.1
35emb|CR847804.27| Zebrafish DNA sequence from clone DKEY-85C24 in... 42 2.1
36emb|CR769785.19| Zebrafish DNA sequence from clone DKEY-1N3 in l... 42 2.1
37emb|Z74696.1|HS203C2 Human DNA sequence from clone RP1-203C2 on ... 42 2.1
38emb|AL592163.1| Human DNA sequence from clone RP13-237P14 on chr... 42 2.1
39emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7... 42 2.1
40gb|AC063923.21| Homo sapiens 3 BAC RP11-59E19 (Roswell Park Canc... 42 2.1
41gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, com... 42 2.1
42gb|AC158783.5| Mus musculus chromosome 5, clone RP23-144P3, comp... 42 2.1
43gb|AC008652.6| Homo sapiens chromosome 5 clone CTB-18F1, complet... 42 2.1
44gb|AF172082.1|AF172082 Homo sapiens HPC1 locus clone 173P17 geno... 42 2.1
45emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAR... 42 2.1
46gb|M65109.1|RABRG1A Rabbit glycogen-associated protein phosphata... 42 2.1
47gb|AY821703.1| Henrardia persica beta amylase gene, partial cds;... 40 8.3
48gb|DQ217934.1| Homo sapiens C-C chemokine receptor type 5 (CCR5)... 40 8.3
49gb|U41276.1| Caenorhabditis elegans cosmid C52B11, complete sequ... 40 8.3
50gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ... 40 8.3
51gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochr... 40 8.3
52gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p... 40 8.3
53emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box prote... 40 8.3
54gb|AC131782.3| Mus musculus BAC clone RP24-361A10 from chromosom... 40 8.3
55gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, c... 40 8.3
56emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromo... 40 8.3
57ref|XM_449308.1| Candida glabrata CBS138, CAGL0L12408g partial mRNA 40 8.3
58gb|AC129327.4| Mus musculus BAC clone RP23-159J2 from chromosome... 40 8.3
59gb|AC122874.2| Mus musculus BAC clone RP23-111G16 from 6, comple... 40 8.3
60gb|AC073903.8| Homo sapiens BAC clone RP11-564F5 from 7, complet... 40 8.3
61emb|AL355377.25| Human DNA sequence from clone RP11-392A14 on ch... 40 8.3
62emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 i... 40 8.3
63emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 8.3
64gb|AC078854.16| Homo sapiens 3q BAC RP11-480B17 (Roswell Park Ca... 40 8.3
65emb|BX470127.2| Mouse DNA sequence from clone RP24-280A6 on chro... 40 8.3
66emb|BX072541.1| Mouse DNA sequence from clone RP23-189G9 on chro... 40 8.3
67gb|AC098613.2| Homo sapiens chromosome 3 clone RP11-24F11, compl... 40 8.3
68gb|AC113406.2| Homo sapiens chromosome 5 clone RP11-471O19, comp... 40 8.3
69gb|AC114964.2| Homo sapiens chromosome 5 clone RP11-275B7, compl... 40 8.3
70dbj|AK163072.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 8.3
71gb|AC010389.8| Homo sapiens chromosome 5 clone CTD-2077I5, compl... 40 8.3
72gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome... 40 8.3
73gb|AC020982.6| Homo sapiens chromosome 5 clone RP1-255M24, compl... 40 8.3
74gb|S80206.1| fibronectin {3' region} [rabbits, renal cortex, mRN... 40 8.3
75gb|AC155647.14| Mus musculus 6 BAC RP24-151A23 (Roswell Park Can... 40 8.3
76gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complet... 40 8.3
77gb|AC106894.4| Homo sapiens BAC clone RP11-141E13 from 4, comple... 40 8.3
78gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, com... 40 8.3
79gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosom... 40 8.3
80gb|U29095.1|U29095 Triticum aestivum serine-threonine protein ki... 40 8.3
81gb|AC159315.4| Mus musculus BAC clone RP23-86H21 from chromosome... 40 8.3
82gb|AC149890.2| Xenopus tropicalis clone ISB-181I24, complete seq... 40 8.3
83gb|U95626.1|HSU95626 Homo sapiens ccr2b (ccr2), ccr2a (ccr2), cc... 40 8.3
84gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosom... 40 8.3
85emb|AL626805.14| Mouse DNA sequence from clone RP23-118K16 on ch... 40 8.3
86emb|AL627182.22| Mouse DNA sequence from clone RP23-32K12 on chr... 40 8.3
87emb|AL732473.12| Mouse DNA sequence from clone RP23-130J8 on chr... 40 8.3
88dbj|AB024006.1| Hordeum vulgare naat-B and naat-A genes for nico... 40 8.3 
>dbj|AK060210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B05, full
            insert sequence
          Length = 1678

 Score =  313 bits (158), Expect = 4e-82
 Identities = 256/286 (89%), Gaps = 2/286 (0%)
 Strand = Plus / Minus

                                                                        
Query: 326  agatgctatctagcctggatgtgtttagagtgttctgatttatttggatggcacatgcag 385
            |||||||||||||||||||||  |||||||||||||||||| ||||   |||||||||||
Sbjct: 1152 agatgctatctagcctggatggatttagagtgttctgatttgtttgagcggcacatgcag 1093

                                                                        
Query: 386  tcagggcttggaaatgtgtatacagattcatttgctctttttatttgaatacccttggca 445
            || |||| |||||| ||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 1092 tcggggcatggaaaggtgtatatagattcatttgctcttttcatttcaatacccttggca 1033

                                                                        
Query: 446  tcactgtgtgatctcatactaagcagcttgacgttttagtgacttccatccgatacgtgg 505
            || ||||||| ||||||| | | || | |||||||| |||||||||||||||||||||||
Sbjct: 1032 tcgctgtgtgttctcatattcaccaac-tgacgtttcagtgacttccatccgatacgtgg 974

                                                                        
Query: 506  actgtcaaagagtatggccaatcttcttttatcaggcttaattgtcttttgagtggccac 565
            ||| || ||||||||||| ||||||||||||||||||||||||||| || || || ||||
Sbjct: 973  actatcgaagagtatggctaatcttcttttatcaggcttaattgtc-ttcgaatgaccac 915

                                                          
Query: 566  catacaagtatcttctatgaccaagaaggaaatgaggaaaatttcc 611
            |||| | |||||| ||||||||||||||||||||||||||||||||
Sbjct: 914  cataaatgtatctcctatgaccaagaaggaaatgaggaaaatttcc 869



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 237  atcacaccaccagactgcacgcaaagaatgag 268
            ||||||||||||||| ||| ||||||||||||
Sbjct: 1238 atcacaccaccagacggcaagcaaagaatgag 1207
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>ref|NM_190541.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1734

 Score =  303 bits (153), Expect = 4e-79
 Identities = 251/281 (89%), Gaps = 2/281 (0%)
 Strand = Plus / Minus

                                                                        
Query: 331  ctatctagcctggatgtgtttagagtgttctgatttatttggatggcacatgcagtcagg 390
            ||||||||||||||||  |||||||||||||||||| ||||   ||||||||||||| ||
Sbjct: 1734 ctatctagcctggatggatttagagtgttctgatttgtttgagcggcacatgcagtcggg 1675

                                                                        
Query: 391  gcttggaaatgtgtatacagattcatttgctctttttatttgaatacccttggcatcact 450
            || |||||| ||||||| |||||||||||||||||| |||| ||||||||||||||| ||
Sbjct: 1674 gcatggaaaggtgtatatagattcatttgctcttttcatttcaatacccttggcatcgct 1615

                                                                        
Query: 451  gtgtgatctcatactaagcagcttgacgttttagtgacttccatccgatacgtggactgt 510
            ||||| ||||||| | | || | |||||||| |||||||||||||||||||||||||| |
Sbjct: 1614 gtgtgttctcatattcaccaac-tgacgtttcagtgacttccatccgatacgtggactat 1556

                                                                        
Query: 511  caaagagtatggccaatcttcttttatcaggcttaattgtcttttgagtggccaccatac 570
            | ||||||||||| ||||||||||||||||||||||||||| || || || |||||||| 
Sbjct: 1555 cgaagagtatggctaatcttcttttatcaggcttaattgtc-ttcgaatgaccaccataa 1497

                                                     
Query: 571  aagtatcttctatgaccaagaaggaaatgaggaaaatttcc 611
            | |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1496 atgtatctcctatgaccaagaaggaaatgaggaaaatttcc 1456
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  170 bits (86), Expect = 3e-39
 Identities = 150/170 (88%), Gaps = 1/170 (0%)
 Strand = Plus / Plus

                                                                            
Query: 326      agatgctatctagcctggatgtgtttagagtgttctgatttatttggatggcacatgcag 385
                |||||||||||||||||||||  |||||||||||||||||| ||||   |||||||||||
Sbjct: 36099193 agatgctatctagcctggatggatttagagtgttctgatttgtttgagcggcacatgcag 36099252

                                                                            
Query: 386      tcagggcttggaaatgtgtatacagattcatttgctctttttatttgaatacccttggca 445
                || |||| |||||| ||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 36099253 tcggggcatggaaaggtgtatatagattcatttgctcttttcatttcaatacccttggca 36099312

                                                                  
Query: 446      tcactgtgtgatctcatactaagcagcttgacgttttagtgacttccatc 495
                || ||||||| ||||||| | | || | |||||||| |||||||||||||
Sbjct: 36099313 tcgctgtgtgttctcatattcaccaac-tgacgtttcagtgacttccatc 36099361



 Score =  145 bits (73), Expect = 2e-31
 Identities = 107/117 (91%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                            
Query: 495      ccgatacgtggactgtcaaagagtatggccaatcttcttttatcaggcttaattgtcttt 554
                |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 36099496 ccgatacgtggactatcgaagagtatggctaatcttcttttatcaggcttaattgtc-tt 36099554

                                                                         
Query: 555      tgagtggccaccatacaagtatcttctatgaccaagaaggaaatgaggaaaatttcc 611
                 || || |||||||| | |||||| ||||||||||||||||||||||||||||||||
Sbjct: 36099555 cgaatgaccaccataaatgtatctcctatgaccaagaaggaaatgaggaaaatttcc 36099611



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 237      atcacaccaccagactgcacgcaaagaatgag 268
                ||||||||||||||| ||| ||||||||||||
Sbjct: 36099107 atcacaccaccagacggcaagcaaagaatgag 36099138
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>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0408C03
          Length = 141273

 Score =  170 bits (86), Expect = 3e-39
 Identities = 150/170 (88%), Gaps = 1/170 (0%)
 Strand = Plus / Plus

                                                                          
Query: 326    agatgctatctagcctggatgtgtttagagtgttctgatttatttggatggcacatgcag 385
              |||||||||||||||||||||  |||||||||||||||||| ||||   |||||||||||
Sbjct: 111918 agatgctatctagcctggatggatttagagtgttctgatttgtttgagcggcacatgcag 111977

                                                                          
Query: 386    tcagggcttggaaatgtgtatacagattcatttgctctttttatttgaatacccttggca 445
              || |||| |||||| ||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 111978 tcggggcatggaaaggtgtatatagattcatttgctcttttcatttcaatacccttggca 112037

                                                                
Query: 446    tcactgtgtgatctcatactaagcagcttgacgttttagtgacttccatc 495
              || ||||||| ||||||| | | || | |||||||| |||||||||||||
Sbjct: 112038 tcgctgtgtgttctcatattcaccaac-tgacgtttcagtgacttccatc 112086



 Score =  145 bits (73), Expect = 2e-31
 Identities = 107/117 (91%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                          
Query: 495    ccgatacgtggactgtcaaagagtatggccaatcttcttttatcaggcttaattgtcttt 554
              |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 112221 ccgatacgtggactatcgaagagtatggctaatcttcttttatcaggcttaattgtc-tt 112279

                                                                       
Query: 555    tgagtggccaccatacaagtatcttctatgaccaagaaggaaatgaggaaaatttcc 611
               || || |||||||| | |||||| ||||||||||||||||||||||||||||||||
Sbjct: 112280 cgaatgaccaccataaatgtatctcctatgaccaagaaggaaatgaggaaaatttcc 112336



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 237    atcacaccaccagactgcacgcaaagaatgag 268
              ||||||||||||||| ||| ||||||||||||
Sbjct: 111832 atcacaccaccagacggcaagcaaagaatgag 111863
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>ref|XM_475363.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1560

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 93/111 (83%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                        
Query: 498  atacgtggactgtcaaagagtatggccaatcttcttttatcaggcttaattgtcttttga 557
            ||||||||| ||||||| |||||||| | | ||||||| || || ||||||||| || ||
Sbjct: 1439 atacgtggattgtcaaatagtatggctagttttcttttgtctggtttaattgtcctt-ga 1381

                                                               
Query: 558  gtggccaccatacaagtatcttctatgaccaagaaggaaatgaggaaaatt 608
             || ||| ||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 1380 atgcccagcatacaagtatctcctgtgacccataaggaaatgagggaaatt 1330
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>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 93/111 (83%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                         
Query: 498   atacgtggactgtcaaagagtatggccaatcttcttttatcaggcttaattgtcttttga 557
             ||||||||| ||||||| |||||||| | | ||||||| || || ||||||||| || ||
Sbjct: 28938 atacgtggattgtcaaatagtatggctagttttcttttgtctggtttaattgtcctt-ga 28880

                                                                
Query: 558   gtggccaccatacaagtatcttctatgaccaagaaggaaatgaggaaaatt 608
              || ||| ||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 28879 atgcccagcatacaagtatctcctgtgacccataaggaaatgagggaaatt 28829



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 437   cccttggcatcactgtgtgatctcatactaagca 470
             ||||| ||||||||||||| ||||||| ||||||
Sbjct: 29109 cccttagcatcactgtgtgttctcatattaagca 29076
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 93/111 (83%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                            
Query: 498      atacgtggactgtcaaagagtatggccaatcttcttttatcaggcttaattgtcttttga 557
                ||||||||| ||||||| |||||||| | | ||||||| || || ||||||||| || ||
Sbjct: 22439531 atacgtggattgtcaaatagtatggctagttttcttttgtctggtttaattgtcctt-ga 22439473

                                                                   
Query: 558      gtggccaccatacaagtatcttctatgaccaagaaggaaatgaggaaaatt 608
                 || ||| ||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 22439472 atgcccagcatacaagtatctcctgtgacccataaggaaatgagggaaatt 22439422



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 437      cccttggcatcactgtgtgatctcatactaagca 470
                ||||| ||||||||||||| ||||||| ||||||
Sbjct: 22439702 cccttagcatcactgtgtgttctcatattaagca 22439669
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>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3,
             complete sequence
          Length = 122557

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 77/90 (85%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                         
Query: 522   gccaatcttcttttatcaggcttaattgtcttttgagtggccaccatacaagtatcttct 581
             |||||||||||||||||||| ||||||||| ||||| || ||||||||||  ||||| ||
Sbjct: 65956 gccaatcttcttttatcaggtttaattgtc-tttgaatgcccaccatacatatatctcct 65898

                                           
Query: 582   atgaccaagaaggaaatgaggaaaatttcc 611
              ||||| |  | ||| ||||||||||||||
Sbjct: 65897 gtgacccatcaagaagtgaggaaaatttcc 65868
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>gb|AY821694.1| Crithopsis delileana beta amylase gene, partial cds; and Stowaway
            MITE, complete sequence
          Length = 1521

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                        
Query: 1    tcccaaaataagtgtctcaactttgtac 28
            ||||||||||||||||||||||||||||
Sbjct: 1212 tcccaaaataagtgtctcaactttgtac 1239
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>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 1     tcccaaaataagtgtctcaactttgtac 28
             ||||||||||||||||||||||||||||
Sbjct: 50408 tcccaaaataagtgtctcaactttgtac 50435
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>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene
          Length = 10815

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 3    ccaaaataagtgtctcaactttgtac 28
            ||||||||||||||||||||||||||
Sbjct: 7214 ccaaaataagtgtctcaactttgtac 7239
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>dbj|AB183299.1| Triticum aestivum WHLP gene for ribosomal L14 protein, complete cds
          Length = 1691

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 1   tcccaaaataagtgtctcaactttgtacaa 30
           ||||||||||||||||||||||| ||||||
Sbjct: 389 tcccaaaataagtgtctcaacttagtacaa 360



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 1   tcccaaaataagtgtctcaacttt 24
           ||||||||||||||||||||||||
Sbjct: 327 tcccaaaataagtgtctcaacttt 350
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>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence
          Length = 139593

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 534   ttatcaggcttaattgtcttttgagtggccaccatacaagtatct 578
             ||||||||||| ||||||||  ||||| |||||||||||||||||
Sbjct: 96762 ttatcaggcttgattgtctta-gagtgtccaccatacaagtatct 96805
to top
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin
          Length = 1884

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 4    caaaataagtgtctcaactttgtac 28
            |||||||||||||||||||||||||
Sbjct: 1832 caaaataagtgtctcaactttgtac 1856
to top
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 1     tcccaaaataagtgtctcaactttgtac 28
             |||||||||||||||||| |||||||||
Sbjct: 31513 tcccaaaataagtgtctccactttgtac 31486
to top
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 1     tcccaaaataagtgtctcaactttgtac 28
             |||||||||||||| |||||||||||||
Sbjct: 81489 tcccaaaataagtgactcaactttgtac 81516



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 4      caaaataagtgtctcaactttgtac 28
              |||||||| ||||||||||||||||
Sbjct: 206036 caaaataaatgtctcaactttgtac 206060
to top
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and
           complete cds
          Length = 3856

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 1   tcccaaaataagtgtctcaactttgtac 28
           ||||||||||| ||||||||||||||||
Sbjct: 990 tcccaaaataactgtctcaactttgtac 963
to top
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed
             globulin (Glo-2) gene, complete cds; HMW-glutenin
             (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and
             HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds
          Length = 102842

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 1     tcccaaaataagtgtctcaactttgtac 28
             |||||||||||||| |||||||||||||
Sbjct: 66252 tcccaaaataagtgactcaactttgtac 66279
to top
>gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene,
            complete cds
          Length = 2513

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1    tcccaaaataagtgtctcaactttgtac 28
            ||||||||||| ||||||||||||||||
Sbjct: 1321 tcccaaaataattgtctcaactttgtac 1348
to top
>gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene,
            complete cds
          Length = 2550

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1    tcccaaaataagtgtctcaactttgtac 28
            ||||||||||| ||||||||||||||||
Sbjct: 1346 tcccaaaataattgtctcaactttgtac 1373
to top
>gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-like kinase gene,
            complete cds
          Length = 4643

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1    tcccaaaataagtgtctcaactttgtac 28
            ||||||||||| ||||||||||||||||
Sbjct: 2047 tcccaaaataattgtctcaactttgtac 2074
to top
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 1      tcccaaaataagtgtctcaactttgtac 28
              |||||||||||||| |||||||||||||
Sbjct: 108599 tcccaaaataagtgactcaactttgtac 108626
to top
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence
          Length = 111912

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 1     tcccaaaataagtgtctcaactttgtac 28
             ||||||| ||||||||||||||||||||
Sbjct: 68201 tcccaaattaagtgtctcaactttgtac 68228
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 1      tcccaaaataagtgtctcaactttgta 27
              |||||||||||||| ||||||||||||
Sbjct: 187688 tcccaaaataagtgactcaactttgta 187714
to top
>gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, complete sequence
          Length = 153726

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 518   tatggccaatcttcttttatcag 540
             |||||||||||||||||||||||
Sbjct: 75633 tatggccaatcttcttttatcag 75655
to top
>gb|AC022730.7| Homo sapiens chromosome 8, clone RP11-333A23, complete sequence
          Length = 155468

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 518    tatggccaatcttcttttatcag 540
              |||||||||||||||||||||||
Sbjct: 136165 tatggccaatcttcttttatcag 136187
to top
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1     tcccaaaataagtgtctcaactt 23
             |||||||||||||||||||||||
Sbjct: 51065 tcccaaaataagtgtctcaactt 51087
to top
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 1     tcccaaaataagtgtctcaactttgta 27
             ||||||||||| |||||||||||||||
Sbjct: 62349 tcccaaaataactgtctcaactttgta 62323



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     aaaataagtgtctcaactttgtac 28
             ||||||| ||||||||||||||||
Sbjct: 71166 aaaataaatgtctcaactttgtac 71143
to top
>gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, complete sequence
          Length = 142047

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 420   ctctttttatttgaataccctt 441
             ||||||||||||||||||||||
Sbjct: 61477 ctctttttatttgaataccctt 61456
to top
>gb|AC026316.16| Homo sapiens 3 BAC RP11-373E16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164409

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 420    ctctttttatttgaataccctt 441
              ||||||||||||||||||||||
Sbjct: 141383 ctctttttatttgaataccctt 141362
to top
>dbj|AP000435.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-1O21, complete
             sequences
          Length = 124067

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 420   ctctttttatttgaataccctt 441
             ||||||||||||||||||||||
Sbjct: 41224 ctctttttatttgaataccctt 41245
to top
>gb|AC115947.8| Mus musculus chromosome 5, clone RP24-560A18, complete sequence
          Length = 202882

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   tacaatggtgccaaaatgtat 300
             |||||||||||||||||||||
Sbjct: 29740 tacaatggtgccaaaatgtat 29760
to top
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
              sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
              (WM1.12) genes, complete cds; transposons Ophelia2,
              Angela3s, and XJ3, complete sequence; LRR protein WM1.3
              (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1,
              Jody, Angela, and XJ and Stowaway MITE, complete sequence;
              LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1)
              genes, complete cds; transposons XJ, XA, Angela, and Fred
              and WM1.11 gene, complete sequence; RPM1-like sequence and
              LRR protein WM1.10 (WM1.10) genes, complete cds; and
              transposon XJ, complete sequence
          Length = 198649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      caaaataagtgtctcaacttt 24
              |||||||||||||||||||||
Sbjct: 197343 caaaataagtgtctcaacttt 197323
to top
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     tcccaaaataagtgtctcaac 21
             |||||||||||||||||||||
Sbjct: 78618 tcccaaaataagtgtctcaac 78638



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     tcccaaaataagtgtctcaactttgtac 28
             ||||||||||| |||||||| |||||||
Sbjct: 78740 tcccaaaataactgtctcaagtttgtac 78713
to top
>emb|CR847804.27| Zebrafish DNA sequence from clone DKEY-85C24 in linkage group 13,
             complete sequence
          Length = 188634

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 394   tggaaatgtgtatacagattc 414
             |||||||||||||||||||||
Sbjct: 91408 tggaaatgtgtatacagattc 91428
to top
>emb|CR769785.19| Zebrafish DNA sequence from clone DKEY-1N3 in linkage group 13,
             complete sequence
          Length = 232168

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 394   tggaaatgtgtatacagattc 414
             |||||||||||||||||||||
Sbjct: 93834 tggaaatgtgtatacagattc 93814
to top
>emb|Z74696.1|HS203C2 Human DNA sequence from clone RP1-203C2 on chromosome X Contains the gene
              for actin-related protein T1 (ACTRT1), a novel pseudogene,
              a BTG family member 3 (BTG3) pseudodgene and a
              actin-related protein pseudogene, complete sequence
          Length = 150620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 421    tctttttatttgaataccctt 441
              |||||||||||||||||||||
Sbjct: 142737 tctttttatttgaataccctt 142717
to top
>emb|AL592163.1| Human DNA sequence from clone RP13-237P14 on chromosome X, complete
             sequence
          Length = 31441

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   acaatggtgccaaaatgtata 301
             |||||||||||||||||||||
Sbjct: 25766 acaatggtgccaaaatgtata 25746
to top
>emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7 on chromosome 1q25.1-31.1
             Contains a zinc-finger protein pseudogene and a novel
             pseudogene, complete sequence
          Length = 129723

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   tctttttatttgaataccctt 441
             |||||||||||||||||||||
Sbjct: 42971 tctttttatttgaataccctt 42991
to top
>gb|AC063923.21| Homo sapiens 3 BAC RP11-59E19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153448

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   tctttttatttgaataccctt 441
             |||||||||||||||||||||
Sbjct: 30600 tctttttatttgaataccctt 30620
to top
>gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, complete sequence
          Length = 171083

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 421    tctttttatttgaataccctt 441
              |||||||||||||||||||||
Sbjct: 100274 tctttttatttgaataccctt 100294
to top
>gb|AC158783.5| Mus musculus chromosome 5, clone RP23-144P3, complete sequence
          Length = 193276

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 280   tacaatggtgccaaaatgtat 300
             |||||||||||||||||||||
Sbjct: 89528 tacaatggtgccaaaatgtat 89508
to top
>gb|AC008652.6| Homo sapiens chromosome 5 clone CTB-18F1, complete sequence
          Length = 171949

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 412   ttcatttgctctttttatttgaata 436
             ||||||| |||||||||||||||||
Sbjct: 73550 ttcatttcctctttttatttgaata 73574
to top
>gb|AF172082.1|AF172082 Homo sapiens HPC1 locus clone 173P17 genomic sequence
          Length = 41078

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   tctttttatttgaataccctt 441
             |||||||||||||||||||||
Sbjct: 33587 tctttttatttgaataccctt 33607
to top
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6
          Length = 4230

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    tcccaaaataagtgtctcaac 21
            |||||||||||||||||||||
Sbjct: 3752 tcccaaaataagtgtctcaac 3732



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    tcccaaaataagtgtctcaa 20
            ||||||||||||||||||||
Sbjct: 3678 tcccaaaataagtgtctcaa 3697
to top
>gb|M65109.1|RABRG1A Rabbit glycogen-associated protein phosphatase regulatory subunit
            (RG1) mRNA, complete cds
          Length = 3876

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 575  atcttctatgaccaagaaggaaatg 599
            |||||||||||||||||| ||||||
Sbjct: 1609 atcttctatgaccaagaaagaaatg 1633
to top
>gb|AY821703.1| Henrardia persica beta amylase gene, partial cds; and Stowaway MITE,
            complete sequence
          Length = 1460

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    tcccaaaataagtgtctcaacttt 24
            |||||||||||||| |||||||||
Sbjct: 1256 tcccaaaataagtgactcaacttt 1233



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    tcccaaaataagtgtctcaacttt 24
            |||||||||||||| |||||||||
Sbjct: 1204 tcccaaaataagtgactcaacttt 1227
to top
>gb|DQ217934.1| Homo sapiens C-C chemokine receptor type 5 (CCR5) gene, complete
           cds
          Length = 9523

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 409 agattcatttgctcttttta 428
           ||||||||||||||||||||
Sbjct: 492 agattcatttgctcttttta 511
to top
>gb|U41276.1| Caenorhabditis elegans cosmid C52B11, complete sequence
          Length = 41039

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aattagcctacatcaaaatg 156
             ||||||||||||||||||||
Sbjct: 22485 aattagcctacatcaaaatg 22504
to top
>gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome C
            (PhyC) gene, complete cds
          Length = 4914

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    tcccaaaataagtgtctcaa 20
            ||||||||||||||||||||
Sbjct: 4033 tcccaaaataagtgtctcaa 4014
to top
>gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochrome C (PhyC) gene,
            complete cds
          Length = 4938

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    tcccaaaataagtgtctcaa 20
            ||||||||||||||||||||
Sbjct: 4033 tcccaaaataagtgtctcaa 4014
to top
>gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC)
            gene, complete cds
          Length = 4914

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    tcccaaaataagtgtctcaa 20
            ||||||||||||||||||||
Sbjct: 4033 tcccaaaataagtgtctcaa 4014
to top
>emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box protein (m1 gene)
          Length = 1086

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 4   caaaataagtgtctcaactttgta 27
           |||||||| |||||||||||||||
Sbjct: 928 caaaataactgtctcaactttgta 951
to top
>gb|AC131782.3| Mus musculus BAC clone RP24-361A10 from chromosome 12, complete
             sequence
          Length = 160872

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   gtatggccaatcttctttta 536
             ||||||||||||||||||||
Sbjct: 55898 gtatggccaatcttctttta 55917
to top
>gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, complete sequence
          Length = 221406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   attcatttgctctttttatt 430
             ||||||||||||||||||||
Sbjct: 46875 attcatttgctctttttatt 46894
to top
>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete sequence
          Length = 187800

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    ttcatttgctctttttattt 431
              ||||||||||||||||||||
Sbjct: 145010 ttcatttgctctttttattt 144991
to top
>ref|XM_449308.1| Candida glabrata CBS138, CAGL0L12408g partial mRNA
          Length = 1695

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 578 ttctatgaccaagaaggaaatgag 601
           |||||||||| |||||||||||||
Sbjct: 208 ttctatgacctagaaggaaatgag 231
to top
>gb|AC129327.4| Mus musculus BAC clone RP23-159J2 from chromosome 13, complete sequence
          Length = 184475

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tgagggccatggaatgaaca 205
             ||||||||||||||||||||
Sbjct: 56197 tgagggccatggaatgaaca 56216
to top
>gb|AC122874.2| Mus musculus BAC clone RP23-111G16 from 6, complete sequence
          Length = 204198

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aataagtgtctcaactttgt 26
             ||||||||||||||||||||
Sbjct: 61205 aataagtgtctcaactttgt 61186
to top
>gb|AC073903.8| Homo sapiens BAC clone RP11-564F5 from 7, complete sequence
          Length = 80531

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 418   tgctctttttatttgaataccctt 441
             |||||||| |||||||||||||||
Sbjct: 50504 tgctctttctatttgaataccctt 50527
to top
>emb|AL355377.25| Human DNA sequence from clone RP11-392A14 on chromosome 9 Contains a
             novel pseudogene, a glutamate-ammonia ligase (glutamine
             synthase) (GLUL) (GLNS) pseudogene, a tyrosine
             3-monooxygenase/tryptophan 5-monooxygenase activation
             protein, zeta polypeptide (YWHAZ) (KCIP-1) pseudogene, a
             novel gene (KIAA1045), the  DNAJB5 gene for DnaJ (Hsp40)
             homolog, subfamily B, member 5 (Hcs40), a GCIP-interacting
             protein p29 (DKFZP564O2082) pseudogene, a novel gene and 3
             CpG islands, complete sequence
          Length = 157041

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 570   caagtatcttctatgaccaa 589
             ||||||||||||||||||||
Sbjct: 48926 caagtatcttctatgaccaa 48907
to top
>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1,
             complete sequence
          Length = 153891

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 543   ttaattgtcttttgagtggc 562
             ||||||||||||||||||||
Sbjct: 50146 ttaattgtcttttgagtggc 50165
to top
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 578     ttctatgaccaagaaggaaatgag 601
               |||||||||| |||||||||||||
Sbjct: 1340278 ttctatgacctagaaggaaatgag 1340255
to top
>gb|AC078854.16| Homo sapiens 3q BAC RP11-480B17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162313

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   ctttttatttgaataccctt 441
             ||||||||||||||||||||
Sbjct: 73033 ctttttatttgaataccctt 73052
to top
>emb|BX470127.2| Mouse DNA sequence from clone RP24-280A6 on chromosome 4, complete
             sequence
          Length = 142803

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ctatgaccaagaaggaaatg 599
             ||||||||||||||||||||
Sbjct: 50496 ctatgaccaagaaggaaatg 50477
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>emb|BX072541.1| Mouse DNA sequence from clone RP23-189G9 on chromosome 4 Contains a novel
              gene and a aldo-keto reductase family 1 member B8 (Akr1b8)
              pseudogene, complete sequence
          Length = 179699

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 420    ctctttttatttgaatacccttgg 443
              |||||||||||||||| |||||||
Sbjct: 137860 ctctttttatttgaattcccttgg 137883
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>gb|AC098613.2| Homo sapiens chromosome 3 clone RP11-24F11, complete sequence
          Length = 185437

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   agattcatttgctcttttta 428
             ||||||||||||||||||||
Sbjct: 24425 agattcatttgctcttttta 24444
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>gb|AC113406.2| Homo sapiens chromosome 5 clone RP11-471O19, complete sequence
          Length = 147183

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   atgtgtatacagattcattt 418
             ||||||||||||||||||||
Sbjct: 71407 atgtgtatacagattcattt 71426
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>gb|AC114964.2| Homo sapiens chromosome 5 clone RP11-275B7, complete sequence
          Length = 171025

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    atgtgtatacagattcattt 418
              ||||||||||||||||||||
Sbjct: 155950 atgtgtatacagattcattt 155969
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>dbj|AK163072.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530023H24 product:hypothetical
           protein, full insert sequence
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 517 gtatggccaatcttctttta 536
           ||||||||||||||||||||
Sbjct: 771 gtatggccaatcttctttta 752
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>gb|AC010389.8| Homo sapiens chromosome 5 clone CTD-2077I5, complete sequence
          Length = 134060

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    ttcatttgctctttttattt 431
              ||||||||||||||||||||
Sbjct: 111296 ttcatttgctctttttattt 111277
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>gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome 13, complete sequence
          Length = 177669

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   tgagggccatggaatgaaca 205
             ||||||||||||||||||||
Sbjct: 61150 tgagggccatggaatgaaca 61131
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>gb|AC020982.6| Homo sapiens chromosome 5 clone RP1-255M24, complete sequence
          Length = 137703

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   atgtgtatacagattcattt 418
             ||||||||||||||||||||
Sbjct: 83652 atgtgtatacagattcattt 83633
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>gb|S80206.1| fibronectin {3' region} [rabbits, renal cortex, mRNA Partial, 988
           nt]
          Length = 988

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 aacatgtctctgcaaaggtc 181
           ||||||||||||||||||||
Sbjct: 325 aacatgtctctgcaaaggtc 344
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>gb|AC155647.14| Mus musculus 6 BAC RP24-151A23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 150024

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   tgagtatatatactgtacaa 284
             ||||||||||||||||||||
Sbjct: 71583 tgagtatatatactgtacaa 71602
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>gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complete sequence
          Length = 165028

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    ttcatttgctctttttattt 431
              ||||||||||||||||||||
Sbjct: 106406 ttcatttgctctttttattt 106425
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>gb|AC106894.4| Homo sapiens BAC clone RP11-141E13 from 4, complete sequence
          Length = 183176

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   ttcatttgctctttttattt 431
             ||||||||||||||||||||
Sbjct: 28700 ttcatttgctctttttattt 28681
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>gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, complete sequence
          Length = 179974

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gcctacatcaaaatggcctg 161
             ||||||||||||||||||||
Sbjct: 77515 gcctacatcaaaatggcctg 77534
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>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence
          Length = 185684

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 408    cagattcatttgctctttttatttgaataccc 439
              ||||||||| |  |||||||||||||||||||
Sbjct: 140208 cagattcatgtcatctttttatttgaataccc 140177
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>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene,
           exons 3 through 9 and complete cds
          Length = 2250

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 1   tcccaaaataagtgtctcaactttgtac 28
           |||| ||||||||| |||||||||||||
Sbjct: 424 tcccgaaataagtgactcaactttgtac 397
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>gb|AC159315.4| Mus musculus BAC clone RP23-86H21 from chromosome 12, complete
            sequence
          Length = 233568

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 517  gtatggccaatcttctttta 536
            ||||||||||||||||||||
Sbjct: 6672 gtatggccaatcttctttta 6653
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>gb|AC149890.2| Xenopus tropicalis clone ISB-181I24, complete sequence
          Length = 87937

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   gccccagaattagcctacat 149
             ||||||||||||||||||||
Sbjct: 25931 gccccagaattagcctacat 25950
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>gb|U95626.1|HSU95626 Homo sapiens ccr2b (ccr2), ccr2a (ccr2), ccr5 (ccr5) and ccr6 (ccr6)
             genes, complete cds, and lactoferrin (lactoferrin) gene,
             partial cds, complete sequence
          Length = 143068

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   agattcatttgctcttttta 428
             ||||||||||||||||||||
Sbjct: 56485 agattcatttgctcttttta 56504
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>gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosome 16, complete
             sequence
          Length = 187085

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   attcatttgctctttttatt 430
             ||||||||||||||||||||
Sbjct: 36480 attcatttgctctttttatt 36461
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>emb|AL626805.14| Mouse DNA sequence from clone RP23-118K16 on chromosome 4, complete
             sequence
          Length = 134717

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   atttgctctttttatttgaa 434
             ||||||||||||||||||||
Sbjct: 76030 atttgctctttttatttgaa 76011
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>emb|AL627182.22| Mouse DNA sequence from clone RP23-32K12 on chromosome 4, complete
              sequence
          Length = 241562

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    atttgctctttttatttgaa 434
              ||||||||||||||||||||
Sbjct: 229876 atttgctctttttatttgaa 229857
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>emb|AL732473.12| Mouse DNA sequence from clone RP23-130J8 on chromosome 4, complete
             sequence
          Length = 183937

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   gcaaagaatgagtatatatactgt 280
             |||||||||| |||||||||||||
Sbjct: 24914 gcaaagaatgtgtatatatactgt 24891
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>dbj|AB024006.1| Hordeum vulgare naat-B and naat-A genes for nicotianamine
            aminotransferase, complete cds
          Length = 10966

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 1    tcccaaaataagtgtctcaactttgtac 28
            ||||||||||| ||| ||||||||||||
Sbjct: 8988 tcccaaaataactgtttcaactttgtac 8961


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,013,777
Number of Sequences: 3902068
Number of extensions: 6013777
Number of successful extensions: 116219
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 115920
Number of HSP's gapped (non-prelim): 290
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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