ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107468.1| Zea mays PCO137522 mRNA sequence 285 8e-74
2ref|XM_482923.1| Oryza sativa (japonica cultivar-group), mRNA 240 4e-60
3dbj|AK064878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
5dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
7dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8ref|NM_113270.3| Arabidopsis thaliana protein binding / transpor... 42 2.0
9gb|AC163239.3| Carollia perspicillata clone 424F18, complete seq... 42 2.0
10ref|XM_864111.1| PREDICTED: Bos taurus similar to Ica69-related ... 42 2.0
11gb|AF526189.1| Bombyx mori transposon Bmmar3-ID8 mariner-like el... 42 2.0
12ref|XM_545600.2| PREDICTED: Canis familiaris similar to Ica69-re... 42 2.0
13gb|AY491990.1| Rattus norvegicus Ica69-related protein mRNA, com... 42 2.0
14gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.0
15emb|BX824963.1|CNS0A4W1 Arabidopsis thaliana Full-length cDNA Co... 42 2.0
16ref|NM_199400.1| Rattus norvegicus Ica69-related protein (LOC316... 42 2.0
17gb|BT005123.1| Arabidopsis thaliana clone U20149 putative transp... 42 2.0
18gb|BT002914.1| Arabidopsis thaliana clone RAFL15-05-J15 (R20149)... 42 2.0
19emb|CT572999.10| Mouse DNA sequence from clone RP23-6C18 on chro... 42 2.0
20gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 42 2.0
21gb|AY152677.1| Petromyzon marinus clone 78D10 CD9-like protein m... 42 2.0
22gb|AY650377.1| Macaca fascicularis engrailed 2 mRNA, partial cds 40 8.0
23ref|NM_120964.2| Arabidopsis thaliana lyase/ pectate lyase AT5G0... 40 8.0
24ref|XM_527959.1| PREDICTED: Pan troglodytes similar to engrailed... 40 8.0
25gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome... 40 8.0
26gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 40 8.0
27ref|XM_386168.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 8.0
28emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in ... 40 8.0
29gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosom... 40 8.0
30gb|AC128662.4| Mus musculus BAC clone RP24-440E3 from chromosome... 40 8.0
31ref|XM_758453.1| Theileria parva strain Muguga chromosome 3 hypo... 40 8.0
32gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complet... 40 8.0
33emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC... 40 8.0
34gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, comp... 40 8.0
35ref|NM_001427.2| Homo sapiens engrailed homolog 2 (EN2), mRNA 40 8.0
36dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 8.0
37gb|J03066.1|HUMFN2A Homo sapiens homeobox protein En-2 gene, par... 40 8.0
38gb|L12701.1|HUMEN2A02 Homo sapiens engrailed protein (EN2) gene,... 40 8.0
39emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in... 40 8.0
40emb|BX005382.6| Zebrafish DNA sequence from clone DKEY-242E14, c... 40 8.0
41emb|AJ332524.1|HSA332524 Homo sapiens genomic sequence surroundi... 40 8.0
42emb|AJ334725.1|HSA334725 Homo sapiens genomic sequence surroundi... 40 8.0
43emb|AJ322703.1|HSA322703 Homo sapiens genomic sequence surroundi... 40 8.0
44emb|AJ322702.1|HSA322702 Homo sapiens genomic sequence surroundi... 40 8.0
45emb|Z60844.1|HS36F7F H.sapiens CpG island DNA genomic Mse1 fragm... 40 8.0
46gb|BC104970.1| Homo sapiens engrailed homolog 2, mRNA (cDNA clon... 40 8.0
47gb|BC104972.1| Homo sapiens engrailed homolog 2, mRNA (cDNA clon... 40 8.0
48gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete seq... 40 8.0
49emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, co... 40 8.0 
>gb|AY107468.1| Zea mays PCO137522 mRNA sequence
          Length = 919

 Score =  285 bits (144), Expect = 8e-74
 Identities = 279/324 (86%), Gaps = 1/324 (0%)
 Strand = Plus / Minus

                                                                       
Query: 262 gatgggtttagctttgccagtaaaaaccgagcctgagatcc-atattgatcacagacaac 320
           ||||| |||| ||| ||||||||||| ||||| |||||||| ||||||||||||||| ||
Sbjct: 843 gatggatttaacttcgccagtaaaaatcgagcntgagatcccatattgatcacagactac 784

                                                                       
Query: 321 caaacggggtacagggaaccgctccttcattattgtgtcggcttcctcatgtggagcttt 380
           ||||||||||||||| || |||||||| ||||||   |  ||||||||||||||||||||
Sbjct: 783 caaacggggtacaggaaatcgctcctttattattaaattagcttcctcatgtggagcttt 724

                                                                       
Query: 381 caacagctgggcgaacacctcgtggccttcttgatcttggtagcccgcatttcgccattg 440
            |||| ||| || || |||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 723 taacaactgagcaaaaacctcgtgaccttcttgatcttggtagccagcatttcgccactg 664

                                                                       
Query: 441 tgcaatgttcatcccatggaagataacgacagaaaaataagaatccaacaaaaggatctt 500
            |||||| | | ||||||||| || || |||| ||||||||| ||||| |||||||||||
Sbjct: 663 cgcaatggttaccccatggaatatgacaacagtaaaataagagtccaataaaaggatctt 604

                                                                       
Query: 501 gtcangagcaattgcagttgcgtncaaganaacaggcattggccctgattgaaaggagta 560
           ||||  ||||||||||||||| | ||||| ||| |||  ||||||||||||||| || ||
Sbjct: 603 gtcagaagcaattgcagttgcatccaagagaactggctctggccctgattgaaatgaata 544

                                   
Query: 561 cgataaaagtgaaggttgaatcat 584
            |||| ||||||||||||||||||
Sbjct: 543 ggatataagtgaaggttgaatcat 520
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>ref|XM_482923.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2761

 Score =  240 bits (121), Expect = 4e-60
 Identities = 345/420 (82%), Gaps = 3/420 (0%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccgctggagatggtccatgaaaacctcgaagctcacgtcatccgtgaatataacgtctcc 227
            |||||| || || |||||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 2512 ccgctgcaggtgatccatgaagacttcgaagctcacatcatccgtgaatatgacatctcc 2453

                                                                        
Query: 228  tccgggggc---agggttatcggagttgtatgccactgatgggtttagctttgccagtaa 284
            ||| || |    ||| || || ||||| ||||  || || || || |||||||| |||||
Sbjct: 2452 tccaggtggtggaggattgtcagagttatatgtgacagacggattaagctttgctagtaa 2393

                                                                        
Query: 285  aaaccgagcctgagatccatattgatcacagacaaccaaacggggtacagggaaccgctc 344
            ||||||||||||||| |||||||||||||| || |||||||| || ||||| || |||||
Sbjct: 2392 aaaccgagcctgagaaccatattgatcacacacgaccaaacgaggaacaggaaagcgctc 2333

                                                                        
Query: 345  cttcattattgtgtcggcttcctcatgtggagctttcaacagctgggcgaacacctcgtg 404
            ||| ||||| |  || | ||||||| ||||||||||||||| ||| || ||  |||| ||
Sbjct: 2332 cttgattatcgaatcagtttcctcacgtggagctttcaacaactgagcaaatgcctcatg 2273

                                                                        
Query: 405  gccttcttgatcttggtagcccgcatttcgccattgtgcaatgttcatcccatggaagat 464
             ||||  |||||||||||||| || |||||||| || |||||| | ||||||||||| ||
Sbjct: 2272 cccttgctgatcttggtagccagcctttcgccactgcgcaatggttatcccatggaatat 2213

                                                                        
Query: 465  aacgacagaaaaataagaatccaacaaaaggatcttgtcangagcaattgcagttgcgtn 524
             |||| || ||||||||||||||||||||||||| |||||  ||||||||||||| | | 
Sbjct: 2212 gacgatagtaaaataagaatccaacaaaaggatcctgtcagcagcaattgcagttacatc 2153

                                                                        
Query: 525  caaganaacaggcattggccctgattgaaaggagtacgataaaagtgaaggttgaatcat 584
            ||| | |||||||  ||| ||||||||||| || || |||| ||||||||| || |||||
Sbjct: 2152 caacagaacaggctctgggcctgattgaaatgaatatgatataagtgaaggctggatcat 2093
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>dbj|AK064878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J20, full
            insert sequence
          Length = 2762

 Score =  240 bits (121), Expect = 4e-60
 Identities = 345/420 (82%), Gaps = 3/420 (0%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccgctggagatggtccatgaaaacctcgaagctcacgtcatccgtgaatataacgtctcc 227
            |||||| || || |||||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 2513 ccgctgcaggtgatccatgaagacttcgaagctcacatcatccgtgaatatgacatctcc 2454

                                                                        
Query: 228  tccgggggc---agggttatcggagttgtatgccactgatgggtttagctttgccagtaa 284
            ||| || |    ||| || || ||||| ||||  || || || || |||||||| |||||
Sbjct: 2453 tccaggtggtggaggattgtcagagttatatgtgacagacggattaagctttgctagtaa 2394

                                                                        
Query: 285  aaaccgagcctgagatccatattgatcacagacaaccaaacggggtacagggaaccgctc 344
            ||||||||||||||| |||||||||||||| || |||||||| || ||||| || |||||
Sbjct: 2393 aaaccgagcctgagaaccatattgatcacacacgaccaaacgaggaacaggaaagcgctc 2334

                                                                        
Query: 345  cttcattattgtgtcggcttcctcatgtggagctttcaacagctgggcgaacacctcgtg 404
            ||| ||||| |  || | ||||||| ||||||||||||||| ||| || ||  |||| ||
Sbjct: 2333 cttgattatcgaatcagtttcctcacgtggagctttcaacaactgagcaaatgcctcatg 2274

                                                                        
Query: 405  gccttcttgatcttggtagcccgcatttcgccattgtgcaatgttcatcccatggaagat 464
             ||||  |||||||||||||| || |||||||| || |||||| | ||||||||||| ||
Sbjct: 2273 cccttgctgatcttggtagccagcctttcgccactgcgcaatggttatcccatggaatat 2214

                                                                        
Query: 465  aacgacagaaaaataagaatccaacaaaaggatcttgtcangagcaattgcagttgcgtn 524
             |||| || ||||||||||||||||||||||||| |||||  ||||||||||||| | | 
Sbjct: 2213 gacgatagtaaaataagaatccaacaaaaggatcctgtcagcagcaattgcagttacatc 2154

                                                                        
Query: 525  caaganaacaggcattggccctgattgaaaggagtacgataaaagtgaaggttgaatcat 584
            ||| | |||||||  ||| ||||||||||| || || |||| ||||||||| || |||||
Sbjct: 2153 caacagaacaggctctgggcctgattgaaatgaatatgatataagtgaaggctggatcat 2094
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  149 bits (75), Expect = 1e-32
 Identities = 159/188 (84%)
 Strand = Plus / Minus

                                                                            
Query: 397      acctcgtggccttcttgatcttggtagcccgcatttcgccattgtgcaatgttcatccca 456
                ||||||||| ||| |||||||||||| || ||||||||||| ||||||||  | ||||||
Sbjct: 17357671 acctcgtggtcttgttgatcttggtaaccagcatttcgccactgtgcaatcgttatccca 17357612

                                                                            
Query: 457      tggaagataacgacagaaaaataagaatccaacaaaaggatcttgtcangagcaattgca 516
                ||||||||||| |||| ||||||||||||||| ||||| |||||||||   |||||||||
Sbjct: 17357611 tggaagataacaacagtaaaataagaatccaataaaagaatcttgtcagctgcaattgca 17357552

                                                                            
Query: 517      gttgcgtncaaganaacaggcattggccctgattgaaaggagtacgataaaagtgaaggt 576
                ||| | |  |||| ||| |||  |||||| |||||||| || || |||| ||||||||| 
Sbjct: 17357551 gttacatctaagagaactggctctggcccagattgaaatgaataggatataagtgaaggc 17357492

                        
Query: 577      tgaatcat 584
                ||||||||
Sbjct: 17357491 tgaatcat 17357484



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                            
Query: 293      cctgagatccatattgatcacagacaaccaaacggggtacagggaaccgctccttcatta 352
                ||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| | ||||
Sbjct: 17358034 cctgagacccatactgatcacagacgaccaaacggggtacaggaaaccgctccctgatta 17357975

                                                 
Query: 353      ttgtgtcggcttcctcatgtggagctttcaaca 385
                | || || |||||||||||||||| ||| ||||
Sbjct: 17357974 tagtatcagcttcctcatgtggagattttaaca 17357942



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Minus

                                                                            
Query: 152      cctattgcaccgctaaccgctggagatggtccatgaaaacctcgaagctcacgtcatccg 211
                ||||||| || |||| ||||  ||||||||||||||| |||| ||||||||| ||||| |
Sbjct: 17358299 cctattggactgctagccgcatgagatggtccatgaagacctggaagctcacatcatctg 17358240

                                                                            
Query: 212      tgaatataacgtctcctccgggggcagggttatcggagttgtatgccactgatgggttta 271
                ||||||| |||||||||||  | | ||  ||||| || || ||||  || ||||| || |
Sbjct: 17358239 tgaatatgacgtctcctccatgagaagaattatcagaattatatgtgacagatggattaa 17358180

                                          
Query: 272      gctttgccagtaaaaaccgagcctga 297
                |||||||||||||||| |||||||||
Sbjct: 17358179 gctttgccagtaaaaatcgagcctga 17358154
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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0054F02
          Length = 180651

 Score =  149 bits (75), Expect = 1e-32
 Identities = 159/188 (84%)
 Strand = Plus / Minus

                                                                         
Query: 397   acctcgtggccttcttgatcttggtagcccgcatttcgccattgtgcaatgttcatccca 456
             ||||||||| ||| |||||||||||| || ||||||||||| ||||||||  | ||||||
Sbjct: 81584 acctcgtggtcttgttgatcttggtaaccagcatttcgccactgtgcaatcgttatccca 81525

                                                                         
Query: 457   tggaagataacgacagaaaaataagaatccaacaaaaggatcttgtcangagcaattgca 516
             ||||||||||| |||| ||||||||||||||| ||||| |||||||||   |||||||||
Sbjct: 81524 tggaagataacaacagtaaaataagaatccaataaaagaatcttgtcagctgcaattgca 81465

                                                                         
Query: 517   gttgcgtncaaganaacaggcattggccctgattgaaaggagtacgataaaagtgaaggt 576
             ||| | |  |||| ||| |||  |||||| |||||||| || || |||| ||||||||| 
Sbjct: 81464 gttacatctaagagaactggctctggcccagattgaaatgaataggatataagtgaaggc 81405

                     
Query: 577   tgaatcat 584
             ||||||||
Sbjct: 81404 tgaatcat 81397



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                         
Query: 293   cctgagatccatattgatcacagacaaccaaacggggtacagggaaccgctccttcatta 352
             ||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| | ||||
Sbjct: 81947 cctgagacccatactgatcacagacgaccaaacggggtacaggaaaccgctccctgatta 81888

                                              
Query: 353   ttgtgtcggcttcctcatgtggagctttcaaca 385
             | || || |||||||||||||||| ||| ||||
Sbjct: 81887 tagtatcagcttcctcatgtggagattttaaca 81855



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Minus

                                                                         
Query: 152   cctattgcaccgctaaccgctggagatggtccatgaaaacctcgaagctcacgtcatccg 211
             ||||||| || |||| ||||  ||||||||||||||| |||| ||||||||| ||||| |
Sbjct: 82212 cctattggactgctagccgcatgagatggtccatgaagacctggaagctcacatcatctg 82153

                                                                         
Query: 212   tgaatataacgtctcctccgggggcagggttatcggagttgtatgccactgatgggttta 271
             ||||||| |||||||||||  | | ||  ||||| || || ||||  || ||||| || |
Sbjct: 82152 tgaatatgacgtctcctccatgagaagaattatcagaattatatgtgacagatggattaa 82093

                                       
Query: 272   gctttgccagtaaaaaccgagcctga 297
             |||||||||||||||| |||||||||
Sbjct: 82092 gctttgccagtaaaaatcgagcctga 82067
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 2e-28
 Identities = 146/173 (84%)
 Strand = Plus / Minus

                                                                            
Query: 412      tgatcttggtagcccgcatttcgccattgtgcaatgttcatcccatggaagataacgaca 471
                |||||||||||||| || |||||||| || |||||| | ||||||||||| || |||| |
Sbjct: 23394230 tgatcttggtagccagcctttcgccactgcgcaatggttatcccatggaatatgacgata 23394171

                                                                            
Query: 472      gaaaaataagaatccaacaaaaggatcttgtcangagcaattgcagttgcgtncaagana 531
                | ||||||||||||||||||||||||| |||||  ||||||||||||| | | ||| | |
Sbjct: 23394170 gtaaaataagaatccaacaaaaggatcctgtcagcagcaattgcagttacatccaacaga 23394111

                                                                     
Query: 532      acaggcattggccctgattgaaaggagtacgataaaagtgaaggttgaatcat 584
                ||||||  ||| ||||||||||| || || |||| ||||||||| || |||||
Sbjct: 23394110 acaggctctgggcctgattgaaatgaatatgatataagtgaaggctggatcat 23394058



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                            
Query: 293      cctgagatccatattgatcacagacaaccaaacggggtacagggaaccgctccttcatta 352
                ||||||| |||||||||||||| || |||||||| || ||||| || |||||||| ||||
Sbjct: 23394803 cctgagaaccatattgatcacacacgaccaaacgaggaacaggaaagcgctccttgatta 23394744

                                                 
Query: 353      ttgtgtcggcttcctcatgtggagctttcaaca 385
                | |  || | ||||||| |||||||||||||||
Sbjct: 23394743 tcgaatcagtttcctcacgtggagctttcaaca 23394711



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 168      ccgctggagatggtccatgaaaacctcgaagctcacgtcatccgtgaatataacgtctcc 227
                |||||| || || |||||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 23395432 ccgctgcaggtgatccatgaagacttcgaagctcacatcatccgtgaatatgacatctcc 23395373

                   
Query: 228      tcc 230
                |||
Sbjct: 23395372 tcc 23395370
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>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score =  135 bits (68), Expect = 2e-28
 Identities = 146/173 (84%)
 Strand = Plus / Minus

                                                                         
Query: 412   tgatcttggtagcccgcatttcgccattgtgcaatgttcatcccatggaagataacgaca 471
             |||||||||||||| || |||||||| || |||||| | ||||||||||| || |||| |
Sbjct: 76067 tgatcttggtagccagcctttcgccactgcgcaatggttatcccatggaatatgacgata 76008

                                                                         
Query: 472   gaaaaataagaatccaacaaaaggatcttgtcangagcaattgcagttgcgtncaagana 531
             | ||||||||||||||||||||||||| |||||  ||||||||||||| | | ||| | |
Sbjct: 76007 gtaaaataagaatccaacaaaaggatcctgtcagcagcaattgcagttacatccaacaga 75948

                                                                  
Query: 532   acaggcattggccctgattgaaaggagtacgataaaagtgaaggttgaatcat 584
             ||||||  ||| ||||||||||| || || |||| ||||||||| || |||||
Sbjct: 75947 acaggctctgggcctgattgaaatgaatatgatataagtgaaggctggatcat 75895



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                         
Query: 293   cctgagatccatattgatcacagacaaccaaacggggtacagggaaccgctccttcatta 352
             ||||||| |||||||||||||| || |||||||| || ||||| || |||||||| ||||
Sbjct: 76640 cctgagaaccatattgatcacacacgaccaaacgaggaacaggaaagcgctccttgatta 76581

                                              
Query: 353   ttgtgtcggcttcctcatgtggagctttcaaca 385
             | |  || | ||||||| |||||||||||||||
Sbjct: 76580 tcgaatcagtttcctcacgtggagctttcaaca 76548



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 168   ccgctggagatggtccatgaaaacctcgaagctcacgtcatccgtgaatataacgtctcc 227
             |||||| || || |||||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 77269 ccgctgcaggtgatccatgaagacttcgaagctcacatcatccgtgaatatgacatctcc 77210

                
Query: 228   tcc 230
             |||
Sbjct: 77209 tcc 77207
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>ref|NM_113270.3| Arabidopsis thaliana protein binding / transporter AT3G23660 mRNA,
            complete cds
          Length = 2561

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 260  ctgatgggtttagctttgccagtaaaaaccgagcctgagatccatattgatcacagacaa 319
            ||||||| || ||||| |||| ||||||||  ||||| || ||||  |||||||||||||
Sbjct: 2239 ctgatggattcagcttcgccaataaaaaccttgcctgcgagccatgctgatcacagacaa 2180

             
Query: 320  c 320
            |
Sbjct: 2179 c 2179
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>gb|AC163239.3| Carollia perspicillata clone 424F18, complete sequence
          Length = 52968

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 473   aaaaataagaatccaacaaaaggat 497
             |||||||| ||||||||||||||||
Sbjct: 28571 aaaaataataatccaacaaaaggat 28547
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>ref|XM_864111.1| PREDICTED: Bos taurus similar to Ica69-related protein, transcript
            variant 2 (LOC538992), mRNA
          Length = 1451

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 372  tggagctttcaacagctgggc 392
            |||||||||||||||||||||
Sbjct: 1232 tggagctttcaacagctgggc 1252
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>gb|AF526189.1| Bombyx mori transposon Bmmar3-ID8 mariner-like element, complete
           sequence
          Length = 1114

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 343 tccttcattattgtgtcggct 363
           |||||||||||||||||||||
Sbjct: 444 tccttcattattgtgtcggct 424
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>ref|XM_545600.2| PREDICTED: Canis familiaris similar to Ica69-related protein,
            transcript variant 1 (LOC488479), mRNA
          Length = 1520

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 372  tggagctttcaacagctgggc 392
            |||||||||||||||||||||
Sbjct: 1227 tggagctttcaacagctgggc 1247
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>gb|AY491990.1| Rattus norvegicus Ica69-related protein mRNA, complete cds
          Length = 1308

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 372  tggagctttcaacagctgggc 392
            |||||||||||||||||||||
Sbjct: 1155 tggagctttcaacagctgggc 1175
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 385     agctgggcgaacacctcgtgg 405
               |||||||||||||||||||||
Sbjct: 1981862 agctgggcgaacacctcgtgg 1981882
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>emb|BX824963.1|CNS0A4W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH85ZH10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2462

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 260  ctgatgggtttagctttgccagtaaaaaccgagcctgagatccatattgatcacagacaa 319
            ||||||| || ||||| |||| ||||||||  ||||| || ||||  |||||||||||||
Sbjct: 2195 ctgatggattcagcttcgccaataaaaaccttgcctgcgagccatgctgatcacagacaa 2136

             
Query: 320  c 320
            |
Sbjct: 2135 c 2135
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>ref|NM_199400.1| Rattus norvegicus Ica69-related protein (LOC316432), mRNA
          Length = 1308

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 372  tggagctttcaacagctgggc 392
            |||||||||||||||||||||
Sbjct: 1155 tggagctttcaacagctgggc 1175
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>gb|BT005123.1| Arabidopsis thaliana clone U20149 putative transport protein
            (At3g23660) mRNA, complete cds
          Length = 2328

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 260  ctgatgggtttagctttgccagtaaaaaccgagcctgagatccatattgatcacagacaa 319
            ||||||| || ||||| |||| ||||||||  ||||| || ||||  |||||||||||||
Sbjct: 2185 ctgatggattcagcttcgccaataaaaaccttgcctgcgagccatgctgatcacagacaa 2126

             
Query: 320  c 320
            |
Sbjct: 2125 c 2125
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>gb|BT002914.1| Arabidopsis thaliana clone RAFL15-05-J15 (R20149) putative transport
            protein (At3g23660) mRNA, complete cds
          Length = 2495

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 260  ctgatgggtttagctttgccagtaaaaaccgagcctgagatccatattgatcacagacaa 319
            ||||||| || ||||| |||| ||||||||  ||||| || ||||  |||||||||||||
Sbjct: 2246 ctgatggattcagcttcgccaataaaaaccttgcctgcgagccatgctgatcacagacaa 2187

             
Query: 320  c 320
            |
Sbjct: 2186 c 2186
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>emb|CT572999.10| Mouse DNA sequence from clone RP23-6C18 on chromosome 12, complete
              sequence
          Length = 176044

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     caatacaaagtaacaagacac 40
              |||||||||||||||||||||
Sbjct: 104042 caatacaaagtaacaagacac 104022
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 473    aaaaataagaatccaacaaaaggat 497
              |||||||| ||||||||||||||||
Sbjct: 957132 aaaaataataatccaacaaaaggat 957108
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>gb|AY152677.1| Petromyzon marinus clone 78D10 CD9-like protein mRNA, complete cds
          Length = 1513

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 16   cacacaatacaaagtaacaag 36
            |||||||||||||||||||||
Sbjct: 1047 cacacaatacaaagtaacaag 1027
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>gb|AY650377.1| Macaca fascicularis engrailed 2 mRNA, partial cds
          Length = 561

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 468 cgtggccttcttgatcttgg 449
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>ref|NM_120964.2| Arabidopsis thaliana lyase/ pectate lyase AT5G09280 mRNA,
          complete cds
          Length = 894

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 14 gtcacacaatacaaagtaac 33
          ||||||||||||||||||||
Sbjct: 25 gtcacacaatacaaagtaac 44
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>ref|XM_527959.1| PREDICTED: Pan troglodytes similar to engrailed protein (LOC472584),
            mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  cgtggccttcttgatcttgg 420
            ||||||||||||||||||||
Sbjct: 1782 cgtggccttcttgatcttgg 1763
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>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence
          Length = 222363

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gaacaatgcctctttactgt 73
             ||||||||||||||||||||
Sbjct: 96519 gaacaatgcctctttactgt 96538
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>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   caggcattggccctgattga 552
             ||||||||||||||||||||
Sbjct: 26817 caggcattggccctgattga 26836
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>ref|XM_386168.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05992.1)
           partial mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 acctcgtggccttcttgatc 416
           ||||||||||||||||||||
Sbjct: 338 acctcgtggccttcttgatc 357
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>emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in linkage group 11, complete
              sequence
          Length = 231837

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    aacgacagaaaaataagaat 484
              ||||||||||||||||||||
Sbjct: 179926 aacgacagaaaaataagaat 179945
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>gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosome 12, complete
             sequence
          Length = 198084

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   caggcattggccctgattga 552
             ||||||||||||||||||||
Sbjct: 72703 caggcattggccctgattga 72684
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>gb|AC128662.4| Mus musculus BAC clone RP24-440E3 from chromosome 6, complete
           sequence
          Length = 134729

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gaacaatgcctctttactgt 73
           ||||||||||||||||||||
Sbjct: 267 gaacaatgcctctttactgt 286
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>ref|XM_758453.1| Theileria parva strain Muguga chromosome 3 hypothetical protein
            (TP03_0518) partial mRNA
          Length = 2678

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agaaaaataagaatccaaca 490
            ||||||||||||||||||||
Sbjct: 2399 agaaaaataagaatccaaca 2380
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>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence
          Length = 161566

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   cgtggccttcttgatcttgg 420
             ||||||||||||||||||||
Sbjct: 93438 cgtggccttcttgatcttgg 93419
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>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project)
          Length = 103534

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gtcacacaatacaaagtaac 33
             ||||||||||||||||||||
Sbjct: 22358 gtcacacaatacaaagtaac 22339
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>gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, complete sequence
          Length = 173135

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 473   aaaaataagaatccaacaaaagga 496
             |||||||| |||||||||||||||
Sbjct: 96459 aaaaataaaaatccaacaaaagga 96482
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>ref|NM_001427.2| Homo sapiens engrailed homolog 2 (EN2), mRNA
          Length = 4793

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  cgtggccttcttgatcttgg 420
            ||||||||||||||||||||
Sbjct: 2577 cgtggccttcttgatcttgg 2558
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 552     aaaggagtacgataaaagtg 571
               ||||||||||||||||||||
Sbjct: 2177107 aaaggagtacgataaaagtg 2177088
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>gb|J03066.1|HUMFN2A Homo sapiens homeobox protein En-2 gene, partial cds
          Length = 349

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 243 cgtggccttcttgatcttgg 224
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>gb|L12701.1|HUMEN2A02 Homo sapiens engrailed protein (EN2) gene, exon 2 and complete cds
          Length = 2440

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 224 cgtggccttcttgatcttgg 205
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>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19,
             complete sequence
          Length = 168515

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   cctcgaagctcacgtcatcc 210
             ||||||||||||||||||||
Sbjct: 70966 cctcgaagctcacgtcatcc 70947
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>emb|BX005382.6| Zebrafish DNA sequence from clone DKEY-242E14, complete sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    aacgacagaaaaataagaat 484
              ||||||||||||||||||||
Sbjct: 115787 aacgacagaaaaataagaat 115806
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>emb|AJ332524.1|HSA332524 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KB1R
          Length = 886

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 175 cgtggccttcttgatcttgg 156
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>emb|AJ334725.1|HSA334725 Homo sapiens genomic sequence surrounding NotI site, clone NB1-726C
          Length = 975

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 175 cgtggccttcttgatcttgg 156
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>emb|AJ322703.1|HSA322703 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-OK12C
          Length = 812

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 176 cgtggccttcttgatcttgg 157
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>emb|AJ322702.1|HSA322702 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OO8C
          Length = 861

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 175 cgtggccttcttgatcttgg 156
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>emb|Z60844.1|HS36F7F H.sapiens CpG island DNA genomic Mse1 fragment, clone 36f7, forward
           read cpg36f7.ft1a
          Length = 274

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 401 cgtggccttcttgatcttgg 420
           ||||||||||||||||||||
Sbjct: 148 cgtggccttcttgatcttgg 167
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>gb|BC104970.1| Homo sapiens engrailed homolog 2, mRNA (cDNA clone MGC:132630
            IMAGE:8143973), complete cds
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  cgtggccttcttgatcttgg 420
            ||||||||||||||||||||
Sbjct: 1158 cgtggccttcttgatcttgg 1139
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>gb|BC104972.1| Homo sapiens engrailed homolog 2, mRNA (cDNA clone MGC:132632
            IMAGE:8143975), complete cds
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  cgtggccttcttgatcttgg 420
            ||||||||||||||||||||
Sbjct: 1158 cgtggccttcttgatcttgg 1139
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>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence
          Length = 1332022

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     caccacaagagatgagtgct 94
              ||||||||||||||||||||
Sbjct: 120999 caccacaagagatgagtgct 120980
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>emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, complete sequence
          Length = 58683

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   aacgacagaaaaataagaat 484
             ||||||||||||||||||||
Sbjct: 31132 aacgacagaaaaataagaat 31151


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,132,871
Number of Sequences: 3902068
Number of extensions: 4132871
Number of successful extensions: 63737
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63581
Number of HSP's gapped (non-prelim): 154
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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