| Clone Name | rbags15b01 |
|---|---|
| Clone Library Name | barley_pub |
>ARSA_METJA (Q58542) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 349 Score = 52.4 bits (124), Expect = 1e-06 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Frame = -2 Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455 P M+I ES R +LQK +P+ +IVNQ++ P C FC +R+ Q + L+MIK Sbjct: 246 PEEMSILESERAMKALQKYGIPIDAVIVNQLI-PEDVQCDFCRARRELQLKRLEMIK--- 301 Query: 454 ELMGLNIM-QAPLVDMEIRGVPAXKFLGDIVW 362 E G ++ PL+ E +G+ K + I++ Sbjct: 302 EKFGDKVIAYVPLLRTEAKGIETLKQIAKILY 333
>ARSA_METTH (O27555) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 324 Score = 50.1 bits (118), Expect = 6e-06 Identities = 31/94 (32%), Positives = 50/94 (53%) Frame = -2 Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455 P M+I ES R +L+K S+ +IVNQVL P SDC+FC +RK Q L I+ Sbjct: 231 PEEMSIYESERAMKALEKYSIHADGVIVNQVL-PEESDCEFCNARRKLQQERLKQIRE-- 287 Query: 454 ELMGLNIMQAPLVDMEIRGVPAXKFLGDIVWK*P 353 + + + PL+ E +G+ + + + ++ P Sbjct: 288 KFSDKVVAEVPLLKKEAKGIETLEKIAEQLYGEP 321
>ARSA_CAEEL (P30632) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 342 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Frame = -2 Query: 625 MAISESARLHXSLQKESVPVRRLIVNQVLPPSSS-----DCKFCAIKRKDQTRALDMIKS 461 +++ E+ RL L K+ + +IVNQ+L P + C+ CA ++ Q++ L I Sbjct: 245 LSLYETERLIQELSKQGIDTHNIIVNQLLFPDTDANGTVSCRKCASRQAIQSKYLTDI-- 302 Query: 460 DPELMGLNIMQAPLVDMEIRGVPA 389 D ++++ PL++ E+RG PA Sbjct: 303 DELYEDFHVVKLPLLEAEVRGGPA 326
>ARSA_SYNY3 (Q55794) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 396 Score = 36.6 bits (83), Expect = 0.071 Identities = 26/92 (28%), Positives = 42/92 (45%) Frame = -2 Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455 P M + ES R H L +V +I N++LP + D F K Q ++ + Sbjct: 219 PEKMVLKESLRAHAYLSLYNVSTDLVIANRILPETIDDPFFQRWKSNQQVYKQEIYDN-- 276 Query: 454 ELMGLNIMQAPLVDMEIRGVPAXKFLGDIVWK 359 L + +APL E+ G+ A + L D ++K Sbjct: 277 -FHPLPVKEAPLFSEEMCGLAALERLKDTLYK 307
>ARSA2_AQUAE (O66674) Putative arsenical pump-driving ATPase 2 (EC 3.6.3.16)| (Arsenite-translocating ATPase 2) (Arsenical resistance ATPase 2) (Arsenite-transporting ATPase 2) Length = 299 Score = 30.8 bits (68), Expect = 3.9 Identities = 22/84 (26%), Positives = 41/84 (48%) Frame = -2 Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455 P + E+ RL SL+ + V+ LI+N+VLP + D +F +++ + + L I++ Sbjct: 210 PEKLPFEETKRLVNSLKHYGIRVKALIINKVLPENPQD-EFLKARKEVEKKFLKEIEN-- 266 Query: 454 ELMGLNIMQAPLVDMEIRGVPAXK 383 M + + P E+ G K Sbjct: 267 YFMDIEKISIPYQKEEVVGYEKLK 290
>Y095_TREPA (O83133) Hypothetical protein TP0095| Length = 648 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 293 INSCIDQVVP-LKLSHFFRKLRSLPHYITQKLXSRNSSNFHVHERCLHYVQPHQL 454 IN +D V P L L+H FR L+ P +TQ R +S F H+ L + + L Sbjct: 212 INQDVDGVAPRLYLAHAFRSLKHFPEALTQ---YRAASAFAPHDPALKWYEAAML 263
>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking| family 7) Length = 5327 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +1 Query: 208 WFYVLFTHVRNGHLLSWILPSSSKELGLDKQLYRSSSSTEVITFFPQT 351 W +L+ H+R H L++ SSS EL ++KQ ++ + P+T Sbjct: 1692 WVGLLWGHLRESHRLAFQEWSSSLELAMEKQTLAATDGHVDVNQVPET 1739 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,815,713 Number of Sequences: 219361 Number of extensions: 1972292 Number of successful extensions: 4305 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4303 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)