ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARSA_METJA (Q58542) Putative arsenical pump-driving ATPase (EC 3... 52 1e-06
2ARSA_METTH (O27555) Putative arsenical pump-driving ATPase (EC 3... 50 6e-06
3ARSA_CAEEL (P30632) Putative arsenical pump-driving ATPase (EC 3... 42 0.001
4ARSA_SYNY3 (Q55794) Putative arsenical pump-driving ATPase (EC 3... 37 0.071
5ARSA2_AQUAE (O66674) Putative arsenical pump-driving ATPase 2 (E... 31 3.9
6Y095_TREPA (O83133) Hypothetical protein TP0095 30 6.6
7MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Ac... 30 8.7

>ARSA_METJA (Q58542) Putative arsenical pump-driving ATPase (EC 3.6.3.16)|
           (Arsenite-translocating ATPase) (Arsenical resistance
           ATPase) (Arsenite-transporting ATPase)
          Length = 349

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -2

Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455
           P  M+I ES R   +LQK  +P+  +IVNQ++ P    C FC  +R+ Q + L+MIK   
Sbjct: 246 PEEMSILESERAMKALQKYGIPIDAVIVNQLI-PEDVQCDFCRARRELQLKRLEMIK--- 301

Query: 454 ELMGLNIM-QAPLVDMEIRGVPAXKFLGDIVW 362
           E  G  ++   PL+  E +G+   K +  I++
Sbjct: 302 EKFGDKVIAYVPLLRTEAKGIETLKQIAKILY 333



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>ARSA_METTH (O27555) Putative arsenical pump-driving ATPase (EC 3.6.3.16)|
           (Arsenite-translocating ATPase) (Arsenical resistance
           ATPase) (Arsenite-transporting ATPase)
          Length = 324

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 31/94 (32%), Positives = 50/94 (53%)
 Frame = -2

Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455
           P  M+I ES R   +L+K S+    +IVNQVL P  SDC+FC  +RK Q   L  I+   
Sbjct: 231 PEEMSIYESERAMKALEKYSIHADGVIVNQVL-PEESDCEFCNARRKLQQERLKQIRE-- 287

Query: 454 ELMGLNIMQAPLVDMEIRGVPAXKFLGDIVWK*P 353
           +     + + PL+  E +G+   + + + ++  P
Sbjct: 288 KFSDKVVAEVPLLKKEAKGIETLEKIAEQLYGEP 321



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>ARSA_CAEEL (P30632) Putative arsenical pump-driving ATPase (EC 3.6.3.16)|
           (Arsenite-translocating ATPase) (Arsenical resistance
           ATPase) (Arsenite-transporting ATPase)
          Length = 342

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
 Frame = -2

Query: 625 MAISESARLHXSLQKESVPVRRLIVNQVLPPSSS-----DCKFCAIKRKDQTRALDMIKS 461
           +++ E+ RL   L K+ +    +IVNQ+L P +       C+ CA ++  Q++ L  I  
Sbjct: 245 LSLYETERLIQELSKQGIDTHNIIVNQLLFPDTDANGTVSCRKCASRQAIQSKYLTDI-- 302

Query: 460 DPELMGLNIMQAPLVDMEIRGVPA 389
           D      ++++ PL++ E+RG PA
Sbjct: 303 DELYEDFHVVKLPLLEAEVRGGPA 326



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>ARSA_SYNY3 (Q55794) Putative arsenical pump-driving ATPase (EC 3.6.3.16)|
           (Arsenite-translocating ATPase) (Arsenical resistance
           ATPase) (Arsenite-transporting ATPase)
          Length = 396

 Score = 36.6 bits (83), Expect = 0.071
 Identities = 26/92 (28%), Positives = 42/92 (45%)
 Frame = -2

Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455
           P  M + ES R H  L   +V    +I N++LP +  D  F   K   Q    ++  +  
Sbjct: 219 PEKMVLKESLRAHAYLSLYNVSTDLVIANRILPETIDDPFFQRWKSNQQVYKQEIYDN-- 276

Query: 454 ELMGLNIMQAPLVDMEIRGVPAXKFLGDIVWK 359
               L + +APL   E+ G+ A + L D ++K
Sbjct: 277 -FHPLPVKEAPLFSEEMCGLAALERLKDTLYK 307



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>ARSA2_AQUAE (O66674) Putative arsenical pump-driving ATPase 2 (EC 3.6.3.16)|
           (Arsenite-translocating ATPase 2) (Arsenical resistance
           ATPase 2) (Arsenite-transporting ATPase 2)
          Length = 299

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = -2

Query: 634 PTVMAISESARLHXSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDP 455
           P  +   E+ RL  SL+   + V+ LI+N+VLP +  D +F   +++ + + L  I++  
Sbjct: 210 PEKLPFEETKRLVNSLKHYGIRVKALIINKVLPENPQD-EFLKARKEVEKKFLKEIEN-- 266

Query: 454 ELMGLNIMQAPLVDMEIRGVPAXK 383
             M +  +  P    E+ G    K
Sbjct: 267 YFMDIEKISIPYQKEEVVGYEKLK 290



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>Y095_TREPA (O83133) Hypothetical protein TP0095|
          Length = 648

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 293 INSCIDQVVP-LKLSHFFRKLRSLPHYITQKLXSRNSSNFHVHERCLHYVQPHQL 454
           IN  +D V P L L+H FR L+  P  +TQ    R +S F  H+  L + +   L
Sbjct: 212 INQDVDGVAPRLYLAHAFRSLKHFPEALTQ---YRAASAFAPHDPALKWYEAAML 263



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>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking|
            family 7)
          Length = 5327

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 208  WFYVLFTHVRNGHLLSWILPSSSKELGLDKQLYRSSSSTEVITFFPQT 351
            W  +L+ H+R  H L++   SSS EL ++KQ   ++     +   P+T
Sbjct: 1692 WVGLLWGHLRESHRLAFQEWSSSLELAMEKQTLAATDGHVDVNQVPET 1739


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,815,713
Number of Sequences: 219361
Number of extensions: 1972292
Number of successful extensions: 4305
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4303
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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