| Clone Name | rbags15a23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D10, full insert sequence Length = 2389 Score = 438 bits (221), Expect = e-119 Identities = 409/471 (86%), Gaps = 3/471 (0%) Strand = Plus / Minus Query: 192 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 251 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2142 cctcagcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 2083 Query: 252 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcaggagcatgg 311 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 2082 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 2023 Query: 312 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 371 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 2022 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 1963 Query: 372 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 431 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 1962 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 1903 Query: 432 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggca 491 | ||||| || || |||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 1902 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaacttctctggca 1843 Query: 492 ggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct---tccttggaca 548 ||| ||||||||||||||||||| || |||| | || |||| ||| |||||| ||| Sbjct: 1842 agcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttcatccttgcaca 1783 Query: 549 ctagaatgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattt 608 ||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||| Sbjct: 1782 ctaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaacactgctattt 1723 Query: 609 tgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaacttc 659 |||||||||||||||| || || || || |||||||| ||||||||||||| Sbjct: 1722 tgtggacctccttcactggaaatgctcggggacccatatcctcacaacttc 1672 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 58 ggatacagacgaacaactagatcagttattctg 90 |||||||| ||||||||||||||||||||||| Sbjct: 2269 ggatacagctgaacaactagatcagttattctg 2237
>dbj|AK100224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L02, full insert sequence Length = 2490 Score = 430 bits (217), Expect = e-117 Identities = 408/471 (86%), Gaps = 3/471 (0%) Strand = Plus / Minus Query: 192 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 251 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2164 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 2105 Query: 252 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcaggagcatgg 311 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 2104 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 2045 Query: 312 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 371 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 2044 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 1985 Query: 372 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 431 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 1984 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 1925 Query: 432 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggca 491 | ||||| || || |||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 1924 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaacttccctggca 1865 Query: 492 ggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct---tccttggaca 548 ||| ||||||||||||||||||| || |||| | || |||| ||| |||||| ||| Sbjct: 1864 agcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttcatccttgcaca 1805 Query: 549 ctagaatgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattt 608 ||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||| Sbjct: 1804 ctaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaacactgctattt 1745 Query: 609 tgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaacttc 659 |||||||||||||||| || || || || |||||||| ||||||||||||| Sbjct: 1744 tgtggacctccttcactggaaatgctcggggacccatatcctcacaacttc 1694 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 58 ggatacagacgaacaactagatcagttattctg 90 |||||||| ||||||||||||||||||||||| Sbjct: 2291 ggatacagctgaacaactagatcagttattctg 2259
>gb|AY110220.1| Zea mays CL3641_1 mRNA sequence Length = 880 Score = 408 bits (206), Expect = e-111 Identities = 448/528 (84%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 121 gaggtgacggtctatgatctcagacacggtctccaggaacaggttctcactcgtccccgg 180 |||||||||||| ||||| ||||| || || || | ||||| ||| ||||| | ||| || Sbjct: 212 gaggtgacggtccatgatttcagatacagtttctaagaacatgttttcactggaccctgg 271 Query: 181 gagaacggcgtcctccgcttcctggatgatgtcctcgatcacagagtctctattcacagt 240 |||||| || ||||| |||||||| ||||||||||| ||| |||| || ||||||||||| Sbjct: 272 gagaacagcatcctctgcttcctgaatgatgtcctcaatctcagactccctattcacagt 331 Query: 241 ttccctgcacagtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttctt 300 ||||||||| ||||| || ||||||||||| ||||||| || || || || || ||||| Sbjct: 332 ttccctgcatagtatgcgccctatgtcatatggtgtgaagccacgagctgcacctttctt 391 Query: 301 caggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtg 360 || |||||||||||||||||||| ||||| ||||| | | || |||||||||||| || Sbjct: 392 caaaagcatggtgctgatgcgcagaacacgagcgcatcgtggaggcagctcccacccatg 451 Query: 361 gaacctgagaagcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttc 420 |||| |||||||||||||||| ||||| || ||||| |||| |||||| |||||||||| Sbjct: 452 gaacttgagaagcttgatgtcttcttcagcatcgagtgatttgatgtattcaatggtttc 511 Query: 421 attgctaaaccgctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 480 || | || ||||||||||||| |||||||| ||||||||||| |||||||| ||||| Sbjct: 512 atcattgaatggctcacgggcttggggccagtagagccactcaaatgtacaatcttcaaa 571 Query: 481 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 538 ||||||||||| ||||||||||||||||||||||||||||||| || || |||| ||| Sbjct: 572 cttctctggcaagcaataaccatgatcaattggaatcagcttgtagttgccaccttctct 631 Query: 539 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 597 |||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 632 ctccttgcacactagaatattcccagcatgacgatcagcattagctaacctaatatctag 691 Query: 598 cactgctattttgtggacctccttcaccgggaaagcacgaggacccat 645 ||||||||||| || |||||||| || || |||| ||||||||||| Sbjct: 692 tactgctattttatgaacctccttgacaggaaaaggtcgaggacccat 739 Score = 48.1 bits (24), Expect = 0.037 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 42 atacttacagcaaaccggatacag-----ac-gaacaactagatcagttattctga 91 ||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 134 atacttacaacaaaccggatacagctggaactgaacaactagatcagttattctga 189
>dbj|AK061872.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A05, full insert sequence Length = 1080 Score = 379 bits (191), Expect = e-102 Identities = 361/417 (86%), Gaps = 3/417 (0%) Strand = Plus / Minus Query: 192 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 251 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 884 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 825 Query: 252 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcaggagcatgg 311 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 824 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 765 Query: 312 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 371 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 764 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 705 Query: 372 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 431 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 704 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 645 Query: 432 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggca 491 | ||||| || || |||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 644 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaacttctctggca 585 Query: 492 ggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct---tccttggaca 548 ||| ||||||||||||||||||| || |||| | || |||| ||| |||||| ||| Sbjct: 584 agcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttcatccttgcaca 525 Query: 549 ctagaatgttccctgcatgacgatcagcattcgctaacctaatatctaacactgcta 605 ||| |||||||||||||||||||||||| || |||||||||| |||||||||||||| Sbjct: 524 ctaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaacactgcta 468 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 58 ggatacagacgaacaactagatcagttattctg 90 |||||||| ||||||||||||||||||||||| Sbjct: 1011 ggatacagctgaacaactagatcagttattctg 979
>gb|BT024182.1| Zea mays clone EL01N0414H08 mRNA sequence Length = 1514 Score = 347 bits (175), Expect = 3e-92 Identities = 442/529 (83%), Gaps = 4/529 (0%) Strand = Plus / Minus Query: 120 ggaggtgacggtctatgatctcagacacggtctccaggaacaggttctcactcgtccccg 179 ||||||||||||| ||||| ||||| | || || | ||||| ||| ||||| | || | Sbjct: 1293 ggaggtgacggtccatgatttcagataaagtttctaagaacatgttttcactggaccatg 1234 Query: 180 ggagaacggcgtcctccgcttcctggatgatgtcctcgatcacagagtctctattcacag 239 ||||||| || ||||| |||||||| |||||| |||| ||| ||||||| |||||||||| Sbjct: 1233 ggagaacagcatcctctgcttcctgaatgatgacctcaatctcagagtccctattcacag 1174 Query: 240 tttccctgcacagtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttct 299 |||||||||| ||||| || |||||||||||||| |||| || || | || || |||| Sbjct: 1173 tttccctgcatagtatgcgccctatgtcatagggcgtgaagccacgagatgcacctttct 1114 Query: 300 tcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgt 359 ||| ||||| |||||||||||||||||||| || || | | || |||||||||||| | Sbjct: 1113 tcaaaagcattgtgctgatgcgcaggacacgagcacaccgtggaggcagctcccacccat 1054 Query: 360 ggaacctgagaagcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggttt 419 ||| | |||||||||||||||| ||||| || ||||| |||| |||||| ||||||||| Sbjct: 1053 ggatcttgagaagcttgatgtcttcttcagcatcgagtgatttgatgtattcaatggttt 994 Query: 420 cattgctaaaccgctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaa 479 ||| | || ||||||||||||| |||||||| ||||||||||| |||||||| |||| Sbjct: 993 catcattgaatggctcacgggcttggggccagtagagccactcaaatgtacaatcttcaa 934 Query: 480 acttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct- 538 ||||||||||| ||| ||||||||||||||||||||||||||| || || |||| ||| Sbjct: 933 -cttctctggcaagcagtaaccatgatcaattggaatcagcttgtagttgccaccttctc 875 Query: 539 --tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatcta 596 |||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 874 tctccttgcacactagaatattcccagcatgacgatcagcattagctaacctaatatcta 815 Query: 597 acactgctattttgtggacctccttcaccgggaaagcacgaggacccat 645 ||||||||||| || |||||||| || || |||| ||||||||||| Sbjct: 814 gtactgctattttatgaacctccttgacaggaaaaggtcgaggacccat 766
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 268 bits (135), Expect = 2e-68 Identities = 252/291 (86%) Strand = Plus / Plus Query: 192 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 251 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 13445112 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 13445171 Query: 252 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcaggagcatgg 311 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 13445172 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 13445231 Query: 312 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 371 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 13445232 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 13445291 Query: 372 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 431 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 13445292 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 13445351 Query: 432 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 | ||||| || || |||||||| |||||||||||||||||||| ||||||| Sbjct: 13445352 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaact 13445402 Score = 174 bits (88), Expect = 2e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 481 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 538 ||||||||||| ||| ||||||||||||||||||| || |||| | || |||| ||| Sbjct: 13445495 cttctctggcaagcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttc 13445554 Query: 539 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 597 |||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 13445555 atccttgcacactaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaa 13445614 Query: 598 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||||||||||||||||||||||||| || || || || |||||||| ||||||||||| Sbjct: 13445615 cactgctattttgtggacctccttcactggaaatgctcggggacccatatcctcacaact 13445674 Query: 658 tc 659 || Sbjct: 13445675 tc 13445676 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 58 ggatacagacgaacaactagatcagttattctg 90 |||||||| ||||||||||||||||||||||| Sbjct: 13444985 ggatacagctgaacaactagatcagttattctg 13445017
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 268 bits (135), Expect = 2e-68 Identities = 252/291 (86%) Strand = Plus / Plus Query: 192 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 251 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 106544 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 106603 Query: 252 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcaggagcatgg 311 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 106604 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 106663 Query: 312 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 371 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 106664 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 106723 Query: 372 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 431 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 106724 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 106783 Query: 432 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 | ||||| || || |||||||| |||||||||||||||||||| ||||||| Sbjct: 106784 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaact 106834 Score = 174 bits (88), Expect = 2e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 481 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 538 ||||||||||| ||| ||||||||||||||||||| || |||| | || |||| ||| Sbjct: 106927 cttctctggcaagcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttc 106986 Query: 539 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 597 |||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 106987 atccttgcacactaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaa 107046 Query: 598 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||||||||||||||||||||||||| || || || || |||||||| ||||||||||| Sbjct: 107047 cactgctattttgtggacctccttcactggaaatgctcggggacccatatcctcacaact 107106 Query: 658 tc 659 || Sbjct: 107107 tc 107108 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 58 ggatacagacgaacaactagatcagttattctg 90 |||||||| ||||||||||||||||||||||| Sbjct: 106417 ggatacagctgaacaactagatcagttattctg 106449
>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0428A03 Length = 136799 Score = 268 bits (135), Expect = 2e-68 Identities = 252/291 (86%) Strand = Plus / Plus Query: 192 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 251 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 56536 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 56595 Query: 252 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcaggagcatgg 311 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 56596 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 56655 Query: 312 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 371 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 56656 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 56715 Query: 372 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 431 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 56716 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 56775 Query: 432 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 | ||||| || || |||||||| |||||||||||||||||||| ||||||| Sbjct: 56776 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaact 56826 Score = 174 bits (88), Expect = 2e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 481 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 538 ||||||||||| ||| ||||||||||||||||||| || |||| | || |||| ||| Sbjct: 56919 cttctctggcaagcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttc 56978 Query: 539 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 597 |||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 56979 atccttgcacactaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaa 57038 Query: 598 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||||||||||||||||||||||||| || || || || |||||||| ||||||||||| Sbjct: 57039 cactgctattttgtggacctccttcactggaaatgctcggggacccatatcctcacaact 57098 Query: 658 tc 659 || Sbjct: 57099 tc 57100 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 58 ggatacagacgaacaactagatcagttattctg 90 |||||||| ||||||||||||||||||||||| Sbjct: 56409 ggatacagctgaacaactagatcagttattctg 56441
>ref|XM_465025.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2621 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaa 496 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1946 cgggcttggggccagtagagccactcaaaggtacaatcttcaaacttctctggcaggcag 1887 Query: 497 taaccatgatcaattggaatca 518 || ||||||||||||||||||| Sbjct: 1886 tacccatgatcaattggaatca 1865 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 554 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 613 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 1829 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 1770 Query: 614 acctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||| || || |||||||| ||||| ||||| ||||||||||| Sbjct: 1769 acctctttaactgggaaagctcgagggcccatatcctcacaact 1726 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 293 cccttcttcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 352 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 2090 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 2031 Query: 353 cacccgtggaacctgagaagc 373 |||||||||||| |||||||| Sbjct: 2030 cacccgtggaacttgagaagc 2010
>dbj|AK065628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027K22, full insert sequence Length = 2621 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaa 496 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1946 cgggcttggggccagtagagccactcaaaggtacaatcttcaaacttctctggcaggcag 1887 Query: 497 taaccatgatcaattggaatca 518 || ||||||||||||||||||| Sbjct: 1886 tacccatgatcaattggaatca 1865 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 554 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 613 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 1829 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 1770 Query: 614 acctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||| || || |||||||| ||||| ||||| ||||||||||| Sbjct: 1769 acctctttaactgggaaagctcgagggcccatatcctcacaact 1726 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 293 cccttcttcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 352 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 2090 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 2031 Query: 353 cacccgtggaacctgagaagc 373 |||||||||||| |||||||| Sbjct: 2030 cacccgtggaacttgagaagc 2010
>dbj|AK061705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-E06, full insert sequence Length = 1204 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaa 496 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 cgggcttggggccagtagagccactcaaaggtacaatcttcaaacttctctggcaggcag 470 Query: 497 taaccatgatcaattggaatca 518 || ||||||||||||||||||| Sbjct: 469 tacccatgatcaattggaatca 448 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 554 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 613 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 412 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 353 Query: 614 acctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||| || || |||||||| ||||| ||||| ||||||||||| Sbjct: 352 acctctttaactgggaaagctcgagggcccatatcctcacaact 309 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 293 cccttcttcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 352 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 673 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 614 Query: 353 cacccgtggaacctgagaagc 373 |||||||||||| |||||||| Sbjct: 613 cacccgtggaacttgagaagc 593
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 10994024 cgggcttggggccagtagagccactcaaaggtacaatcttcaaact 10994069 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 554 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 613 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 10994507 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 10994566 Query: 614 acctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||| || || |||||||| ||||| ||||| ||||||||||| Sbjct: 10994567 acctctttaactgggaaagctcgagggcccatatcctcacaact 10994610 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 481 cttctctggcaggcaataaccatgatcaattggaatca 518 ||||||||||||||| || ||||||||||||||||||| Sbjct: 10994434 cttctctggcaggcagtacccatgatcaattggaatca 10994471 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Plus Query: 293 cccttcttcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 352 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 10993880 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 10993939 Query: 353 cacccgtggaacctgagaagc 373 |||||||||||| |||||||| Sbjct: 10993940 cacccgtggaacttgagaagc 10993960
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 20687 cgggcttggggccagtagagccactcaaaggtacaatcttcaaact 20732 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 554 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 613 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 21170 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 21229 Query: 614 acctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||| || || |||||||| ||||| ||||| ||||||||||| Sbjct: 21230 acctctttaactgggaaagctcgagggcccatatcctcacaact 21273 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 481 cttctctggcaggcaataaccatgatcaattggaatca 518 ||||||||||||||| || ||||||||||||||||||| Sbjct: 21097 cttctctggcaggcagtacccatgatcaattggaatca 21134 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Plus Query: 293 cccttcttcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 352 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 20543 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 20602 Query: 353 cacccgtggaacctgagaagc 373 |||||||||||| |||||||| Sbjct: 20603 cacccgtggaacttgagaagc 20623
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 200223 cgggcttggggccagtagagccactcaaaggtacaatcttcaaact 200268 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 554 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 613 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 200706 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 200765 Query: 614 acctccttcaccgggaaagcacgaggacccatgtcctcacaact 657 ||||| || || |||||||| ||||| ||||| ||||||||||| Sbjct: 200766 acctctttaactgggaaagctcgagggcccatatcctcacaact 200809 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 481 cttctctggcaggcaataaccatgatcaattggaatca 518 ||||||||||||||| || ||||||||||||||||||| Sbjct: 200633 cttctctggcaggcagtacccatgatcaattggaatca 200670 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Plus Query: 293 cccttcttcaggagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 352 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 200079 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 200138 Query: 353 cacccgtggaacctgagaagc 373 |||||||||||| |||||||| Sbjct: 200139 cacccgtggaacttgagaagc 200159
>ref|NM_105121.2| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT1G64460 mRNA, complete cds Length = 1095 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 440 gcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaataa 499 ||||| |||||||| ||||||||||| || ||||| ||||| ||||| |||| |||||| Sbjct: 569 gcttgcggccagtagagccactcaaatgtgcaatcttcaaaattctcgggcaaacaataa 510 Query: 500 ccatgatcaattggaat 516 |||||||| || ||||| Sbjct: 509 ccatgatcgatgggaat 493
>gb|BT010909.1| Arabidopsis thaliana At1g64460 mRNA, complete cds Length = 906 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 440 gcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaataa 499 ||||| |||||||| ||||||||||| || ||||| ||||| ||||| |||| |||||| Sbjct: 569 gcttgcggccagtagagccactcaaatgtgcaatcttcaaaattctcgggcaaacaataa 510 Query: 500 ccatgatcaattggaat 516 |||||||| || ||||| Sbjct: 509 ccatgatcgatgggaat 493
>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence Length = 128575 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 488 ggcaggcaataaccatgatcaattggaatcag 519 |||||||||||||||||||||||||||||||| Sbjct: 88478 ggcaggcaataaccatgatcaattggaatcag 88447
>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence Length = 157258 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 488 ggcaggcaataaccatgatcaattggaatcag 519 |||||||||||||||||||||||||||||||| Sbjct: 44926 ggcaggcaataaccatgatcaattggaatcag 44895
>ref|NM_188652.1| Oryza sativa (japonica cultivar-group), Ozsa8255 predicted mRNA Length = 1767 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 440 gcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaataa 499 ||||| |||||||||||||| ||||| || || || ||||| | || ||||| ||||| Sbjct: 1430 gcttggggccagtaaagccaatcaaatgtgcagtcttcaaagctttcaggcagacaatac 1371 Query: 500 ccatgatcaattggaatcagct 521 |||||||||||||| ||||||| Sbjct: 1370 ccatgatcaattggtatcagct 1349
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 440 gcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 18976 gcttgaggccagtaaagccaatcaaatgtgcaatcttcaaact 18934
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 440 gcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 ||||| |||||||| ||||||||||| || ||||| ||||||| Sbjct: 12313 gcttgcggccagtagagccactcaaatgtgcaatcttcaaact 12355
>ref|XM_476005.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1839 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 622 caccgggaaagcacgaggacccatgtcctc 651 ||||||||| |||||||| ||||||||||| Sbjct: 1218 caccgggaacgcacgaggtcccatgtcctc 1189
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 622 caccgggaaagcacgaggacccatgtcctc 651 ||||||||| |||||||| ||||||||||| Sbjct: 46751 caccgggaacgcacgaggtcccatgtcctc 46722 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 446 ggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| |||||||| || || ||||||||||||| Sbjct: 47013 ggccagtagagccactcgaatgtgcaatcctcaaact 46977
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 622 caccgggaaagcacgaggacccatgtcctc 651 ||||||||| |||||||| ||||||||||| Sbjct: 89516 caccgggaacgcacgaggtcccatgtcctc 89487 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 446 ggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| |||||||| || || ||||||||||||| Sbjct: 89778 ggccagtagagccactcgaatgtgcaatcctcaaact 89742
>gb|AC067746.7| Homo sapiens chromosome 10 clone RP11-408L20, complete sequence Length = 189545 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 615 cctccttcaccgggaaagcacg 636 |||||||||||||||||||||| Sbjct: 87911 cctccttcaccgggaaagcacg 87932
>gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 map CIC02E07, complete sequence Length = 95214 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct: 70783 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaact 70828
>gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 map CIC06C03, complete sequence Length = 84825 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct: 11721 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaact 11766
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 622 caccgggaaagcacgaggacccatgtcctc 651 ||||||||| |||||||| ||||||||||| Sbjct: 29163292 caccgggaacgcacgaggtcccatgtcctc 29163263 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 446 ggccagtaaagccactcaaaggtacaatcctcaaact 482 |||||||| |||||||| || || ||||||||||||| Sbjct: 29163554 ggccagtagagccactcgaatgtgcaatcctcaaact 29163518
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 488 ggcaggcaataaccatgatcaattggaatcagct 521 ||||| ||||| |||||||||||||| ||||||| Sbjct: 7443804 ggcagacaatacccatgatcaattggtatcagct 7443837
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 488 ggcaggcaataaccatgatcaattggaatcagct 521 ||||| ||||| |||||||||||||| ||||||| Sbjct: 104832 ggcagacaatacccatgatcaattggtatcagct 104865
>dbj|AK072823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139A09, full insert sequence Length = 2303 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 622 caccgggaaagcacgaggacccatgtcctc 651 ||||||||| |||||||| ||||||||||| Sbjct: 1531 caccgggaacgcacgaggtcccatgtcctc 1502
>gb|AC005364.1| Homo sapiens chromosome 16, cosmid clone 53H2 (LANL), complete sequence Length = 36342 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 455 agccactcaaaggtacaatcctcaa 479 |||||||||||||||||||| |||| Sbjct: 529 agccactcaaaggtacaatcgtcaa 553
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 455 agccactcaaaggtacaatcctcaa 479 |||||||||||||||||||| |||| Sbjct: 21317 agccactcaaaggtacaatcgtcaa 21341
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 cttgccgaggaggtgacggtctatg 136 |||||||||| |||||||||||||| Sbjct: 3707130 cttgccgagggggtgacggtctatg 3707106
>emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chromosome 1p22.3-31.2 Contains the 3' end of a novel gene (KIAA1229), complete sequence Length = 136387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttctaaacagatattacttg 115 ||||||||||||||||||||| Sbjct: 96476 tttctaaacagatattacttg 96496
>gb|AC105306.13| Bos taurus clone rp42-158g13, complete sequence Length = 196377 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 agatcagttattctgagtgtt 96 ||||||||||||||||||||| Sbjct: 14179 agatcagttattctgagtgtt 14199
>gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complete sequence Length = 164706 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 tagatcagttattctgagtgtttct 99 ||||||| ||||||||||||||||| Sbjct: 54885 tagatcaattattctgagtgtttct 54909
>gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, complete sequence Length = 191731 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 cctatgtcatagggtgtgaga 280 ||||||||||||||||||||| Sbjct: 99904 cctatgtcatagggtgtgaga 99884
>gb|AC068584.11| Homo sapiens chromosome 17, clone RP11-450A4, complete sequence Length = 65598 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gagctggtctggggcagtgcc 32 ||||||||||||||||||||| Sbjct: 13363 gagctggtctggggcagtgcc 13343
>gb|AC068014.16| Homo sapiens chromosome 17, clone RP11-567O16, complete sequence Length = 148509 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 gagctggtctggggcagtgcc 32 ||||||||||||||||||||| Sbjct: 8101 gagctggtctggggcagtgcc 8121
>ref|NM_201971.1| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT2G46500 transcript variant AT2G46500.2 mRNA, complete cds Length = 2138 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 480 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1621 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1578
>ref|NM_130214.2| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT2G46500 transcript variant AT2G46500.1 mRNA, complete cds Length = 2311 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 480 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1794 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1751
>ref|NM_122330.1| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT5G24240 mRNA, complete cds Length = 1725 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 440 gcttgaggccagtaaagccactcaaaggtacaatcctcaaactt 483 |||||||||||||| ||||| || || || ||||| |||||||| Sbjct: 1385 gcttgaggccagtatagccattcgaatgtgcaatcttcaaactt 1342
>ref|NM_181729.1| Mus musculus mucin 6, gastric (Muc6), mRNA Length = 8787 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcccttcttcaggagcatgg 311 |||||||||||||||||||| Sbjct: 1935 gcccttcttcaggagcatgg 1916
>ref|NM_185924.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2634 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cccttcttcaggagcatggtgctg 316 ||||||||||||||||||| |||| Sbjct: 2307 cccttcttcaggagcatggagctg 2330
>gb|AC164070.5| Mus musculus chromosome 7, clone RP24-292L1, complete sequence Length = 200080 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gcccttcttcaggagcatgg 311 |||||||||||||||||||| Sbjct: 155374 gcccttcttcaggagcatgg 155393
>gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, complete sequence Length = 179042 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 aatgtatgcaatggtttcattgct 426 ||||||||||||||| |||||||| Sbjct: 77639 aatgtatgcaatggtgtcattgct 77662
>gb|AC102524.11| Mus musculus chromosome 7, clone RP24-75A18, complete sequence Length = 193924 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gcccttcttcaggagcatgg 311 |||||||||||||||||||| Sbjct: 159404 gcccttcttcaggagcatgg 159423
>emb|AL513409.1|NCB11O9 Neurospora crassa DNA linkage group II BAC clone B11O9 Length = 71085 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 cctggatgatgtcctcgatcacag 224 ||||||||||||||||| |||||| Sbjct: 31621 cctggatgatgtcctcgttcacag 31598
>emb|CR626903.5| Zebrafish DNA sequence from clone CH211-262A22 in linkage group 16, complete sequence Length = 143457 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 aatgtatgcaatggtttcat 422 |||||||||||||||||||| Sbjct: 36064 aatgtatgcaatggtttcat 36083
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 cagctcccacccgtggaacctgag 369 |||||||||||||| ||||||||| Sbjct: 143751 cagctcccacccgttgaacctgag 143728
>gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, complete sequence Length = 203259 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 acagagtctctattcacagt 240 |||||||||||||||||||| Sbjct: 91688 acagagtctctattcacagt 91707
>gb|AF419566.1|AF419566 Arabidopsis thaliana At2g46500/F11C10.19 mRNA, complete cds Length = 2304 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 480 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1790 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1747
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cccttcttcaggagcatggtgctg 316 ||||||||||||||||||| |||| Sbjct: 27005718 cccttcttcaggagcatggagctg 27005695
>emb|BX819749.1|CNS0AA14 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2087 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 480 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1595 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1552
>gb|AC157531.2| Pan troglodytes BAC clone CH251-277G13 from chromosome unknown, complete sequence Length = 183251 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 acagagtctctattcacagt 240 |||||||||||||||||||| Sbjct: 53727 acagagtctctattcacagt 53708
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence Length = 195263 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcgctaacctaatatct 595 |||||||||||||||||||| Sbjct: 153305 cattcgctaacctaatatct 153286
>dbj|AB125314.1| Nannochloris bacillaris NbrbcS2, Akl, NbSep, PABP1 genes for ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit, arabinose kinase-like protein, CDC10 cell division cycle 10 homolog, poly(A) binding protein I, partial and complete cds Length = 11337 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tctctattcacagtttccct 246 |||||||||||||||||||| Sbjct: 5493 tctctattcacagtttccct 5512
>gb|AY184385.1|AH012557S1 Mus musculus MUC6 (Muc6) gene, exons 1 through 16 Length = 6745 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcccttcttcaggagcatgg 311 |||||||||||||||||||| Sbjct: 6428 gcccttcttcaggagcatgg 6409
>gb|BT002694.1| Arabidopsis thaliana At2g46500/F11C10.19 gene, complete cds Length = 1701 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 480 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1364 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1321
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cccttcttcaggagcatggtgctg 316 ||||||||||||||||||| |||| Sbjct: 70196 cccttcttcaggagcatggagctg 70173
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tggatgatgtcctcgatcac 222 |||||||||||||||||||| Sbjct: 8525526 tggatgatgtcctcgatcac 8525545
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cccttcttcaggagcatggtgctg 316 ||||||||||||||||||| |||| Sbjct: 8959 cccttcttcaggagcatggagctg 8936
>dbj|AK111216.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B05, full insert sequence Length = 2634 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cccttcttcaggagcatggtgctg 316 ||||||||||||||||||| |||| Sbjct: 2307 cccttcttcaggagcatggagctg 2330
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ttcaatgtatgcaatggttt 419 |||||||||||||||||||| Sbjct: 1454859 ttcaatgtatgcaatggttt 1454878
>gb|AC007795.1|AC007795 Homo sapiens chromosome 19, cosmid F19415, complete sequence Length = 45896 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttcacagtttccctgcacag 252 |||||||||||||||||||| Sbjct: 1321 ttcacagtttccctgcacag 1340
>emb|AJ511867.1|MMU511867 Mus musculus partial Muc6 gene for secreted gel-forming mucin, exons 1-16 and joined CDS Length = 6728 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcccttcttcaggagcatgg 311 |||||||||||||||||||| Sbjct: 6411 gcccttcttcaggagcatgg 6392
>dbj|AP004895.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT02D01, TM0039, complete sequence Length = 91268 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 gcaataaccatgatcaattggaat 516 |||||| ||||||||||||||||| Sbjct: 45703 gcaatagccatgatcaattggaat 45726
>dbj|AB007132.1| Streptoverticillium cinnamoneum gene for Phospholipase D, complete cds Length = 1868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 gtgagacctcgcgcagcgcc 294 |||||||||||||||||||| Sbjct: 364 gtgagacctcgcgcagcgcc 345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,882,417 Number of Sequences: 3902068 Number of extensions: 4882417 Number of successful extensions: 99804 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99424 Number of HSP's gapped (non-prelim): 357 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)