>MUS81_ASHGO (Q754C9) Crossover junction endonuclease MUS81 (EC 3.1.22.-)|
          Length = 604

 Score = 33.1 bits (74), Expect = 0.79
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 512 DIVSKTYCDVDRKLWVPASFNVRLHVDHLNSQDKLPKDF 396
           DIV   +     +LW P S+++ L++DH   + K  +DF
Sbjct: 300 DIVKARWNGTSYELWKPGSYDIELYIDHREVRAKSERDF 338

>CUBN_CANFA (Q9TU53) Cubilin precursor|
          Length = 3620

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -1

Query: 349 CSSDRLLNGKVRIELRSTFHILVGRCVCPSQELASLCHRGKCPCRRWSGDRV-CPQKEQR 173
           CSS+   NG   + L  +F      C+CPSQ    LC      C+ +SG  + C      
Sbjct: 133 CSSNPCQNGGTCLNLHDSFF-----CICPSQWKGPLCSVDVNECQIYSGTPLGCQNGATC 187

Query: 172 QPALGFFSETC 140
           +   G +S  C
Sbjct: 188 ENTAGSYSCLC 198

>SLAP_BACCI (P35824) S-layer-related protein precursor|
          Length = 1616

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 44   TKFTKYAIMNSLGSSQHDPRSTDACTWDWGLP 139
            ++F   A+++S G     P  T A TW+WG P
Sbjct: 955  SRFGVEAVVDSSGKVTSVPNKTQAMTWNWGKP 986

>CUBN_RAT (O70244) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
           (Intrinsic factor-vitamin B12 receptor) (Glycoprotein
           280) (gp280) (460 kDa receptor)
          Length = 3623

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -1

Query: 349 CSSDRLLNGKVRIELRSTFHILVGRCVCPSQELASLCHRGKCPCRRWSG 203
           CSS+  LNG   + L  +F      C+CPSQ     C      C  +SG
Sbjct: 133 CSSNPCLNGGTCVNLHDSFV-----CICPSQWKGLFCSEDVNECVVYSG 176

>LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Kalinin|
           B1 chain)
          Length = 1168

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -1

Query: 274 CVC-PSQELASLCHR--GKCPCRRWSGDRVCPQKEQRQ 170
           C C P   L+S C++  G+CPCR   G   C     RQ
Sbjct: 478 CACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQ 515

>WIF1_XENLA (Q9W6F8) Wnt inhibitory factor 1 precursor (WIF-1)|
          Length = 374

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 280 GRCVCPSQELASLCHRGKC--PCRRWSGDRVCPQKEQRQPALGFFSETC 140
           G+C+CPS      C   KC  PCR  +G + C  K + + + G+  + C
Sbjct: 255 GKCICPSGYEGEQCETSKCQQPCR--NGGK-CSGKNKCKCSKGYQGDLC 300

>YNC3_YEAST (P53971) RING finger protein YNL023C|
          Length = 965

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
 Frame = -1

Query: 268 CPSQELASLCHRGKCP--CRRWSGDRVCPQKEQRQPA---LGFFSETCR*SPIPCTRICR 104
           C   +    CH GKCP      S D VCP      PA    G    TC     PC ++ R
Sbjct: 468 CGIHKCQRKCHPGKCPPCLESDSNDLVCPCGNTVVPAPVRCGTKLPTCN---HPCIKVVR 524

Query: 103 PRIVLRTPKTVHDCIFCEL-CSVCTQ 29
                      H C   ++ C  CT+
Sbjct: 525 GESTCGHKPMPHTCHSLDVSCPPCTE 550


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,480,804
Number of Sequences: 219361
Number of extensions: 2072031
Number of successful extensions: 4928
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4923
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)