ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15a16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ238318.1|OSA238318 Oryza sativa mRNA for phosphatidylinosi... 98 4e-17
2dbj|AK071004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
3ref|XM_463937.1| Oryza sativa (japonica cultivar-group), mRNA 90 9e-15
4ref|XM_506698.1| PREDICTED Oryza sativa (japonica cultivar-group... 90 9e-15
5dbj|AK104814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
6dbj|AK072529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
7gb|AY370763.1| Zea mays phosphatidylinositol synthase (PIS) mRNA... 76 1e-10
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
9dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
10dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
11gb|AY112631.1| Zea mays CL19015_1 mRNA sequence 64 5e-07
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
13dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
14dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
15gb|AY112475.1| Zea mays CL165_1 mRNA sequence 52 0.002
16ref|NM_120018.2| Arabidopsis thaliana unknown protein AT4G38570 ... 50 0.008
17gb|AF521301.1| Brassica napus phosphatidylinositol synthase mRNA... 50 0.008
18emb|BX826559.1|CNS0A40I Arabidopsis thaliana Full-length cDNA Co... 50 0.008
19emb|BX827703.1|CNS0A2ES Arabidopsis thaliana Full-length cDNA Co... 50 0.008
20emb|BX827396.1|CNS0A2GL Arabidopsis thaliana Full-length cDNA Co... 50 0.008
21gb|AY086801.1| Arabidopsis thaliana clone 27810 mRNA, complete s... 50 0.008
22gb|BT002432.1| Arabidopsis thaliana putative phosphatidylinosito... 50 0.008
23gb|AC073203.9| Homo sapiens BAC clone RP11-313M4 from 7, complet... 46 0.12
24gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, compl... 46 0.12
25ref|NM_105470.1| Arabidopsis thaliana ATPIS1; CDP-diacylglycerol... 44 0.48
26gb|AY140047.1| Arabidopsis thaliana phosphatidylinositol synthas... 44 0.48
27emb|BX818735.1|CNS0AE8H Arabidopsis thaliana Full-length cDNA Co... 44 0.48
28emb|BX841900.1|CNS09Y4X Arabidopsis thaliana Full-length cDNA Co... 44 0.48
29gb|AY087327.1| Arabidopsis thaliana clone 34210 mRNA, complete s... 44 0.48
30emb|AJ000539.1|ATPIS1 Arabidopsis thaliana mRNA for phosphatidyl... 44 0.48
31emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 44 0.48
32emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ... 42 1.9
33gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana... 42 1.9
34emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, B... 42 1.9
35emb|CR712342.2|CNS0GCLE Tetraodon nigroviridis full-length cDNA 40 7.6
36emb|CR721882.2|CNS0GJY8 Tetraodon nigroviridis full-length cDNA 40 7.6
37emb|CR721156.2|CNS0GJE2 Tetraodon nigroviridis full-length cDNA 40 7.6
38emb|CR719979.2|CNS0GIHD Tetraodon nigroviridis full-length cDNA 40 7.6
39emb|CR719908.2|CNS0GIFE Tetraodon nigroviridis full-length cDNA 40 7.6
40emb|CR718663.2|CNS0GHGT Tetraodon nigroviridis full-length cDNA 40 7.6
41emb|CR718475.2|CNS0GHBL Tetraodon nigroviridis full-length cDNA 40 7.6
42emb|CR713666.2|CNS0GDM6 Tetraodon nigroviridis full-length cDNA 40 7.6
43emb|CR703790.2|CNS0G5ZU Tetraodon nigroviridis full-length cDNA 40 7.6
44emb|CR700941.2|CNS0G3SP Tetraodon nigroviridis full-length cDNA 40 7.6
45emb|CR694812.2|CNS0FZ2G Tetraodon nigroviridis full-length cDNA 40 7.6
46emb|CR694333.2|CNS0FYP5 Tetraodon nigroviridis full-length cDNA 40 7.6
47emb|CR692283.2|CNS0FX47 Tetraodon nigroviridis full-length cDNA 40 7.6
48emb|CR688183.2|CNS0FTYB Tetraodon nigroviridis full-length cDNA 40 7.6
49emb|CR686176.2|CNS0FSEK Tetraodon nigroviridis full-length cDNA 40 7.6
50emb|CR685282.2|CNS0FRPQ Tetraodon nigroviridis full-length cDNA 40 7.6
51emb|CR676633.2|CNS0FL1X Tetraodon nigroviridis full-length cDNA 40 7.6
52gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 40 7.6
53gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete s... 40 7.6
54gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete se... 40 7.6
55ref|NM_001030530.1| Xenopus tropicalis pex11a protein (pex11a), ... 40 7.6
56gb|BC090557.1| Xenopus tropicalis pex11a protein, mRNA (cDNA clo... 40 7.6
57emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chr... 40 7.6
58emb|AL137122.8| Human DNA sequence from clone RP1-119J15 on chro... 40 7.6
59emb|AL121837.33|HSJ988J12 Human DNA sequence from clone RP5-988J... 40 7.6
60gb|AC161939.4| Mus musculus 10 BAC RP24-364P6 (Roswell Park Canc... 40 7.6
61gb|AC091972.2| Homo sapiens chromosome 5 clone RP11-511M9, compl... 40 7.6
62gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Can... 40 7.6
63gb|AC103817.6| Homo sapiens chromosome 8, clone CTD-3083F21, com... 40 7.6
64dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
65dbj|AP004136.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
66gb|AC117584.11| Mus musculus chromosome 3, clone RP23-151D16, co... 40 7.6
67emb|AL356806.4|CNS05TDO Human chromosome 14 DNA sequence BAC C-2... 40 7.6
68emb|AL671741.9| Mouse DNA sequence from clone RP23-336M6 on chro... 40 7.6
69emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chrom... 40 7.6
70emb|AL161415.2|CNS01RH5 Human chromosome 14 DNA sequence BAC R-1... 40 7.6 
>emb|AJ238318.1|OSA238318 Oryza sativa mRNA for phosphatidylinositol synthase
          Length = 1082

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 154/189 (81%)
 Strand = Plus / Minus

                                                                       
Query: 354 catttttgctcacttgcctcttttcgaatcgaacgccacacaagcatctgcagctgtttt 413
           ||||| |||||||||||| |  ||| |||| ||| | || || || ||||| |||| |||
Sbjct: 890 catttctgctcacttgccgcgcttcaaatcaaacacaacgcacgcgtctgcggctgattt 831

                                                                       
Query: 414 catctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaacat 473
           ||||||||| ||||||||||||||||| |  ||||| |||| |||||||||||| || | 
Sbjct: 830 catctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaatgaaaaa 771

                                                                       
Query: 474 gaagacaactaggggactttccttcagaatacctctgcacgtattaagcaagcttgtgga 533
           |||||||   || ||||||| ||||||||    || ||||  ||||||||||||||| ||
Sbjct: 770 gaagacagtgagaggactttgcttcagaaggtttccgcacacattaagcaagcttgttga 711

                    
Query: 534 cttctcatc 542
           |||||||||
Sbjct: 710 cttctcatc 702
to top
>dbj|AK071004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076M04, full
           insert sequence
          Length = 1433

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaacatgaa 476
           |||||||| ||||||||||||||| | |||||| |||| ||||||||||||||| | |||
Sbjct: 696 ctggatgatattgatcacttgttttaatgcccaaccaactagagttgaaataaaaacgaa 637

                                                                       
Query: 477 gacaactaggggactttccttcagaatacctctgcacgtattaagcaagcttgtggactt 536
           || |   || |||||| |||| ||||  | |||||||  ||||||||||||||| || ||
Sbjct: 636 gaaagtgagaggacttccctttagaaagcatctgcacacattaagcaagcttgtcgattt 577

                     
Query: 537 ctcatcagca 546
           ||||||||||
Sbjct: 576 ctcatcagca 567
to top
>ref|XM_463937.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1177

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 153/189 (80%)
 Strand = Plus / Minus

                                                                       
Query: 354 catttttgctcacttgcctcttttcgaatcgaacgccacacaagcatctgcagctgtttt 413
           ||||| |||||||||||| |  ||| |||| ||| | || || || ||||| |||| |||
Sbjct: 926 catttctgctcacttgccgcgcttcaaatcaaacacaacgcacgcgtctgcggctgattt 867

                                                                       
Query: 414 catctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaacat 473
           ||||||||| ||||||||||||||||| |  ||||| |||| |||||||||||| || | 
Sbjct: 866 catctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaatgaaaac 807

                                                                       
Query: 474 gaagacaactaggggactttccttcagaatacctctgcacgtattaagcaagcttgtgga 533
            ||||||   || ||||||| ||||||||    || ||||  ||||||||||||||| ||
Sbjct: 806 aaagacagtgagaggactttgcttcagaaggtttccgcacacattaagcaagcttgttga 747

                    
Query: 534 cttctcatc 542
           |||||||||
Sbjct: 746 cttctcatc 738
to top
>ref|XM_506698.1| PREDICTED Oryza sativa (japonica cultivar-group), P0575F10.15 mRNA
          Length = 1324

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 153/189 (80%)
 Strand = Plus / Minus

                                                                       
Query: 354 catttttgctcacttgcctcttttcgaatcgaacgccacacaagcatctgcagctgtttt 413
           ||||| |||||||||||| |  ||| |||| ||| | || || || ||||| |||| |||
Sbjct: 987 catttctgctcacttgccgcgcttcaaatcaaacacaacgcacgcgtctgcggctgattt 928

                                                                       
Query: 414 catctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaacat 473
           ||||||||| ||||||||||||||||| |  ||||| |||| |||||||||||| || | 
Sbjct: 927 catctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaatgaaaac 868

                                                                       
Query: 474 gaagacaactaggggactttccttcagaatacctctgcacgtattaagcaagcttgtgga 533
            ||||||   || ||||||| ||||||||    || ||||  ||||||||||||||| ||
Sbjct: 867 aaagacagtgagaggactttgcttcagaaggtttccgcacacattaagcaagcttgttga 808

                    
Query: 534 cttctcatc 542
           |||||||||
Sbjct: 807 cttctcatc 799
to top
>dbj|AK104814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H04, full
           insert sequence
          Length = 1177

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 153/189 (80%)
 Strand = Plus / Minus

                                                                       
Query: 354 catttttgctcacttgcctcttttcgaatcgaacgccacacaagcatctgcagctgtttt 413
           ||||| |||||||||||| |  ||| |||| ||| | || || || ||||| |||| |||
Sbjct: 926 catttctgctcacttgccgcgcttcaaatcaaacacaacgcacgcgtctgcggctgattt 867

                                                                       
Query: 414 catctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaacat 473
           ||||||||| ||||||||||||||||| |  ||||| |||| |||||||||||| || | 
Sbjct: 866 catctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaatgaaaac 807

                                                                       
Query: 474 gaagacaactaggggactttccttcagaatacctctgcacgtattaagcaagcttgtgga 533
            ||||||   || ||||||| ||||||||    || ||||  ||||||||||||||| ||
Sbjct: 806 aaagacagtgagaggactttgcttcagaaggtttccgcacacattaagcaagcttgttga 747

                    
Query: 534 cttctcatc 542
           |||||||||
Sbjct: 746 cttctcatc 738
to top
>dbj|AK072529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H01, full
           insert sequence
          Length = 1325

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 153/189 (80%)
 Strand = Plus / Minus

                                                                       
Query: 354 catttttgctcacttgcctcttttcgaatcgaacgccacacaagcatctgcagctgtttt 413
           ||||| |||||||||||| |  ||| |||| ||| | || || || ||||| |||| |||
Sbjct: 988 catttctgctcacttgccgcgcttcaaatcaaacacaacgcacgcgtctgcggctgattt 929

                                                                       
Query: 414 catctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaacat 473
           ||||||||| ||||||||||||||||| |  ||||| |||| |||||||||||| || | 
Sbjct: 928 catctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaatgaaaac 869

                                                                       
Query: 474 gaagacaactaggggactttccttcagaatacctctgcacgtattaagcaagcttgtgga 533
            ||||||   || ||||||| ||||||||    || ||||  ||||||||||||||| ||
Sbjct: 868 aaagacagtgagaggactttgcttcagaaggtttccgcacacattaagcaagcttgttga 809

                    
Query: 534 cttctcatc 542
           |||||||||
Sbjct: 808 cttctcatc 800
to top
>gb|AY370763.1| Zea mays phosphatidylinositol synthase (PIS) mRNA, complete cds
          Length = 1164

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/154 (81%)
 Strand = Plus / Minus

                                                                       
Query: 403 gcagctgttttcatctggatgacattgatcacttgtttgagtgcccacccaattagagtt 462
           ||||| ||||||||||||||||| ||| |  |||| || | |||||| |||| |||||| 
Sbjct: 771 gcagcagttttcatctggatgacgttggtggcttgcttcactgcccagccaactagagtg 712

                                                                       
Query: 463 gaaataaacatgaagacaactaggggactttccttcagaatacctctgcacgtattaagc 522
           |||| |||||  |||| ||| | ||||||||  ||||| || ||| ||||   | |||||
Sbjct: 711 gaaacaaacaccaagataacgacgggactttggttcaggatgcctttgcatacactaagc 652

                                             
Query: 523 aagcttgtggacttctcatcagcatagagaaaca 556
           |||||||| |||| |||||||||| |||||||||
Sbjct: 651 aagcttgttgactcctcatcagcaaagagaaaca 618
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 417      ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaa 470
                |||||||| ||||||||||||||| | |||||| |||| |||||||||||||||
Sbjct: 16786229 ctggatgatattgatcacttgttttaatgcccaaccaactagagttgaaataaa 16786282



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 516      attaagcaagcttgtggacttctcatcagca 546
                ||||||||||||||| || ||||||||||||
Sbjct: 16786413 attaagcaagcttgtcgatttctcatcagca 16786443
to top
>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0025G03
          Length = 139560

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 417   ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaa 470
             |||||||| ||||||||||||||| | |||||| |||| |||||||||||||||
Sbjct: 16387 ctggatgatattgatcacttgttttaatgcccaaccaactagagttgaaataaa 16440



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 516   attaagcaagcttgtggacttctcatcagca 546
             ||||||||||||||| || ||||||||||||
Sbjct: 16571 attaagcaagcttgtcgatttctcatcagca 16601
to top
>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664F03
          Length = 184242

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                    
Query: 417    ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaataaa 470
              |||||||| ||||||||||||||| | |||||| |||| |||||||||||||||
Sbjct: 137716 ctggatgatattgatcacttgttttaatgcccaaccaactagagttgaaataaa 137769



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 516    attaagcaagcttgtggacttctcatcagca 546
              ||||||||||||||| || ||||||||||||
Sbjct: 137900 attaagcaagcttgtcgatttctcatcagca 137930
to top
>gb|AY112631.1| Zea mays CL19015_1 mRNA sequence
          Length = 561

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 391 acacaagcatctgcagctgttttcatctggatgacattgatcacttgtttgagtgcccac 450
           ||||| ||||| ||||| ||||||||||||||||||||| | |||||||| | |||||| 
Sbjct: 341 acacatgcatccgcagcagttttcatctggatgacattggtgacttgtttcactgcccag 400

               
Query: 451 ccaa 454
           ||||
Sbjct: 401 ccaa 404
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                  
Query: 417     ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaat 467
               |||||| ||||||||||||||||| |  ||||| |||| ||||||||||||
Sbjct: 1231789 ctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaat 1231839



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 516     attaagcaagcttgtggacttctcatc 542
               ||||||||||||||| |||||||||||
Sbjct: 1231974 attaagcaagcttgttgacttctcatc 1232000



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 407      ctgttttcatctggatgaca 426
                ||||||||||||||||||||
Sbjct: 14028109 ctgttttcatctggatgaca 14028090
to top
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 417   ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaat 467
             |||||| ||||||||||||||||| |  ||||| |||| ||||||||||||
Sbjct: 62880 ctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaat 62930



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 516   attaagcaagcttgtggacttctcatc 542
             ||||||||||||||| |||||||||||
Sbjct: 63065 attaagcaagcttgttgacttctcatc 63091
to top
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0018H03, complete sequence
          Length = 94450

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 417  ctggatgacattgatcacttgtttgagtgcccacccaattagagttgaaat 467
            |||||| ||||||||||||||||| |  ||||| |||| ||||||||||||
Sbjct: 5818 ctggataacattgatcacttgtttcaacgcccaaccaactagagttgaaat 5868



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 516  attaagcaagcttgtggacttctcatc 542
            ||||||||||||||| |||||||||||
Sbjct: 6003 attaagcaagcttgttgacttctcatc 6029
to top
>gb|AY112475.1| Zea mays CL165_1 mRNA sequence
          Length = 1339

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 110/138 (79%)
 Strand = Plus / Minus

                                                                       
Query: 403 gcagctgttttcatctggatgacattgatcacttgtttgagtgcccacccaattagagtt 462
           ||||| ||||||||||||||||| ||| |  |||| || | |||||| |||| |||||| 
Sbjct: 874 gcagcagttttcatctggatgacgttggtggcttgcttcactgcccagccaactagagtg 815

                                                                       
Query: 463 gaaataaacatgaagacaactaggggactttccttcagaatacctctgcacgtattaagc 522
           |||| |||||  |||| ||| | ||||||||  ||||| || ||| ||||   | |||||
Sbjct: 814 gaaacaaacaccaagataacgacgggactttggttcaggatgcctttgcatacactaagc 755

                             
Query: 523 aagcttgtggacttctca 540
           |||||||| |||| ||||
Sbjct: 754 aagcttgttgactcctca 737
to top
>ref|NM_120018.2| Arabidopsis thaliana unknown protein AT4G38570 mRNA, complete cds
          Length = 1507

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 391 acacaagcatctgcagctgttttcatctggatgacattgat 431
           |||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 908 acacaaacatctgcagccgttttcatctgaatcacattgat 868
to top
>gb|AF521301.1| Brassica napus phosphatidylinositol synthase mRNA, complete cds
          Length = 684

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 398 catctgcagctgttttcatctggatgacattga 430
           |||||||||||||||||||||| |||| |||||
Sbjct: 643 catctgcagctgttttcatctgaatgatattga 611
to top
>emb|BX826559.1|CNS0A40I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZA12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1060

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 391 acacaagcatctgcagctgttttcatctggatgacattgat 431
           |||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 931 acacaaacatctgcagccgttttcatctgaatcacattgat 891
to top
>emb|BX827703.1|CNS0A2ES Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH12ZA03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1383

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 391  acacaagcatctgcagctgttttcatctggatgacattgat 431
            |||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 1271 acacaaacatctgcagccgttttcatctgaatcacattgat 1231
to top
>emb|BX827396.1|CNS0A2GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZB02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1000

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 391 acacaagcatctgcagctgttttcatctggatgacattgat 431
           |||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 822 acacaaacatctgcagccgttttcatctgaatcacattgat 782
to top
>gb|AY086801.1| Arabidopsis thaliana clone 27810 mRNA, complete sequence
          Length = 1012

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 391 acacaagcatctgcagctgttttcatctggatgacattgat 431
           |||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 852 acacaaacatctgcagccgttttcatctgaatcacattgat 812
to top
>gb|BT002432.1| Arabidopsis thaliana putative phosphatidylinositol synthase
           (At4g38570) mRNA, complete cds
          Length = 1067

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 391 acacaagcatctgcagctgttttcatctggatgacattgat 431
           |||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 907 acacaaacatctgcagccgttttcatctgaatcacattgat 867
to top
>gb|AC073203.9| Homo sapiens BAC clone RP11-313M4 from 7, complete sequence
          Length = 150227

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 192   ttctttccacatgctgcttttcc 214
             |||||||||||||||||||||||
Sbjct: 30476 ttctttccacatgctgcttttcc 30498
to top
>gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, complete sequence
          Length = 166861

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 192    ttctttccacatgctgcttttcc 214
              |||||||||||||||||||||||
Sbjct: 144527 ttctttccacatgctgcttttcc 144505
to top
>ref|NM_105470.1| Arabidopsis thaliana ATPIS1; CDP-diacylglycerol-inositol
           3-phosphatidyltransferase AT1G68000 (ATPIS1) mRNA,
           complete cds
          Length = 1001

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 acacaagcatctgcagctgttttcatctggatgacatt 428
           |||||| | |||||||| ||||||||||| ||||||||
Sbjct: 848 acacaaacgtctgcagcagttttcatctgaatgacatt 811
to top
>gb|AY140047.1| Arabidopsis thaliana phosphatidylinositol synthase PIS1 (At1g68000)
           mRNA, complete cds
          Length = 990

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 acacaagcatctgcagctgttttcatctggatgacatt 428
           |||||| | |||||||| ||||||||||| ||||||||
Sbjct: 843 acacaaacgtctgcagcagttttcatctgaatgacatt 806
to top
>emb|BX818735.1|CNS0AE8H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZG03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 953

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 acacaagcatctgcagctgttttcatctggatgacatt 428
           |||||| | |||||||| ||||||||||| ||||||||
Sbjct: 824 acacaaacgtctgcagcagttttcatctgaatgacatt 787
to top
>emb|BX841900.1|CNS09Y4X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL17ZE10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 889

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 acacaagcatctgcagctgttttcatctggatgacatt 428
           |||||| | |||||||| ||||||||||| ||||||||
Sbjct: 806 acacaaacgtctgcagcagttttcatctgaatgacatt 769
to top
>gb|AY087327.1| Arabidopsis thaliana clone 34210 mRNA, complete sequence
          Length = 1000

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 acacaagcatctgcagctgttttcatctggatgacatt 428
           |||||| | |||||||| ||||||||||| ||||||||
Sbjct: 848 acacaaacgtctgcagcagttttcatctgaatgacatt 811
to top
>emb|AJ000539.1|ATPIS1 Arabidopsis thaliana mRNA for phosphatidylinositol synthase
          Length = 955

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 acacaagcatctgcagctgttttcatctggatgacatt 428
           |||||| | |||||||| ||||||||||| ||||||||
Sbjct: 788 acacaaacgtctgcagcagttttcatctgaatgacatt 751
to top
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 158     tttttgttaagaagcagttctcccttttct 187
               ||||| |||||||| |||||||||||||||
Sbjct: 1350403 ttttttttaagaagtagttctcccttttct 1350374
to top
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 391    acacaagcatctgcagctgttttcatctg 419
              |||||| |||||||||| |||||||||||
Sbjct: 140399 acacaaacatctgcagccgttttcatctg 140427
to top
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
             IV, complete sequence
          Length = 107740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 391   acacaagcatctgcagctgttttcatctg 419
             |||||| |||||||||| |||||||||||
Sbjct: 25128 acacaaacatctgcagccgttttcatctg 25100
to top
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20M13 (ESSA project)
          Length = 91938

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 391   acacaagcatctgcagctgttttcatctg 419
             |||||| |||||||||| |||||||||||
Sbjct: 41340 acacaaacatctgcagccgttttcatctg 41368
to top
>emb|CR712342.2|CNS0GCLE Tetraodon nigroviridis full-length cDNA
          Length = 874

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 450 gaagcagttctcccttttct 469
to top
>emb|CR721882.2|CNS0GJY8 Tetraodon nigroviridis full-length cDNA
          Length = 873

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 456 gaagcagttctcccttttct 475
to top
>emb|CR721156.2|CNS0GJE2 Tetraodon nigroviridis full-length cDNA
          Length = 872

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 455 gaagcagttctcccttttct 474
to top
>emb|CR719979.2|CNS0GIHD Tetraodon nigroviridis full-length cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 453 gaagcagttctcccttttct 472
to top
>emb|CR719908.2|CNS0GIFE Tetraodon nigroviridis full-length cDNA
          Length = 716

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 461 gaagcagttctcccttttct 480
to top
>emb|CR718663.2|CNS0GHGT Tetraodon nigroviridis full-length cDNA
          Length = 875

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 456 gaagcagttctcccttttct 475
to top
>emb|CR718475.2|CNS0GHBL Tetraodon nigroviridis full-length cDNA
          Length = 873

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 456 gaagcagttctcccttttct 475
to top
>emb|CR713666.2|CNS0GDM6 Tetraodon nigroviridis full-length cDNA
          Length = 505

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 87  gaagcagttctcccttttct 106
to top
>emb|CR703790.2|CNS0G5ZU Tetraodon nigroviridis full-length cDNA
          Length = 856

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 441 gaagcagttctcccttttct 460
to top
>emb|CR700941.2|CNS0G3SP Tetraodon nigroviridis full-length cDNA
          Length = 869

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 457 gaagcagttctcccttttct 476
to top
>emb|CR694812.2|CNS0FZ2G Tetraodon nigroviridis full-length cDNA
          Length = 781

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 455 gaagcagttctcccttttct 474
to top
>emb|CR694333.2|CNS0FYP5 Tetraodon nigroviridis full-length cDNA
          Length = 871

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 453 gaagcagttctcccttttct 472
to top
>emb|CR692283.2|CNS0FX47 Tetraodon nigroviridis full-length cDNA
          Length = 869

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 450 gaagcagttctcccttttct 469
to top
>emb|CR688183.2|CNS0FTYB Tetraodon nigroviridis full-length cDNA
          Length = 863

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 445 gaagcagttctcccttttct 464
to top
>emb|CR686176.2|CNS0FSEK Tetraodon nigroviridis full-length cDNA
          Length = 848

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 433 gaagcagttctcccttttct 452
to top
>emb|CR685282.2|CNS0FRPQ Tetraodon nigroviridis full-length cDNA
          Length = 879

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 458 gaagcagttctcccttttct 477
to top
>emb|CR676633.2|CNS0FL1X Tetraodon nigroviridis full-length cDNA
          Length = 874

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gaagcagttctcccttttct 187
           ||||||||||||||||||||
Sbjct: 456 gaagcagttctcccttttct 475
to top
>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    acggtatgtttttcttggatatgc 322
              ||||| ||||||||||||||||||
Sbjct: 118376 acggtgtgtttttcttggatatgc 118353
to top
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence
          Length = 125121

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    acggtatgtttttcttggatatgc 322
              ||||| ||||||||||||||||||
Sbjct: 107346 acggtgtgtttttcttggatatgc 107323
to top
>gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete sequence
          Length = 131213

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 299  acggtatgtttttcttggatatgc 322
            ||||| ||||||||||||||||||
Sbjct: 6281 acggtgtgtttttcttggatatgc 6258
to top
>ref|NM_001030530.1| Xenopus tropicalis pex11a protein (pex11a), mRNA
          Length = 2365

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 188  agttttctttccacatgctgcttt 211
            |||||| |||||||||||||||||
Sbjct: 1165 agttttttttccacatgctgcttt 1188
to top
>gb|BC090557.1| Xenopus tropicalis pex11a protein, mRNA (cDNA clone MGC:108178
            IMAGE:7007253), complete cds
          Length = 2365

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 188  agttttctttccacatgctgcttt 211
            |||||| |||||||||||||||||
Sbjct: 1165 agttttttttccacatgctgcttt 1188
to top
>emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chromosome 1q31.1-31.3
              Contains STSs and GSSs, complete sequence
          Length = 172747

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    atgttaagatacatcaagga 264
              ||||||||||||||||||||
Sbjct: 122189 atgttaagatacatcaagga 122170
to top
>emb|AL137122.8| Human DNA sequence from clone RP1-119J15 on chromosome 6, complete
             sequence
          Length = 58484

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   gaagcagttctcccttttct 187
             ||||||||||||||||||||
Sbjct: 44903 gaagcagttctcccttttct 44922
to top
>emb|AL121837.33|HSJ988J12 Human DNA sequence from clone RP5-988J12 on chromosome 6q16.1-16.3
             Contains the 5' end of the MAP3K7 gene for
             mitogen-activated protein kinase kinase kinase 7 (TGF-beta
             activated kinase 1, TAK1) and two CpG islands, complete
             sequence
          Length = 86398

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tgaaataaacatgaagacaa 481
             ||||||||||||||||||||
Sbjct: 38791 tgaaataaacatgaagacaa 38810
to top
>gb|AC161939.4| Mus musculus 10 BAC RP24-364P6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162031

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    tctcccttttctagttttct 195
              ||||||||||||||||||||
Sbjct: 118608 tctcccttttctagttttct 118589
to top
>gb|AC091972.2| Homo sapiens chromosome 5 clone RP11-511M9, complete sequence
          Length = 143880

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   atcaaggagctaccatatgt 276
             ||||||||||||||||||||
Sbjct: 95522 atcaaggagctaccatatgt 95541
to top
>gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 210970

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   tctcccttttctagttttct 195
             ||||||||||||||||||||
Sbjct: 35676 tctcccttttctagttttct 35695
to top
>gb|AC103817.6| Homo sapiens chromosome 8, clone CTD-3083F21, complete sequence
          Length = 203148

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 457   agagttgaaataaacatgaagacaacta 484
             |||||| || ||||||||||||||||||
Sbjct: 61859 agagttcaattaaacatgaagacaacta 61832
to top
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B05
          Length = 117057

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   ctgttttcatctggatgaca 426
             ||||||||||||||||||||
Sbjct: 97747 ctgttttcatctggatgaca 97728
to top
>dbj|AP004136.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1287_H05
          Length = 97812

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  ctgttttcatctggatgaca 426
            ||||||||||||||||||||
Sbjct: 9619 ctgttttcatctggatgaca 9600
to top
>gb|AC117584.11| Mus musculus chromosome 3, clone RP23-151D16, complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    ccttttctagttttctttcc 199
              ||||||||||||||||||||
Sbjct: 100116 ccttttctagttttctttcc 100135
to top
>emb|AL356806.4|CNS05TDO Human chromosome 14 DNA sequence BAC C-2174H20 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 98638

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   tgaaataaacatgaagacaa 481
             ||||||||||||||||||||
Sbjct: 90243 tgaaataaacatgaagacaa 90224
to top
>emb|AL671741.9| Mouse DNA sequence from clone RP23-336M6 on chromosome 3, complete
              sequence
          Length = 179909

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    ccttttctagttttctttcc 199
              ||||||||||||||||||||
Sbjct: 105833 ccttttctagttttctttcc 105814
to top
>emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chromosome X, complete
              sequence
          Length = 230701

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    tctagttttctttccacatg 204
              ||||||||||||||||||||
Sbjct: 206347 tctagttttctttccacatg 206328
to top
>emb|AL161415.2|CNS01RH5 Human chromosome 14 DNA sequence BAC R-139D16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161443

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   tcccttttctagttttcttt 197
             ||||||||||||||||||||
Sbjct: 60870 tcccttttctagttttcttt 60889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,510,500
Number of Sequences: 3902068
Number of extensions: 5510500
Number of successful extensions: 100751
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 100544
Number of HSP's gapped (non-prelim): 199
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top