| Clone Name | rbags15a14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | JI23_HORVU (P32024) 23 kDa jasmonate-induced protein | 206 | 3e-53 | 2 | JIPH_ATRCA (P42764) Jasmonate-induced protein homolog | 41 | 0.002 | 3 | IL4RA_HORSE (Q6WG24) Interleukin-4 receptor alpha chain precurso... | 31 | 2.5 | 4 | YP158_YEAST (Q99299) Protein YPL158C | 31 | 3.3 | 5 | CARA_ACIAD (Q6F8M7) Carbamoyl-phosphate synthase small chain (EC... | 30 | 5.7 |
|---|
>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein| Length = 210 Score = 206 bits (525), Expect = 3e-53 Identities = 93/130 (71%), Positives = 107/130 (82%), Gaps = 2/130 (1%) Frame = -3 Query: 609 YKNWIGSIFDTPYPSDIQNGQWGAFLHVKPRAAAKGSTAAVVYRSRIPXXXXSCDWLFTW 430 Y +W G I+DTPYPSDIQNGQWGAFLHV P AA GS AVVYRS+IP SCDWLF+W Sbjct: 81 YNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSW 140 Query: 429 SVPFIGNNGVYTEIREQGHFPK--HWDYIYNVRLANSNLHSTDSNYGYVSRANIGEGTTM 256 +VP+IG NGVYTEIRE+GH+P WDYIYNV+L NS++ S DSNYGYVS+A+IGEGTTM Sbjct: 141 TVPYIGGNGVYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTM 200 Query: 255 NARAVFQLPY 226 NAR VF+ PY Sbjct: 201 NARGVFEFPY 210
>JIPH_ATRCA (P42764) Jasmonate-induced protein homolog| Length = 185 Score = 41.2 bits (95), Expect = 0.002 Identities = 35/108 (32%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Frame = -3 Query: 603 NWIGSIFDTPYPSDIQNGQWGAFLHVKPRAAAKGSTAAVVYRSRIPXXXXSCDWLFTWSV 424 NW GS+ T YP I Q F+H A GS AVVY C WL W Sbjct: 56 NWSGSVVGTGYPKSIPTKQSRQFIH--QGDAKDGSQGAVVYYGS-NANGEPCGWLLAWCA 112 Query: 423 PF----IGNNGVYTEIREQGHFPK-HWDYI---YNVRLANSNLHSTDS 304 P N VY + Q F WD I +V A +N D+ Sbjct: 113 PTNVTPTKPNRVYVDCGAQSKFDTISWDTIKAKLDVGPATTNFTDVDT 160
>IL4RA_HORSE (Q6WG24) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 809 Score = 31.2 bits (69), Expect = 2.5 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = -3 Query: 531 HVKPRAAAKGSTAAVVYRSRIPXXXXSCDWLFTWSVPFIGNNGVYTEIREQGHFPKHWD- 355 HVKPRA + A+ + WL TWS P+ N +++E+ + K D Sbjct: 120 HVKPRAPQNLTVHAISHT-----------WLLTWSNPYPLKNHLWSELTYLVNISKEDDP 168 Query: 354 ---YIYNVRLANSNLHSTDS 304 IYNV + L T S Sbjct: 169 TDFKIYNVTYMDPTLRVTAS 188
>YP158_YEAST (Q99299) Protein YPL158C| Length = 758 Score = 30.8 bits (68), Expect = 3.3 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = -3 Query: 420 FIGNNGVYTEIREQGHFPKHWDYIYNVRLANSNLHSTDSNYGYVSRANIGEGTTMNARAV 241 F NGV + E G+ DY +N+N +S S+ GY S ANI + TT + R V Sbjct: 49 FAAENGVSRD--EDGNSQTLSDY---TSTSNTNTNSGYSSNGYYSFANISDNTTSSPRIV 103
>CARA_ACIAD (Q6F8M7) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 379 Score = 30.0 bits (66), Expect = 5.7 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -3 Query: 441 LFTWSVPFIGNNGVYTEIREQGHFPKHWD---YIYNVRLANSNLHSTDSNYGYVSRANI 274 L T + P IGN G E E G K W I ++ L +SN S S Y+ + N+ Sbjct: 52 LVTLTYPHIGNTGCNEEDTESGRIHKVWANGLIIRDLPLLHSNFRSEQSLAEYLIQHNV 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,423,792 Number of Sequences: 219361 Number of extensions: 1996380 Number of successful extensions: 4694 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4573 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4693 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)