| Clone Name | rbags14l14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds Length = 819 Score = 995 bits (502), Expect = 0.0 Identities = 604/635 (95%), Gaps = 6/635 (0%) Strand = Plus / Minus Query: 27 aatacatgaacaagagagccagccaatatgcaaatcaagaaggatcttcaagcagtttca 86 |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 657 aatacatgaacaagag----ggccaatatgcaaatcaagatggatcttcaagcagtttcg 602 Query: 87 gcaacggggtactcgtataccacatccttgccacaaagcctgcggtacactgaagtgaag 146 ||||| || ||||| || |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 601 gcaaccggatactcatacaccacatctttgccacaaagcctgcggtacactgcagtgaag 542 Query: 147 gtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatt 206 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 541 gtatccaacttgtactctgtgttgttgcgttccattgggtccaagaagatcttaatgatc 482 Query: 207 ttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaaca 266 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 481 ttcgagccatctagacgatatctgacacgtttccccacaatctcagctgggtacacaaca 422 Query: 267 tcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagca 326 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 tcctccaaaaggccatcatgaacagcagtcaaagttctggtacgagggcgaacaacagca 362 Query: 327 gaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccg 386 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 361 gaacccttcttgggtggcctcacaatccgccttgtagcaacaataacaacgtccttgccg 302 Query: 387 ctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaaggacttgcgg 446 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 301 ctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagttcttgcgg 242 Query: 447 agcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatccatctggaag 506 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agcctatacggcacgtggatgaccacggccttcctgttccctgcaacatccatctggaag 182 Query: 507 gcggcgttgatgtagaggtcttttgacgtcgctcttgagctcctggttgccattctccag 566 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 181 gcggcgttgatgtagaggtc-tttaacgtcgctcttgagctcctggttgccattctccag 123 Query: 567 gtcgaagaaagcctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtcctt 626 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122 gtcgaagaaagcctgcgcgacggtgtcctcgaactcggagggctcgaggcccttgtcctt 63 Query: 627 ctggatcttctt-ctcgccgtgtacatggtgcttt 660 |||||||||||| |||||||||||||||||||||| Sbjct: 62 ctggatcttcttcctcgccgtgtacatggtgcttt 28
>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds Length = 600 Score = 529 bits (267), Expect = e-147 Identities = 460/523 (87%), Gaps = 1/523 (0%) Strand = Plus / Minus Query: 117 ccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgt 176 ||||||||||||||||| |||| || |||||| |||| ||||||||| ||||||||||| Sbjct: 553 ccacaaagcctgcggtagactgcagagaaggtctccagcttgtactcagtgttgttgcgc 494 Query: 177 tcctttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgt 236 ||||| ||||||||| |||||||||||| || | ||||| | ||| || |||||||| Sbjct: 493 tccttcgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacacgc 434 Query: 237 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 296 ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||| Sbjct: 433 ttccccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtc 374 Query: 297 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 356 | || || || |||||||| |||||||||||| || |||||||||||||| |||| Sbjct: 373 agggtcctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacgatcctt 314 Query: 357 cttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagc 416 ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 313 cttgttgcaacaaagacaacatccttgccgctaaacttcttctcgagctccctgacgagc 254 Query: 417 ctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggcc 476 ||||| |||||||||||||||| |||||| || | ||| || || ||||| ||||||||| Sbjct: 253 ctgacatggatcttcctgaagggcttgcgcagacggtatggcacatggatcaccacggcc 194 Query: 477 ttcctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtcttttgacgtc 536 ||||||||||| ||||||||||||||| || | ||||||||| ||||| |||| ||| Sbjct: 193 ttcctgttcccaacaacatccatctggattgcagtgttgatgtacaggtc-cttgaggtc 135 Query: 537 gctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctc 596 ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| Sbjct: 134 gctcttgagctcctggttgccattctccaggtcaaagaaagcctgcgcaacggtgtcctc 75 Query: 597 gaactcggagggctcgaggcccttgtccttctggatcttcttc 639 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 74 gaactcggagggctcgacgcccttgtccttctggatcttcttc 32
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene) Length = 852 Score = 509 bits (257), Expect = e-141 Identities = 457/520 (87%), Gaps = 4/520 (0%) Strand = Plus / Minus Query: 120 caaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcc 179 |||||||||||||| |||| || |||||| |||| |||||| || ||||||||||| ||| Sbjct: 596 caaagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcc 537 Query: 180 tttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttc 239 |||||||||||| |||||||||||| || | ||||| | ||| || ||||| || ||| Sbjct: 536 tttgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttc 477 Query: 240 cccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaa 299 |||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 476 cccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtcagg 417 Query: 300 gttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgcctt 359 ||||| || |||||||| |||||||||||| || ||||||||||||||||||| ||| Sbjct: 416 gttctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacaatccttctt 357 Query: 360 gttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 419 |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct: 356 gttgcaacaaagacaacatccttgccgct-aactc--tctcgagctccctgacgagcctg 300 Query: 420 acgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttc 479 || |||||||||||||||| ||||||||| | |||||| || ||||| |||||||||||| Sbjct: 299 acatggatcttcctgaagggcttgcggagacggtacggcacatggatcaccacggccttc 240 Query: 480 ctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtcttttgacgtcgct 539 |||||||| ||||||||||||||| || | ||||||||| ||||| || || |||||| Sbjct: 239 ctgttcccaacaacatccatctggatcgcagtgttgatgtacaggtcctt-gaggtcgct 181 Query: 540 cttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcgaa 599 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 180 cttgagctcctggttgccattctccaggtcaaagaaagcctgcgcgacggtgtcctcgaa 121 Query: 600 ctcggagggctcgaggcccttgtccttctggatcttcttc 639 ||| |||||||||| ||||||||||||||||||||||||| Sbjct: 120 ctccgagggctcgacgcccttgtccttctggatcttcttc 81
>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence Length = 907 Score = 486 bits (245), Expect = e-134 Identities = 475/549 (86%), Gaps = 2/549 (0%) Strand = Plus / Minus Query: 105 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 164 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 653 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 594 Query: 165 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 224 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 593 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 534 Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 284 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 533 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 474 Query: 285 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 344 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 473 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 414 Query: 345 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 404 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 413 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 354 Query: 405 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 464 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 353 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 294 Query: 465 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 524 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 293 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 234 Query: 525 tcttttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgc 584 || |||| ||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 233 tc-cttgaggtcgctcttgagctcctggttcccgttctccagatcaaagaaagcctgggc 175 Query: 585 gacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttctt-ctcgc 643 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 174 aacggagtcctcgaactcggagggctcaaggcccttctccttctggatcttcttcctcgc 115 Query: 644 cgtgtacat 652 |||||||| Sbjct: 114 ggtgtacat 106
>gb|AY103554.1| Zea mays PCO154340 mRNA sequence Length = 1075 Score = 478 bits (241), Expect = e-131 Identities = 474/549 (86%), Gaps = 2/549 (0%) Strand = Plus / Minus Query: 105 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 164 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 692 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 633 Query: 165 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 224 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 632 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 573 Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 284 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 572 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 513 Query: 285 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 344 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 512 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 453 Query: 345 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 404 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 452 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 393 Query: 405 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 464 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 392 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 333 Query: 465 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 524 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 332 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 273 Query: 525 tcttttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgc 584 || |||| ||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 272 tc-cttgaggtcgctcttgagctcctggttcccgttctccagatcaaagaaagcctgggc 214 Query: 585 gacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttctt-ctcgc 643 ||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 213 aacggagtcctcaaactcggagggctcaaggcccttctccttctggatcttcttcctcgc 154 Query: 644 cgtgtacat 652 |||||||| Sbjct: 153 ggtgtacat 145
>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full insert sequence Length = 966 Score = 476 bits (240), Expect = e-131 Identities = 500/584 (85%), Gaps = 2/584 (0%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 655 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 596 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 595 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 536 Query: 190 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 249 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 535 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 476 Query: 250 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 309 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 475 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 416 Query: 310 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 369 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 415 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 356 Query: 370 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 429 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 355 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 296 Query: 430 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 489 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 295 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 236 Query: 490 caacatccatctggaaggcggcgttgatgtagaggtcttttgacgtcgctcttgagctcc 549 ||| ||||||||||| || ||||||||| ||||| |||| ||||||||||||||| Sbjct: 235 caatatccatctggactgcattgttgatgtacaggtc-cttgagctcgctcttgagctcc 177 Query: 550 tggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcgaactcggagggc 609 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 176 tggttgccattctcgaggtcaaagaaagcctgcgcgacggagtcctcgaactcggagggc 117 Query: 610 tcgaggcccttgtccttctggatcttctt-ctcgccgtgtacat 652 ||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 116 tcgaggcccttctccttctggatcttcttcctcgcggtgtacat 73
>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full insert sequence Length = 830 Score = 476 bits (240), Expect = e-131 Identities = 500/584 (85%), Gaps = 2/584 (0%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 654 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 595 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 594 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 535 Query: 190 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 249 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 534 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 475 Query: 250 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 309 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 474 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 415 Query: 310 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 369 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 414 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 355 Query: 370 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 429 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 354 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 295 Query: 430 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 489 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 294 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 235 Query: 490 caacatccatctggaaggcggcgttgatgtagaggtcttttgacgtcgctcttgagctcc 549 ||| ||||||||||| || ||||||||| ||||| |||| ||||||||||||||| Sbjct: 234 caatatccatctggactgcattgttgatgtacaggtc-cttgagctcgctcttgagctcc 176 Query: 550 tggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcgaactcggagggc 609 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 175 tggttgccattctcgaggtcaaagaaagcctgcgcgacggagtcctcgaactcggagggc 116 Query: 610 tcgaggcccttgtccttctggatcttctt-ctcgccgtgtacat 652 ||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 115 tcgaggcccttctccttctggatcttcttcctcgcggtgtacat 72
>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence Length = 840 Score = 299 bits (151), Expect = 6e-78 Identities = 440/535 (82%), Gaps = 1/535 (0%) Strand = Plus / Minus Query: 105 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 164 |||||||| || ||||| ||||||||||| || | | || ||| |||| |||||| || Sbjct: 616 accacatctttcccacacagcctgcggtagaccgcaatgcagggctccagcttgtattca 557 Query: 165 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 224 | |||||| | ||||||||||||||||| |||||||| || || || ||||| | ||| Sbjct: 556 gagttgttcctctcctttgggtccaagaaaatcttgataatcttggacccatccacacgg 497 Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 284 ||| ||||| | |||||| ||||||||| |||||| |||||||||||||||| ||||| Sbjct: 496 tatgtgacatgcttcccctcaatctcagttgggtagacaacatcctccaaaatgccatcg 437 Query: 285 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 344 ||||||||||||| ||| || || | |||||| | |||||| || || || |||||| | Sbjct: 436 tgaacagcagtcacagtcctggtcctagggcgcagaacagctgaccccttcgtgggtgcc 377 Query: 345 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 404 |||||||||| |||||| |||||||| || || ||||| ||| |||| |||||||| ||| Sbjct: 376 ctcacaatcccccttgtagcaacaattaccacatccttcccgatgaatttcttctccagc 317 Query: 405 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 464 ||||||| ||| ||||| ||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 316 tccctgaagagtctgacatggatcttcctgaagcccttgcgcagacggtatgggacgtgg 257 Query: 465 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 524 ||||| | |||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 256 atgacatcacccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 197 Query: 525 tcttttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgc 584 || |||| ||||||||||| ||||||||| || |||||||| || ||||||||||| || Sbjct: 196 tc-cttgaggtcgctcttgacctcctggttcccgttctccagatcaaagaaagcctgggc 138 Query: 585 gacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttcttc 639 ||||| ||||||||| ||||||||| || ||||| || ||||||||||||||| Sbjct: 137 atcggagccctcgaacttggagggctcaagccccttctcgttctggatcttcttc 83
>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full insert sequence Length = 811 Score = 293 bits (148), Expect = 4e-76 Identities = 246/276 (89%), Gaps = 2/276 (0%) Strand = Plus / Minus Query: 378 tccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaag 437 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| Sbjct: 357 tccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaat 298 Query: 438 gacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcc 497 | |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| |||| Sbjct: 297 gccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcc 238 Query: 498 atctggaaggcggcgttgatgtagaggtcttttgacgtcgctcttgagctcctggttgcc 557 ||||||| || ||||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 237 atctggactgcattgttgatgtacaggtcctt-gagctcgctcttgagctcctggttgcc 179 Query: 558 attctccaggtcgaagaaagcctgcgcgacggagtcctcgaactcggagggctcgaggcc 617 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 attctcgaggtcaaagaaagcctgcgcgacggagtcctcgaactcggagggctcgaggcc 119 Query: 618 cttgtccttctggatcttctt-ctcgccgtgtacat 652 ||| ||||||||||||||||| ||||| |||||||| Sbjct: 118 cttctccttctggatcttcttcctcgcggtgtacat 83 Score = 113 bits (57), Expect = 8e-22 Identities = 168/205 (81%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 577 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 518 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 517 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 458 Query: 190 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 249 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 457 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 398 Query: 250 cagctgggtaaacaacatcctccaa 274 |||||||||| || ||||| ||||| Sbjct: 397 cagctgggtagactacatcttccaa 373
>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7) mRNA, complete cds Length = 919 Score = 153 bits (77), Expect = 9e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 600 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 541 Query: 215 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 274 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 540 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 481 Query: 275 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 334 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 480 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 421 Query: 335 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 394 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 420 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 361 Query: 395 cttctcgagctccctgacgagcctgacgtggatcttc 431 |||||| || ||||| || ||||| || ||||||||| Sbjct: 360 cttctcaagttccctaacaagcctcacatggatcttc 324 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 538 ctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcg 597 ||||| |||||||| || |||||||| ||||| || || ||||| || || | |||||| Sbjct: 218 ctcttcagctcctgattcccattctcaaggtcaaaaaatgcctgagcaacagtgtcctca 159 Query: 598 aactcggagggctcgaggcccttgtccttctggatcttc 636 ||||| | ||||| || ||||||||||||||||||||| Sbjct: 158 aactcagttggctccagacccttgtccttctggatcttc 120
>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full insert sequence Length = 910 Score = 153 bits (77), Expect = 9e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 215 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 274 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 275 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 334 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 335 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 394 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 395 cttctcgagctccctgacgagcctgacgtggatcttc 431 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 538 ctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcg 597 ||||| |||||||| || |||||||| ||||| || || ||||| || || | |||||| Sbjct: 229 ctcttcagctcctgattcccattctcaaggtcaaaaaatgcctgagcaacagtgtcctca 170 Query: 598 aactcggagggctcgaggcccttgtccttctggatcttc 636 ||||| | ||||| || ||||||||||||||||||||| Sbjct: 169 aactcagttggctccagacccttgtccttctggatcttc 131
>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full insert sequence Length = 910 Score = 153 bits (77), Expect = 9e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 215 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 274 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 275 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 334 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 335 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 394 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 395 cttctcgagctccctgacgagcctgacgtggatcttc 431 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 538 ctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcg 597 ||||| |||||||| || |||||||| ||||| || || ||||| || || | |||||| Sbjct: 229 ctcttcagctcctgattcccattctcaaggtcaaaaaatgcctgagcaacagtgtcctca 170 Query: 598 aactcggagggctcgaggcccttgtccttctggatcttc 636 ||||| | ||||| || ||||||||||||||||||||| Sbjct: 169 aactcagttggctccagacccttgtccttctggatcttc 131
>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full insert sequence Length = 903 Score = 145 bits (73), Expect = 2e-31 Identities = 226/277 (81%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 215 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 274 | | | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 acccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 275 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 334 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 335 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 394 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 395 cttctcgagctccctgacgagcctgacgtggatcttc 431 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 538 ctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacggagtcctcg 597 ||||| |||||||| || |||||||| ||||| || || ||||| || || | |||||| Sbjct: 229 ctcttcagctcctgattcccattctcaaggtcaaaaaatgcctgagcaacagtgtcctca 170 Query: 598 aactcggagggctcgaggcccttgtccttctggatcttc 636 ||||| | ||||| || ||||||||||||||||||||| Sbjct: 169 aactcagttggctccagacccttgtccttctggatcttc 131
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10366335 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10366276 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10366275 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10366216 Query: 499 tctgg 503 ||||| Sbjct: 10366215 tctgg 10366211 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10367112 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10367053 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10367052 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10366993 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10366992 ttcttgggaggcctcacaatcctccttgttgcaacaat 10366955 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10370579 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10370520 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10370519 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10370460 Query: 499 tctgg 503 ||||| Sbjct: 10370459 tctgg 10370455 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10370177 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 10370118 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 10370117 tcctcgcggtgtacat 10370102 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10365937 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 10365878 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 10365877 tcctcgcggtgtacat 10365862 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10371367 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10371308 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10371307 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10371248 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10371247 ttcttgggaggcctcacaatcctccttgttgcaacaat 10371210 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10371759 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10371700 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10371699 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10371640 Query: 190 agaagatct 198 |||| |||| Sbjct: 10371639 agaaaatct 10371631 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 10370294 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 10370249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 10366054 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 10366009 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10367503 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10367444 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10367443 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10367384 Query: 190 agaagatct 198 |||| |||| Sbjct: 10367383 agaaaatct 10367375
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 22888 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 22829 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 22828 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 22769 Query: 499 tctgg 503 ||||| Sbjct: 22768 tctgg 22764 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 23665 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 23606 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 23605 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 23546 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 23545 ttcttgggaggcctcacaatcctccttgttgcaacaat 23508 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 27132 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 27073 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 27072 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 27013 Query: 499 tctgg 503 ||||| Sbjct: 27012 tctgg 27008 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 26730 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 26671 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 26670 tcctcgcggtgtacat 26655 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 22490 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 22431 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 22430 tcctcgcggtgtacat 22415 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 27920 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 27861 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 27860 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 27801 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 27800 ttcttgggaggcctcacaatcctccttgttgcaacaat 27763 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 28312 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 28253 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 28252 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 28193 Query: 190 agaagatct 198 |||| |||| Sbjct: 28192 agaaaatct 28184 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 26847 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 26802 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 22607 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 22562 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 24056 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 23997 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 23996 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 23937 Query: 190 agaagatct 198 |||| |||| Sbjct: 23936 agaaaatct 23928
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 79801 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 79742 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 79741 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 79682 Query: 499 tctgg 503 ||||| Sbjct: 79681 tctgg 79677 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 80578 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 80519 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 80518 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 80459 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 80458 ttcttgggaggcctcacaatcctccttgttgcaacaat 80421 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 84045 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 83986 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 83985 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 83926 Query: 499 tctgg 503 ||||| Sbjct: 83925 tctgg 83921 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 83643 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 83584 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 83583 tcctcgcggtgtacat 83568 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 79403 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 79344 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 79343 tcctcgcggtgtacat 79328 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 84833 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 84774 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 84773 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 84714 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 84713 ttcttgggaggcctcacaatcctccttgttgcaacaat 84676 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 85225 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 85166 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 85165 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 85106 Query: 190 agaagatct 198 |||| |||| Sbjct: 85105 agaaaatct 85097 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 83760 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 83715 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 79520 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 79475 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 80969 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 80910 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 80909 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 80850 Query: 190 agaagatct 198 |||| |||| Sbjct: 80849 agaaaatct 80841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10364436 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10364377 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10364376 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10364317 Query: 499 tctgg 503 ||||| Sbjct: 10364316 tctgg 10364312 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10365213 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10365154 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10365153 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10365094 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10365093 ttcttgggaggcctcacaatcctccttgttgcaacaat 10365056 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 438 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10368680 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10368621 Query: 439 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 498 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10368620 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10368561 Query: 499 tctgg 503 ||||| Sbjct: 10368560 tctgg 10368556 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10368278 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 10368219 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 10368218 tcctcgcggtgtacat 10368203 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 578 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttct 637 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10364038 cctgcgcgacggagtcctcgaactcggagggctcgaggcccttctccttctggatcttct 10363979 Query: 638 t-ctcgccgtgtacat 652 | ||||| |||||||| Sbjct: 10363978 tcctcgcggtgtacat 10363963 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 272 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10369468 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10369409 Query: 273 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 332 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10369408 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10369349 Query: 333 tttttgggtggcctcacaatccgccttgttgcaacaat 370 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10369348 ttcttgggaggcctcacaatcctccttgttgcaacaat 10369311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10369860 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10369801 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10369800 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10369741 Query: 190 agaagatct 198 |||| |||| Sbjct: 10369740 agaaaatct 10369732 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 10368395 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 10368350 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaagcct 580 ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 10364155 tcgctcttgagctcctggttgccattctcgaggtcaaagaaagcct 10364110 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 70 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 129 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10365604 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10365545 Query: 130 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 189 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10365544 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10365485 Query: 190 agaagatct 198 |||| |||| Sbjct: 10365484 agaaaatct 10365476
>ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 265 catcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacag 324 |||||||||| | ||||||||||||| | ||||||||||||||||||| || ||||| Sbjct: 235 catcctccaagattccatcatgaacagtaatcaaagttcttgtacgaggatgatgaacag 176 Query: 325 cagaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgc 384 | ||||| || ||| | ||||||||||||| |||||||||| ||| || || ||||||| Sbjct: 175 ctgaacccttattgagaggcctcacaatcctccttgttgcatcaaagaccacatccttgc 116 Query: 385 cgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 436 | |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 115 cactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 64
>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds Length = 392 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 68 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 127 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 177 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 118 Query: 128 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 187 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 117 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 58 Query: 188 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 242 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 57 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 3
>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence Length = 393 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 68 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 127 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 178 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 119 Query: 128 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 187 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 118 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 59 Query: 188 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 242 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 58 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 4
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 97.6 bits (49), Expect = 5e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 284 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 15621 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 15680 Query: 285 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 344 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 15681 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 15740 Query: 345 ctcac 349 ||||| Sbjct: 15741 ctcac 15745 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 198 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 14995 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 15038 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 607 ggctcgaggcccttgtccttctggatcttc 636 ||||| || ||||||||||||||||||||| Sbjct: 17053 ggctccagacccttgtccttctggatcttc 17082
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 97.6 bits (49), Expect = 5e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 284 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 119434 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 119493 Query: 285 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 344 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 119494 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 119553 Query: 345 ctcac 349 ||||| Sbjct: 119554 ctcac 119558 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 198 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 118808 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 118851 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 607 ggctcgaggcccttgtccttctggatcttc 636 ||||| || ||||||||||||||||||||| Sbjct: 120866 ggctccagacccttgtccttctggatcttc 120895
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 5e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 284 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 16168264 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 16168323 Query: 285 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 344 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 16168324 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 16168383 Query: 345 ctcac 349 ||||| Sbjct: 16168384 ctcac 16168388 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 198 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 16167638 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 16167681 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 607 ggctcgaggcccttgtccttctggatcttc 636 ||||| || ||||||||||||||||||||| Sbjct: 16169696 ggctccagacccttgtccttctggatcttc 16169725
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 97.6 bits (49), Expect = 5e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 237 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 296 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 13024659 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 13024717 Query: 297 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 356 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 13024718 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 13024777 Query: 357 cttgttgca 365 ||||||||| Sbjct: 13024778 cttgttgca 13024786 Score = 89.7 bits (45), Expect = 1e-14 Identities = 64/69 (92%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 585 gacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttctt-ctcgc 643 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 13025897 gacggagtcctcgaactcggagggctataggcccttctccttctggatcttcttcctcgc 13025956 Query: 644 cgtgtacat 652 |||||||| Sbjct: 13025957 agtgtacat 13025965 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 108 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 167 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 13024255 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 13024314 Query: 168 ttgttgcgttcctttgggtccaagaagatc 197 |||||||| |||||||| |||||||||||| Sbjct: 13024315 ttgttgcgctcctttggatccaagaagatc 13024344 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 436 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 13025424 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 13025481 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaa 576 ||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 13025703 tcgctcttgagctaatggtttccattctcgaggtcaaagaaa 13025744
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 97.6 bits (49), Expect = 5e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 237 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 296 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 134302 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 134360 Query: 297 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 356 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 134361 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 134420 Query: 357 cttgttgca 365 ||||||||| Sbjct: 134421 cttgttgca 134429 Score = 89.7 bits (45), Expect = 1e-14 Identities = 64/69 (92%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 585 gacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttctt-ctcgc 643 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 135540 gacggagtcctcgaactcggagggctataggcccttctccttctggatcttcttcctcgc 135599 Query: 644 cgtgtacat 652 |||||||| Sbjct: 135600 agtgtacat 135608 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 108 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 167 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 133898 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 133957 Query: 168 ttgttgcgttcctttgggtccaagaagatc 197 |||||||| |||||||| |||||||||||| Sbjct: 133958 ttgttgcgctcctttggatccaagaagatc 133987 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 436 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 135067 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 135124 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaa 576 ||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 135346 tcgctcttgagctaatggtttccattctcgaggtcaaagaaa 135387
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 97.6 bits (49), Expect = 5e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 237 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 296 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 1236 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 1294 Query: 297 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 356 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 1295 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 1354 Query: 357 cttgttgca 365 ||||||||| Sbjct: 1355 cttgttgca 1363 Score = 89.7 bits (45), Expect = 1e-14 Identities = 64/69 (92%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 585 gacggagtcctcgaactcggagggctcgaggcccttgtccttctggatcttctt-ctcgc 643 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2474 gacggagtcctcgaactcggagggctataggcccttctccttctggatcttcttcctcgc 2533 Query: 644 cgtgtacat 652 |||||||| Sbjct: 2534 agtgtacat 2542 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 108 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 167 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 832 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 891 Query: 168 ttgttgcgttcctttgggtccaagaagatc 197 |||||||| |||||||| |||||||||||| Sbjct: 892 ttgttgcgctcctttggatccaagaagatc 921 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 436 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 2001 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 2058 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 535 tcgctcttgagctcctggttgccattctccaggtcgaagaaa 576 ||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 2280 tcgctcttgagctaatggtttccattctcgaggtcaaagaaa 2321
>ref|NM_103777.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.1 mRNA, complete cds Length = 842 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 208 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 601 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 548
>ref|NM_179455.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.2 mRNA, complete cds Length = 837 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 208 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 541 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 488
>gb|BT009440.1| Triticum aestivum clone wlmk4.pk0019.f5:fis, full insert mRNA sequence Length = 1907 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 538 ctcttgagctcctggttgccattctccaggtcgaagaaagcc 579 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1636 ctcttgagctcctggttgccattctccaggtcaaagaaagcc 1595
>gb|AY072617.1| Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 576 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 208 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 498 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 445
>gb|AF412048.1|AF412048 Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 814 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 208 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 595 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 542
>gb|AY086866.1| Arabidopsis thaliana clone 28739 mRNA, complete sequence Length = 841 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 208 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 599 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 546 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 327 gaaccttttttgggtggcctcacaatccgccttgttgcaa 366 ||||| || ||||| ||||||||||||| |||||| |||| Sbjct: 427 gaacccttcttgggcggcctcacaatcctccttgtagcaa 388
>gb|DQ228355.1| Solanum tuberosum clone 153A08 ribosomal protein S7-like protein mRNA, complete cds Length = 881 Score = 71.9 bits (36), Expect = 3e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 144 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 203 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 602 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 543 Query: 204 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 263 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 542 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 483 Query: 264 acatcctccaaaagaccatcatgaacag 291 | ||||||||| | |||||||||||| Sbjct: 482 aaatcctccaatatggcatcatgaacag 455
>gb|DQ200382.1| Solanum tuberosum clone 063A09 unknown mRNA Length = 817 Score = 71.9 bits (36), Expect = 3e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 144 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 203 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 589 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 530 Query: 204 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 263 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 529 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 470 Query: 264 acatcctccaaaagaccatcatgaacag 291 | ||||||||| | |||||||||||| Sbjct: 469 aaatcctccaatatggcatcatgaacag 442
>gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BAC F11I4 genomic sequence, complete sequence Length = 80561 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 195 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 2112 cttgtactctgtgttgttcctttcctttgggtccaagaaga 2072
>gb|AC084242.4|AC084242 Arabidopsis thaliana chromosome 1 BAC T24P22 genomic sequence, complete sequence Length = 18062 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 195 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 15801 cttgtactctgtgttgttcctttcctttgggtccaagaaga 15761
>gb|DQ191636.1| Solanum tuberosum 40S ribosomal protein S7-like protein mRNA, complete cds Length = 893 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 144 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 191 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 585 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 538
>ref|XM_784661.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S7 (S8) (LOC584812), mRNA Length = 667 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 380 cttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 431 ||||||||||||||||||||| ||||| | ||| |||||||| ||||||||| Sbjct: 290 cttgccgctgaacttcttctcaagctctcggactagcctgacctggatcttc 239
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 150 tccaacttgtactctgtgttgttgcgttcctttgggtccaagaa 193 |||| ||||||||| |||||||| |||||||||||||||||||| Sbjct: 14984 tccagcttgtactcagtgttgtttcgttcctttgggtccaagaa 14941 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgac 412 ||||||| || ||||||||||| ||||||||||| Sbjct: 14053 ccttgccactaaacttcttctcaagctccctgac 14020 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 213 ccatcaagacgatatctgacacgtttccccacaatctcagc 253 ||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 14772 ccatcaactcgatacctcacacgtttcccaacaatctcagc 14732 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cgttcctttgggtccaagaa 193 |||||||||||||||||||| Sbjct: 43270 cgttcctttgggtccaagaa 43251 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcct 418 ||||||| || |||||||||| ||||||||||| ||||| Sbjct: 24439 ccttgccactaaacttcttcttaagctccctgactagcct 24400
>gb|DQ241830.1| Solanum tuberosum clone 174B09 40S ribosomal protein S7-like protein-like mRNA, complete cds Length = 894 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 144 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 191 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 592 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 545
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatctt 430 |||| |||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 45492 cctttccgctgaatttcttctcgagctccctaacaagcctgacatgaatctt 45441
>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA, partial cds Length = 546 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 160 actctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaa 219 |||| ||||||||||| ||||| || ||||||||||||||| | ||||| || ||||||| Sbjct: 546 actcagtgttgttgcgctccttgggatccaagaagatcttgctaattttggacccatcaa 487
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccct 409 ||||||| ||||||||||||||||||||||| Sbjct: 125704 ccttgccactgaacttcttctcgagctccct 125674 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 546 ctcctggttgccattctccaggtcgaagaaagcctg 581 |||||||||| ||||||||| || ||||||||||| Sbjct: 125444 ctcctggttggtattctccagatcaaagaaagcctg 125409
>gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 271 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 371 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 419 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>gb|AF098519.1|AF098519 Avicennia marina unknown mRNA Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 225 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 271 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 371 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 419 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>ref|XM_716679.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_1700), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 281 atcatgaacagcagtcaaagttcttg 306 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>ref|XM_716558.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_9267), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 281 atcatgaacagcagtcaaagttcttg 306 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 379 ccttgccgctgaacttcttctcgagctccct 409 ||||||| |||||||||||||| |||||||| Sbjct: 142888 ccttgccactgaacttcttctccagctccct 142858
>emb|X94942.1|FRRPS7U17 F.rubripes rpS7 and snoRNA U17 genes Length = 4298 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 375 acgtccttgccgctgaacttcttctcgagctccct 409 |||| ||| ||||||||||||||||| |||||||| Sbjct: 2003 acgtgctttccgctgaacttcttctccagctccct 1969
>ref|NM_121618.2| Arabidopsis thaliana structural constituent of ribosome AT5G16130 mRNA, complete cds Length = 878 Score = 44.1 bits (22), Expect = 0.59 Identities = 34/38 (89%) Strand = Plus / Minus Query: 378 tccttgccgctgaacttcttctcgagctccctgacgag 415 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 215 atcaagacg 223 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AY940168.1| Cyanophage P-SSM4, complete genome Length = 178249 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 caagaagatcttgatgattttc 209 |||||||||||||||||||||| Sbjct: 153250 caagaagatcttgatgattttc 153271
>ref|XM_963054.1| PREDICTED: Tribolium castaneum similar to CG1883-PA, isoform A (LOC656528), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 371 aacaacgtccttgccgctgaacttcttctc 400 |||||||| |||||||||||||||||||| Sbjct: 307 aacaacgtgtttgccgctgaacttcttctc 278
>gb|AF402815.1| Ictalurus punctatus 40S ribosomal protein S7 mRNA, complete cds Length = 641 Score = 44.1 bits (22), Expect = 0.59 Identities = 34/38 (89%) Strand = Plus / Minus Query: 380 cttgccgctgaacttcttctcgagctccctgacgagcc 417 |||||| |||||||||||||| ||||||| ||||||| Sbjct: 292 cttgccactgaacttcttctccagctcccgcacgagcc 255
>gb|BT024914.1| Arabidopsis thaliana At5g16130 mRNA, complete cds Length = 573 Score = 44.1 bits (22), Expect = 0.59 Identities = 34/38 (89%) Strand = Plus / Minus Query: 378 tccttgccgctgaacttcttctcgagctccctgacgag 415 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 275 tcctttccactgaacttcttctcaagctctctgacgag 238 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 498 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 439 Query: 215 atcaagacg 223 ||||||||| Sbjct: 438 atcaagacg 430
>emb|BX085194.14| Zebrafish DNA sequence from clone DKEY-242M13, complete sequence Length = 169865 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 atattaatacatgaacaagaga 43 |||||||||||||||||||||| Sbjct: 6333 atattaatacatgaacaagaga 6312
>emb|BX248232.11| Zebrafish DNA sequence from clone CH211-232I5, complete sequence Length = 152609 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 atattaatacatgaacaagaga 43 |||||||||||||||||||||| Sbjct: 7096 atattaatacatgaacaagaga 7117
>emb|BX832565.1|CNS09ZKS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 44.1 bits (22), Expect = 0.59 Identities = 34/38 (89%) Strand = Plus / Minus Query: 378 tccttgccgctgaacttcttctcgagctccctgacgag 415 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 330 tcctttccactgaacttcttctcaagctctctgacgag 293 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 553 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 494 Query: 215 atcaagacg 223 ||||||||| Sbjct: 493 atcaagacg 485
>gb|AY086292.1| Arabidopsis thaliana clone 23518 mRNA, complete sequence Length = 872 Score = 44.1 bits (22), Expect = 0.59 Identities = 34/38 (89%) Strand = Plus / Minus Query: 378 tccttgccgctgaacttcttctcgagctccctgacgag 415 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 215 atcaagacg 223 ||||||||| Sbjct: 567 atcaagacg 559
>ref|XM_309625.2| Anopheles gambiae str. PEST ENSANGP00000004072 (ENSANGG00000003234), partial mRNA Length = 1989 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 618 cttgtccttctggatcttcttc 639 |||||||||||||||||||||| Sbjct: 1560 cttgtccttctggatcttcttc 1539
>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 ctgaacttcttctcgagctccctgac 412 |||||||||||||||||||| ||||| Sbjct: 347 ctgaacttcttctcgagctctctgac 322 Score = 42.1 bits (21), Expect = 2.3 Identities = 93/117 (79%) Strand = Plus / Minus Query: 155 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 214 ||||||||| |||||||| | ||||| || ||||| | | ||| ||||| || | ||| Sbjct: 579 cttgtactcagtgttgttcctctccttaggctccaaatacaccttcatgatcttggtgcc 520 Query: 215 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 271 ||||| ||| |||||| ||| || || ||||||||||| |||||| | |||||||| Sbjct: 519 atcaacacggtatctggtacgctttccaacaatctcagcagggtaagcgacatcctc 463
>emb|AL731836.10| Mouse DNA sequence from clone RP23-119A13 on chromosome 2, complete sequence Length = 83802 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 473 ggccttcctgttccctgcaacatcca 498 |||||||||||| ||||||||||||| Sbjct: 58345 ggccttcctgtttcctgcaacatcca 58370
>gb|AY769321.1| Bombyx mori ribosomal protein S7 (RpS7) mRNA, complete cds Length = 657 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 387 ctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 431 ||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 275 ctgaacttcttttcgagctcacggacaagcctgatctggatcttc 231
>emb|AL353592.9| Human DNA sequence from clone RP11-569O12 on chromosome 13, complete sequence Length = 63325 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 tatccaacttgtactctgtgt 168 ||||||||||||||||||||| Sbjct: 33035 tatccaacttgtactctgtgt 33055
>gb|AF526221.1| Argopecten irradians isolate iolsaicl205ct237cn254 ribosomal protein S7 mRNA, complete cds Length = 651 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 384 ccgctgaacttcttctcgagctccctgac 412 |||||||||||||| || ||||||||||| Sbjct: 276 ccgctgaacttcttttccagctccctgac 248
>emb|AL391148.1|ATT21H19 Arabidopsis thaliana DNA chromosome 5, BAC clone T21H19 (ESSA project) Length = 77311 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 387 ctgaacttcttctcgagctccctgacgag 415 |||||||||||||| ||||| |||||||| Sbjct: 13437 ctgaacttcttctcaagctctctgacgag 13409
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 ctggaaggcggcgttgatgtagagg 524 |||||||||||| |||||||||||| Sbjct: 12815416 ctggaaggcggcattgatgtagagg 12815440
>emb|BX822663.1|CNS0A5ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 760 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 acaatctcagctgggtaaacaacatcctc 271 ||||||||||| |||||| |||||||||| Sbjct: 477 acaatctcagcagggtaagcaacatcctc 449
>gb|AY130375.1| Branchiostoma lanceolatum ribosomal protein S7 mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 cttgccgctgaacttcttctcgagctccc 408 |||||| |||||||||||||| ||||||| Sbjct: 241 cttgccactgaacttcttctccagctccc 213
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence Length = 78121 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 gggtggcctcacaatccgcct 358 ||||||||||||||||||||| Sbjct: 28376 gggtggcctcacaatccgcct 28396
>dbj|AK173962.1| Ciona intestinalis cDNA, clone:cixxx00042, full insert sequence Length = 675 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ttgccgctgaacttcttctcgagctccct 409 |||||||| ||||||||||| |||||||| Sbjct: 361 ttgccgctaaacttcttctctagctccct 389
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 ctggaaggcggcgttgatgtagagg 524 |||||||||||| |||||||||||| Sbjct: 73540 ctggaaggcggcattgatgtagagg 73564
>dbj|AK112218.1| Ciona intestinalis cDNA, clone:ciad004i11, full insert sequence Length = 730 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 ttgccgctgaacttcttctcgagctccct 409 |||||||| ||||||||||| |||||||| Sbjct: 351 ttgccgctaaacttcttctctagctccct 323
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ccacatccttgccacaaagc 125 |||||||||||||||||||| Sbjct: 118232 ccacatccttgccacaaagc 118213
>ref|XM_581800.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S7 (S8) (LOC505507), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 acgtccttgccgctgaacttcttctcgagctc 406 |||| ||| ||||||||||||||||| ||||| Sbjct: 803 acgtgcttcccgctgaacttcttctccagctc 772
>ref|XM_425623.1| PREDICTED: Gallus gallus similar to Protocadherin 8 precursor (Arcadlin) (LOC428065), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gtccttgccgctgaacttct 396 |||||||||||||||||||| Sbjct: 2832 gtccttgccgctgaacttct 2813
>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete sequence Length = 154633 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcctccaaaagaccatcatg 286 |||||||||||||||||||| Sbjct: 14399 tcctccaaaagaccatcatg 14418
>emb|CR847946.7| Zebrafish DNA sequence from clone CH211-274N1 in linkage group 18, complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 aacaacagcagaaccttttttggg 340 ||||| |||||||||||||||||| Sbjct: 88104 aacaaaagcagaaccttttttggg 88081
>emb|X85811.1|SCTRNAORF S.cerevisiae tRNA-Leu, and ORF's N2212, N2215, N2219, N2223, N2227, N2231 Length = 14261 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tgaacagcagtcaaagttct 304 |||||||||||||||||||| Sbjct: 1311 tgaacagcagtcaaagttct 1330
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 acttcttctcgagctccctg 410 |||||||||||||||||||| Sbjct: 105724 acttcttctcgagctccctg 105743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 acttcttctcgagctccctg 410 |||||||||||||||||||| Sbjct: 66009 acttcttctcgagctccctg 66028
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgaacagcagtcaaagttct 304 |||||||||||||||||||| Sbjct: 215257 tgaacagcagtcaaagttct 215238
>gb|DQ066326.1| Ixodes scapularis isolate IS-6-12L-109 40S ribosomal protein S7-like mRNA, partial cds Length = 594 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 gccgctgaacttcttctcgagctc 406 |||||||||||||||||| ||||| Sbjct: 300 gccgctgaacttcttctccagctc 277
>gb|AC016703.7| Homo sapiens BAC clone RP11-194L1 from 2, complete sequence Length = 33571 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tgtagaggtcttttgacgtc 536 |||||||||||||||||||| Sbjct: 25309 tgtagaggtcttttgacgtc 25328
>gb|AF543540.1| Oncorhynchus mykiss 40S ribosomal protein S7 mRNA, partial cds Length = 132 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 384 ccgctgaacttcttctcgagctccctgacgag 415 |||||||||||||| || |||||||| ||||| Sbjct: 38 ccgctgaacttcttttccagctccctcacgag 7
>ref|XM_317713.2| Anopheles gambiae str. PEST ENSANGP00000010255 (ENSANGG00000007766), partial mRNA Length = 921 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 atcttgatgattttcgagcc 214 |||||||||||||||||||| Sbjct: 713 atcttgatgattttcgagcc 694
>ref|NM_208681.1| Eremothecium gossypii ACL076Wp (ACL076W), mRNA Length = 573 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgaacagcagtcaaagttct 304 |||||||||||||||||||| Sbjct: 365 tgaacagcagtcaaagttct 346
>emb|Z71372.1|SCYNL096C S.cerevisiae chromosome XIV reading frame ORF YNL096c Length = 2553 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tgaacagcagtcaaagttct 304 |||||||||||||||||||| Sbjct: 1248 tgaacagcagtcaaagttct 1267
>gb|DQ333046.1| Synthetic construct Saccharomyces cerevisiae clone FLH005626.01X RPS7B gene, complete sequence Length = 918 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgaacagcagtcaaagttct 304 |||||||||||||||||||| Sbjct: 710 tgaacagcagtcaaagttct 691
>emb|CT032657.1| Platynereis dumerilii EST IB0AAA33DH04EM1 Length = 652 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ttgccgctgaacttcttctc 400 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032656.1| Platynereis dumerilii EST IB0AAA33DH04FM1 Length = 652 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ttgccgctgaacttcttctc 400 |||||||||||||||||||| Sbjct: 375 ttgccgctgaacttcttctc 394
>emb|CT032509.1| Platynereis dumerilii EST IB0AAA37AD11EM1 Length = 682 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ttgccgctgaacttcttctc 400 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032319.1| Platynereis dumerilii EST IB0AAA40DA08EM1 Length = 783 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ttgccgctgaacttcttctc 400 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032256.1| Platynereis dumerilii EST IB0AAA42AH05EM1 Length = 810 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ttgccgctgaacttcttctc 400 |||||||||||||||||||| Sbjct: 312 ttgccgctgaacttcttctc 293
>emb|AM159218.1| Oncorhynchus mykiss mRNA for 40S ribosomal protein S7 (rps7 gene) Length = 718 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 384 ccgctgaacttcttctcgagctccctgacgag 415 |||||||||||||| || |||||||| ||||| Sbjct: 399 ccgctgaacttcttttccagctccctcacgag 368
>gb|DQ115393.1| Saccharomyces cerevisiae Pol1p (POL1) gene, partial cds; and Avt4p (AVT4), Ynl100wp (YNL100W), Oca1p (OCA1), Ras2p (RAS2), Ynl097c-bp (YNL097C-B), Pho23p (PHO23), Rps7bp (RPS7B), Ynl095cp (YNL095C), App1p (APP1), Ypt53p (YPT53), Ynl092wp (YNL092W), Nst1p (NST1), Rho2p (RHO2), Ynl089cp (YNL089C), Top2p (TOP2), Tcb2p (TCB2), Ynl086wp (YNL086W), Mkt1p (MKT1), End3p (END3), Sal1p (SAL1), Pms1p (PMS1), Sws2p (SWS2), Ynl080cp (YNL080C), and Tpm1p (TPM1) genes, complete cds Length = 48787 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tgaacagcagtcaaagttct 304 |||||||||||||||||||| Sbjct: 13003 tgaacagcagtcaaagttct 13022 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,405,104 Number of Sequences: 3902068 Number of extensions: 5405104 Number of successful extensions: 111835 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111392 Number of HSP's gapped (non-prelim): 409 length of query: 671 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 648 effective length of database: 17,143,297,704 effective search space: 11108856912192 effective search space used: 11108856912192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)