Clone Name	rbags14l08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY465119.1| Hordeum vulgare two-pore calcium channel (TPC1) m...	704	0.0
2	gb|AY114121.1| Triticum aestivum putative calcium channel mRNA, ...	391	e-105
3	dbj|AB071014.1| Oryza sativa OsTPC1 mRNA for putative two-pore c...	188	2e-44
4	dbj|AB100696.1| Oryza sativa (japonica cultivar-group) OsTPC1 mR...	188	2e-44
5	dbj|AK100998.1| Oryza sativa (japonica cultivar-group) cDNA clon...	188	2e-44
6	dbj|AK067839.1| Oryza sativa (japonica cultivar-group) cDNA clon...	188	2e-44
7	ref|NM_192030.1| Oryza sativa (japonica cultivar-group), predic...	127	5e-26
8	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	100	1e-17
9	dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D...	100	1e-17
10	gb|AY111540.1| Zea mays CL14040_1 mRNA sequence	76	2e-10
11	gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Canc...	44	0.57
12	gb|AC007491.7| Homo sapiens chromosome 16 clone RP11-182C10, com...	44	0.57
13	gb|AY579780.1| Avian pneumovirus from USA, complete genome	42	2.2
14	emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chro...	42	2.2
15	ref|XM_811868.1| Trypanosoma cruzi strain CL Brener hypothetical...	42	2.2
16	emb|AL360088.5| Human DNA sequence from clone RP11-2A6 on chromo...	42	2.2
17	emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k1...	42	2.2
18	gb|AY028578.1| Avian pneumovirus MN/7 phosphoprotein (P) gene, c...	42	2.2
19	gb|AY028572.1| Avian pneumovirus MN/2B phosphoprotein (P) gene, ...	42	2.2
20	gb|AY028571.1| Avian pneumovirus MN/2A phosphoprotein (P) gene, ...	42	2.2
21	gb|AY028570.1| Avian pneumovirus MN/1B phosphoprotein (P) gene, ...	42	2.2
22	gb|AY028569.1| Avian pneumovirus MN/1A phosphoprotein (P) gene, ...	42	2.2
23	gb|AF176591.1|AF176591 Avian pneumovirus strain United States (C...	42	2.2
24	dbj|AK170265.1| Mus musculus NOD-derived CD11c +ve dendritic cel...	42	2.2
25	gb|AF368174.1|AF368174 Avian pneumovirus phosphoprotein gene, co...	42	2.2
26	gb|AY590688.1| Avian pneumovirus strain Colorado, complete genome	42	2.2
27	dbj|AB124646.1| Nicotiana tabacum NtTPC1A mRNA for two-pore calc...	42	2.2
28	ref|NM_032797.4| Homo sapiens apoptosis-inducing factor (AIF)-li...	40	8.9
29	gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome ...	40	8.9
30	ref|XM_637509.1| Dictyostelium discoideum hypothetical protein (...	40	8.9
31	gb|AY431924.1| Aedes aegypti ASAP ID: 43272 unknown mRNA sequence	40	8.9
32	gb|BC023601.2| Homo sapiens apoptosis-inducing factor (AIF)-like...	40	8.9
33	gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124...	40	8.9
34	gb|AC125453.6| Homo sapiens chromosome 8, clone RP11-1049H7, com...	40	8.9
35	gb|AC127365.4| Mus musculus BAC clone RP23-8K10 from 3, complete...	40	8.9
36	gb|AC121801.2| Mus musculus BAC clone RP23-432P18 from 14, compl...	40	8.9
37	gb|AF239614.5| Homo sapiens chromosome 8 clone RP11-410N18, comp...	40	8.9
38	gb|AC107806.10| Mus musculus chromosome 3, clone RP23-55C1, comp...	40	8.9
39	emb|AL731540.4| Human DNA sequence from clone RP11-367H5 on chro...	40	8.9
40	gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, comple...	40	8.9
41	gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, com...	40	8.9
42	emb|CR861233.1| Pongo pygmaeus mRNA; cDNA DKFZp459F193 (from clo...	40	8.9
43	emb|BX537621.1|HSM806393 Homo sapiens mRNA; cDNA DKFZp686H14188 ...	40	8.9
44	gb|AF506757.1| Homo sapiens AMID protein mRNA, complete cds	40	8.9
45	gb|AC090097.5| Homo sapiens chromosome 8, clone RP11-369C6, comp...	40	8.9
46	dbj|AK127353.1| Homo sapiens cDNA FLJ45427 fis, clone BRHIP3038030	40	8.9
47	emb|CR622972.1| full-length cDNA clone CS0DK002YO17 of HeLa cell...	40	8.9
48	dbj|AK027403.1| Homo sapiens cDNA FLJ14497 fis, clone NT2RM1000039	40	8.9
49	gb|AC105243.5| Homo sapiens chromosome 18, clone CTD-2354A18, co...	40	8.9
50	gb|AC023442.17| Homo sapiens chromosome 11, clone RP11-375D13, c...	40	8.9
51	gb|AC105216.3| Homo sapiens chromosome 18, clone RP11-382C11, co...	40	8.9
52	gb|AC087170.6| Homo sapiens chromosome 8, clone RP11-258J10, com...	40	8.9
53	gb|AC092844.4| Homo sapiens BAC clone RP11-421A16 from 2, comple...	40	8.9
54	gb|AC103776.3| Homo sapiens chromosome 8, clone RP11-42O14, comp...	40	8.9
55	gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Can...	40	8.9
56	gb|BC092310.1| Xenopus laevis cDNA clone MGC:115280 IMAGE:664369...	40	8.9
57	gb|BC006121.1| Homo sapiens apoptosis-inducing factor (AIF)-like...	40	8.9
58	gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp...	40	8.9
59	emb|AL646049.14| Mouse DNA sequence from clone RP23-63A9 on chro...	40	8.9

---

>gb|AY465119.1| Hordeum vulgare two-pore calcium channel (TPC1) mRNA, complete cds
          Length = 2409

 Score =  704 bits (355), Expect = 0.0
 Identities = 369/371 (99%), Gaps = 2/371 (0%)
 Strand = Plus / Minus

                                                                        
Query: 279  agaggaagcaaatcgagtccgtcacagctctactcaaaaatttatcgtggctgctacaca 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 agaggaagcaaatcgagtccgtcacagctctactcaaaaatttatcgtggctgctacaca 2350

                                                                        
Query: 339  ctccatgcttgggaatatggtggttgtaatcattcatgtacgttttcatcaggaaggcgc 398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2349 ctccatgcttgggaatatggtggttgtaatcattcatgtacgttttcatcaggaaggcgc 2290

                                                                        
Query: 399  tcgtgtattttcttgcttccatccagtcattgatcaagagttttgagatccatcaagttc 458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2289 tcgtgtattttcttgcttccatccagtcattgatcaagagttttgagatccatcaagttc 2230

                                                                        
Query: 459  attgctcagcatatggtgcagaagaatatcaacccatcgtaccctttgacctcacacgca 518
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2229 attgctcagcatatggtgcagaagaatatcaa-ccatcgtaccctttgacctcacacgca 2171

                                                                        
Query: 519  tagacccgacgtttctttattcctccagacgtaggactctggatatcaacctcttcacct 578
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2170 taga-ccgacgtttctttattcctccagacgtaggactctggatatcaacctcttcacct 2112

                                                                        
Query: 579  ttctccagttccatctcagcaaaaaatgcctccaatacaaatgctacaatcagattaagc 638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 ttctccagttccatctcagcaaaaaatgcctccaatacaaatgctacaatcagattaagc 2052

                       
Query: 639  agtagtaatat 649
            |||||||||||
Sbjct: 2051 agtagtaatat 2041

---

>gb|AY114121.1| Triticum aestivum putative calcium channel mRNA, complete cds
          Length = 2841

 Score =  391 bits (197), Expect = e-105
 Identities = 223/229 (97%), Gaps = 2/229 (0%)
 Strand = Plus / Minus

                                                                        
Query: 421  ccagtcattgatcaagagttttgagatccatcaagttcattgctcagcatatggtgcaga 480
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 ccagtcattgttcaagagttttgagatccatcaagttcattgctcagcatatggtgcaga 2298

                                                                        
Query: 481  agaatatcaacccatcgtaccctttgacctcacacgcatagacccgacgtttctttattc 540
            |||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 2297 agaatatcaacc-atcgtaccctttgacctcacacgcatagaccgg-cgtttctttattc 2240

                                                                        
Query: 541  ctccagacgtaggactctggatatcaacctcttcacctttctccagttccatctcagcaa 600
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 ctccagacgtaggattctggatatcaacctcttcacctttctccagttccatctcagcaa 2180

                                                             
Query: 601  aaaatgcctccaatacaaatgctacaatcagattaagcagtagtaatat 649
            ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2179 aaaatgcctccaacacaaatgctacaatcagattaagcagtagtaatat 2131



 Score =  299 bits (151), Expect = 6e-78
 Identities = 192/202 (95%), Gaps = 4/202 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   gtaccagagcctgtagtatcatattgattt-ccagtacagttcc-ttttgttttatacaa 102
            |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 2827 gtaccagagcctgtagtatcatattgattttccagtacagttcccttttgttttatacaa 2768

                                                                        
Query: 103  gttgctgactacactttgaagtggtgacttgaactcttctttagttgcttgttggtatgc 162
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 2767 gttgctgactacactttgaagtggtgacttgaactcttctatagttgcttgttggtatgt 2708

                                                                        
Query: 163  tgactgagac--agagtatataaaactctaccagactgacagacagcagtataaaatcga 220
            ||||||||||  || || |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2707 tgactgagacggagtgtgtataaaactctaccagactgacagacagcagtatcaaatcga 2648

                                  
Query: 221  cccgacacaaatacgcatattc 242
            ||||| ||||||||||||||||
Sbjct: 2647 cccgatacaaatacgcatattc 2626



 Score =  198 bits (100), Expect = 2e-47
 Identities = 158/176 (89%), Gaps = 1/176 (0%)
 Strand = Plus / Minus

                                                                        
Query: 247  tacgcatattcgatgtatttcttgatgatgaaagaggaagcaaatcgagtccgtcacagc 306
            ||||||||||| ||||||||||||||  ||||| | |||||||||||||||||| |||||
Sbjct: 2636 tacgcatattcaatgtatttcttgatactgaaaaaagaagcaaatcgagtccgttacagc 2577

                                                                        
Query: 307  tctactcaaaaatttatcgtggctgctacacactccatgcttgggaatatggtggttgta 366
             ||||||| |||||||||  |||||||||| |||||||||||||||||||  ||||||||
Sbjct: 2576 actactcagaaatttatcacggctgctacatactccatgcttgggaatatactggttgta 2517

                                                                    
Query: 367  atcattcatgtacgttttcatcaggaaggcgctcgtgtattttcttgcttccatcc 422
            ||||||||||||| |||||| |||||| | | ||||||||||||||||||||||||
Sbjct: 2516 atcattcatgtactttttcaccaggaa-gtgttcgtgtattttcttgcttccatcc 2462

---

>dbj|AB071014.1| Oryza sativa OsTPC1 mRNA for putative two-pore calcium channel,
            complete cds
          Length = 2274

 Score =  188 bits (95), Expect = 2e-44
 Identities = 184/211 (87%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                        
Query: 438  gttttgagatccatcaagttcattgctcagcatatggtgcagaagaatatcaacccatcg 497
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |
Sbjct: 2262 gttttgagatccatcaagttcattgctcaacatatggtgaagaagaatatcaacc-atgg 2204

                                                                        
Query: 498  taccctttgacctcacacgcatagacccgacgtttctttattcctccagacgtaggactc 557
            | ||||||| ||||||||||| ||| | | ||  | ||| ||||| |  | ||||||  |
Sbjct: 2203 tcccctttgtcctcacacgcacagatc-gccgcctgtttcttccttccaaagtaggatcc 2145

                                                                        
Query: 558  tggatatcaacctcttcacctttctccagttccatctcagcaaaaaatgcctccaataca 617
            ||||||||| | ||  || ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2144 tggatatcagcttcgccatctttctccagttccatctcagcaaaaaatgcctccaacaca 2085

                                           
Query: 618  aatgctacaatcagattaagcagtagtaata 648
            ||||||||||||||||||||||| |||||||
Sbjct: 2084 aatgctacaatcagattaagcagcagtaata 2054

---

>dbj|AB100696.1| Oryza sativa (japonica cultivar-group) OsTPC1 mRNA for calcium
            channel, complete cds
          Length = 2823

 Score =  188 bits (95), Expect = 2e-44
 Identities = 184/211 (87%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                        
Query: 438  gttttgagatccatcaagttcattgctcagcatatggtgcagaagaatatcaacccatcg 497
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |
Sbjct: 2405 gttttgagatccatcaagttcattgctcaacatatggtgaagaagaatatcaacc-atgg 2347

                                                                        
Query: 498  taccctttgacctcacacgcatagacccgacgtttctttattcctccagacgtaggactc 557
            | ||||||| ||||||||||| ||| | | ||  | ||| ||||| |  | ||||||  |
Sbjct: 2346 tcccctttgtcctcacacgcacagatc-gccgcctgtttcttccttccaaagtaggatcc 2288

                                                                        
Query: 558  tggatatcaacctcttcacctttctccagttccatctcagcaaaaaatgcctccaataca 617
            ||||||||| | ||  || ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2287 tggatatcagcttcgccatctttctccagttccatctcagcaaaaaatgcctccaacaca 2228

                                           
Query: 618  aatgctacaatcagattaagcagtagtaata 648
            ||||||||||||||||||||||| |||||||
Sbjct: 2227 aatgctacaatcagattaagcagcagtaata 2197

---

>dbj|AK100998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146P13, full
            insert sequence
          Length = 2804

 Score =  188 bits (95), Expect = 2e-44
 Identities = 184/211 (87%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                        
Query: 438  gttttgagatccatcaagttcattgctcagcatatggtgcagaagaatatcaacccatcg 497
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |
Sbjct: 2353 gttttgagatccatcaagttcattgctcaacatatggtgaagaagaatatcaacc-atgg 2295

                                                                        
Query: 498  taccctttgacctcacacgcatagacccgacgtttctttattcctccagacgtaggactc 557
            | ||||||| ||||||||||| ||| | | ||  | ||| ||||| |  | ||||||  |
Sbjct: 2294 tcccctttgtcctcacacgcacagatc-gccgcctgtttcttccttccaaagtaggatcc 2236

                                                                        
Query: 558  tggatatcaacctcttcacctttctccagttccatctcagcaaaaaatgcctccaataca 617
            ||||||||| | ||  || ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2235 tggatatcagcttcgccatctttctccagttccatctcagcaaaaaatgcctccaacaca 2176

                                           
Query: 618  aatgctacaatcagattaagcagtagtaata 648
            ||||||||||||||||||||||| |||||||
Sbjct: 2175 aatgctacaatcagattaagcagcagtaata 2145

---

>dbj|AK067839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126J24, full
            insert sequence
          Length = 2791

 Score =  188 bits (95), Expect = 2e-44
 Identities = 184/211 (87%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                        
Query: 438  gttttgagatccatcaagttcattgctcagcatatggtgcagaagaatatcaacccatcg 497
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |
Sbjct: 2405 gttttgagatccatcaagttcattgctcaacatatggtgaagaagaatatcaacc-atgg 2347

                                                                        
Query: 498  taccctttgacctcacacgcatagacccgacgtttctttattcctccagacgtaggactc 557
            | ||||||| ||||||||||| ||| | | ||  | ||| ||||| |  | ||||||  |
Sbjct: 2346 tcccctttgtcctcacacgcacagatc-gccgcctgtttcttccttccaaagtaggatcc 2288

                                                                        
Query: 558  tggatatcaacctcttcacctttctccagttccatctcagcaaaaaatgcctccaataca 617
            ||||||||| | ||  || ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2287 tggatatcagcttcgccatctttctccagttccatctcagcaaaaaatgcctccaacaca 2228

                                           
Query: 618  aatgctacaatcagattaagcagtagtaata 648
            ||||||||||||||||||||||| |||||||
Sbjct: 2227 aatgctacaatcagattaagcagcagtaata 2197

---

>ref|NM_192030.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2016

 Score =  127 bits (64), Expect = 5e-26
 Identities = 70/72 (97%)
 Strand = Plus / Minus

                                                                        
Query: 577  ctttctccagttccatctcagcaaaaaatgcctccaatacaaatgctacaatcagattaa 636
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1969 ctttctccagttccatctcagcaaaaaatgcctccaacacaaatgctacaatcagattaa 1910

                        
Query: 637  gcagtagtaata 648
            |||| |||||||
Sbjct: 1909 gcagcagtaata 1898

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                            
Query: 438      gttttgagatccatcaagttcattgctcagcatatggtgcagaagaatatcaacccatcg 497
                ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||| |
Sbjct: 27900917 gttttgagatccatcaagttcattgctcaacatatggtgaagaagaatatcaa-ccatgg 27900975

                                  
Query: 498      taccctttgacctcacac 515
                | ||||||| ||||||||
Sbjct: 27900976 tcccctttgtcctcacac 27900993



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                     
Query: 577      ctttctccagttccatctcagcaaaaaatgcctccaatacaaatgctacaatc 629
                ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 27901693 ctttctccagttccatctcagcaaaaaatgcctccaacacaaatgctacaatc 27901745

---

>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144G04
          Length = 194459

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                         
Query: 438   gttttgagatccatcaagttcattgctcagcatatggtgcagaagaatatcaacccatcg 497
             ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||| |
Sbjct: 87598 gttttgagatccatcaagttcattgctcaacatatggtgaagaagaatatcaa-ccatgg 87656

                               
Query: 498   taccctttgacctcacac 515
             | ||||||| ||||||||
Sbjct: 87657 tcccctttgtcctcacac 87674



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                  
Query: 577   ctttctccagttccatctcagcaaaaaatgcctccaatacaaatgctacaatc 629
             ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 88374 ctttctccagttccatctcagcaaaaaatgcctccaacacaaatgctacaatc 88426

---

>gb|AY111540.1| Zea mays CL14040_1 mRNA sequence
          Length = 700

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 577 ctttctccagttccatctcagcaaaaaatgcctccaatacaaatgctacaatcagattaa 636
           ||||||||||||||||||||||       |||||||| |||||||| |||||||||||||
Sbjct: 361 ctttctccagttccatctcagcnnnnnncgcctccaacacaaatgccacaatcagattaa 420

                       
Query: 637 gcagtagtaata 648
           |||| |||||||
Sbjct: 421 gcagcagtaata 432

---

>gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 211335

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 568   cctcttcacctttctccagttc 589
             ||||||||||||||||||||||
Sbjct: 41360 cctcttcacctttctccagttc 41381

---

>gb|AC007491.7| Homo sapiens chromosome 16 clone RP11-182C10, complete sequence
          Length = 180888

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 568   cctcttcacctttctccagttc 589
             ||||||||||||||||||||||
Sbjct: 38250 cctcttcacctttctccagttc 38271

---

>gb|AY579780.1| Avian pneumovirus from USA, complete genome
          Length = 13134

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 270  gatgatgaaagaggaagcaaa 290
            |||||||||||||||||||||
Sbjct: 1956 gatgatgaaagaggaagcaaa 1976

---

>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete
             sequence
          Length = 218000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 574   cacctttctccagttccatct 594
             |||||||||||||||||||||
Sbjct: 66875 cacctttctccagttccatct 66855

---

>ref|XM_811868.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508547.140) partial mRNA
          Length = 1449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 596 agcaaaaaatgcctccaatac 616
           |||||||||||||||||||||
Sbjct: 27  agcaaaaaatgcctccaatac 7

---

>emb|AL360088.5| Human DNA sequence from clone RP11-2A6 on chromosome 1 Contains STSs and
              GSSs, complete sequence
          Length = 164013

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 580    tctccagttccatctcagcaaaaaa 604
              ||||||||||| |||||||||||||
Sbjct: 117971 tctccagttccttctcagcaaaaaa 117995

---

>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE
          Length = 132450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 561   atatcaacctcttcacctttctcca 585
             |||||||||||| ||||||||||||
Sbjct: 58855 atatcaacctctccacctttctcca 58831

---

>gb|AY028578.1| Avian pneumovirus MN/7 phosphoprotein (P) gene, complete cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>gb|AY028572.1| Avian pneumovirus MN/2B phosphoprotein (P) gene, complete cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>gb|AY028571.1| Avian pneumovirus MN/2A phosphoprotein (P) gene, complete cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>gb|AY028570.1| Avian pneumovirus MN/1B phosphoprotein (P) gene, complete cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>gb|AY028569.1| Avian pneumovirus MN/1A phosphoprotein (P) gene, complete cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>gb|AF176591.1|AF176591 Avian pneumovirus strain United States (Colorado) phosphoprotein
           (P) gene, complete cds
          Length = 910

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>dbj|AK170265.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630039I20
           product:unclassifiable, full insert sequence
          Length = 2080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 574 cacctttctccagttccatct 594
           |||||||||||||||||||||
Sbjct: 701 cacctttctccagttccatct 681

---

>gb|AF368174.1|AF368174 Avian pneumovirus phosphoprotein gene, complete cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gatgatgaaagaggaagcaaa 290
           |||||||||||||||||||||
Sbjct: 709 gatgatgaaagaggaagcaaa 729

---

>gb|AY590688.1| Avian pneumovirus strain Colorado, complete genome
          Length = 14150

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 270  gatgatgaaagaggaagcaaa 290
            |||||||||||||||||||||
Sbjct: 1956 gatgatgaaagaggaagcaaa 1976

---

>dbj|AB124646.1| Nicotiana tabacum NtTPC1A mRNA for two-pore calcium channel, complete
            cds
          Length = 2477

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 602  aaatgcctccaatacaaatgctacaatca 630
            |||||| ||||| ||||||||||||||||
Sbjct: 2109 aaatgcttccaagacaaatgctacaatca 2081

---

>ref|NM_032797.4| Homo sapiens apoptosis-inducing factor (AIF)-like
            mitochondrion-associated inducer of death (AMID), mRNA
          Length = 3240

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1490 ttttgttttatacaagttgc 1471

---

>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence
          Length = 206083

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     gtatcatattgatttccagt 79
              ||||||||||||||||||||
Sbjct: 142594 gtatcatattgatttccagt 142613

---

>ref|XM_637509.1| Dictyostelium discoideum hypothetical protein (DDB0169204), partial
           mRNA
          Length = 234

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 561 atatcaacctcttcaccttt 580
           ||||||||||||||||||||
Sbjct: 65  atatcaacctcttcaccttt 46

---

>gb|AY431924.1| Aedes aegypti ASAP ID: 43272 unknown mRNA sequence
          Length = 448

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 578 tttctccagttccatctcag 597
           ||||||||||||||||||||
Sbjct: 346 tttctccagttccatctcag 365

---

>gb|BC023601.2| Homo sapiens apoptosis-inducing factor (AIF)-like
            mitochondrion-associated inducer of death, mRNA (cDNA
            clone MGC:23230 IMAGE:4548458), complete cds
          Length = 1540

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1477 ttttgttttatacaagttgc 1458

---

>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4,
             complete sequence
          Length = 183648

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   atatcaacctcttcaccttt 580
             ||||||||||||||||||||
Sbjct: 13887 atatcaacctcttcaccttt 13868

---

>gb|AC125453.6| Homo sapiens chromosome 8, clone RP11-1049H7, complete sequence
          Length = 186608

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 406    ttttcttgcttccatccagtcatt 429
              ||||||| ||||||||||||||||
Sbjct: 124628 ttttcttccttccatccagtcatt 124605

---

>gb|AC127365.4| Mus musculus BAC clone RP23-8K10 from 3, complete sequence
          Length = 191217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 355    atggtggttgtaatcattcatgta 378
              ||||||||||||| ||||||||||
Sbjct: 120655 atggtggttgtaaacattcatgta 120632

---

>gb|AC121801.2| Mus musculus BAC clone RP23-432P18 from 14, complete sequence
          Length = 194612

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   taccctttgacctcacacgc 517
             ||||||||||||||||||||
Sbjct: 87529 taccctttgacctcacacgc 87510

---

>gb|AF239614.5| Homo sapiens chromosome 8 clone RP11-410N18, complete sequence
          Length = 152042

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 406   ttttcttgcttccatccagtcatt 429
             ||||||| ||||||||||||||||
Sbjct: 27502 ttttcttccttccatccagtcatt 27525

---

>gb|AC107806.10| Mus musculus chromosome 3, clone RP23-55C1, complete sequence
          Length = 214411

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 355    atggtggttgtaatcattcatgta 378
              ||||||||||||| ||||||||||
Sbjct: 157365 atggtggttgtaaacattcatgta 157388

---

>emb|AL731540.4| Human DNA sequence from clone RP11-367H5 on chromosome 10 Contains the
             H2AFY2 gene for H2A histone family (member Y2), the gene
             for apoptosis-inducing factor (AIF)-homologous
             mitochondrion-associated inducer of death (AMID), a novel
             gene (MGC34695), the SARA1 gene for SAR1a gene homolog 1
             (S. cerevisiae), the PP gene for pyrophosphatase
             (inorganic), a novel gene and five CpG islands, complete
             sequence
          Length = 186875

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    ttttgttttatacaagttgc 107
             ||||||||||||||||||||
Sbjct: 56566 ttttgttttatacaagttgc 56585

---

>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttacagaaaaatgtaccaga 52
              ||||||||||||||||||||
Sbjct: 129342 ttacagaaaaatgtaccaga 129323

---

>gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 582   tccagttccatctcagcaaa 601
             ||||||||||||||||||||
Sbjct: 40085 tccagttccatctcagcaaa 40066

---

>emb|CR861233.1| Pongo pygmaeus mRNA; cDNA DKFZp459F193 (from clone DKFZp459F193)
          Length = 3289

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1516 ttttgttttatacaagttgc 1497

---

>emb|BX537621.1|HSM806393 Homo sapiens mRNA; cDNA DKFZp686H14188 (from clone DKFZp686H14188)
          Length = 3895

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 2127 ttttgttttatacaagttgc 2108

---

>gb|AF506757.1| Homo sapiens AMID protein mRNA, complete cds
          Length = 1550

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1490 ttttgttttatacaagttgc 1471

---

>gb|AC090097.5| Homo sapiens chromosome 8, clone RP11-369C6, complete sequence
          Length = 170973

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    atgatgaaagaggaagcaaa 290
              ||||||||||||||||||||
Sbjct: 151925 atgatgaaagaggaagcaaa 151944

---

>dbj|AK127353.1| Homo sapiens cDNA FLJ45427 fis, clone BRHIP3038030
          Length = 4995

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 3245 ttttgttttatacaagttgc 3226

---

>emb|CR622972.1| full-length cDNA clone CS0DK002YO17 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 1330

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1292 ttttgttttatacaagttgc 1273

---

>dbj|AK027403.1| Homo sapiens cDNA FLJ14497 fis, clone NT2RM1000039
          Length = 3119

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1369 ttttgttttatacaagttgc 1350

---

>gb|AC105243.5| Homo sapiens chromosome 18, clone CTD-2354A18, complete sequence
          Length = 128935

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   agactgacagacagcagtataaaa 216
             |||||||||||||||| |||||||
Sbjct: 34318 agactgacagacagcactataaaa 34341

---

>gb|AC023442.17| Homo sapiens chromosome 11, clone RP11-375D13, complete sequence
          Length = 177644

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 582    tccagttccatctcagcaaa 601
              ||||||||||||||||||||
Sbjct: 148940 tccagttccatctcagcaaa 148921

---

>gb|AC105216.3| Homo sapiens chromosome 18, clone RP11-382C11, complete sequence
          Length = 154590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   agactgacagacagcagtataaaa 216
             |||||||||||||||| |||||||
Sbjct: 31212 agactgacagacagcactataaaa 31189

---

>gb|AC087170.6| Homo sapiens chromosome 8, clone RP11-258J10, complete sequence
          Length = 172443

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   atgatgaaagaggaagcaaa 290
             ||||||||||||||||||||
Sbjct: 55704 atgatgaaagaggaagcaaa 55723

---

>gb|AC092844.4| Homo sapiens BAC clone RP11-421A16 from 2, complete sequence
          Length = 85039

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   tcacagctctactcaaaaat 319
             ||||||||||||||||||||
Sbjct: 78819 tcacagctctactcaaaaat 78838

---

>gb|AC103776.3| Homo sapiens chromosome 8, clone RP11-42O14, complete sequence
          Length = 165995

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 406    ttttcttgcttccatccagtcatt 429
              ||||||| ||||||||||||||||
Sbjct: 162020 ttttcttccttccatccagtcatt 162043

---

>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191463

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 615    acaaatgctacaatcagatt 634
              ||||||||||||||||||||
Sbjct: 120469 acaaatgctacaatcagatt 120488

---

>gb|BC092310.1| Xenopus laevis cDNA clone MGC:115280 IMAGE:6643694, complete cds
          Length = 6847

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 598  caaaaaatgcctccaataca 617
            ||||||||||||||||||||
Sbjct: 6013 caaaaaatgcctccaataca 5994

---

>gb|BC006121.1| Homo sapiens apoptosis-inducing factor (AIF)-like
            mitochondrion-associated inducer of death, mRNA (cDNA
            clone MGC:13000 IMAGE:3506309), complete cds
          Length = 1369

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   ttttgttttatacaagttgc 107
            ||||||||||||||||||||
Sbjct: 1298 ttttgttttatacaagttgc 1279

---

>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   ttgaactcttctttagttgcttgt 154
             |||||| |||||||||||||||||
Sbjct: 67529 ttgaacacttctttagttgcttgt 67506

---

>emb|AL646049.14| Mouse DNA sequence from clone RP23-63A9 on chromosome X, complete
             sequence
          Length = 146105

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 362   ttgtaatcattcatgtacgttttc 385
             |||||||||||||| |||||||||
Sbjct: 62074 ttgtaatcattcatttacgttttc 62097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,789,396
Number of Sequences: 3902068
Number of extensions: 6789396
Number of successful extensions: 133111
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132945
Number of HSP's gapped (non-prelim): 154
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---