ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags14k09 |
|---|---|
| Clone Library Name | barley_pub |
>CSK22_ARATH (Q08466) Casein kinase II subunit alpha-2 (EC 2.7.11.1) (CK II)| Length = 333 Score = 54.7 bits (130), Expect = 9e-08 Identities = 25/30 (83%), Positives = 27/30 (90%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQVRAAENSRTRAQ 322 HQDRLTA+EAMAHPYF QVRAAE+SR R Q Sbjct: 304 HQDRLTAKEAMAHPYFAQVRAAESSRMRTQ 333
>CSK2A_MAIZE (P28523) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| (CK2-alpha) Length = 332 Score = 53.5 bits (127), Expect = 2e-07 Identities = 25/29 (86%), Positives = 26/29 (89%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQVRAAENSRTRA 325 HQ+RLTA EAM HPYF QVRAAENSRTRA Sbjct: 304 HQERLTALEAMTHPYFQQVRAAENSRTRA 332
>CSK23_ARATH (O64817) Probable casein kinase II subunit alpha (EC 2.7.11.1) (CK| II) Length = 333 Score = 52.4 bits (124), Expect = 4e-07 Identities = 24/30 (80%), Positives = 26/30 (86%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQVRAAENSRTRAQ 322 HQDRLTAREAM HPYF QV+AAE+SR R Q Sbjct: 304 HQDRLTAREAMDHPYFAQVKAAESSRLRTQ 333
>CSK21_ARATH (Q08467) Casein kinase II subunit alpha-1 (EC 2.7.11.1) (CK II)| Length = 333 Score = 51.6 bits (122), Expect = 7e-07 Identities = 24/30 (80%), Positives = 26/30 (86%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQVRAAENSRTRAQ 322 HQDRLTA+EAMAH YF QVRAAE SR R+Q Sbjct: 304 HQDRLTAKEAMAHAYFAQVRAAETSRMRSQ 333
>CSK2A_DROME (P08181) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 335 Score = 38.1 bits (87), Expect = 0.008 Identities = 16/19 (84%), Positives = 17/19 (89%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 H DRLTAREAMAHPYFL + Sbjct: 306 HVDRLTAREAMAHPYFLPI 324
>CSK2A_NEUCR (Q8TG13) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 336 Score = 37.0 bits (84), Expect = 0.018 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQVRAAENSRTRAQ 322 H +RLTA+EAMAHPYF VR + TRA+ Sbjct: 302 HNERLTAKEAMAHPYFAPVR---DEATRAR 328
>CSK21_RAT (P19139) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| Length = 391 Score = 35.0 bits (79), Expect = 0.070 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTAREAM HPYF V Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
>CSK21_RABIT (P33674) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| Length = 391 Score = 35.0 bits (79), Expect = 0.070 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTAREAM HPYF V Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
>CSK21_HUMAN (P68400) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| Length = 391 Score = 35.0 bits (79), Expect = 0.070 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTAREAM HPYF V Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
>CSK21_BOVIN (P68399) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| Length = 391 Score = 35.0 bits (79), Expect = 0.070 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTAREAM HPYF V Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
>CSK21_CHICK (P21868) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| Length = 391 Score = 34.7 bits (78), Expect = 0.092 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTAREAM HPYF + Sbjct: 309 HQSRLTAREAMEHPYFYPI 327
>CSK21_YEAST (P15790) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 372 Score = 34.7 bits (78), Expect = 0.092 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQVR 352 HQ+RLTA+EAM HP+F +R Sbjct: 348 HQERLTAKEAMGHPWFAPIR 367
>CSK22_MOUSE (O54833) Casein kinase II subunit alpha' (EC 2.7.11.1) (CK II)| Length = 350 Score = 33.9 bits (76), Expect = 0.16 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTA+EAM HPYF V Sbjct: 310 HQQRLTAKEAMEHPYFYPV 328
>CSK22_HUMAN (P19784) Casein kinase II subunit alpha' (EC 2.7.11.1) (CK II)| Length = 350 Score = 33.9 bits (76), Expect = 0.16 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTA+EAM HPYF V Sbjct: 310 HQQRLTAKEAMEHPYFYPV 328
>CSK22_CHICK (P21869) Casein kinase II subunit alpha' (EC 2.7.11.1) (CK II)| Length = 350 Score = 33.9 bits (76), Expect = 0.16 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTA+EAM HPYF V Sbjct: 310 HQQRLTAKEAMEHPYFYPV 328
>CSK22_BOVIN (P20427) Casein kinase II subunit alpha' (EC 2.7.11.1) (CK II)| Length = 350 Score = 33.9 bits (76), Expect = 0.16 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTA+EAM HPYF V Sbjct: 310 HQQRLTAKEAMEHPYFYPV 328
>CSK22_XENLA (P28020) Casein kinase II subunit alpha' (EC 2.7.11.1) (CK II)| Length = 392 Score = 33.9 bits (76), Expect = 0.16 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLTAREAM HPYF + Sbjct: 309 HQTRLTAREAMDHPYFYPI 327
>CSK2A_SCHPO (P40231) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 332 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = -1 Query: 411 HQDRLTAREAMAHPYF 364 HQ+RLT +EAMAHPYF Sbjct: 313 HQERLTCQEAMAHPYF 328
>CSK21_MOUSE (Q60737) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| Length = 391 Score = 32.0 bits (71), Expect = 0.59 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 HQ RLT REAM HP+F V Sbjct: 309 HQSRLTVREAMEHPFFYTV 327
>CSK2A_SPOFR (O76484) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 353 Score = 30.8 bits (68), Expect = 1.3 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 H +R TAREAM HPYF + Sbjct: 309 HYERYTAREAMDHPYFYPI 327
>MK12_RAT (Q63538) Mitogen-activated protein kinase 12 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 6) (ERK-6) (Stress-activated protein kinase 3) (Mitogen-activated protein kinase p38 gamma) (MAP kinase p38 gamma) Length = 367 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = -1 Query: 408 QDRLTAREAMAHPYFLQVRAAEN 340 + R+TA EA+AHPYF +R E+ Sbjct: 297 EQRVTAAEALAHPYFESLRDTED 319
>DEOC_LACJO (Q74IA4) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 237 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 102 HTFHVTCSVILYDCCLVKNXLC*VAXILNSVQP 4 H +HV C VI +C L K + +A I ++P Sbjct: 122 HKYHVPCKVIFENCYLTKEEIKKLAEIAKEIKP 154
>GSK3_SCHPO (Q10452) Protein kinase gsk3 (EC 2.7.11.1) (Protein kinaae skp1)| Length = 387 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = -1 Query: 405 DRLTAREAMAHPYFLQVR 352 DRLTA EAM HP+F ++R Sbjct: 303 DRLTAAEAMCHPFFDELR 320
>BACB_BACLI (O68007) Bacitracin synthetase 2 (BA2) [Includes: ATP-dependent| lysine adenylase (LysA) (Lysine activase); ATP-dependent D-ornithine adenylase (D-OrnA) (D-ornithine activase); Ornithine racemase (EC 5.1.1.12)] Length = 2607 Score = 29.6 bits (65), Expect = 2.9 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = +2 Query: 113 SINQVSIHKQQEQITVLFPLDDRGTHHTGSYLSQLIQ 223 ++N +S+ ++E+ TVL+ +D T H S+L + Sbjct: 1521 TLNDISMLSEEERHTVLYQFNDTNTEHPSGIFSELFE 1557
>CSK22_YEAST (P19454) Casein kinase II subunit alpha' (EC 2.7.11.1) (CK II)| Length = 338 Score = 28.9 bits (63), Expect = 5.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -1 Query: 411 HQDRLTAREAMAHPYF 364 HQ+RLTA+EAM H +F Sbjct: 318 HQERLTAKEAMDHKFF 333
>POP1_SCHPO (P87060) WD-repeat protein pop1| Length = 775 Score = 28.9 bits (63), Expect = 5.0 Identities = 20/99 (20%), Positives = 39/99 (39%) Frame = +3 Query: 21 ESKQLNKXYSLQDSSRTILPNTLHEKCVANFQSIRFPYTNNKSKSQFFSPSTIEAHTTQA 200 + + N+ + + S PN K VA+ + NN +FSP+ + + Sbjct: 149 DGNKKNETFPSTNYSNVFYPNNCDSKEVASETTFSLDAPNNSVNYSYFSPNLLGNDSKTR 208 Query: 201 LTFPS*SNHYRVVIRDKVATRMRLHHALLIQCXSNSPAI 317 +FP S+ ++ LH ++ S +P+I Sbjct: 209 QSFPPHSSS---------SSHNSLHEPVIYDFSSENPSI 238
>CSK2A_CAEEL (P18334) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 360 Score = 28.9 bits (63), Expect = 5.0 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 411 HQDRLTAREAMAHPYFLQV 355 H +RLTA+EAM H YF V Sbjct: 308 HAERLTAQEAMGHEYFRPV 326
>MK14A_CYPCA (Q90336) Mitogen-activated protein kinase 14a (EC 2.7.11.24)| (Mitogen-activated protein kinase p38a) (MAP kinase p38a) (cp38a) Length = 361 Score = 28.5 bits (62), Expect = 6.6 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -1 Query: 402 RLTAREAMAHPYFLQ 358 R+TA EA+AHPYF Q Sbjct: 297 RITAAEALAHPYFAQ 311
>MK14A_BRARE (Q9DGE2) Mitogen-activated protein kinase 14a (EC 2.7.11.24)| (Mitogen-activated protein kinase p38a) (MAP kinase p38a) (zp38a) Length = 361 Score = 28.5 bits (62), Expect = 6.6 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -1 Query: 402 RLTAREAMAHPYFLQ 358 R+TA EA+AHPYF Q Sbjct: 297 RITAAEALAHPYFAQ 311
>PHKG1_HUMAN (Q16816) Phosphorylase b kinase gamma catalytic chain, skeletal| muscle isoform (EC 2.7.11.19) (Phosphorylase kinase gamma subunit 1) Length = 386 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 Query: 408 QDRLTAREAMAHPYFLQVRAAE 343 Q+R TA EA+AHP+F Q E Sbjct: 273 QNRYTAEEALAHPFFQQYLVEE 294
>CSK2A_DICDI (Q02720) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II alpha| subunit) Length = 337 Score = 28.5 bits (62), Expect = 6.6 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = -1 Query: 405 DRLTAREAMAHPYF 364 +RLT REAM HPYF Sbjct: 319 ERLTTREAMEHPYF 332
>DEOC_LACAC (Q5FLZ2) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 237 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 102 HTFHVTCSVILYDCCLVKNXLC*VAXILNSVQP 4 H HV C VI +C L K+ + +A I V+P Sbjct: 122 HENHVPCKVIFENCYLTKDEIKKLAEIAKEVKP 154
>MATK_ARIGL (Q4H1B9) Maturase K (Intron maturase)| Length = 522 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +1 Query: 262 GCGFITRCSFNVQATVLLLLLRASPAVFSGPHLQEVWMCHSFTCSEPVLVNH 417 G G + + + L+L +A P +F G H + +W ++ LVNH Sbjct: 472 GSGLVEEFFIEGEQGLSLILPKAIPFIFQGSHRERIWYLDIIRIND--LVNH 521
>PSBC_SYNP7 (P11004) Photosystem II 44 kDa reaction center protein (P6 protein)| (CP43) Length = 461 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 132 YTNNKSKSQFFSPSTIEAHTTQALTF 209 Y N S+FF P+ EA +QA TF Sbjct: 280 YNNTVYPSEFFGPTAAEASQSQAFTF 305
>ANK1_HUMAN (P16157) Ankyrin-1 (Erythrocyte ankyrin) (Ankyrin-R)| Length = 1880 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = +2 Query: 50 FTRQQSYNITEHVT*KVCCELSINQVSIHKQQEQITVLFPLDD 178 FT +Q +T+ + KV ++ ++ ++ E++TV PL+D Sbjct: 1814 FTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVTVEGPLED 1856 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,864,477 Number of Sequences: 219361 Number of extensions: 1023229 Number of successful extensions: 2922 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2922 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
