| Clone Name | rbags14j20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105618.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C01, full insert sequence Length = 2251 Score = 486 bits (245), Expect = e-134 Identities = 492/575 (85%) Strand = Plus / Minus Query: 88 ctttactttgctttgctcgcagccctctgaccctccaatgttttgtatactttatcaatc 147 |||||||||| |||| ||| ||||||| |||||| | ||| ||||||||| |||||| Sbjct: 2094 ctttactttgatttggcggcaaccctctgttcctccagtttttggtatactttctcaatc 2035 Query: 148 tcaggctgataatacttnngcatgtagtttcttctcttcttcattgttgcagtgaccaaa 207 ||||||| ||||| || |||||| ||||||| |||| |||||||||||||| |||||| Sbjct: 2034 tcaggcttgtaatattttagcatgttgtttcttttctttttcattgttgcagtcaccaaa 1975 Query: 208 tccctttcaatgtcaaaaggtaccgggtccaacattacacctttgatgtactcgaaacct 267 |||||||||| ||||||||| | |||||||| ||||||||||||| ||||| || || Sbjct: 1974 tccctttcaaggtcaaaaggaatagggtccaatattacacctttgacatactcaaatccc 1915 Query: 268 cgtagcttgttcttctgtgcagccgctgcgagctctttaaggatatgctctttaaggcct 327 |||||||||||||| |||| | | | |||||||| ||||||||||||||||||||| Sbjct: 1914 cgtagcttgttctttgctgcaacagattgcagctctttcaggatatgctctttaaggcct 1855 Query: 328 tcagatttgcatatttcactgaaagagcctttgtagccatttgaccctgcccacttcatg 387 ||||| |||||||||||| ||||| || ||| |||||||||| |||||||||||||| Sbjct: 1854 tcagacttgcatatttcagcaaaagaacccttgcagccatttgattctgcccacttcatg 1795 Query: 388 gtgttttcttcatgtgggttaactactgccactaacattgatttgtagctgtccccgtac 447 ||||| ||||||||||| |||||||||||||||||||||||| || |||||||||| || Sbjct: 1794 gtgttctcttcatgtggattaactactgccactaacattgatctgaagctgtccccatat 1735 Query: 448 acccagatatcttcaataattggagggaagacatatactttctccagatactcaactgcg 507 ||||||| |||||||| |||||||||| ||||||||||||||||| || |||||||| Sbjct: 1734 acccagacatcttcaacggttggagggaaaacatatactttctccaggtattcaactgca 1675 Query: 508 acatactccccttgcgatagcttaaatatgttcttcttccggtcgataaccttcaggatt 567 |||||||||||||| || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 1674 acatactccccttgtgacaacttgaatatatttttctttcggtcaattaccttcaggatt 1615 Query: 568 ccatccggggtcatctctccaatgtctcctgtatgaaaccatccatcaaccatgacctcg 627 ||||| | | |||||||||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 1614 ccatctgagttcatctctccaatgtcacctgtgtgaaaccatccatcagccatgacctca 1555 Query: 628 tttgtgagctcaggatttttgtagtacccagtgaa 662 || ||||||||||||||||| ||||| || ||||| Sbjct: 1554 ttcgtgagctcaggatttttatagtatccggtgaa 1520
>dbj|AK069689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030H22, full insert sequence Length = 2378 Score = 486 bits (245), Expect = e-134 Identities = 492/575 (85%) Strand = Plus / Minus Query: 88 ctttactttgctttgctcgcagccctctgaccctccaatgttttgtatactttatcaatc 147 |||||||||| |||| ||| ||||||| |||||| | ||| ||||||||| |||||| Sbjct: 2095 ctttactttgatttggcggcaaccctctgttcctccagtttttggtatactttctcaatc 2036 Query: 148 tcaggctgataatacttnngcatgtagtttcttctcttcttcattgttgcagtgaccaaa 207 ||||||| ||||| || |||||| ||||||| |||| |||||||||||||| |||||| Sbjct: 2035 tcaggcttgtaatattttagcatgttgtttcttttctttttcattgttgcagtcaccaaa 1976 Query: 208 tccctttcaatgtcaaaaggtaccgggtccaacattacacctttgatgtactcgaaacct 267 |||||||||| ||||||||| | |||||||| ||||||||||||| ||||| || || Sbjct: 1975 tccctttcaaggtcaaaaggaatagggtccaatattacacctttgacatactcaaatccc 1916 Query: 268 cgtagcttgttcttctgtgcagccgctgcgagctctttaaggatatgctctttaaggcct 327 |||||||||||||| |||| | | | |||||||| ||||||||||||||||||||| Sbjct: 1915 cgtagcttgttctttgctgcaacagattgcagctctttcaggatatgctctttaaggcct 1856 Query: 328 tcagatttgcatatttcactgaaagagcctttgtagccatttgaccctgcccacttcatg 387 ||||| |||||||||||| ||||| || ||| |||||||||| |||||||||||||| Sbjct: 1855 tcagacttgcatatttcagcaaaagaacccttgcagccatttgattctgcccacttcatg 1796 Query: 388 gtgttttcttcatgtgggttaactactgccactaacattgatttgtagctgtccccgtac 447 ||||| ||||||||||| |||||||||||||||||||||||| || |||||||||| || Sbjct: 1795 gtgttctcttcatgtggattaactactgccactaacattgatctgaagctgtccccatat 1736 Query: 448 acccagatatcttcaataattggagggaagacatatactttctccagatactcaactgcg 507 ||||||| |||||||| |||||||||| ||||||||||||||||| || |||||||| Sbjct: 1735 acccagacatcttcaacggttggagggaaaacatatactttctccaggtattcaactgca 1676 Query: 508 acatactccccttgcgatagcttaaatatgttcttcttccggtcgataaccttcaggatt 567 |||||||||||||| || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 1675 acatactccccttgtgacaacttgaatatatttttctttcggtcaattaccttcaggatt 1616 Query: 568 ccatccggggtcatctctccaatgtctcctgtatgaaaccatccatcaaccatgacctcg 627 ||||| | | |||||||||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 1615 ccatctgagttcatctctccaatgtcacctgtgtgaaaccatccatcagccatgacctca 1556 Query: 628 tttgtgagctcaggatttttgtagtacccagtgaa 662 || ||||||||||||||||| ||||| || ||||| Sbjct: 1555 ttcgtgagctcaggatttttatagtatccggtgaa 1521
>dbj|AK059083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B01, full insert sequence Length = 1617 Score = 416 bits (210), Expect = e-113 Identities = 405/470 (86%) Strand = Plus / Minus Query: 193 gttgcagtgaccaaatccctttcaatgtcaaaaggtaccgggtccaacattacacctttg 252 |||| ||| |||||||||||||||| ||||||||| | |||||||| |||||||||||| Sbjct: 1617 gttgtagtcaccaaatccctttcaaggtcaaaaggaatagggtccaatattacacctttg 1558 Query: 253 atgtactcgaaacctcgtagcttgttcttctgtgcagccgctgcgagctctttaaggata 312 | ||||| || || |||||||||||||| |||| | | | |||||||| |||||| Sbjct: 1557 acatactcaaatccccgtagcttgttctttgctgcaacagattgcagctctttcaggata 1498 Query: 313 tgctctttaaggccttcagatttgcatatttcactgaaagagcctttgtagccatttgac 372 |||||||||||||||||||| |||||||||||| ||||| || ||| |||||||||| Sbjct: 1497 tgctctttaaggccttcagacttgcatatttcagcaaaagaacccttgcagccatttgat 1438 Query: 373 cctgcccacttcatggtgttttcttcatgtgggttaactactgccactaacattgatttg 432 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 1437 tctgcccacttcatggtgttctcttcatgtggattaactactgccactaacattgatctg 1378 Query: 433 tagctgtccccgtacacccagatatcttcaataattggagggaagacatatactttctcc 492 |||||||||| || ||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 1377 aagctgtccccatatacccagacatcttcaacggttggagggaaaacatatactttctcc 1318 Query: 493 agatactcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcg 552 || || |||||||| |||||||||||||| || | ||| ||||| || ||||| ||||| Sbjct: 1317 aggtattcaactgcaacatactccccttgtgacaacttgaatatatttttctttcggtca 1258 Query: 553 ataaccttcaggattccatccggggtcatctctccaatgtctcctgtatgaaaccatcca 612 || ||||||||||||||||| | | |||||||||||||||| ||||| |||||||||||| Sbjct: 1257 attaccttcaggattccatctgagttcatctctccaatgtcacctgtgtgaaaccatcca 1198 Query: 613 tcaaccatgacctcgtttgtgagctcaggatttttgtagtacccagtgaa 662 ||| |||||||||| || ||||||||||||||||| ||||| || ||||| Sbjct: 1197 tcagccatgacctcattcgtgagctcaggatttttatagtatccggtgaa 1148
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 184 bits (93), Expect = 2e-43 Identities = 141/157 (89%) Strand = Plus / Plus Query: 298 agctctttaaggatatgctctttaaggccttcagatttgcatatttcactgaaagagcct 357 |||||||| |||||||||||||||||||||||||| |||||||||||| ||||| || Sbjct: 120029 agctctttcaggatatgctctttaaggccttcagacttgcatatttcagcaaaagaaccc 120088 Query: 358 ttgtagccatttgaccctgcccacttcatggtgttttcttcatgtgggttaactactgcc 417 ||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 120089 ttgcagccatttgattctgcccacttcatggtgttctcttcatgtggattaactactgcc 120148 Query: 418 actaacattgatttgtagctgtccccgtacacccaga 454 |||||||||||| || |||||||||| || ||||||| Sbjct: 120149 actaacattgatctgaagctgtccccatatacccaga 120185 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 467 ttggagggaagacatatactttctccagatactcaactgcgacatactccccttgcgata 526 |||||||||| ||||||||||||||||| || |||||||| |||||||||||||| || | Sbjct: 120294 ttggagggaaaacatatactttctccaggtattcaactgcaacatactccccttgtgaca 120353 Query: 527 gcttaaatatgttcttcttccggtcgataaccttcaggattccatccggggtcatctctc 586 ||| ||||| || ||||| ||||| || ||||||||||||||||| | | ||||||||| Sbjct: 120354 acttgaatatatttttctttcggtcaattaccttcaggattccatctgagttcatctctc 120413 Query: 587 caatgtctcctg 598 ||||||| |||| Sbjct: 120414 caatgtcacctg 120425 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 167 gcatgtagtttcttctcttcttcattgttgcagtgaccaaatccctttcaatgtcaaaag 226 |||||| ||||||| |||| |||||||||||||| |||||||||||||||| |||||||| Sbjct: 119685 gcatgttgtttcttttctttttcattgttgcagtcaccaaatccctttcaaggtcaaaag 119744 Query: 227 gtaccgggtccaacattacacctttgatgtactcgaaacctcgtagct 274 | | |||||||| ||||||||||||| ||||| || || ||||||| Sbjct: 119745 gaatagggtccaatattacacctttgacatactcaaatccccgtagct 119792 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 595 cctgtatgaaaccatccatcaaccatgacctcgtttgtgagctcaggatttttgtagtac 654 ||||| ||||||||||||||| |||||||||| || ||||||||||||||||| ||||| Sbjct: 120496 cctgtgtgaaaccatccatcagccatgacctcattcgtgagctcaggatttttatagtat 120555 Query: 655 ccagtgaa 662 || ||||| Sbjct: 120556 ccggtgaa 120563 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 88 ctttactttgctttgctcgcagccctctgaccctccaatgttttgtatactttatcaatc 147 |||||||||| |||| ||| ||||||| |||||| | ||| ||||||||| |||||| Sbjct: 119497 ctttactttgatttggcggcaaccctctgttcctccagtttttggtatactttctcaatc 119556 Query: 148 tcaggct 154 ||||||| Sbjct: 119557 tcaggct 119563
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 184 bits (93), Expect = 2e-43 Identities = 141/157 (89%) Strand = Plus / Plus Query: 298 agctctttaaggatatgctctttaaggccttcagatttgcatatttcactgaaagagcct 357 |||||||| |||||||||||||||||||||||||| |||||||||||| ||||| || Sbjct: 1807300 agctctttcaggatatgctctttaaggccttcagacttgcatatttcagcaaaagaaccc 1807359 Query: 358 ttgtagccatttgaccctgcccacttcatggtgttttcttcatgtgggttaactactgcc 417 ||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1807360 ttgcagccatttgattctgcccacttcatggtgttctcttcatgtggattaactactgcc 1807419 Query: 418 actaacattgatttgtagctgtccccgtacacccaga 454 |||||||||||| || |||||||||| || ||||||| Sbjct: 1807420 actaacattgatctgaagctgtccccatatacccaga 1807456 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 467 ttggagggaagacatatactttctccagatactcaactgcgacatactccccttgcgata 526 |||||||||| ||||||||||||||||| || |||||||| |||||||||||||| || | Sbjct: 1807565 ttggagggaaaacatatactttctccaggtattcaactgcaacatactccccttgtgaca 1807624 Query: 527 gcttaaatatgttcttcttccggtcgataaccttcaggattccatccggggtcatctctc 586 ||| ||||| || ||||| ||||| || ||||||||||||||||| | | ||||||||| Sbjct: 1807625 acttgaatatatttttctttcggtcaattaccttcaggattccatctgagttcatctctc 1807684 Query: 587 caatgtctcctg 598 ||||||| |||| Sbjct: 1807685 caatgtcacctg 1807696 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 167 gcatgtagtttcttctcttcttcattgttgcagtgaccaaatccctttcaatgtcaaaag 226 |||||| ||||||| |||| |||||||||||||| |||||||||||||||| |||||||| Sbjct: 1806956 gcatgttgtttcttttctttttcattgttgcagtcaccaaatccctttcaaggtcaaaag 1807015 Query: 227 gtaccgggtccaacattacacctttgatgtactcgaaacctcgtagct 274 | | |||||||| ||||||||||||| ||||| || || ||||||| Sbjct: 1807016 gaatagggtccaatattacacctttgacatactcaaatccccgtagct 1807063 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 595 cctgtatgaaaccatccatcaaccatgacctcgtttgtgagctcaggatttttgtagtac 654 ||||| ||||||||||||||| |||||||||| || ||||||||||||||||| ||||| Sbjct: 1807767 cctgtgtgaaaccatccatcagccatgacctcattcgtgagctcaggatttttatagtat 1807826 Query: 655 ccagtgaa 662 || ||||| Sbjct: 1807827 ccggtgaa 1807834 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 88 ctttactttgctttgctcgcagccctctgaccctccaatgttttgtatactttatcaatc 147 |||||||||| |||| ||| ||||||| |||||| | ||| ||||||||| |||||| Sbjct: 1806768 ctttactttgatttggcggcaaccctctgttcctccagtttttggtatactttctcaatc 1806827 Query: 148 tcaggct 154 ||||||| Sbjct: 1806828 tcaggct 1806834 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ttcatggtgttttcttcatg 401 |||||||||||||||||||| Sbjct: 26444608 ttcatggtgttttcttcatg 26444627
>gb|AY110525.1| Zea mays CL10194_1 mRNA sequence Length = 729 Score = 153 bits (77), Expect = 9e-34 Identities = 161/189 (85%) Strand = Plus / Minus Query: 197 cagtgaccaaatccctttcaatgtcaaaaggtaccgggtccaacattacacctttgatgt 256 |||| ||||||||||| || ||||||||||| || || ||||||| ||| |||||||||| Sbjct: 215 cagtcaccaaatccctctcgatgtcaaaaggcacaggatccaacactacgcctttgatgt 156 Query: 257 actcgaaacctcgtagcttgttcttctgtgcagccgctgcgagctctttaaggatatgct 316 ||||||| |||||||||||||||||||| ||| | ||||| |||||||| ||||| | || Sbjct: 155 actcgaagcctcgtagcttgttcttctgcgcaacggctgccagctctttcaggatgtact 96 Query: 317 ctttaaggccttcagatttgcatatttcactgaaagagcctttgtagccatttgaccctg 376 |||| || |||||| |||||| |||||| ||||| || ||||||||||| ||| ||| Sbjct: 95 ctttgagtccttcaagtttgcagatttcatcaaaagaacccttgtagccattggactctg 36 Query: 377 cccacttca 385 ||||||||| Sbjct: 35 cccacttca 27
>gb|DQ174260.1| Gossypium hirsutum ACS-like protein (ACS2) mRNA, complete cds Length = 2296 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 487 ttctccagatactcaactgcgacatactccccttgcgatagcttaaatatgttcttcttc 546 |||||||| | |||||| || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 1610 ttctccaggttctcaacagcaacatattccccttgtgaaagcttaaagatgttcttcttt 1551 Query: 547 cggtcgataaccttcaggattccatccggggtcatctctccaatgtctcctgtatgaaac 606 || || ||||| |||| |||||| || | ||| ||||| || ||||| |||||| Sbjct: 1550 cgatcaataactttcatacttccatttggttgccactcaccaatatcccctgtgtgaaac 1491 Query: 607 catccatcaaccatgacctcgtttgtgag 635 || ||||||| ||||||||| || ||||| Sbjct: 1490 cacccatcaatcatgacctccttggtgag 1462
>gb|DQ174259.1| Gossypium hirsutum ACS-like protein (ACS1) mRNA, complete cds Length = 2196 Score = 56.0 bits (28), Expect = 2e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 487 ttctccagatactcaactgcgacatactccccttgcgatagcttaaatatgttcttcttc 546 |||||||| | |||||| || ||||| || ||||| || |||||||| |||||||||||| Sbjct: 1607 ttctccaggttctcaacagcaacatattcaccttgtgaaagcttaaaaatgttcttcttc 1548 Query: 547 cggtcgataaccttca 562 || || |||| ||||| Sbjct: 1547 cgatcaataatcttca 1532
>dbj|AK060660.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A12, full insert sequence Length = 266 Score = 54.0 bits (27), Expect = 6e-04 Identities = 76/93 (81%) Strand = Plus / Minus Query: 88 ctttactttgctttgctcgcagccctctgaccctccaatgttttgtatactttatcaatc 147 |||||||||| |||| ||| ||||||| |||||| | ||| ||||||||| |||||| Sbjct: 94 ctttactttgatttggcggcaaccctctgttcctccagtttttggtatactttctcaatc 35 Query: 148 tcaggctgataatacttnngcatgtagtttctt 180 ||||||| ||||| || |||||| ||||||| Sbjct: 34 tcaggcttgtaatattttagcatgttgtttctt 2
>gb|AC135465.23| Medicago truncatula clone mth2-24h22, complete sequence Length = 109043 Score = 52.0 bits (26), Expect = 0.002 Identities = 60/72 (83%) Strand = Plus / Minus Query: 153 ctgataatacttnngcatgtagtttcttctcttcttcattgttgcagtgaccaaatccct 212 |||||||||||| |||| | |||||||||||| |||| |||||| || ||||| || || Sbjct: 76002 ctgataatacttgagcatattgtttcttctctttttcaatgttgctgtcaccaagtctct 75943 Query: 213 ttcaatgtcaaa 224 ||| || ||||| Sbjct: 75942 ttccatatcaaa 75931
>ref|NM_192053.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1704 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 586 ccaatgtctcctgtatgaaaccatccatc 614 |||||||||||||| |||||||||||||| Sbjct: 1235 ccaatgtctcctgtgtgaaaccatccatc 1207
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 502 actgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgat 554 ||||| |||||||||||||| || ||||| || ||||||||||| | |||||| Sbjct: 94896 actgctacatactccccttgggacagcttgaaaatgttcttctttctgtcgat 94844
>emb|CT033771.1| Medicago truncatula chromosome 5 clone mth2-15i14, COMPLETE SEQUENCE Length = 116146 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 595 cctgtatgaaaccatccatcaaccatgacctcgtttgtgag 635 |||||||| |||||||||||||||| ||||| |||||||| Sbjct: 27203 cctgtatggaaccatccatcaaccagaacctcttttgtgag 27163 Score = 40.1 bits (20), Expect = 9.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 499 tcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgataacc 558 ||||| || ||||| || ||||| || ||||| ||||| ||||||||||| || |||| | Sbjct: 40420 tcaacggcaacatattctccttgtgaaagcttgaatatattcttcttccgatcaataatc 40361 Query: 559 ttca 562 |||| Sbjct: 40360 ttca 40357 Score = 40.1 bits (20), Expect = 9.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 499 tcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgataacc 558 ||||| || ||||| || ||||| || ||||| ||||| ||||||||||| || |||| | Sbjct: 27405 tcaacggcaacatattctccttgggaaagcttgaatatattcttcttccgatcaataatc 27346 Query: 559 ttca 562 |||| Sbjct: 27345 ttca 27342
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 595 cctgtatgaaaccatccatcaaccatgacctcgtttgtgag 635 |||||||| |||||||||||||||| ||||| |||||||| Sbjct: 113140 cctgtatggaaccatccatcaaccagaacctcttttgtgag 113100 Score = 40.1 bits (20), Expect = 9.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 499 tcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgataacc 558 ||||| || ||||| || ||||| || ||||| ||||| ||||||||||| || |||| | Sbjct: 113342 tcaacggcaacatattctccttgggaaagcttgaatatattcttcttccgatcaataatc 113283 Query: 559 ttca 562 |||| Sbjct: 113282 ttca 113279
>emb|CR859937.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1820 (from clone DKFZp469F1820) Length = 3696 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataaccttca 562 ||||||||||||| ||| ||||||||||||| ||||| Sbjct: 1744 agcttaaatatgtgctttttccggtcgataatcttca 1708
>emb|CR858879.1| Pongo pygmaeus mRNA; cDNA DKFZp469I0926 (from clone DKFZp469I0926) Length = 3793 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataaccttca 562 ||||||||||||| ||| ||||||||||||| ||||| Sbjct: 1837 agcttaaatatgtgctttttccggtcgataatcttca 1801
>emb|CR857134.1| Pongo pygmaeus mRNA; cDNA DKFZp469L0221 (from clone DKFZp469L0221) Length = 3568 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataaccttca 562 ||||||||||||| ||| ||||||||||||| ||||| Sbjct: 1611 agcttaaatatgtgctttttccggtcgataatcttca 1575
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 502 actgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgat 554 ||||| |||||||||||||| || ||||| || ||||||||||| | |||||| Sbjct: 19917829 actgctacatactccccttgggacagcttgaaaatgttcttctttctgtcgat 19917777
>emb|AJ006025.1|CAR6025 Cicer arietinum mRNA for acyl-coA synthetase, partial Length = 802 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 499 tcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgataacc 558 ||||| || ||||| || ||||| || ||||| |||||||| ||||||||||| |||| | Sbjct: 96 tcaacggcaacatattctccttgtgaaagcttgaatatgtttttcttccggtcaataatc 37 Query: 559 ttcaggattccat 571 |||| | |||||| Sbjct: 36 ttcatgcttccat 24
>dbj|AK109777.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B09, full insert sequence Length = 2272 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 502 actgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgat 554 ||||| |||||||||||||| || ||||| || ||||||||||| | |||||| Sbjct: 1693 actgctacatactccccttgggacagcttgaaaatgttcttctttctgtcgat 1641
>dbj|AK101149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A14, full insert sequence Length = 2372 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 586 ccaatgtctcctgtatgaaaccatccatc 614 |||||||||||||| |||||||||||||| Sbjct: 1603 ccaatgtctcctgtgtgaaaccatccatc 1575
>dbj|AK066286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065D12, full insert sequence Length = 2544 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 586 ccaatgtctcctgtatgaaaccatccatc 614 |||||||||||||| |||||||||||||| Sbjct: 1700 ccaatgtctcctgtgtgaaaccatccatc 1672
>gb|AY107541.1| Zea mays PCO126911 mRNA sequence Length = 1353 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 498 ctcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgat 554 ||||||||| ||||||||||| || || ||||| || ||||||||||| | |||||| Sbjct: 743 ctcaactgccacatactccccctgggacagcttgaagatgttcttctttctgtcgat 687
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 502 actgcgacatactccccttgcgatagcttaaatatgttcttcttccggtcgat 554 ||||| |||||||||||||| || ||||| || ||||||||||| | |||||| Sbjct: 20202808 actgctacatactccccttgggacagcttgaaaatgttcttctttctgtcgat 20202756
>ref|XM_517555.1| PREDICTED: Pan troglodytes similar to acyl-CoA synthetase long-chain family member 1; long-chain acyl-CoA synthetase 2; fatty-acid-Coenzyme A ligase, long-chain 2; palmitoyl-CoA ligase 2; long-chain acyl-CoA synthetase 1; paltimoyl-CoA ligase 1; fatty-acid-Coenzyme A ligase,... (LOC461631), mRNA Length = 2233 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1821 agcttaaatatgtgctttttccggtcgataa 1791
>gb|BC026290.1| Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA (cDNA clone IMAGE:4607371), partial cds Length = 3178 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1210 agcttaaatatgtgctttttccggtcgataa 1180
>gb|BC050073.1| Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA (cDNA clone MGC:50988 IMAGE:5267238), complete cds Length = 2347 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1817 agcttaaatatgtgctttttccggtcgataa 1787
>dbj|AK096117.1| Homo sapiens cDNA FLJ38798 fis, clone LIVER2005028, highly similar to LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) Length = 2409 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 473 agcttaaatatgtgctttttccggtcgataa 443
>emb|CR598751.1| full-length cDNA clone CS0DF036YG06 of Fetal brain of Homo sapiens (human) Length = 2153 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 235 agcttaaatatgtgctttttccggtcgataa 205
>emb|CR597120.1| full-length cDNA clone CS0DJ004YA05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2203 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1719 agcttaaatatgtgctttttccggtcgataa 1689
>gb|AC084871.4| Homo sapiens BAC clone RP11-701P16 from 4, complete sequence Length = 203726 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 2849 agcttaaatatgtgctttttccggtcgataa 2879
>dbj|AK067776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K02, full insert sequence Length = 2242 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 586 ccaatgtctcctgtatgaaaccatccatcaa 616 ||||||||||| ||||| ||||||||||||| Sbjct: 1576 ccaatgtctccagtatggaaccatccatcaa 1546
>ref|NM_001995.2| Homo sapiens acyl-CoA synthetase long-chain family member 1 (ACSL1), mRNA Length = 3822 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1863 agcttaaatatgtgctttttccggtcgataa 1833
>gb|L09229.1|HUMFACAL Human long-chain acyl-coenzyme A synthetase (FACL1) mRNA, complete cds Length = 3188 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1761 agcttaaatatgtgctttttccggtcgataa 1731
>dbj|D10040.1|HUMLCACS Homo sapiens mRNA for long-chain acyl-CoA synthetase, complete cds Length = 3634 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 agcttaaatatgttcttcttccggtcgataa 556 ||||||||||||| ||| ||||||||||||| Sbjct: 1698 agcttaaatatgtgctttttccggtcgataa 1668
>ref|NM_117173.1| Arabidopsis thaliana catalytic AT4G11030 mRNA, complete cds Length = 2001 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Minus Query: 498 ctcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtc 551 |||||| ||||||||||| ||||||| || || || |||||||| |||||||| Sbjct: 1599 ctcaacagcgacatactctccttgcgcgagtttgaagatgttctttttccggtc 1546
>gb|AC152121.2| Pichia stipitis clone JGIAHYZ-9D12, complete sequence Length = 37764 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 587 caatgtctcctgtatgaaacca 608 |||||||||||||||||||||| Sbjct: 15737 caatgtctcctgtatgaaacca 15716
>ref|XM_543222.2| PREDICTED: Canis familiaris hypothetical LOC486096 (LOC486096), mRNA Length = 2379 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 478 acatatactttctccagatact 499 |||||||||||||||||||||| Sbjct: 402 acatatactttctccagatact 381
>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30 Length = 198136 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Minus Query: 498 ctcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtc 551 |||||| ||||||||||| ||||||| || || || |||||||| |||||||| Sbjct: 178867 ctcaacagcgacatactctccttgcgcgagtttgaagatgttctttttccggtc 178814
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Minus Query: 498 ctcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtc 551 |||||| ||||||||||| ||||||| || || || |||||||| |||||||| Sbjct: 13264 ctcaacagcgacatactctccttgcgcgagtttgaagatgttctttttccggtc 13211
>gb|AF503755.1| Arabidopsis thaliana long chain acyl-CoA synthetase 5 (LACS5) mRNA, complete cds Length = 2001 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Minus Query: 498 ctcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtc 551 |||||| ||||||||||| ||||||| || || || |||||||| |||||||| Sbjct: 1599 ctcaacagcgacatactctccttgcgcgagtttgaagatgttctttttccggtc 1546
>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 Length = 103673 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Plus Query: 498 ctcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccggtc 551 |||||| ||||||||||| ||||||| || || || |||||||| |||||||| Sbjct: 5882 ctcaacagcgacatactctccttgcgcgagtttgaagatgttctttttccggtc 5935
>dbj|AP004492.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025a, complete sequence Length = 51575 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 595 cctgtatgaaaccatccatcaaccat 620 |||||||| ||||||||||||||||| Sbjct: 24511 cctgtatggaaccatccatcaaccat 24536 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 499 tcaactgcgacatactccccttgcgatagcttaaatatgttcttcttccg 548 ||||| || ||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 24150 tcaacagcaacatattctccttgtgaaagcttaaatatattcttcttccg 24199
>gb|AC099468.9| Rattus norvegicus 1 BAC CH230-37P5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 212177 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 cacatagctttactttgctttgctc 105 |||| |||||||||||||||||||| Sbjct: 115331 cacaaagctttactttgctttgctc 115307
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 gaccaaatccctttcaatgtcaaaa 225 |||| |||||||||||||||||||| Sbjct: 97304 gacccaatccctttcaatgtcaaaa 97328
>ref|NM_001011069.1| Xenopus tropicalis hypothetical LOC496479 (LOC496479), mRNA Length = 2535 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 511 tactccccttgcgatagcttaaatatgttcttcttcc 547 |||||||| |||| | |||||||||||||||||||| Sbjct: 1752 tactccccctgcgccaacttaaatatgttcttcttcc 1716
>gb|BC084450.1| Xenopus tropicalis hypothetical LOC496479, mRNA (cDNA clone MGC:89009 IMAGE:7004438), complete cds Length = 2535 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 511 tactccccttgcgatagcttaaatatgttcttcttcc 547 |||||||| |||| | |||||||||||||||||||| Sbjct: 1752 tactccccctgcgccaacttaaatatgttcttcttcc 1716
>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12 Length = 100815 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 gaccaaatccctttcaatgtcaaaa 225 |||| |||||||||||||||||||| Sbjct: 10220 gacccaatccctttcaatgtcaaaa 10244
>dbj|AP004629.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07I01b, TM0091b, complete sequence Length = 59720 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 595 cctgtatgaaaccatccatcaacca 619 |||||||||||||| |||||||||| Sbjct: 29394 cctgtatgaaaccaaccatcaacca 29370
>ref|NM_103833.3| Arabidopsis thaliana LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) AT1G49430 (LACS2) mRNA, complete cds Length = 2326 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 1661 tctccaatatctcctgtgtggaaccatccatc 1630
>ref|NM_122642.3| Arabidopsis thaliana LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7); catalytic AT5G27600 (LACS7) mRNA, complete cds Length = 2313 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttaaatatgttcttcttcc 547 |||||||||||||||||||| Sbjct: 1662 cttaaatatgttcttcttcc 1643
>ref|XM_467636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1031 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tttcttctcttcttcattgt 194 |||||||||||||||||||| Sbjct: 1010 tttcttctcttcttcattgt 991
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10 map MAP_LOC, complete sequence Length = 102692 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gtttcttctcttcttcattg 193 |||||||||||||||||||| Sbjct: 21718 gtttcttctcttcttcattg 21737
>gb|AY730337.1| Solanum tuberosum strain P6/210 clone BAC BA27c1, complete sequence Length = 91283 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gtttcttctcttcttcattg 193 |||||||||||||||||||| Sbjct: 35190 gtttcttctcttcttcattg 35171
>ref|XM_421026.1| PREDICTED: Gallus gallus insulin-like growth factor 2 (IGF2), mRNA Length = 2280 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 1790 tgcagccgctgcgagctctt 1771
>gb|AY808357.1| Schistosoma japonicum SJCHGC08718 protein mRNA, partial cds Length = 743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tttcttcatgtgggttaact 411 |||||||||||||||||||| Sbjct: 296 tttcttcatgtgggttaact 277
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ttcatggtgttttcttcatg 401 |||||||||||||||||||| Sbjct: 89299 ttcatggtgttttcttcatg 89318
>gb|AC069562.51| Mus musculus strain C57BL/6J clone rp23-317e13 map 13, complete sequence Length = 215278 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tttgtagccatttgaccctg 376 |||||||||||||||||||| Sbjct: 101488 tttgtagccatttgaccctg 101507
>gb|AC156564.3| Mus musculus BAC clone RP24-81G20 from chromosome 8, complete sequence Length = 196445 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 acacatagctttactttgct 99 |||||||||||||||||||| Sbjct: 159862 acacatagctttactttgct 159881
>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence Length = 199600 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 199 gtgaccaaatccctttcaatgtcaaaag 226 ||||| ||||| |||||||||||||||| Sbjct: 85990 gtgacaaaatctctttcaatgtcaaaag 85963
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aatgttttgtatactttatc 143 |||||||||||||||||||| Sbjct: 425653 aatgttttgtatactttatc 425672
>emb|AL162613.22| Human DNA sequence from clone RP11-182C2 on chromosome 10 Contains the 5' end of the ADD3 gene for adducin 3 (gamma) and a CpG island, complete sequence Length = 79949 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ccctttcaatgtcaaaaggt 228 |||||||||||||||||||| Sbjct: 20326 ccctttcaatgtcaaaaggt 20307
>emb|X93347.1|GGMITG Gorilla gorilla gorilla mitochondrial DNA. complete genome Length = 16412 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cctaacaaaacacatagctt 90 |||||||||||||||||||| Sbjct: 10939 cctaacaaaacacatagctt 10958
>gb|AY065424.1| Arabidopsis thaliana putative acyl CoA synthetase (At1g49430) mRNA, complete cds Length = 2317 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 1661 tctccaatatctcctgtgtggaaccatccatc 1630
>emb|AL731800.11| Mouse DNA sequence from clone RP23-358E7 on chromosome 11 Contains the gene for a novel protein, complete sequence Length = 204888 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gatagcttaaatatgttctt 542 |||||||||||||||||||| Sbjct: 169167 gatagcttaaatatgttctt 169186
>gb|AF503757.1| Arabidopsis thaliana long chain acyl-CoA synthetase 7 (LACS7) mRNA, complete cds Length = 2103 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttaaatatgttcttcttcc 547 |||||||||||||||||||| Sbjct: 1662 cttaaatatgttcttcttcc 1643
>gb|AF503752.1| Arabidopsis thaliana long chain acyl-CoA synthetase 2 (LACS2) mRNA, complete cds Length = 1998 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 1517 tctccaatatctcctgtgtggaaccatccatc 1486
>gb|AC117522.2| Homo sapiens chromosome 5 clone RP11-1072N2, complete sequence Length = 170219 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 agcctttgtagccatttgac 372 |||||||||||||||||||| Sbjct: 86360 agcctttgtagccatttgac 86341
>gb|AY094420.1| Arabidopsis thaliana At1g49430/F13F21_14 mRNA, complete cds Length = 2233 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 1598 tctccaatatctcctgtgtggaaccatccatc 1567
>gb|AC068931.6| Homo sapiens chromosome 8, clone RP11-650B11, complete sequence Length = 101474 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aatgttttgtatactttatc 143 |||||||||||||||||||| Sbjct: 31661 aatgttttgtatactttatc 31642
>gb|AC015711.11| Homo sapiens, clone RP11-47G3, complete sequence Length = 172676 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 caaaacacatagctttactttgct 99 |||||||||||||||| ||||||| Sbjct: 163928 caaaacacatagctttgctttgct 163905
>gb|AC097514.3| Homo sapiens BAC clone RP11-425J20 from 4, complete sequence Length = 177027 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 tttgtgagctcaggattttt 647 |||||||||||||||||||| Sbjct: 171680 tttgtgagctcaggattttt 171699
>gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, complete sequence Length = 185255 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 caaaacacatagctttactttgct 99 |||||||||||||||| ||||||| Sbjct: 70990 caaaacacatagctttgctttgct 70967
>ref|XM_695344.1| PREDICTED: Danio rerio similar to Long-chain-fatty-acid--CoA ligase 6 (Long-chain acyl-CoA synthetase 6) (LACS 6) (LOC571726), partial mRNA Length = 992 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 528 cttaaatatgttcttcttccggtcgataaccttcag 563 |||||| |||| ||||||||||||||| | |||||| Sbjct: 585 cttaaagatgtgcttcttccggtcgatgatcttcag 550
>gb|AY829236.1| Meleagris gallopavo insulin-like growth factor-II precursor (IGF-II) mRNA, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 678 tgcagccgctgcgagctctt 659
>gb|AC009772.14| Homo sapiens 12 BAC RP11-372P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tcctgtatgaaaccatccat 613 |||||||||||||||||||| Sbjct: 43765 tcctgtatgaaaccatccat 43746
>gb|S82962.1|S82960S2 prepro-insulin-like growth factor-II [chickens, Genomic, 1513 nt, segment 2 of 2] Length = 1513 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 996 tgcagccgctgcgagctctt 977
>gb|AY267181.1| Gallus gallus insulin-like growth factor 2 (IGF2) mRNA, partial cds Length = 552 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 368 tgcagccgctgcgagctctt 349
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aatgttttgtatactttatc 143 |||||||||||||||||||| Sbjct: 425653 aatgttttgtatactttatc 425672
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tttcttctcttcttcattgt 194 |||||||||||||||||||| Sbjct: 30558367 tttcttctcttcttcattgt 30558386
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cttcatgtgggttaactact 414 |||||||||||||||||||| Sbjct: 25288381 cttcatgtgggttaactact 25288400
>emb|BX817705.1|CNS0AAWU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 764 tctccaatatctcctgtgtggaaccatccatc 733
>emb|BX816967.1|CNS0AAKX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2150 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 1546 tctccaatatctcctgtgtggaaccatccatc 1515
>gb|AF218827.1|AF218827 Gallus gallus insulin-like growth factor-II gene, partial cds Length = 1492 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 988 tgcagccgctgcgagctctt 969
>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158C05 Length = 145514 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cttcatgtgggttaactact 414 |||||||||||||||||||| Sbjct: 85425 cttcatgtgggttaactact 85444
>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 138190 tgcagccgctgcgagctctt 138171
>dbj|AP003795.2| Gallus gallus genomic DNA, chromosome 5, clone:192C9, complete sequence Length = 187259 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagccgctgcgagctctt 304 |||||||||||||||||||| Sbjct: 16415 tgcagccgctgcgagctctt 16396
>gb|AC016041.5|AC016041 Genomic sequence for Arabidopsis thaliana BAC F27J15 from chromosome I, complete sequence Length = 119091 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aatccctttcaatgtcaaaa 225 |||||||||||||||||||| Sbjct: 60028 aatccctttcaatgtcaaaa 60009
>ref|XM_233365.3| PREDICTED: Rattus norvegicus similar to hypothetical protein A430070M19 (LOC313485), mRNA Length = 2685 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tccaacattacacctttgat 254 |||||||||||||||||||| Sbjct: 1604 tccaacattacacctttgat 1585
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tttcttctcttcttcattgt 194 |||||||||||||||||||| Sbjct: 70375 tttcttctcttcttcattgt 70394
>dbj|AK108709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-A10, full insert sequence Length = 1031 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tttcttctcttcttcattgt 194 |||||||||||||||||||| Sbjct: 1010 tttcttctcttcttcattgt 991
>gb|AC024750.1| Caenorhabditis elegans cosmid Y17G9A, complete sequence Length = 41335 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ccaatgttttgtatactttatcaa 145 ||||||||||||||||||| |||| Sbjct: 12134 ccaatgttttgtatactttttcaa 12111
>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17, complete sequence Length = 237313 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgttttgtatactttatcaa 145 |||||||||||||||||||| Sbjct: 145367 tgttttgtatactttatcaa 145386
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttaaatatgttcttcttcc 547 |||||||||||||||||||| Sbjct: 55282 cttaaatatgttcttcttcc 55263
>gb|BT001970.1| Arabidopsis thaliana clone U18235 putative acyl CoA synthetase (At1g49430) mRNA, complete cds Length = 2029 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 tctccaatgtctcctgtatgaaaccatccatc 614 |||||||| |||||||| || ||||||||||| Sbjct: 1517 tctccaatatctcctgtgtggaaccatccatc 1486
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 gtccaacattacacctttgatgta 257 ||||||||||| |||||||||||| Sbjct: 779160 gtccaacattaaacctttgatgta 779137
>dbj|D38114.1|GORMTC Gorilla gorilla mitochondrial DNA, comlete sequence Length = 16364 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cctaacaaaacacatagctt 90 |||||||||||||||||||| Sbjct: 10937 cctaacaaaacacatagctt 10956 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,584,525 Number of Sequences: 3902068 Number of extensions: 6584525 Number of successful extensions: 132158 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131705 Number of HSP's gapped (non-prelim): 453 length of query: 666 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 643 effective length of database: 17,143,297,704 effective search space: 11023140423672 effective search space used: 11023140423672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)