>TSH1_HUMAN (Q6ZSZ6) Teashirt homolog 1 (Serologically defined colon cancer|
            antigen 3) (Antigen NY-CO-33)
          Length = 1077

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -2

Query: 345  GST-QFSIC--TMASKHARNLHVSRVHSKGP 262
            GST Q  +C  T ASKHA  LH+S+ H K P
Sbjct: 1034 GSTFQCKLCNRTFASKHAVKLHLSKTHGKSP 1064

>PHSG_CHLTR (O84250) Glycogen phosphorylase (EC 2.4.1.1)|
          Length = 814

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -2

Query: 204 FFCGMTFLLVRSSADSQLTVGLCGSSLTLVLIHSFVVNYSFDFLLEKHHD 55
           ++  M FLL RS   + L +GL    L LV    F + Y FD L+E  HD
Sbjct: 69  YYISMEFLLGRSLKSNLLNLGL----LDLVKEALFDLGYDFDQLVEMEHD 114

>TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined colon cancer|
            antigen 3 homolog)
          Length = 1084

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -2

Query: 345  GST-QFSIC--TMASKHARNLHVSRVHSKGP 262
            GST Q  +C  T ASKHA  LH+S+ H K P
Sbjct: 1041 GSTFQCKLCNRTFASKHAVKLHLSKTHGKSP 1071

>TSH3_HUMAN (Q63HK5) Teashirt homolog 3 (Zinc finger protein 537)|
          Length = 1081

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -2

Query: 342  STQFSIC--TMASKHARNLHVSRVHSKGP 262
            S Q  +C  T ASKHA  LH+S+ H K P
Sbjct: 1040 SYQCKLCNRTFASKHAVKLHLSKTHGKSP 1068

>UGT50_CAEEL (Q22295) Putative UDP-glucuronosyltransferase ugt-50 precursor (EC|
           2.4.1.17) (UDPGT)
          Length = 525

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 15/22 (68%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = -1

Query: 373 SMKLFVSHLGINSVFH-MYYGV 311
           ++KLFVSH G+NSV   MYYGV
Sbjct: 374 NLKLFVSHGGMNSVLETMYYGV 395

>ELTD1_RAT (Q9ESC1) EGF, latrophilin and seven transmembrane domain-containing|
           protein 1 precursor (EGF-TM7-latrophilin-related
           protein) (ETL protein)
          Length = 738

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 360 NNFIEPSTHEMIRQWGQLPHNDR 428
           NNF+E +THEM   W QLP N R
Sbjct: 247 NNFVEKNTHEM---WDQLPTNRR 266

>ELTD1_MOUSE (Q923X1) EGF, latrophilin seven transmembrane domain-containing|
           protein 1 precursor
          Length = 739

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 360 NNFIEPSTHEMIRQWGQLPHNDR 428
           NNF+E STH+M   W QLP N R
Sbjct: 248 NNFVERSTHKM---WDQLPTNHR 267

>TSH3_MOUSE (Q8CGV9) Teashirt homolog 3 (Zinc finger protein 537)|
          Length = 1081

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 336  QFSIC--TMASKHARNLHVSRVHSKGP 262
            Q  +C  T ASKHA  LH+S+ H K P
Sbjct: 1042 QCKLCNRTFASKHAVKLHLSKTHGKSP 1068

>TSH2_MOUSE (Q68FE9) Teashirt homolog 2 (Zinc finger protein 218) (SDCCAG33-like|
            protein)
          Length = 1030

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 321  TMASKHARNLHVSRVHSKGP 262
            T  SKHA  LH+S+ HSK P
Sbjct: 998  TFVSKHAVKLHLSKTHSKSP 1017

>TSH2_HUMAN (Q9NRE2) Teashirt homolog 2 (Zinc finger protein 218) (Ovarian|
            cancer-related protein 10-2) (OVC10-2)
          Length = 1034

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 321  TMASKHARNLHVSRVHSKGP 262
            T  SKHA  LH+S+ HSK P
Sbjct: 1002 TFVSKHAVKLHLSKTHSKSP 1021

>ERO1_YEAST (Q03103) Endoplasmic oxidoreductin-1 precursor (EC 1.8.4.-)|
           (Endoplasmic oxidoreductase protein 1)
          Length = 563

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = -3

Query: 440 LAEASIIVRELTPLTNHFMCAWFNEV------VRFTSRDQLSFPYVLWRLNMPGIYMF 285
           + +A I+ R      N +  AW  EV       RF  R  L  P  +W L++  +Y F
Sbjct: 480 MPKAEIVPRPSNGTVNKWKKAWNTEVNNVLEAFRFIYRSYLDLPRNIWELSLMKVYKF 537

>PYR1_EMENI (O93937) Protein pyrABCN [Includes: Glutamine-dependent|
            carbamoyl-phosphate (EC 6.3.5.5); Aspartate
            carbamoyltransferase (EC 2.1.3.2)]
          Length = 2275

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 330  SICTMASKHARNLHVSRVHSKGPCEQFRSHKESKTSYTDEFRFFC 196
            S+  +AS H+RN+HV  V SK         KE     T +   +C
Sbjct: 1680 SVLLLASLHSRNIHVMSVTSKEDIGLIALSKEKGLKVTCDVSIYC 1724

>TRBC_ECOLI (P18473) Periplasmic protein trbC precursor|
          Length = 212

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -3

Query: 554 GKAIVQKNKATPEEVKVQLTQYRQDRMPDGKRLHGLKALAEASIIVRELTPLTNHFMCAW 375
           G  +  +N  TPE  +    Q    R    K  H LKA AE  ++   L    NHF+   
Sbjct: 17  GAVMASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFL--- 73

Query: 374 FNEVVR 357
            +E+VR
Sbjct: 74  -DELVR 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,058,359
Number of Sequences: 219361
Number of extensions: 1432717
Number of successful extensions: 3449
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)