ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14j16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191218.1| Oryza sativa (japonica cultivar-group), predic... 355 1e-94
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
3dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
4ref|NM_123630.3| Arabidopsis thaliana unknown protein AT5G42660 ... 48 0.034
5gb|AY124876.1| Arabidopsis thaliana AT5g42660/MJB21_3 mRNA, comp... 48 0.034
6gb|AY057714.1| Arabidopsis thaliana AT5g42660/MJB21_3 mRNA, comp... 48 0.034
7emb|BX832314.1|CNS0A0ZB Arabidopsis thaliana Full-length cDNA Co... 48 0.034
8emb|BX831426.1|CNS09YXY Arabidopsis thaliana Full-length cDNA Co... 48 0.034
9gb|AC122091.6| Rattus norvegicus 9 BAC CH230-375L16 (Children's ... 46 0.14
10gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's ... 46 0.14
11gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete ... 44 0.53
12dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.53
13dbj|AP000684.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 44 0.53
14ref|XM_640077.1| Dictyostelium discoideum hypothetical protein (... 42 2.1
15gb|AC161574.8| Mus musculus chromosome 1, clone RP23-352D14, com... 42 2.1
16gb|U21319.2| Caenorhabditis elegans cosmid C30G12, complete sequ... 42 2.1
17gb|AC121594.3| Mus musculus BAC clone RP23-297A16 from chromosom... 42 2.1
18emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on ch... 42 2.1
19emb|BX640403.5| Zebrafish DNA sequence from clone CH211-133D22 i... 42 2.1
20emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-193I1 ... 42 2.1
21emb|CR956632.4| Pig DNA sequence from clone CH242-197B5 on chrom... 42 2.1
22gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold 42 2.1
23gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence 42 2.1
24gb|AC004918.1| Homo sapiens PAC clone RP5-894A10 from 7, complet... 42 2.1
25ref|NM_063118.1| Caenorhabditis elegans C30G12.3 (C30G12.3) mRNA... 42 2.1
26dbj|AK033727.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 42 2.1
27gb|AC114265.2| Dictyostelium discoideum chromosome 2 map 4520461... 42 2.1
28emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 ... 42 2.1
29gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complet... 42 2.1
30emb|AL359381.8| Mouse DNA sequence from clone CT7-87K14 on chrom... 42 2.1
31gb|CP000015.1| Borrelia garinii PBi plasmid lp54, complete sequence 40 8.3
32gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, com... 40 8.3
33gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete... 40 8.3
34gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
35gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
36emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 40 8.3
37gb|AC158402.6| Mus musculus chromosome 1, clone RP24-328M23, com... 40 8.3
38tpg|BK003211.1| TPA: TPA_inf: Drosophila melanogaster HDC19675 (... 40 8.3
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
40gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complet... 40 8.3
41dbj|AK120867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
42dbj|AK059402.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
43gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 ... 40 8.3
44gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 8.3
45dbj|AB006530.1| Citrullus lanatus Sat gene for serine acetyltran... 40 8.3 
>ref|NM_191218.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1410

 Score =  355 bits (179), Expect = 1e-94
 Identities = 331/384 (86%)
 Strand = Plus / Minus

                                                                        
Query: 222  aagaggttttactttccttgtgtgacctaaactgttcacaaggtcccttcgagtgcacac 281
            ||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 1374 aagaggttttacttttcttgtgtgacccaaactgttcacaagatccctccgagtgcatac 1315

                                                                        
Query: 282  gggaaacatgtagattcctggcatgtttagacgccatagtacatatggaaaactgagttg 341
             | |||||||| |||||||||||||||||| ||||| |  || || ||||||||||||||
Sbjct: 1314 agtaaacatgttgattcctggcatgtttaggcgccacaagacgtacggaaaactgagttg 1255

                                                                        
Query: 342  atcccgagatgtgaaacgaacaacttcattgaaccaagcacacatgaaatgattcgtcaa 401
             || ||||||||||| |||||||||||||||||||| ||||||||||| || ||||||| 
Sbjct: 1254 gtctcgagatgtgaagcgaacaacttcattgaaccaggcacacatgaagtggttcgtcac 1195

                                                                        
Query: 402  tggggtcagctccctcacaatgatagaagcttcagccaaagcttttaatccatgtagtct 461
            ||||| |||||||||||||||||  ||||||||||  ||||||||||| ||||||| |||
Sbjct: 1194 tggggccagctccctcacaatgactgaagcttcagataaagcttttaacccatgtaatct 1135

                                                                        
Query: 462  ttttccgtcaggcattctgtcttgacgatactgagttagctgaacctttacttcttcagg 521
            |||| | || ||||| |  |||| ||||||||||||||  ||||| | ||||||||| ||
Sbjct: 1134 tttttcatctggcatcccatctttacgatactgagttaattgaacttctacttcttctgg 1075

                                                                        
Query: 522  ggtagccttgnnnnnnngtacaatcgctttcccctcatcataaatgttagtccgtgctcc 581
             |||||||||       | ||||| ||||| ||||||||||| |||||| ||||||||||
Sbjct: 1074 agtagccttgtgcttttgaacaatagctttaccctcatcatagatgttactccgtgctcc 1015

                                    
Query: 582  atgttcagaaatagcaaaggtaga 605
            ||||||||||||||||||||||||
Sbjct: 1014 atgttcagaaatagcaaaggtaga 991
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  236 bits (119), Expect = 7e-59
 Identities = 191/215 (88%)
 Strand = Plus / Minus

                                                                            
Query: 222      aagaggttttactttccttgtgtgacctaaactgttcacaaggtcccttcgagtgcacac 281
                ||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 31358412 aagaggttttacttttcttgtgtgacccaaactgttcacaagatccctccgagtgcatac 31358353

                                                                            
Query: 282      gggaaacatgtagattcctggcatgtttagacgccatagtacatatggaaaactgagttg 341
                 | |||||||| |||||||||||||||||| ||||| |  || || ||||||||||||||
Sbjct: 31358352 agtaaacatgttgattcctggcatgtttaggcgccacaagacgtacggaaaactgagttg 31358293

                                                                            
Query: 342      atcccgagatgtgaaacgaacaacttcattgaaccaagcacacatgaaatgattcgtcaa 401
                 || ||||||||||| |||||||||||||||||||| ||||||||||| || ||||||| 
Sbjct: 31358292 gtctcgagatgtgaagcgaacaacttcattgaaccaggcacacatgaagtggttcgtcac 31358233

                                                   
Query: 402      tggggtcagctccctcacaatgatagaagcttcag 436
                ||||| |||||||||||||||||  ||||||||||
Sbjct: 31358232 tggggccagctccctcacaatgactgaagcttcag 31358198



 Score =  123 bits (62), Expect = 7e-25
 Identities = 136/163 (83%)
 Strand = Plus / Minus

                                                                            
Query: 443      cttttaatccatgtagtctttttccgtcaggcattctgtcttgacgatactgagttagct 502
                ||||||| ||||||| ||||||| | || ||||| |  |||| ||||||||||||||  |
Sbjct: 31358054 cttttaacccatgtaatcttttttcatctggcatcccatctttacgatactgagttaatt 31357995

                                                                            
Query: 503      gaacctttacttcttcaggggtagccttgnnnnnnngtacaatcgctttcccctcatcat 562
                |||| | ||||||||| || |||||||||       | ||||| ||||| ||||||||||
Sbjct: 31357994 gaacttctacttcttctggagtagccttgtgcttttgaacaatagctttaccctcatcat 31357935

                                                           
Query: 563      aaatgttagtccgtgctccatgttcagaaatagcaaaggtaga 605
                | |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 31357934 agatgttactccgtgctccatgttcagaaatagcaaaggtaga 31357892



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 86       gaataatttacaacaaaactgtgga 110
                |||||||||||||||||||||||||
Sbjct: 31358548 gaataatttacaacaaaactgtgga 31358524



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 138      ataaaccaacggttagttgactgtccgcagat 169
                ||||| |||||||||||||| |||| ||||||
Sbjct: 31358496 ataaatcaacggttagttgattgtcagcagat 31358465
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>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0481E12
          Length = 161563

 Score =  236 bits (119), Expect = 7e-59
 Identities = 191/215 (88%)
 Strand = Plus / Minus

                                                                          
Query: 222    aagaggttttactttccttgtgtgacctaaactgttcacaaggtcccttcgagtgcacac 281
              ||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 112695 aagaggttttacttttcttgtgtgacccaaactgttcacaagatccctccgagtgcatac 112636

                                                                          
Query: 282    gggaaacatgtagattcctggcatgtttagacgccatagtacatatggaaaactgagttg 341
               | |||||||| |||||||||||||||||| ||||| |  || || ||||||||||||||
Sbjct: 112635 agtaaacatgttgattcctggcatgtttaggcgccacaagacgtacggaaaactgagttg 112576

                                                                          
Query: 342    atcccgagatgtgaaacgaacaacttcattgaaccaagcacacatgaaatgattcgtcaa 401
               || ||||||||||| |||||||||||||||||||| ||||||||||| || ||||||| 
Sbjct: 112575 gtctcgagatgtgaagcgaacaacttcattgaaccaggcacacatgaagtggttcgtcac 112516

                                                 
Query: 402    tggggtcagctccctcacaatgatagaagcttcag 436
              ||||| |||||||||||||||||  ||||||||||
Sbjct: 112515 tggggccagctccctcacaatgactgaagcttcag 112481



 Score =  123 bits (62), Expect = 7e-25
 Identities = 136/163 (83%)
 Strand = Plus / Minus

                                                                          
Query: 443    cttttaatccatgtagtctttttccgtcaggcattctgtcttgacgatactgagttagct 502
              ||||||| ||||||| ||||||| | || ||||| |  |||| ||||||||||||||  |
Sbjct: 112337 cttttaacccatgtaatcttttttcatctggcatcccatctttacgatactgagttaatt 112278

                                                                          
Query: 503    gaacctttacttcttcaggggtagccttgnnnnnnngtacaatcgctttcccctcatcat 562
              |||| | ||||||||| || |||||||||       | ||||| ||||| ||||||||||
Sbjct: 112277 gaacttctacttcttctggagtagccttgtgcttttgaacaatagctttaccctcatcat 112218

                                                         
Query: 563    aaatgttagtccgtgctccatgttcagaaatagcaaaggtaga 605
              | |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 112217 agatgttactccgtgctccatgttcagaaatagcaaaggtaga 112175



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 86     gaataatttacaacaaaactgtgga 110
              |||||||||||||||||||||||||
Sbjct: 112831 gaataatttacaacaaaactgtgga 112807



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 138    ataaaccaacggttagttgactgtccgcagat 169
              ||||| |||||||||||||| |||| ||||||
Sbjct: 112779 ataaatcaacggttagttgattgtcagcagat 112748
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>ref|NM_123630.3| Arabidopsis thaliana unknown protein AT5G42660 mRNA, complete cds
          Length = 1709

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 108/136 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  acgccatagtacatatggaaaactgagttgatcccgagatgtgaaacgaacaacttcatt 371
            |||||| || || ||||| ||||| | |||||| || || ||||| || |||||||||||
Sbjct: 1466 acgccaaagaacgtatgggaaactcaattgatcacgcgaagtgaagcggacaacttcatt 1407

                                                                        
Query: 372  gaaccaagcacacatgaaatgattcgtcaatggggtcagctccctcacaatgatagaagc 431
            ||||||    ||||||||  |||| |||||||| ||  | ||||| ||||| | ||| ||
Sbjct: 1406 gaaccagaggcacatgaatagatttgtcaatggagtgtgttcccttacaatcacagaggc 1347

                            
Query: 432  ttcagccaaagctttt 447
            |||||  |||||||||
Sbjct: 1346 ttcagataaagctttt 1331
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>gb|AY124876.1| Arabidopsis thaliana AT5g42660/MJB21_3 mRNA, complete cds
          Length = 1392

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 108/136 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  acgccatagtacatatggaaaactgagttgatcccgagatgtgaaacgaacaacttcatt 371
            |||||| || || ||||| ||||| | |||||| || || ||||| || |||||||||||
Sbjct: 1287 acgccaaagaacgtatgggaaactcaattgatcacgcgaagtgaagcggacaacttcatt 1228

                                                                        
Query: 372  gaaccaagcacacatgaaatgattcgtcaatggggtcagctccctcacaatgatagaagc 431
            ||||||    ||||||||  |||| |||||||| ||  | ||||| ||||| | ||| ||
Sbjct: 1227 gaaccagaggcacatgaatagatttgtcaatggagtgtgttcccttacaatcacagaggc 1168

                            
Query: 432  ttcagccaaagctttt 447
            |||||  |||||||||
Sbjct: 1167 ttcagataaagctttt 1152
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>gb|AY057714.1| Arabidopsis thaliana AT5g42660/MJB21_3 mRNA, complete cds
          Length = 1617

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 108/136 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  acgccatagtacatatggaaaactgagttgatcccgagatgtgaaacgaacaacttcatt 371
            |||||| || || ||||| ||||| | |||||| || || ||||| || |||||||||||
Sbjct: 1374 acgccaaagaacgtatgggaaactcaattgatcacgcgaagtgaagcggacaacttcatt 1315

                                                                        
Query: 372  gaaccaagcacacatgaaatgattcgtcaatggggtcagctccctcacaatgatagaagc 431
            ||||||    ||||||||  |||| |||||||| ||  | ||||| ||||| | ||| ||
Sbjct: 1314 gaaccagaggcacatgaatagatttgtcaatggagtgtgttcccttacaatcacagaggc 1255

                            
Query: 432  ttcagccaaagctttt 447
            |||||  |||||||||
Sbjct: 1254 ttcagataaagctttt 1239
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>emb|BX832314.1|CNS0A0ZB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH64ZG04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1577

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 108/136 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  acgccatagtacatatggaaaactgagttgatcccgagatgtgaaacgaacaacttcatt 371
            |||||| || || ||||| ||||| | |||||| || || ||||| || |||||||||||
Sbjct: 1392 acgccaaagaacgtatgggaaactcaattgatcacgcgaagtgaagcggacaacttcatt 1333

                                                                        
Query: 372  gaaccaagcacacatgaaatgattcgtcaatggggtcagctccctcacaatgatagaagc 431
            ||||||    ||||||||  |||| |||||||| ||  | ||||| ||||| | ||| ||
Sbjct: 1332 gaaccagaggcacatgaatagatttgtcaatggagtgtgttcccttacaatcacagaggc 1273

                            
Query: 432  ttcagccaaagctttt 447
            |||||  |||||||||
Sbjct: 1272 ttcagataaagctttt 1257
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>emb|BX831426.1|CNS09YXY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS89ZD08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1689

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 108/136 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  acgccatagtacatatggaaaactgagttgatcccgagatgtgaaacgaacaacttcatt 371
            |||||| || || ||||| ||||| | |||||| || || ||||| || |||||||||||
Sbjct: 1468 acgccaaagaacgtatgggaaactcaattgatcacgcgaagtgaagcggacaacttcatt 1409

                                                                        
Query: 372  gaaccaagcacacatgaaatgattcgtcaatggggtcagctccctcacaatgatagaagc 431
            ||||||    ||||||||  |||| |||||||| ||  | ||||| ||||| | ||| ||
Sbjct: 1408 gaaccagaggcacatgaatagatttgtcaatggagtgtgttcccttacaatcacagaggc 1349

                            
Query: 432  ttcagccaaagctttt 447
            |||||  |||||||||
Sbjct: 1348 ttcagataaagctttt 1333
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>gb|AC122091.6| Rattus norvegicus 9 BAC CH230-375L16 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 231967

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 352    gtgaaacgaacaacttcattgaa 374
              |||||||||||||||||||||||
Sbjct: 157920 gtgaaacgaacaacttcattgaa 157942
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>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 217001

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 352    gtgaaacgaacaacttcattgaa 374
              |||||||||||||||||||||||
Sbjct: 164776 gtgaaacgaacaacttcattgaa 164754
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>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 337   agttgatcccgagatgtgaaacgaacaacttcattgaaccaa 378
             |||||||| || ||||| || ||| |||||||||||||||||
Sbjct: 43136 agttgatcacgggatgtaaatcgatcaacttcattgaaccaa 43095
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>dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21
          Length = 78369

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 312   acgccatagtacatatggaaaactgagttgatcccgagatgtgaaacgaacaacttcatt 371
             |||||| || || ||||| ||||| | |||||| || || ||||| || |||||||||||
Sbjct: 10458 acgccaaagaacgtatgggaaactcaattgatcacgcgaagtgaagcggacaacttcatt 10517

                   
Query: 372   gaacca 377
             ||||||
Sbjct: 10518 gaacca 10523
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>dbj|AP000684.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-57N12, complete
             sequences
          Length = 141977

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 74    agaaaatcaaaagaataattta 95
             ||||||||||||||||||||||
Sbjct: 92628 agaaaatcaaaagaataattta 92649
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>ref|XM_640077.1| Dictyostelium discoideum hypothetical protein (DDB0216973), partial
            mRNA
          Length = 3045

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 78   aatcaaaagaataatttacaacaaa 102
            |||||||| ||||||||||||||||
Sbjct: 2224 aatcaaaataataatttacaacaaa 2248
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>gb|AC161574.8| Mus musculus chromosome 1, clone RP23-352D14, complete sequence
          Length = 187614

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     aggagaaaatcaaaagaataa 91
              |||||||||||||||||||||
Sbjct: 120518 aggagaaaatcaaaagaataa 120538
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>gb|U21319.2| Caenorhabditis elegans cosmid C30G12, complete sequence
          Length = 41369

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   tgaaacgaacaacttcattga 373
             |||||||||||||||||||||
Sbjct: 16606 tgaaacgaacaacttcattga 16586
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>gb|AC121594.3| Mus musculus BAC clone RP23-297A16 from chromosome 8, complete sequence
          Length = 209451

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    agaaaatcaaaagaataattt 94
             |||||||||||||||||||||
Sbjct: 82217 agaaaatcaaaagaataattt 82197
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>emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on chromosome 17, complete
              sequence
          Length = 188926

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     aggagaaaatcaaaagaataa 91
              |||||||||||||||||||||
Sbjct: 179184 aggagaaaatcaaaagaataa 179164
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>emb|BX640403.5| Zebrafish DNA sequence from clone CH211-133D22 in linkage group 10,
              complete sequence
          Length = 163035

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 91     atttacaacaaaactgtggat 111
              |||||||||||||||||||||
Sbjct: 104303 atttacaacaaaactgtggat 104283
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>emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-193I1 on chromosome 3,
             complete sequence
          Length = 119364

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    aatcaaaagaataatttacaa 98
             |||||||||||||||||||||
Sbjct: 18571 aatcaaaagaataatttacaa 18551
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>emb|CR956632.4| Pig DNA sequence from clone CH242-197B5 on chromosome 7, complete
             sequence
          Length = 186089

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 575   gtgctccatgttcagaaatag 595
             |||||||||||||||||||||
Sbjct: 86305 gtgctccatgttcagaaatag 86325
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>gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold
          Length = 305394

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 578   ctccatgttcagaaatagcaa 598
             |||||||||||||||||||||
Sbjct: 21188 ctccatgttcagaaatagcaa 21208
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>gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence
          Length = 59818

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 578   ctccatgttcagaaatagcaa 598
             |||||||||||||||||||||
Sbjct: 21188 ctccatgttcagaaatagcaa 21208
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>gb|AC004918.1| Homo sapiens PAC clone RP5-894A10 from 7, complete sequence
          Length = 115371

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    agaaaatcaaaagaataattt 94
             |||||||||||||||||||||
Sbjct: 11279 agaaaatcaaaagaataattt 11299
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>ref|NM_063118.1| Caenorhabditis elegans C30G12.3 (C30G12.3) mRNA, complete cds
          Length = 453

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 353 tgaaacgaacaacttcattga 373
           |||||||||||||||||||||
Sbjct: 234 tgaaacgaacaacttcattga 214
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>dbj|AK033727.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
           library, clone:9130233I07 product:unclassifiable, full
           insert sequence
          Length = 3424

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 284 gaaacatgtagattcctggca 304
           |||||||||||||||||||||
Sbjct: 502 gaaacatgtagattcctggca 522
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>gb|AC114265.2| Dictyostelium discoideum chromosome 2 map 4520461-4544940 strain AX4,
            complete sequence
          Length = 24479

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 78   aatcaaaagaataatttacaacaaa 102
            |||||||| ||||||||||||||||
Sbjct: 7276 aatcaaaataataatttacaacaaa 7252
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>emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 in linkage group 16,
             complete sequence
          Length = 195432

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 378   agcacacatgaaatgattcgtcaat 402
             |||||||||||||||||| ||||||
Sbjct: 72054 agcacacatgaaatgattagtcaat 72030
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>gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complete sequence
          Length = 177652

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 284   gaaacatgtagattcctggca 304
             |||||||||||||||||||||
Sbjct: 34089 gaaacatgtagattcctggca 34109
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>emb|AL359381.8| Mouse DNA sequence from clone CT7-87K14 on chromosome 17, complete
             sequence
          Length = 102917

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    aggagaaaatcaaaagaataa 91
             |||||||||||||||||||||
Sbjct: 20446 aggagaaaatcaaaagaataa 20426
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>gb|CP000015.1| Borrelia garinii PBi plasmid lp54, complete sequence
          Length = 55560

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    aaatcaaaagaataatttac 96
             ||||||||||||||||||||
Sbjct: 50233 aaatcaaaagaataatttac 50214
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>gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, complete sequence
          Length = 158766

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    agaaaatcaaaagaataatt 93
             ||||||||||||||||||||
Sbjct: 45997 agaaaatcaaaagaataatt 45978
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>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence
          Length = 181437

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cgcagaagaatctgaattcg 214
              ||||||||||||||||||||
Sbjct: 131521 cgcagaagaatctgaattcg 131540
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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E05, complete sequence
          Length = 196284

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 339   ttgatcccgagatgtgaaacgaacaacttcattgaaccaa 378
             ||||||||  || ||||||||  |||||||||||||||||
Sbjct: 27876 ttgatccctggaggtgaaacggtcaacttcattgaaccaa 27837
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>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
             complete sequence
          Length = 94399

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 339   ttgatcccgagatgtgaaacgaacaacttcattgaaccaa 378
             ||||||||  || ||||||||  |||||||||||||||||
Sbjct: 94168 ttgatccctggaggtgaaacggtcaacttcattgaaccaa 94129
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 586     tcagaaatagcaaaggtaga 605
               ||||||||||||||||||||
Sbjct: 1420773 tcagaaatagcaaaggtaga 1420792
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>gb|AC158402.6| Mus musculus chromosome 1, clone RP24-328M23, complete sequence
          Length = 176270

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   aagcacacatgaaatgattc 396
             ||||||||||||||||||||
Sbjct: 57674 aagcacacatgaaatgattc 57655
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>tpg|BK003211.1| TPA: TPA_inf: Drosophila melanogaster HDC19675 (HDC19675) gene,
            complete cds
          Length = 1735

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  cgcagaagaatctgaattcg 214
            ||||||||||||||||||||
Sbjct: 1627 cgcagaagaatctgaattcg 1646
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 339      ttgatcccgagatgtgaaacgaacaacttcattgaaccaa 378
                ||||||||  || ||||||||  |||||||||||||||||
Sbjct: 26176828 ttgatccctggaggtgaaacggtcaacttcattgaaccaa 26176789
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>gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complete sequence
          Length = 151242

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   taaggctagaaccacataaa 142
             ||||||||||||||||||||
Sbjct: 55178 taaggctagaaccacataaa 55159
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>dbj|AK120867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I17, full
            insert sequence
          Length = 2267

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 339  ttgatcccgagatgtgaaacgaacaacttcattgaaccaa 378
            ||||||||  || ||||||||  |||||||||||||||||
Sbjct: 1762 ttgatccctggaggtgaaacggtcaacttcattgaaccaa 1723
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>dbj|AK059402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B05, full
           insert sequence
          Length = 795

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 339 ttgatcccgagatgtgaaacgaacaacttcattgaaccaa 378
           ||||||||  || ||||||||  |||||||||||||||||
Sbjct: 290 ttgatccctggaggtgaaacggtcaacttcattgaaccaa 251
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>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete
              sequence
          Length = 297969

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cgcagaagaatctgaattcg 214
              ||||||||||||||||||||
Sbjct: 119903 cgcagaagaatctgaattcg 119922
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>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH015H17, complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aaaatcaaaagaataattta 95
             ||||||||||||||||||||
Sbjct: 98260 aaaatcaaaagaataattta 98279
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>dbj|AB006530.1| Citrullus lanatus Sat gene for serine acetyltransferase, complete
           cds and 5'-flanking region
          Length = 7344

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 75  gaaaatcaaaagaataatttacaa 98
           |||||| |||||||||||||||||
Sbjct: 231 gaaaataaaaagaataatttacaa 254


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,276,321
Number of Sequences: 3902068
Number of extensions: 5276321
Number of successful extensions: 96611
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96439
Number of HSP's gapped (non-prelim): 172
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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