ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
2dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
3dbj|AK100341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
4gb|AY111605.1| Zea mays CL14171_1 mRNA sequence 46 0.15
5ref|XM_810162.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.58
6gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 44 0.58
7gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
8gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
9gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Canc... 42 2.3
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
13gb|AC012668.13| Homo sapiens BAC clone RP11-458D8 from 2, comple... 42 2.3
14dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
15dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
16dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, com... 40 9.1
18ref|XM_469480.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.1
19gb|AC115829.7| Mus musculus chromosome 5, clone RP24-93O11, comp... 40 9.1
20gb|AC109239.8| Mus musculus chromosome 3, clone RP23-191N23, com... 40 9.1
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.1
22gb|AY335881.1| Rhincalanus nasutus 16S ribosomal RNA gene, parti... 40 9.1
23emb|Z48045.1|CEC41C4 Caenorhabditis elegans Cosmid C41C4, comple... 40 9.1
24gb|AC101709.11| Mus musculus chromosome 10, clone RP23-271A21, c... 40 9.1
25gb|AC110221.6| Mus musculus chromosome 3, clone RP24-567P14, com... 40 9.1
26emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chr... 40 9.1
27emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chr... 40 9.1
28emb|AL354938.12| Human DNA sequence from clone RP11-86L19 on chr... 40 9.1
29gb|AC137971.4| Mus musculus, clone RP23-135B1, complete sequence 40 9.1
30emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 40 9.1
31emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 40 9.1
32emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 40 9.1
33gb|AC162913.3| Mus musculus BAC clone RP24-409P22 from chromosom... 40 9.1
34ref|NM_142005.1| Drosophila melanogaster CG14380-RA (CG14380), mRNA 40 9.1
35gb|AF435952.1|AF435952 Caenorhabditis elegans Ser/Thr protein ki... 40 9.1
36gb|AC007754.4|AC007754 Drosophila melanogaster, chromosome 3R, r... 40 9.1
37gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 40 9.1
38dbj|AK043249.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 9.1
39dbj|AK046316.1| Mus musculus adult male corpora quadrigemina cDN... 40 9.1
40ref|NM_063300.3| Caenorhabditis elegans IRE1 kinase related fami... 40 9.1
41gb|BT022565.1| Drosophila melanogaster IP06587 full insert cDNA 40 9.1
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
43gb|AC009211.5|AC009211 Drosophila melanogaster, chromosome 3R, r... 40 9.1
44gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, compl... 40 9.1
45dbj|AK098901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
46dbj|AK067052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
47emb|BX901950.7| Zebrafish DNA sequence from clone DKEY-111C4 in ... 40 9.1
48gb|AE003699.3| Drosophila melanogaster chromosome 3R, section 37... 40 9.1
49gb|AC108398.9| Mus musculus chromosome 13, clone RP24-350L19, co... 40 9.1
50dbj|AK116068.1| Ciona intestinalis cDNA, clone:citb006p20, full ... 40 9.1
51gb|AF032048.1|ALSEB2MP2 Alouatta seniculus beta-2-microglobulin ... 40 9.1
52emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in ... 40 9.1
53emb|AL672144.8| Mouse DNA sequence from clone RP23-40H13 on chro... 40 9.1 
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                            
Query: 510      tgcagcatttgacagagcttggaaccttgctccatctttcctgtcagaggcatattttac 569
                |||||| |||||||||||||| |   ||| |||||| || |||||||| ||||||||  |
Sbjct: 10260040 tgcagcgtttgacagagcttgcagttttggtccatcctttctgtcagaagcatatttagc 10259981

                                      
Query: 570      tgccaagtgcctcaagtctcta 591
                |||||| |||||||||||||||
Sbjct: 10259980 tgccaactgcctcaagtctcta 10259959



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 220      tcaccattcttcaataccaagtgtccatcttcatttgagatgcagatctcagtcacagc 278
                |||||||| ||||| |||||||||||||||||| |  ||||||||| |||||| |||||
Sbjct: 10261625 tcaccatttttcaacaccaagtgtccatcttcagtcaagatgcagacctcagtgacagc 10261567
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>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1540_G08
          Length = 126263

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 510   tgcagcatttgacagagcttggaaccttgctccatctttcctgtcagaggcatattttac 569
             |||||| |||||||||||||| |   ||| |||||| || |||||||| ||||||||  |
Sbjct: 66063 tgcagcgtttgacagagcttgcagttttggtccatcctttctgtcagaagcatatttagc 66004

                                   
Query: 570   tgccaagtgcctcaagtctcta 591
             |||||| |||||||||||||||
Sbjct: 66003 tgccaactgcctcaagtctcta 65982



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220   tcaccattcttcaataccaagtgtccatcttcatttgagatgcagatctcagtcacagc 278
             |||||||| ||||| |||||||||||||||||| |  ||||||||| |||||| |||||
Sbjct: 67648 tcaccatttttcaacaccaagtgtccatcttcagtcaagatgcagacctcagtgacagc 67590
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>dbj|AK100341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082B07, full
           insert sequence
          Length = 3376

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 510 tgcagcatttgacagagcttggaaccttgctccatctttcctgtcagaggcatattttac 569
           |||||| |||||||||||||| |   ||| |||||| || |||||||| ||||||||  |
Sbjct: 952 tgcagcgtttgacagagcttgcagttttggtccatcctttctgtcagaagcatatttagc 893

                                 
Query: 570 tgccaagtgcctcaagtctcta 591
           |||||| |||||||||||||||
Sbjct: 892 tgccaactgcctcaagtctcta 871
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>gb|AY111605.1| Zea mays CL14171_1 mRNA sequence
          Length = 583

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 237 caagtgtccatcttcatttgagatgcagatctcagtcacagcttgatggtactct 291
           |||||| ||||||||  | || ||||||||||| |||||| | ||||||||||||
Sbjct: 365 caagtgcccatcttctgtagaaatgcagatctccgtcacaacctgatggtactct 419
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>ref|XM_810162.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053503939.50) partial mRNA
          Length = 3456

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 327  acaatcaataacttcctgcttc 348
            ||||||||||||||||||||||
Sbjct: 2403 acaatcaataacttcctgcttc 2382
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 96      atctacaaggttcatcatcatatcga 121
               |||| |||||||||||||||||||||
Sbjct: 1973216 atcttcaaggttcatcatcatatcga 1973241
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>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077L08, complete sequence
          Length = 115640

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    gaacacataagagaatgacat 33
             |||||||||||||||||||||
Sbjct: 80661 gaacacataagagaatgacat 80641
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>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0060G17, complete sequence
          Length = 174949

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    gaacacataagagaatgacat 33
             |||||||||||||||||||||
Sbjct: 90753 gaacacataagagaatgacat 90773
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>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 232339

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 546   tttcctgtcagaggcatattttact 570
             |||||||||||||||||||| ||||
Sbjct: 78074 tttcctgtcagaggcatattgtact 78098
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 46       tggttatttaccaccttctgt 66
                |||||||||||||||||||||
Sbjct: 27700093 tggttatttaccaccttctgt 27700113
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 13       gaacacataagagaatgacat 33
                |||||||||||||||||||||
Sbjct: 16715216 gaacacataagagaatgacat 16715196
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 13      gaacacataagagaatgacat 33
               |||||||||||||||||||||
Sbjct: 8001162 gaacacataagagaatgacat 8001182



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 13      gaacacataagagaatgacat 33
               |||||||||||||||||||||
Sbjct: 1901887 gaacacataagagaatgacat 1901867
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>gb|AC012668.13| Homo sapiens BAC clone RP11-458D8 from 2, complete sequence
          Length = 192396

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   tcttcatttgatatgcagatc 181
             |||||||||||||||||||||
Sbjct: 58825 tcttcatttgatatgcagatc 58845
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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0047B07
          Length = 157797

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tggttatttaccaccttctgt 66
              |||||||||||||||||||||
Sbjct: 157086 tggttatttaccaccttctgt 157106
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>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1477_F01
          Length = 158792

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    tggttatttaccaccttctgt 66
             |||||||||||||||||||||
Sbjct: 79195 tggttatttaccaccttctgt 79215
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>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0664F03
          Length = 184242

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    gaacacataagagaatgacat 33
             |||||||||||||||||||||
Sbjct: 66703 gaacacataagagaatgacat 66683
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>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 303    ttttctctttagcagcttcagagc 326
              |||||| |||||||||||||||||
Sbjct: 125109 ttttctttttagcagcttcagagc 125086
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>ref|XM_469480.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1864

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  tttctctttagcagcttcag 323
            ||||||||||||||||||||
Sbjct: 1428 tttctctttagcagcttcag 1409
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>gb|AC115829.7| Mus musculus chromosome 5, clone RP24-93O11, complete sequence
          Length = 128875

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aatgacatgcaatgacaaaa 45
             ||||||||||||||||||||
Sbjct: 32282 aatgacatgcaatgacaaaa 32263
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>gb|AC109239.8| Mus musculus chromosome 3, clone RP23-191N23, complete sequence
          Length = 187162

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 tctctttagcagcttcagag 325
           ||||||||||||||||||||
Sbjct: 198 tctctttagcagcttcagag 179
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 304      tttctctttagcagcttcag 323
                ||||||||||||||||||||
Sbjct: 28239959 tttctctttagcagcttcag 28239978
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>gb|AY335881.1| Rhincalanus nasutus 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 361

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 299 taatttttctctttagcagcttca 322
           |||||||||| |||||||||||||
Sbjct: 195 taatttttctatttagcagcttca 172
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>emb|Z48045.1|CEC41C4 Caenorhabditis elegans Cosmid C41C4, complete sequence
          Length = 39750

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   ttacgagaaagtgatacaca 503
             ||||||||||||||||||||
Sbjct: 14564 ttacgagaaagtgatacaca 14545
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>gb|AC101709.11| Mus musculus chromosome 10, clone RP23-271A21, complete sequence
          Length = 143875

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    tctttctcactaatttttct 308
              ||||||||||||||||||||
Sbjct: 101340 tctttctcactaatttttct 101321
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>gb|AC110221.6| Mus musculus chromosome 3, clone RP24-567P14, complete sequence
          Length = 138203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ccattcttcaataccaagtg 242
             ||||||||||||||||||||
Sbjct: 46683 ccattcttcaataccaagtg 46702



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ccattcttcaataccaagtg 156
             ||||||||||||||||||||
Sbjct: 46683 ccattcttcaataccaagtg 46702
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>emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chromosome X Contains the
             5' end of the PHKA2 gene for phosphorylase kinase, alpha 2
             (liver), the 3' end of the GPR64 gene for G
             protein-coupled receptor 64 and a CpG island, complete
             sequence
          Length = 128189

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   gcatttgacagagcttggaa 533
             ||||||||||||||||||||
Sbjct: 85838 gcatttgacagagcttggaa 85819
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>emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chromosome 13 Contains a
             novel gene, the IRS2 gene for insulin receptor substrate 2
             and two CpG islands, complete sequence
          Length = 143409

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   cttttgaacatataaatcat 442
             ||||||||||||||||||||
Sbjct: 51618 cttttgaacatataaatcat 51637
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>emb|AL354938.12| Human DNA sequence from clone RP11-86L19 on chromosome 9 Contains the
            3' end of the SMC2L1 gene for SMC2 structural maintenance
            of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E), a
            novel pseudogene and a CpG island, complete sequence
          Length = 179738

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  ctcactaatttttctcttta 313
            ||||||||||||||||||||
Sbjct: 2020 ctcactaatttttctcttta 2001
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>gb|AC137971.4| Mus musculus, clone RP23-135B1, complete sequence
          Length = 224801

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aatgacatgcaatgacaaaa 45
              ||||||||||||||||||||
Sbjct: 224144 aatgacatgcaatgacaaaa 224125
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    cttcatttgagatgcagatc 267
              ||||||||||||||||||||
Sbjct: 273849 cttcatttgagatgcagatc 273830
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    cttcatttgagatgcagatc 267
              ||||||||||||||||||||
Sbjct: 270971 cttcatttgagatgcagatc 270952
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    cttcatttgagatgcagatc 267
              ||||||||||||||||||||
Sbjct: 293605 cttcatttgagatgcagatc 293586
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>gb|AC162913.3| Mus musculus BAC clone RP24-409P22 from chromosome 3, complete sequence
          Length = 175922

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   tctctttagcagcttcagag 325
             ||||||||||||||||||||
Sbjct: 48694 tctctttagcagcttcagag 48675
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>ref|NM_142005.1| Drosophila melanogaster CG14380-RA (CG14380), mRNA
          Length = 522

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 297 actaatttttctctttagcagctt 320
           ||||||||| ||||||||||||||
Sbjct: 345 actaattttcctctttagcagctt 368
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>gb|AF435952.1|AF435952 Caenorhabditis elegans Ser/Thr protein kinase (ire1) mRNA, complete
            cds
          Length = 3344

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 484  ttacgagaaagtgatacaca 503
            ||||||||||||||||||||
Sbjct: 1699 ttacgagaaagtgatacaca 1718
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>gb|AC007754.4|AC007754 Drosophila melanogaster, chromosome 3R, region 87E-87E, BAC clone
            BACR05K08, complete sequence
          Length = 188967

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 297  actaatttttctctttagcagctt 320
            ||||||||| ||||||||||||||
Sbjct: 8547 actaattttcctctttagcagctt 8570
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>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
             sequence
          Length = 122497

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   tttctctttagcagcttcag 323
             ||||||||||||||||||||
Sbjct: 91100 tttctctttagcagcttcag 91119
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>dbj|AK043249.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730076A07 product:adenosine
           deaminase 3, RNA dependent, full insert sequence
          Length = 1659

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   attgctaagaacacataaga 24
           ||||||||||||||||||||
Sbjct: 745 attgctaagaacacataaga 726
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>dbj|AK046316.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230369F24 product:similar to
            RIBOSOMAL PROTEIN L27A (RIBOSMAL PROTEIN L27A) [Mus
            musculus], full insert sequence
          Length = 2559

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 303  ttttctctttagcagcttcagagc 326
            |||||| |||||||||||||||||
Sbjct: 2263 ttttctttttagcagcttcagagc 2286
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>ref|NM_063300.3| Caenorhabditis elegans IRE1 kinase related family member (ire-1)
            (ire-1) mRNA, complete cds
          Length = 3306

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 484  ttacgagaaagtgatacaca 503
            ||||||||||||||||||||
Sbjct: 1687 ttacgagaaagtgatacaca 1706
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>gb|BT022565.1| Drosophila melanogaster IP06587 full insert cDNA
          Length = 869

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 297 actaatttttctctttagcagctt 320
           ||||||||| ||||||||||||||
Sbjct: 329 actaattttcctctttagcagctt 352
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 304      tttctctttagcagcttcag 323
                ||||||||||||||||||||
Sbjct: 28331283 tttctctttagcagcttcag 28331302
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>gb|AC009211.5|AC009211 Drosophila melanogaster, chromosome 3R, region 87D11-87E3, BAC clone
              BACR48D15, complete sequence
          Length = 184272

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 297    actaatttttctctttagcagctt 320
              ||||||||| ||||||||||||||
Sbjct: 154883 actaattttcctctttagcagctt 154906
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>gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, complete sequence
          Length = 187806

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    ggaaaagcataatgagacaa 396
              ||||||||||||||||||||
Sbjct: 155911 ggaaaagcataatgagacaa 155930
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>dbj|AK098901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B22, full
            insert sequence
          Length = 2229

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  tttctctttagcagcttcag 323
            ||||||||||||||||||||
Sbjct: 1591 tttctctttagcagcttcag 1572
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>dbj|AK067052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C21, full
            insert sequence
          Length = 2267

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  tttctctttagcagcttcag 323
            ||||||||||||||||||||
Sbjct: 1594 tttctctttagcagcttcag 1575
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>emb|BX901950.7| Zebrafish DNA sequence from clone DKEY-111C4 in linkage group 6,
             complete sequence
          Length = 146043

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   tgctccatctttcctgtcag 556
             ||||||||||||||||||||
Sbjct: 70447 tgctccatctttcctgtcag 70466
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>gb|AE003699.3| Drosophila melanogaster chromosome 3R, section 37 of 118 of the
             complete sequence
          Length = 208424

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   actaatttttctctttagcagctt 320
             ||||||||| ||||||||||||||
Sbjct: 25133 actaattttcctctttagcagctt 25156
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>gb|AC108398.9| Mus musculus chromosome 13, clone RP24-350L19, complete sequence
          Length = 137487

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     attgctaagaacacataaga 24
             ||||||||||||||||||||
Sbjct: 83067 attgctaagaacacataaga 83048
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>dbj|AK116068.1| Ciona intestinalis cDNA, clone:citb006p20, full insert sequence
          Length = 1825

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 36 aatgacaaaatggttattta 55
          ||||||||||||||||||||
Sbjct: 53 aatgacaaaatggttattta 72
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>gb|AF032048.1|ALSEB2MP2 Alouatta seniculus beta-2-microglobulin precursor, gene, exons 2 and
            3 and complete cds
          Length = 1415

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 439  tcatggataggaacagcaac 458
            ||||||||||||||||||||
Sbjct: 984  tcatggataggaacagcaac 1003
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>emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in linkage group 10,
             complete sequence
          Length = 170386

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   agtgtccatcttcatttgag 258
             ||||||||||||||||||||
Sbjct: 24304 agtgtccatcttcatttgag 24285
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>emb|AL672144.8| Mouse DNA sequence from clone RP23-40H13 on chromosome X, complete
             sequence
          Length = 85651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 506   tttgtgcagcatttgacagagctt 529
             |||||||| |||||||||||||||
Sbjct: 64983 tttgtgcaacatttgacagagctt 65006


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,636,361
Number of Sequences: 3902068
Number of extensions: 6636361
Number of successful extensions: 127511
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127089
Number of HSP's gapped (non-prelim): 422
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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